HEADER CYTOKINE 21-SEP-18 6HPI TITLE NMR STRUCTURE OF THE PRO-INFLAMMATORY CYTOKINE INTERLEUKIN-36ALPHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-36 ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FIL1 EPSILON,INTERLEUKIN-1 EPSILON,IL-1 EPSILON,INTERLEUKIN- COMPND 5 1 FAMILY MEMBER 6,IL-1F6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL36A, FIL1E, IL1E, IL1F6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-28A KEYWDS PROTEIN INTERLEUKIN-1 SUPERFAMILY BETA-TREFOIL HEME-BINDING, CYTOKINE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR O.OHLENSCHLAEGER,D.IMHOF REVDAT 2 14-JUN-23 6HPI 1 REMARK REVDAT 1 02-OCT-19 6HPI 0 JRNL AUTH N.GORADIA,A.WISSBROCK,C.WIEDEMANN,F.BORDUSA,R.RAMACHANDRAN, JRNL AUTH 2 D.IMHOF,O.OHLENSCHLAEGER JRNL TITL (1)H, (13)C, AND (15)N RESONANCE ASSIGNMENTS FOR THE JRNL TITL 2 PRO-INFLAMMATORY CYTOKINE INTERLEUKIN-36ALPHA. JRNL REF BIOMOL NMR ASSIGN V. 10 329 2016 JRNL REFN ESSN 1874-270X JRNL DOI 10.1007/S12104-016-9694-7 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPALP REMARK 3 AUTHORS : LUGINBUHL, GUNTERT, BILLETER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ENERGY MINIMISATION REMARK 4 REMARK 4 6HPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200011978. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 273 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.3 MM [U-100% 13C; U-100% 15N] REMARK 210 INTERLEUKIN-36ALPHA, 20 MM NO REMARK 210 SODIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O; 1.3 MM [U-100% 15N] REMARK 210 INTERLEUKIN-36ALPHA, 20 MM NO REMARK 210 SODIUM PHOSPHATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, CCPNMR ANALYSIS REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 4 ARG A 50 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 11 ARG A 21 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 11 ARG A 50 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 3 -92.83 -78.95 REMARK 500 1 ILE A 15 -13.80 -145.18 REMARK 500 1 ASN A 19 31.54 -148.41 REMARK 500 1 ARG A 35 78.41 -159.67 REMARK 500 1 ARG A 38 30.30 -85.68 REMARK 500 1 ASN A 71 72.41 60.94 REMARK 500 1 ASP A 81 -57.03 -131.48 REMARK 500 1 LYS A 88 -48.70 -146.69 REMARK 500 1 ARG A 114 13.76 56.51 REMARK 500 1 SER A 131 63.60 61.19 REMARK 500 1 GLU A 133 -106.64 -82.01 REMARK 500 2 LYS A 3 29.48 -75.52 REMARK 500 2 LYS A 6 -35.18 -157.74 REMARK 500 2 ASP A 8 26.61 48.12 REMARK 500 2 ILE A 15 -19.07 -141.98 REMARK 500 2 ASN A 19 26.48 -140.64 REMARK 500 2 GLN A 28 8.70 57.30 REMARK 500 2 LYS A 36 -162.44 -167.92 REMARK 500 2 ASP A 37 -50.56 -122.81 REMARK 500 2 ARG A 38 20.66 -66.13 REMARK 500 2 SER A 40 128.34 -174.24 REMARK 500 2 LEU A 70 19.84 -153.01 REMARK 500 2 ASN A 71 62.10 62.51 REMARK 500 2 LYS A 88 -42.91 -171.66 REMARK 500 2 PRO A 99 -161.65 -74.66 REMARK 500 2 GLU A 100 70.75 77.46 REMARK 500 2 ARG A 114 -10.37 67.39 REMARK 500 2 SER A 131 87.00 60.90 REMARK 500 2 GLU A 143 100.75 -161.21 REMARK 500 2 PHE A 152 -135.75 -163.49 REMARK 500 2 THR A 155 34.72 -79.42 REMARK 500 3 LYS A 3 44.21 -82.69 REMARK 500 3 ALA A 4 42.57 40.00 REMARK 500 3 LEU A 5 -177.92 -69.21 REMARK 500 3 ASP A 17 -2.80 -51.91 REMARK 500 3 ILE A 18 -80.46 -93.07 REMARK 500 3 HIS A 51 41.80 -105.11 REMARK 500 3 LEU A 70 30.03 -148.01 REMARK 500 3 ASN A 71 74.92 51.32 REMARK 500 3 VAL A 79 38.18 -92.37 REMARK 500 3 LYS A 88 -25.58 -171.54 REMARK 500 3 PRO A 99 38.49 -75.09 REMARK 500 3 ARG A 114 -0.60 67.71 REMARK 500 3 GLU A 133 -83.11 -96.01 REMARK 500 3 GLU A 143 62.28 -169.90 REMARK 500 3 ASN A 148 -156.62 -131.01 REMARK 500 3 PHE A 152 -133.37 -157.94 REMARK 500 3 THR A 155 32.36 -91.39 REMARK 500 4 LYS A 6 18.88 48.74 REMARK 500 4 GLN A 28 17.91 55.29 REMARK 500 REMARK 500 THIS ENTRY HAS 308 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 35 0.10 SIDE CHAIN REMARK 500 1 ARG A 59 0.10 SIDE CHAIN REMARK 500 1 TYR A 96 0.08 SIDE CHAIN REMARK 500 2 ARG A 50 0.08 SIDE CHAIN REMARK 500 5 ARG A 59 0.12 SIDE CHAIN REMARK 500 6 ARG A 59 0.11 SIDE CHAIN REMARK 500 8 PHE A 107 0.09 SIDE CHAIN REMARK 500 9 ARG A 21 0.08 SIDE CHAIN REMARK 500 9 ARG A 35 0.08 SIDE CHAIN REMARK 500 12 PHE A 118 0.08 SIDE CHAIN REMARK 500 13 ARG A 50 0.10 SIDE CHAIN REMARK 500 13 ARG A 59 0.08 SIDE CHAIN REMARK 500 14 ARG A 50 0.09 SIDE CHAIN REMARK 500 14 ARG A 114 0.14 SIDE CHAIN REMARK 500 17 ASP A 27 0.08 SIDE CHAIN REMARK 500 18 ARG A 114 0.08 SIDE CHAIN REMARK 500 19 ARG A 50 0.12 SIDE CHAIN REMARK 500 20 TYR A 96 0.10 SIDE CHAIN REMARK 500 20 TYR A 108 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 26780 RELATED DB: BMRB DBREF 6HPI A 1 158 UNP Q9UHA7 IL36A_HUMAN 1 158 SEQRES 1 A 158 MET GLU LYS ALA LEU LYS ILE ASP THR PRO GLN GLN GLY SEQRES 2 A 158 SER ILE GLN ASP ILE ASN HIS ARG VAL TRP VAL LEU GLN SEQRES 3 A 158 ASP GLN THR LEU ILE ALA VAL PRO ARG LYS ASP ARG MET SEQRES 4 A 158 SER PRO VAL THR ILE ALA LEU ILE SER CYS ARG HIS VAL SEQRES 5 A 158 GLU THR LEU GLU LYS ASP ARG GLY ASN PRO ILE TYR LEU SEQRES 6 A 158 GLY LEU ASN GLY LEU ASN LEU CYS LEU MET CYS ALA LYS SEQRES 7 A 158 VAL GLY ASP GLN PRO THR LEU GLN LEU LYS GLU LYS ASP SEQRES 8 A 158 ILE MET ASP LEU TYR ASN GLN PRO GLU PRO VAL LYS SER SEQRES 9 A 158 PHE LEU PHE TYR HIS SER GLN SER GLY ARG ASN SER THR SEQRES 10 A 158 PHE GLU SER VAL ALA PHE PRO GLY TRP PHE ILE ALA VAL SEQRES 11 A 158 SER SER GLU GLY GLY CYS PRO LEU ILE LEU THR GLN GLU SEQRES 12 A 158 LEU GLY LYS ALA ASN THR THR ASP PHE GLY LEU THR MET SEQRES 13 A 158 LEU PHE HELIX 1 AA1 ILE A 15 ASN A 19 5 5 HELIX 2 AA2 HIS A 51 LEU A 55 5 5 HELIX 3 AA3 ASP A 91 GLN A 98 1 8 SHEET 1 AA1 4 LEU A 72 CYS A 73 0 SHEET 2 AA1 4 PRO A 62 ASN A 68 -1 N LEU A 67 O LEU A 72 SHEET 3 AA1 4 PHE A 107 GLN A 111 -1 O PHE A 107 N ILE A 63 SHEET 4 AA1 4 SER A 116 SER A 120 -1 O GLU A 119 N TYR A 108 SHEET 1 AA2 5 LEU A 72 CYS A 73 0 SHEET 2 AA2 5 PRO A 62 ASN A 68 -1 N LEU A 67 O LEU A 72 SHEET 3 AA2 5 THR A 43 SER A 48 -1 N ALA A 45 O GLY A 66 SHEET 4 AA2 5 GLN A 11 SER A 14 -1 N GLN A 11 O LEU A 46 SHEET 5 AA2 5 THR A 155 LEU A 157 -1 O THR A 155 N SER A 14 SHEET 1 AA3 2 TRP A 23 GLN A 26 0 SHEET 2 AA3 2 THR A 29 ALA A 32 -1 O THR A 29 N GLN A 26 SHEET 1 AA4 2 CYS A 76 LYS A 78 0 SHEET 2 AA4 2 PRO A 83 LEU A 85 -1 O THR A 84 N ALA A 77 SHEET 1 AA5 2 PHE A 127 ALA A 129 0 SHEET 2 AA5 2 ILE A 139 THR A 141 -1 O THR A 141 N PHE A 127 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1