data_6HU6 # _entry.id 6HU6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6HU6 pdb_00006hu6 10.2210/pdb6hu6/pdb WWPDB D_1200012304 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-11-21 2 'Structure model' 1 1 2018-11-28 3 'Structure model' 1 2 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' citation 6 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.journal_volume' 3 2 'Structure model' '_citation.page_first' 4 2 'Structure model' '_citation.page_last' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation_author.identifier_ORCID' 8 3 'Structure model' '_citation.country' 9 3 'Structure model' '_database_2.pdbx_DOI' 10 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HU6 _pdbx_database_status.recvd_initial_deposition_date 2018-10-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Emmerich, C.' 1 ? 'Lazzaretti, D.' 2 0000-0002-5372-9343 'Bandholz-Cajamarca, L.' 3 ? 'Bono, F.' 4 0000-0003-0563-1840 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Life Sci Alliance' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2575-1077 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1 _citation.language ? _citation.page_first e201800187 _citation.page_last e201800187 _citation.title 'The crystal structure of Staufen1 in complex with a physiological RNA sheds light on substrate selectivity.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.26508/lsa.201800187 _citation.pdbx_database_id_PubMed 30456389 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lazzaretti, D.' 1 0000-0002-5372-9343 primary 'Bandholz-Cajamarca, L.' 2 ? primary 'Emmerich, C.' 3 ? primary 'Schaaf, K.' 4 ? primary 'Basquin, C.' 5 ? primary 'Irion, U.' 6 0000-0003-2823-5840 primary 'Bono, F.' 7 0000-0003-0563-1840 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (19-MER)' 6092.688 1 ? ? ? ? 2 polymer syn 'RNA (19-MER)' 6071.617 1 ? ? ? ? 3 polymer syn ;RNA (5'-R(*GP*AP*GP*UP*GP*CP*CP*AP*GP*A)-3') ; 3240.012 1 ? ? ? ? 4 polymer syn ;RNA (5'-R(*CP*UP*GP*GP*UP*AP*CP*UP*C)-3') ; 2808.703 1 ? ? ? ? 5 non-polymer syn 'AMMONIUM ION' 18.038 3 ? ? ? ? 6 water nat water 18.015 40 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAGUGCCAGAAGCUGCCUC GAGUGCCAGAAGCUGCCUC A ? 2 polyribonucleotide no no GAGGCAGUUUCUGGUACUC GAGGCAGUUUCUGGUACUC E ? 3 polyribonucleotide no no GAGUGCCAGA GAGUGCCAGA B ? 4 polyribonucleotide no no CUGGUACUC CUGGUACUC F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'AMMONIUM ION' NH4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 G n 1 4 U n 1 5 G n 1 6 C n 1 7 C n 1 8 A n 1 9 G n 1 10 A n 1 11 A n 1 12 G n 1 13 C n 1 14 U n 1 15 G n 1 16 C n 1 17 C n 1 18 U n 1 19 C n 2 1 G n 2 2 A n 2 3 G n 2 4 G n 2 5 C n 2 6 A n 2 7 G n 2 8 U n 2 9 U n 2 10 U n 2 11 C n 2 12 U n 2 13 G n 2 14 G n 2 15 U n 2 16 A n 2 17 C n 2 18 U n 2 19 C n 3 1 G n 3 2 A n 3 3 G n 3 4 U n 3 5 G n 3 6 C n 3 7 C n 3 8 A n 3 9 G n 3 10 A n 4 1 C n 4 2 U n 4 3 G n 4 4 G n 4 5 U n 4 6 A n 4 7 C n 4 8 U n 4 9 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 19 'Homo sapiens' ? 9606 ? 2 1 sample 1 19 'Homo sapiens' ? 9606 ? 3 1 sample 1 10 'Homo sapiens' ? 9606 ? 4 1 sample 1 9 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 75 75 G G A . n A 1 2 A 2 76 76 A A A . n A 1 3 G 3 77 77 G G A . n A 1 4 U 4 78 78 U U A . n A 1 5 G 5 79 79 G G A . n A 1 6 C 6 80 80 C C A . n A 1 7 C 7 81 81 C C A . n A 1 8 A 8 82 82 A A A . n A 1 9 G 9 83 83 G G A . n A 1 10 A 10 84 84 A A A . n A 1 11 A 11 85 85 A A A . n A 1 12 G 12 86 86 G G A . n A 1 13 C 13 87 87 C C A . n A 1 14 U 14 88 88 U U A . n A 1 15 G 15 89 89 G G A . n A 1 16 C 16 90 90 C C A . n A 1 17 C 17 91 91 C C A . n A 1 18 U 18 92 92 U U A . n A 1 19 C 19 93 93 C C A . n B 2 1 G 1 194 194 G G E . n B 2 2 A 2 195 195 A A E . n B 2 3 G 3 196 196 G G E . n B 2 4 G 4 197 197 G G E . n B 2 5 C 5 198 198 C C E . n B 2 6 A 6 199 199 A A E . n B 2 7 G 7 200 200 G G E . n B 2 8 U 8 201 201 U U E . n B 2 9 U 9 202 202 U U E . n B 2 10 U 10 203 203 U U E . n B 2 11 C 11 204 204 C C E . n B 2 12 U 12 205 205 U U E . n B 2 13 G 13 206 206 G G E . n B 2 14 G 14 207 207 G G E . n B 2 15 U 15 208 208 U U E . n B 2 16 A 16 209 209 A A E . n B 2 17 C 17 210 210 C C E . n B 2 18 U 18 211 211 U U E . n B 2 19 C 19 212 212 C C E . n C 3 1 G 1 75 75 G G B . n C 3 2 A 2 76 76 A A B . n C 3 3 G 3 77 77 G G B . n C 3 4 U 4 78 78 U U B . n C 3 5 G 5 79 79 G G B . n C 3 6 C 6 80 80 C C B . n C 3 7 C 7 81 81 C C B . n C 3 8 A 8 82 82 A A B . n C 3 9 G 9 83 83 G G B . n C 3 10 A 10 84 84 A A B . n D 4 1 C 1 204 204 C C F . n D 4 2 U 2 205 205 U U F . n D 4 3 G 3 206 206 G G F . n D 4 4 G 4 207 207 G G F . n D 4 5 U 5 208 208 U U F . n D 4 6 A 6 209 209 A A F . n D 4 7 C 7 210 210 C C F . n D 4 8 U 8 211 211 U U F . n D 4 9 C 9 212 212 C C F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NH4 1 101 2 NH4 NH4 A . F 5 NH4 1 102 3 NH4 NH4 A . G 5 NH4 1 101 1 NH4 NH4 B . H 6 HOH 1 201 22 HOH HOH A . H 6 HOH 2 202 30 HOH HOH A . I 6 HOH 1 301 19 HOH HOH E . I 6 HOH 2 302 21 HOH HOH E . I 6 HOH 3 303 38 HOH HOH E . J 6 HOH 1 201 23 HOH HOH B . J 6 HOH 2 202 17 HOH HOH B . J 6 HOH 3 203 14 HOH HOH B . J 6 HOH 4 204 5 HOH HOH B . J 6 HOH 5 205 13 HOH HOH B . J 6 HOH 6 206 11 HOH HOH B . J 6 HOH 7 207 28 HOH HOH B . J 6 HOH 8 208 24 HOH HOH B . J 6 HOH 9 209 4 HOH HOH B . J 6 HOH 10 210 6 HOH HOH B . J 6 HOH 11 211 8 HOH HOH B . J 6 HOH 12 212 25 HOH HOH B . J 6 HOH 13 213 9 HOH HOH B . J 6 HOH 14 214 27 HOH HOH B . J 6 HOH 15 215 29 HOH HOH B . J 6 HOH 16 216 2 HOH HOH B . J 6 HOH 17 217 34 HOH HOH B . J 6 HOH 18 218 41 HOH HOH B . J 6 HOH 19 219 26 HOH HOH B . J 6 HOH 20 220 37 HOH HOH B . J 6 HOH 21 221 31 HOH HOH B . J 6 HOH 22 222 12 HOH HOH B . J 6 HOH 23 223 18 HOH HOH B . J 6 HOH 24 224 39 HOH HOH B . J 6 HOH 25 225 20 HOH HOH B . K 6 HOH 1 301 7 HOH HOH F . K 6 HOH 2 302 10 HOH HOH F . K 6 HOH 3 303 1 HOH HOH F . K 6 HOH 4 304 33 HOH HOH F . K 6 HOH 5 305 3 HOH HOH F . K 6 HOH 6 306 35 HOH HOH F . K 6 HOH 7 307 16 HOH HOH F . K 6 HOH 8 308 15 HOH HOH F . K 6 HOH 9 309 36 HOH HOH F . K 6 HOH 10 310 32 HOH HOH F . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6HU6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.803 _cell.length_a_esd ? _cell.length_b 43.803 _cell.length_b_esd ? _cell.length_c 452.087 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HU6 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.7 M (NH4)2SO4, 100 mM Tri-sodium citrate pH 6.2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-10-24 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6HU6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 38 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 25323 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.52 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.02 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HU6 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.904 _refine.ls_d_res_low 37.802 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13826 _refine.ls_number_reflns_R_free 693 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.44 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2274 _refine.ls_R_factor_R_free 0.2488 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2262 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.17 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.27 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1207 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 1250 _refine_hist.d_res_high 1.904 _refine_hist.d_res_low 37.802 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.019 ? 1346 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.407 ? 2091 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.348 ? 669 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.099 ? 282 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.014 ? 57 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.9043 2.0513 . . 134 2540 100.00 . . . 0.3203 . 0.3026 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0513 2.2577 . . 136 2578 100.00 . . . 0.3641 . 0.2750 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2577 2.5844 . . 138 2609 100.00 . . . 0.3703 . 0.2995 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5844 3.2558 . . 137 2602 99.00 . . . 0.2853 . 0.2696 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2558 37.8091 . . 148 2804 99.00 . . . 0.1844 . 0.1773 . . . . . . . . . . # _struct.entry_id 6HU6 _struct.title 'Structure of ARF1 RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HU6 _struct_keywords.text 'dsRBD, RNA localization, SMD, Staufen, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6HU6 6HU6 ? 1 ? 1 2 PDB 6HU6 6HU6 ? 2 ? 1 3 PDB 6HU6 6HU6 ? 3 ? 1 4 PDB 6HU6 6HU6 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6HU6 A 1 ? 19 ? 6HU6 75 ? 93 ? 75 93 2 2 6HU6 E 1 ? 19 ? 6HU6 194 ? 212 ? 194 212 3 3 6HU6 B 1 ? 10 ? 6HU6 75 ? 84 ? 75 84 4 4 6HU6 F 1 ? 9 ? 6HU6 204 ? 212 ? 204 212 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3390 ? 1 MORE -9 ? 1 'SSA (A^2)' 10270 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 19 N3 ? ? A G 75 E C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 19 O2 ? ? A G 75 E C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 19 N4 ? ? A G 75 E C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B U 18 N3 ? ? A A 76 E U 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B U 18 O4 ? ? A A 76 E U 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 17 N3 ? ? A G 77 E C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 17 O2 ? ? A G 77 E C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 17 N4 ? ? A G 77 E C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 B A 16 N1 ? ? A U 78 E A 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 B A 16 N6 ? ? A U 78 E A 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 B U 15 O2 ? ? A G 79 E U 208 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog12 hydrog ? ? A G 5 O6 ? ? ? 1_555 B U 15 N3 ? ? A G 79 E U 208 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 14 N1 ? ? A C 80 E G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 14 O6 ? ? A C 80 E G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 14 N2 ? ? A C 80 E G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 13 N1 ? ? A C 81 E G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 13 O6 ? ? A C 81 E G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 13 N2 ? ? A C 81 E G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 8 N1 ? ? ? 1_555 B U 12 N3 ? ? A A 82 E U 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 8 N6 ? ? ? 1_555 B U 12 O4 ? ? A A 82 E U 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 11 N3 ? ? A G 83 E C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 N2 ? ? ? 1_555 B C 11 O2 ? ? A G 83 E C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 O6 ? ? ? 1_555 B C 11 N4 ? ? A G 83 E C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A A 10 N1 ? ? ? 1_555 B U 10 N3 ? ? A A 84 E U 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 10 N6 ? ? ? 1_555 B U 10 O4 ? ? A A 84 E U 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 11 N1 ? ? ? 1_555 B U 9 N3 ? ? A A 85 E U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 11 N6 ? ? ? 1_555 B U 9 O4 ? ? A A 85 E U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 12 N1 ? ? ? 1_555 B U 8 O2 ? ? A G 86 E U 201 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? A G 12 O6 ? ? ? 1_555 B U 8 N3 ? ? A G 86 E U 201 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? A C 13 N3 ? ? ? 1_555 B G 7 N1 ? ? A C 87 E G 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 13 N4 ? ? ? 1_555 B G 7 O6 ? ? A C 87 E G 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 13 O2 ? ? ? 1_555 B G 7 N2 ? ? A C 87 E G 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 14 N3 ? ? ? 1_555 B A 6 N1 ? ? A U 88 E A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 14 O4 ? ? ? 1_555 B A 6 N6 ? ? A U 88 E A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 15 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 89 E C 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 15 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 89 E C 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 15 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 89 E C 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 16 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 90 E G 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 16 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 90 E G 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 16 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 90 E G 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 17 N3 ? ? ? 1_555 B G 3 N1 ? ? A C 91 E G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 17 N4 ? ? ? 1_555 B G 3 O6 ? ? A C 91 E G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 17 O2 ? ? ? 1_555 B G 3 N2 ? ? A C 91 E G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 18 N3 ? ? ? 1_555 B A 2 N1 ? ? A U 92 E A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 18 O4 ? ? ? 1_555 B A 2 N6 ? ? A U 92 E A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 19 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 93 E G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 19 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 93 E G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 19 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 93 E G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 9 N3 ? ? B G 75 F C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 9 O2 ? ? B G 75 F C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 9 N4 ? ? B G 75 F C 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C A 2 N1 ? ? ? 1_555 D U 8 N3 ? ? B A 76 F U 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C A 2 N6 ? ? ? 1_555 D U 8 O4 ? ? B A 76 F U 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 3 N1 ? ? ? 1_555 D C 7 N3 ? ? B G 77 F C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C G 3 N2 ? ? ? 1_555 D C 7 O2 ? ? B G 77 F C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C G 3 O6 ? ? ? 1_555 D C 7 N4 ? ? B G 77 F C 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C U 4 N3 ? ? ? 1_555 D A 6 N1 ? ? B U 78 F A 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C U 4 O4 ? ? ? 1_555 D A 6 N6 ? ? B U 78 F A 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C G 5 N1 ? ? ? 1_555 D U 5 O2 ? ? B G 79 F U 208 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog60 hydrog ? ? C G 5 O6 ? ? ? 1_555 D U 5 N3 ? ? B G 79 F U 208 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog61 hydrog ? ? C C 6 N3 ? ? ? 1_555 D G 4 N1 ? ? B C 80 F G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C C 6 N4 ? ? ? 1_555 D G 4 O6 ? ? B C 80 F G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C C 6 O2 ? ? ? 1_555 D G 4 N2 ? ? B C 80 F G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C C 7 N3 ? ? ? 1_555 D G 3 N1 ? ? B C 81 F G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C C 7 N4 ? ? ? 1_555 D G 3 O6 ? ? B C 81 F G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C C 7 O2 ? ? ? 1_555 D G 3 N2 ? ? B C 81 F G 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? C A 8 N1 ? ? ? 1_555 D U 2 N3 ? ? B A 82 F U 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C A 8 N6 ? ? ? 1_555 D U 2 O4 ? ? B A 82 F U 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C G 9 N1 ? ? ? 1_555 D C 1 N3 ? ? B G 83 F C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C G 9 N2 ? ? ? 1_555 D C 1 O2 ? ? B G 83 F C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C G 9 O6 ? ? ? 1_555 D C 1 N4 ? ? B G 83 F C 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O6 B G 79 ? ? H3 F U 208 ? ? 1.39 2 1 H42 B C 80 ? ? O6 F G 207 ? ? 1.49 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HN1 B NH4 101 ? ? 1_555 HN4 B NH4 101 ? ? 3_565 0.33 2 1 N B NH4 101 ? ? 1_555 HN4 B NH4 101 ? ? 2_665 0.40 3 1 N B NH4 101 ? ? 1_555 HN1 B NH4 101 ? ? 3_565 0.54 4 1 HN1 B NH4 101 ? ? 1_555 HN2 B NH4 101 ? ? 2_665 0.62 5 1 N B NH4 101 ? ? 1_555 N B NH4 101 ? ? 2_665 0.65 6 1 HN2 B NH4 101 ? ? 1_555 HN4 B NH4 101 ? ? 2_665 0.83 7 1 HN3 B NH4 101 ? ? 1_555 HN4 B NH4 101 ? ? 2_665 0.89 8 1 HN1 B NH4 101 ? ? 1_555 HN3 B NH4 101 ? ? 2_665 1.12 9 1 H61 B A 84 ? ? 1_555 H61 B A 84 ? ? 6_555 1.32 10 1 N B NH4 101 ? ? 1_555 HN3 B NH4 101 ? ? 3_565 1.41 11 1 N B NH4 101 ? ? 1_555 HN2 B NH4 101 ? ? 2_665 1.45 12 1 "O3'" B A 84 ? ? 1_555 P F C 204 ? ? 6_555 1.92 13 1 N1 B A 84 ? ? 1_555 N1 B A 84 ? ? 6_555 2.02 14 1 "O3'" B A 84 ? ? 1_555 OP1 F C 204 ? ? 6_555 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N7 A G 79 ? ? C8 A G 79 ? ? 1.346 1.305 0.041 0.006 N 2 1 C2 B G 79 ? ? N3 B G 79 ? ? 1.415 1.323 0.092 0.008 N 3 1 N3 B G 79 ? ? C4 B G 79 ? ? 1.289 1.350 -0.061 0.007 N 4 1 C5 B G 79 ? ? C6 B G 79 ? ? 1.495 1.419 0.076 0.010 N 5 1 C5 B G 79 ? ? N7 B G 79 ? ? 1.441 1.388 0.053 0.006 N 6 1 N7 B G 79 ? ? C8 B G 79 ? ? 1.365 1.305 0.060 0.006 N 7 1 N9 B G 79 ? ? C4 B G 79 ? ? 1.453 1.375 0.078 0.008 N 8 1 N1 B C 80 ? ? C6 B C 80 ? ? 1.319 1.367 -0.048 0.006 N 9 1 C2 B C 80 ? ? N3 B C 80 ? ? 1.292 1.353 -0.061 0.008 N 10 1 N3 B C 81 ? ? C4 B C 81 ? ? 1.273 1.335 -0.062 0.007 N 11 1 N1 B A 82 ? ? C2 B A 82 ? ? 1.410 1.339 0.071 0.009 N 12 1 C2 B A 82 ? ? N3 B A 82 ? ? 1.467 1.331 0.136 0.009 N 13 1 C5 B A 82 ? ? N7 B A 82 ? ? 1.444 1.388 0.056 0.006 N 14 1 N7 B A 82 ? ? C8 B A 82 ? ? 1.400 1.311 0.089 0.007 N 15 1 N9 B A 82 ? ? C4 B A 82 ? ? 1.471 1.374 0.097 0.006 N 16 1 N1 B G 83 ? ? C2 B G 83 ? ? 1.430 1.373 0.057 0.008 N 17 1 C2 B G 83 ? ? N3 B G 83 ? ? 1.392 1.323 0.069 0.008 N 18 1 C5 B G 83 ? ? N7 B G 83 ? ? 1.451 1.388 0.063 0.006 N 19 1 N7 B G 83 ? ? C8 B G 83 ? ? 1.374 1.305 0.069 0.006 N 20 1 C2 B A 84 ? ? N3 B A 84 ? ? 1.269 1.331 -0.062 0.009 N 21 1 C5 B A 84 ? ? C6 B A 84 ? ? 1.287 1.406 -0.119 0.009 N 22 1 C6 B A 84 ? ? N1 B A 84 ? ? 1.281 1.351 -0.070 0.007 N 23 1 N3 F C 204 ? ? C4 F C 204 ? ? 1.280 1.335 -0.055 0.007 N 24 1 C2 F U 205 ? ? O2 F U 205 ? ? 1.276 1.219 0.057 0.009 N 25 1 C4 F U 205 ? ? O4 F U 205 ? ? 1.316 1.232 0.084 0.008 N 26 1 C2 F U 205 ? ? N3 F U 205 ? ? 1.425 1.373 0.052 0.007 N 27 1 C2 F G 206 ? ? N3 F G 206 ? ? 1.441 1.323 0.118 0.008 N 28 1 C5 F G 206 ? ? C6 F G 206 ? ? 1.357 1.419 -0.062 0.010 N 29 1 C6 F G 206 ? ? N1 F G 206 ? ? 1.473 1.391 0.082 0.007 N 30 1 N7 F G 206 ? ? C8 F G 206 ? ? 1.369 1.305 0.064 0.006 N 31 1 N1 F G 207 ? ? C2 F G 207 ? ? 1.427 1.373 0.054 0.008 N 32 1 C2 F G 207 ? ? N3 F G 207 ? ? 1.422 1.323 0.099 0.008 N 33 1 C5 F G 207 ? ? C6 F G 207 ? ? 1.495 1.419 0.076 0.010 N 34 1 C6 F G 207 ? ? N1 F G 207 ? ? 1.440 1.391 0.049 0.007 N 35 1 N7 F G 207 ? ? C8 F G 207 ? ? 1.446 1.305 0.141 0.006 N 36 1 N9 F G 207 ? ? C4 F G 207 ? ? 1.424 1.375 0.049 0.008 N 37 1 C2 F G 207 ? ? N2 F G 207 ? ? 1.411 1.341 0.070 0.010 N 38 1 C4 F U 208 ? ? O4 F U 208 ? ? 1.296 1.232 0.064 0.008 N 39 1 N3 F A 209 ? ? C4 F A 209 ? ? 1.306 1.344 -0.038 0.006 N 40 1 C5 F A 209 ? ? C6 F A 209 ? ? 1.319 1.406 -0.087 0.009 N 41 1 C6 F A 209 ? ? N1 F A 209 ? ? 1.398 1.351 0.047 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C8 A G 79 ? ? N9 A G 79 ? ? C4 A G 79 ? ? 103.46 106.40 -2.94 0.40 N 2 1 N9 A G 79 ? ? C4 A G 79 ? ? C5 A G 79 ? ? 108.68 105.40 3.28 0.40 N 3 1 N1 A G 79 ? ? C6 A G 79 ? ? O6 A G 79 ? ? 114.68 119.90 -5.22 0.60 N 4 1 C5 A G 79 ? ? C6 A G 79 ? ? O6 A G 79 ? ? 133.27 128.60 4.67 0.60 N 5 1 C2 A C 80 ? ? N3 A C 80 ? ? C4 A C 80 ? ? 116.47 119.90 -3.43 0.50 N 6 1 C6 A C 81 ? ? N1 A C 81 ? ? C2 A C 81 ? ? 117.82 120.30 -2.48 0.40 N 7 1 N3 A C 81 ? ? C2 A C 81 ? ? O2 A C 81 ? ? 117.30 121.90 -4.60 0.70 N 8 1 C8 A A 82 ? ? N9 A A 82 ? ? C4 A A 82 ? ? 108.27 105.80 2.47 0.40 N 9 1 C5 A A 82 ? ? C6 A A 82 ? ? N6 A A 82 ? ? 118.75 123.70 -4.95 0.80 N 10 1 C8 A A 85 ? ? N9 A A 85 ? ? C4 A A 85 ? ? 108.31 105.80 2.51 0.40 N 11 1 C5 A A 85 ? ? C6 A A 85 ? ? N6 A A 85 ? ? 117.91 123.70 -5.79 0.80 N 12 1 N9 A G 86 ? ? C4 A G 86 ? ? C5 A G 86 ? ? 107.98 105.40 2.58 0.40 N 13 1 N1 A G 86 ? ? C6 A G 86 ? ? O6 A G 86 ? ? 115.36 119.90 -4.54 0.60 N 14 1 N3 A U 88 ? ? C4 A U 88 ? ? O4 A U 88 ? ? 114.82 119.40 -4.58 0.70 N 15 1 C2 E C 204 ? ? N3 E C 204 ? ? C4 E C 204 ? ? 116.20 119.90 -3.70 0.50 N 16 1 N3 E C 204 ? ? C4 E C 204 ? ? C5 E C 204 ? ? 124.50 121.90 2.60 0.40 N 17 1 C5 E A 209 ? ? C6 E A 209 ? ? N1 E A 209 ? ? 120.75 117.70 3.05 0.50 N 18 1 C5 E A 209 ? ? C6 E A 209 ? ? N6 E A 209 ? ? 117.78 123.70 -5.92 0.80 N 19 1 OP1 E C 210 ? ? P E C 210 ? ? OP2 E C 210 ? ? 128.65 119.60 9.05 1.50 N 20 1 C4 B G 75 ? ? C5 B G 75 ? ? N7 B G 75 ? ? 108.27 110.80 -2.53 0.40 N 21 1 N9 B G 75 ? ? C4 B G 75 ? ? C5 B G 75 ? ? 108.28 105.40 2.88 0.40 N 22 1 "O3'" B G 75 ? ? P B A 76 ? ? OP2 B A 76 ? ? 117.96 110.50 7.46 1.10 Y 23 1 "O5'" B G 77 ? ? P B G 77 ? ? OP2 B G 77 ? ? 95.31 105.70 -10.39 0.90 N 24 1 C4 B G 77 ? ? C5 B G 77 ? ? N7 B G 77 ? ? 106.54 110.80 -4.26 0.40 N 25 1 C5 B G 77 ? ? N7 B G 77 ? ? C8 B G 77 ? ? 108.21 104.30 3.91 0.50 N 26 1 "O4'" B G 79 ? ? "C1'" B G 79 ? ? N9 B G 79 ? ? 113.07 108.50 4.57 0.70 N 27 1 C6 B G 79 ? ? N1 B G 79 ? ? C2 B G 79 ? ? 118.60 125.10 -6.50 0.60 N 28 1 N1 B G 79 ? ? C2 B G 79 ? ? N3 B G 79 ? ? 128.61 123.90 4.71 0.60 N 29 1 C4 B G 79 ? ? C5 B G 79 ? ? N7 B G 79 ? ? 104.59 110.80 -6.21 0.40 N 30 1 C5 B G 79 ? ? N7 B G 79 ? ? C8 B G 79 ? ? 109.12 104.30 4.82 0.50 N 31 1 N9 B G 79 ? ? C4 B G 79 ? ? C5 B G 79 ? ? 110.43 105.40 5.03 0.40 N 32 1 N3 B G 79 ? ? C4 B G 79 ? ? N9 B G 79 ? ? 120.69 126.00 -5.31 0.60 N 33 1 C6 B G 79 ? ? C5 B G 79 ? ? N7 B G 79 ? ? 135.65 130.40 5.25 0.60 N 34 1 N1 B G 79 ? ? C2 B G 79 ? ? N2 B G 79 ? ? 108.34 116.20 -7.86 0.90 N 35 1 N1 B G 79 ? ? C6 B G 79 ? ? O6 B G 79 ? ? 109.60 119.90 -10.30 0.60 N 36 1 C5 B G 79 ? ? C6 B G 79 ? ? O6 B G 79 ? ? 137.16 128.60 8.56 0.60 N 37 1 "O3'" B C 80 ? ? P B C 81 ? ? OP2 B C 81 ? ? 118.30 110.50 7.80 1.10 Y 38 1 "O5'" B C 81 ? ? P B C 81 ? ? OP2 B C 81 ? ? 96.20 105.70 -9.50 0.90 N 39 1 N3 B C 81 ? ? C2 B C 81 ? ? O2 B C 81 ? ? 116.38 121.90 -5.52 0.70 N 40 1 N3 B C 81 ? ? C4 B C 81 ? ? N4 B C 81 ? ? 112.17 118.00 -5.83 0.70 N 41 1 C5 B C 81 ? ? C4 B C 81 ? ? N4 B C 81 ? ? 126.42 120.20 6.22 0.70 N 42 1 "O5'" B A 82 ? ? P B A 82 ? ? OP2 B A 82 ? ? 99.87 105.70 -5.83 0.90 N 43 1 C6 B A 82 ? ? N1 B A 82 ? ? C2 B A 82 ? ? 112.74 118.60 -5.86 0.60 N 44 1 C5 B A 82 ? ? C6 B A 82 ? ? N1 B A 82 ? ? 125.36 117.70 7.66 0.50 N 45 1 C5 B A 82 ? ? C6 B A 82 ? ? N6 B A 82 ? ? 118.00 123.70 -5.70 0.80 N 46 1 C6 B G 83 ? ? N1 B G 83 ? ? C2 B G 83 ? ? 118.77 125.10 -6.33 0.60 N 47 1 N1 B G 83 ? ? C2 B G 83 ? ? N3 B G 83 ? ? 127.55 123.90 3.65 0.60 N 48 1 C2 B G 83 ? ? N3 B G 83 ? ? C4 B G 83 ? ? 107.72 111.90 -4.18 0.50 N 49 1 N1 B G 83 ? ? C6 B G 83 ? ? O6 B G 83 ? ? 124.23 119.90 4.33 0.60 N 50 1 C5 B G 83 ? ? C6 B G 83 ? ? O6 B G 83 ? ? 121.76 128.60 -6.84 0.60 N 51 1 C6 B A 84 ? ? N1 B A 84 ? ? C2 B A 84 ? ? 127.99 118.60 9.39 0.60 N 52 1 C2 B A 84 ? ? N3 B A 84 ? ? C4 B A 84 ? ? 99.08 110.60 -11.52 0.50 N 53 1 N3 B A 84 ? ? C4 B A 84 ? ? C5 B A 84 ? ? 135.19 126.80 8.39 0.70 N 54 1 C4 B A 84 ? ? C5 B A 84 ? ? C6 B A 84 ? ? 120.19 117.00 3.19 0.50 N 55 1 C5 B A 84 ? ? C6 B A 84 ? ? N1 B A 84 ? ? 107.93 117.70 -9.77 0.50 N 56 1 C4 B A 84 ? ? C5 B A 84 ? ? N7 B A 84 ? ? 116.66 110.70 5.96 0.50 N 57 1 C5 B A 84 ? ? N7 B A 84 ? ? C8 B A 84 ? ? 98.51 103.90 -5.39 0.50 N 58 1 N9 B A 84 ? ? C4 B A 84 ? ? C5 B A 84 ? ? 102.45 105.80 -3.35 0.40 N 59 1 N3 B A 84 ? ? C4 B A 84 ? ? N9 B A 84 ? ? 122.36 127.40 -5.04 0.80 N 60 1 C6 B A 84 ? ? C5 B A 84 ? ? N7 B A 84 ? ? 123.10 132.30 -9.20 0.70 N 61 1 N1 B A 84 ? ? C6 B A 84 ? ? N6 B A 84 ? ? 132.26 118.60 13.66 0.60 N 62 1 OP1 F C 204 ? ? P F C 204 ? ? OP2 F C 204 ? ? 130.54 119.60 10.94 1.50 N 63 1 C6 F C 204 ? ? N1 F C 204 ? ? C2 F C 204 ? ? 116.01 120.30 -4.29 0.40 N 64 1 N1 F C 204 ? ? C2 F C 204 ? ? N3 F C 204 ? ? 124.46 119.20 5.26 0.70 N 65 1 N1 F C 204 ? ? C2 F C 204 ? ? O2 F C 204 ? ? 124.82 118.90 5.92 0.60 N 66 1 N3 F C 204 ? ? C2 F C 204 ? ? O2 F C 204 ? ? 110.70 121.90 -11.20 0.70 N 67 1 N3 F U 205 ? ? C4 F U 205 ? ? O4 F U 205 ? ? 128.64 119.40 9.24 0.70 N 68 1 C5 F U 205 ? ? C4 F U 205 ? ? O4 F U 205 ? ? 119.17 125.90 -6.73 0.60 N 69 1 "O3'" F U 205 ? ? P F G 206 ? ? OP2 F G 206 ? ? 117.65 110.50 7.15 1.10 Y 70 1 C6 F G 206 ? ? N1 F G 206 ? ? C2 F G 206 ? ? 117.09 125.10 -8.01 0.60 N 71 1 C4 F G 206 ? ? C5 F G 206 ? ? C6 F G 206 ? ? 123.58 118.80 4.78 0.60 N 72 1 C5 F G 206 ? ? C6 F G 206 ? ? N1 F G 206 ? ? 115.44 111.50 3.94 0.50 N 73 1 C6 F G 206 ? ? C5 F G 206 ? ? N7 F G 206 ? ? 124.62 130.40 -5.78 0.60 N 74 1 N1 F G 206 ? ? C2 F G 206 ? ? N2 F G 206 ? ? 106.76 116.20 -9.44 0.90 N 75 1 N3 F G 206 ? ? C2 F G 206 ? ? N2 F G 206 ? ? 127.30 119.90 7.40 0.70 N 76 1 N1 F G 206 ? ? C6 F G 206 ? ? O6 F G 206 ? ? 127.41 119.90 7.51 0.60 N 77 1 C5 F G 206 ? ? C6 F G 206 ? ? O6 F G 206 ? ? 117.14 128.60 -11.46 0.60 N 78 1 "O5'" F G 207 ? ? P F G 207 ? ? OP2 F G 207 ? ? 99.72 105.70 -5.98 0.90 N 79 1 C6 F G 207 ? ? N1 F G 207 ? ? C2 F G 207 ? ? 119.11 125.10 -5.99 0.60 N 80 1 C5 F G 207 ? ? C6 F G 207 ? ? N1 F G 207 ? ? 114.78 111.50 3.28 0.50 N 81 1 C4 F G 207 ? ? C5 F G 207 ? ? N7 F G 207 ? ? 106.47 110.80 -4.33 0.40 N 82 1 N7 F G 207 ? ? C8 F G 207 ? ? N9 F G 207 ? ? 109.63 113.10 -3.47 0.50 N 83 1 N9 F G 207 ? ? C4 F G 207 ? ? C5 F G 207 ? ? 110.72 105.40 5.32 0.40 N 84 1 C2 F A 209 ? ? N3 F A 209 ? ? C4 F A 209 ? ? 105.30 110.60 -5.30 0.50 N 85 1 N3 F A 209 ? ? C4 F A 209 ? ? C5 F A 209 ? ? 133.16 126.80 6.36 0.70 N 86 1 C4 F A 209 ? ? C5 F A 209 ? ? N7 F A 209 ? ? 116.56 110.70 5.86 0.50 N 87 1 C5 F A 209 ? ? N7 F A 209 ? ? C8 F A 209 ? ? 98.24 103.90 -5.66 0.50 N 88 1 N9 F A 209 ? ? C4 F A 209 ? ? C5 F A 209 ? ? 103.14 105.80 -2.66 0.40 N 89 1 C6 F A 209 ? ? C5 F A 209 ? ? N7 F A 209 ? ? 126.62 132.30 -5.68 0.70 N 90 1 N1 F A 209 ? ? C6 F A 209 ? ? N6 F A 209 ? ? 130.90 118.60 12.30 0.60 N 91 1 C5 F A 209 ? ? C6 F A 209 ? ? N6 F A 209 ? ? 110.88 123.70 -12.82 0.80 N 92 1 C5 F C 210 ? ? C4 F C 210 ? ? N4 F C 210 ? ? 115.02 120.20 -5.18 0.70 N 93 1 C6 F C 212 ? ? N1 F C 212 ? ? C2 F C 212 ? ? 117.80 120.30 -2.50 0.40 N 94 1 N3 F C 212 ? ? C4 F C 212 ? ? N4 F C 212 ? ? 112.79 118.00 -5.21 0.70 N 95 1 C5 F C 212 ? ? C4 F C 212 ? ? N4 F C 212 ? ? 124.68 120.20 4.48 0.70 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NH4 101 ? E NH4 . 2 1 A NH4 102 ? F NH4 . 3 1 A NH4 102 ? F NH4 . 4 1 A HOH 202 ? H HOH . 5 1 E HOH 301 ? I HOH . 6 1 B HOH 210 ? J HOH . 7 1 B HOH 211 ? J HOH . 8 1 B HOH 216 ? J HOH . 9 1 B HOH 222 ? J HOH . 10 1 F HOH 303 ? K HOH . 11 1 F HOH 304 ? K HOH . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -9.0468 _pdbx_refine_tls.origin_y 12.2677 _pdbx_refine_tls.origin_z -37.7518 _pdbx_refine_tls.T[1][1] 0.3467 _pdbx_refine_tls.T[2][2] 0.4168 _pdbx_refine_tls.T[3][3] 0.3413 _pdbx_refine_tls.T[1][2] 0.0136 _pdbx_refine_tls.T[1][3] -0.0106 _pdbx_refine_tls.T[2][3] -0.0201 _pdbx_refine_tls.L[1][1] -0.3563 _pdbx_refine_tls.L[2][2] 0.0697 _pdbx_refine_tls.L[3][3] -0.0709 _pdbx_refine_tls.L[1][2] -0.1005 _pdbx_refine_tls.L[1][3] 0.0180 _pdbx_refine_tls.L[2][3] 0.0288 _pdbx_refine_tls.S[1][1] 0.1675 _pdbx_refine_tls.S[1][2] 0.0559 _pdbx_refine_tls.S[1][3] 0.1267 _pdbx_refine_tls.S[2][1] -0.0845 _pdbx_refine_tls.S[2][2] 0.1277 _pdbx_refine_tls.S[2][3] -0.0770 _pdbx_refine_tls.S[3][1] 0.0195 _pdbx_refine_tls.S[3][2] 0.0049 _pdbx_refine_tls.S[3][3] 0.0009 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 NH4 N N N N 114 NH4 HN1 H N N 115 NH4 HN2 H N N 116 NH4 HN3 H N N 117 NH4 HN4 H N N 118 U OP3 O N N 119 U P P N N 120 U OP1 O N N 121 U OP2 O N N 122 U "O5'" O N N 123 U "C5'" C N N 124 U "C4'" C N R 125 U "O4'" O N N 126 U "C3'" C N S 127 U "O3'" O N N 128 U "C2'" C N R 129 U "O2'" O N N 130 U "C1'" C N R 131 U N1 N N N 132 U C2 C N N 133 U O2 O N N 134 U N3 N N N 135 U C4 C N N 136 U O4 O N N 137 U C5 C N N 138 U C6 C N N 139 U HOP3 H N N 140 U HOP2 H N N 141 U "H5'" H N N 142 U "H5''" H N N 143 U "H4'" H N N 144 U "H3'" H N N 145 U "HO3'" H N N 146 U "H2'" H N N 147 U "HO2'" H N N 148 U "H1'" H N N 149 U H3 H N N 150 U H5 H N N 151 U H6 H N N 152 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 NH4 N HN1 sing N N 118 NH4 N HN2 sing N N 119 NH4 N HN3 sing N N 120 NH4 N HN4 sing N N 121 U OP3 P sing N N 122 U OP3 HOP3 sing N N 123 U P OP1 doub N N 124 U P OP2 sing N N 125 U P "O5'" sing N N 126 U OP2 HOP2 sing N N 127 U "O5'" "C5'" sing N N 128 U "C5'" "C4'" sing N N 129 U "C5'" "H5'" sing N N 130 U "C5'" "H5''" sing N N 131 U "C4'" "O4'" sing N N 132 U "C4'" "C3'" sing N N 133 U "C4'" "H4'" sing N N 134 U "O4'" "C1'" sing N N 135 U "C3'" "O3'" sing N N 136 U "C3'" "C2'" sing N N 137 U "C3'" "H3'" sing N N 138 U "O3'" "HO3'" sing N N 139 U "C2'" "O2'" sing N N 140 U "C2'" "C1'" sing N N 141 U "C2'" "H2'" sing N N 142 U "O2'" "HO2'" sing N N 143 U "C1'" N1 sing N N 144 U "C1'" "H1'" sing N N 145 U N1 C2 sing N N 146 U N1 C6 sing N N 147 U C2 O2 doub N N 148 U C2 N3 sing N N 149 U N3 C4 sing N N 150 U N3 H3 sing N N 151 U C4 O4 doub N N 152 U C4 C5 sing N N 153 U C5 C6 doub N N 154 U C5 H5 sing N N 155 U C6 H6 sing N N 156 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6HU6 'double helix' 6HU6 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 19 1_555 -0.176 -0.312 -0.104 -2.996 -12.209 -3.506 1 A_G75:C212_E A 75 ? E 212 ? 19 1 1 A A 2 1_555 B U 18 1_555 0.331 -0.126 -0.077 -2.853 -15.391 -3.149 2 A_A76:U211_E A 76 ? E 211 ? 20 1 1 A G 3 1_555 B C 17 1_555 -0.201 -0.014 0.219 -2.055 -15.485 0.254 3 A_G77:C210_E A 77 ? E 210 ? 19 1 1 A U 4 1_555 B A 16 1_555 -0.092 -0.118 0.286 0.770 -10.687 7.565 4 A_U78:A209_E A 78 ? E 209 ? 20 1 1 A G 5 1_555 B U 15 1_555 -1.603 -0.556 -0.070 -1.713 -12.707 2.577 5 A_G79:U208_E A 79 ? E 208 ? 28 1 1 A C 6 1_555 B G 14 1_555 -0.018 -0.261 -0.014 2.976 -13.559 -3.798 6 A_C80:G207_E A 80 ? E 207 ? 19 1 1 A C 7 1_555 B G 13 1_555 0.045 -0.303 0.191 0.843 -14.714 0.387 7 A_C81:G206_E A 81 ? E 206 ? 19 1 1 A A 8 1_555 B U 12 1_555 0.172 -0.280 0.252 -3.321 -13.824 -6.548 8 A_A82:U205_E A 82 ? E 205 ? 20 1 1 A G 9 1_555 B C 11 1_555 0.107 -0.289 -0.075 1.457 -11.377 -2.420 9 A_G83:C204_E A 83 ? E 204 ? 19 1 1 A A 10 1_555 B U 10 1_555 0.169 -0.261 0.002 1.151 -6.524 -3.469 10 A_A84:U203_E A 84 ? E 203 ? 20 1 1 A A 11 1_555 B U 9 1_555 -0.237 -0.352 0.042 -1.041 -14.325 1.422 11 A_A85:U202_E A 85 ? E 202 ? 20 1 1 A G 12 1_555 B U 8 1_555 -1.586 -0.421 0.074 0.118 -11.215 5.311 12 A_G86:U201_E A 86 ? E 201 ? 28 1 1 A C 13 1_555 B G 7 1_555 0.121 -0.304 -0.090 0.872 -11.815 0.012 13 A_C87:G200_E A 87 ? E 200 ? 19 1 1 A U 14 1_555 B A 6 1_555 -0.233 -0.227 0.211 -2.615 -9.043 -0.152 14 A_U88:A199_E A 88 ? E 199 ? 20 1 1 A G 15 1_555 B C 5 1_555 0.370 -0.310 0.076 -6.310 -11.473 -2.776 15 A_G89:C198_E A 89 ? E 198 ? 19 1 1 A C 16 1_555 B G 4 1_555 -0.317 -0.062 0.221 2.945 -7.959 3.193 16 A_C90:G197_E A 90 ? E 197 ? 19 1 1 A C 17 1_555 B G 3 1_555 0.444 -0.102 -0.090 10.769 -13.877 3.495 17 A_C91:G196_E A 91 ? E 196 ? 19 1 1 A U 18 1_555 B A 2 1_555 0.533 -0.239 -0.352 7.368 -14.682 5.524 18 A_U92:A195_E A 92 ? E 195 ? 20 1 1 A C 19 1_555 B G 1 1_555 0.251 0.005 0.047 9.227 -5.326 3.813 19 A_C93:G194_E A 93 ? E 194 ? 19 1 1 C G 1 1_555 D C 9 1_555 -0.723 -0.178 -0.236 -10.944 -7.426 1.233 20 B_G75:C212_F B 75 ? F 212 ? 19 1 1 C A 2 1_555 D U 8 1_555 0.088 -0.196 0.078 -8.549 -6.509 1.110 21 B_A76:U211_F B 76 ? F 211 ? 20 1 1 C G 3 1_555 D C 7 1_555 -0.209 -0.226 -0.017 -9.012 -14.910 -2.860 22 B_G77:C210_F B 77 ? F 210 ? 19 1 1 C U 4 1_555 D A 6 1_555 -0.017 -0.108 -0.010 -4.455 -8.224 0.105 23 B_U78:A209_F B 78 ? F 209 ? 20 1 1 C G 5 1_555 D U 5 1_555 -1.762 -0.721 0.094 -0.885 -11.369 -9.061 24 B_G79:U208_F B 79 ? F 208 ? 28 1 1 C C 6 1_555 D G 4 1_555 0.221 -0.395 0.034 4.087 -16.356 -7.358 25 B_C80:G207_F B 80 ? F 207 ? 19 1 1 C C 7 1_555 D G 3 1_555 0.171 -0.264 0.014 3.441 -10.851 -2.729 26 B_C81:G206_F B 81 ? F 206 ? 19 1 1 C A 8 1_555 D U 2 1_555 0.553 -0.196 0.271 1.708 -15.390 3.982 27 B_A82:U205_F B 82 ? F 205 ? 20 1 1 C G 9 1_555 D C 1 1_555 -0.029 -0.358 0.056 -4.181 -14.276 -5.699 28 B_G83:C204_F B 83 ? F 204 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 19 1_555 A A 2 1_555 B U 18 1_555 -0.332 -1.298 3.323 0.434 4.080 36.095 -2.649 0.593 3.158 6.559 -0.697 36.320 1 AA_G75A76:U211C212_EE A 75 ? E 212 ? A 76 ? E 211 ? 1 A A 2 1_555 B U 18 1_555 A G 3 1_555 B C 17 1_555 0.271 -1.759 3.127 -1.381 6.843 30.030 -4.506 -0.752 2.656 12.987 2.622 30.812 2 AA_A76G77:C210U211_EE A 76 ? E 211 ? A 77 ? E 210 ? 1 A G 3 1_555 B C 17 1_555 A U 4 1_555 B A 16 1_555 0.572 -1.592 3.118 -0.127 5.977 32.394 -3.736 -1.029 2.785 10.601 0.225 32.927 3 AA_G77U78:A209C210_EE A 77 ? E 210 ? A 78 ? E 209 ? 1 A U 4 1_555 B A 16 1_555 A G 5 1_555 B U 15 1_555 -0.374 -1.833 3.080 0.136 15.338 23.762 -6.556 0.791 1.618 33.186 -0.295 28.223 4 AA_U78G79:U208A209_EE A 78 ? E 209 ? A 79 ? E 208 ? 1 A G 5 1_555 B U 15 1_555 A C 6 1_555 B G 14 1_555 0.088 -1.382 3.082 -2.017 8.410 37.944 -2.995 -0.353 2.718 12.732 3.054 38.882 5 AA_G79C80:G207U208_EE A 79 ? E 208 ? A 80 ? E 207 ? 1 A C 6 1_555 B G 14 1_555 A C 7 1_555 B G 13 1_555 0.568 -1.774 3.239 1.187 8.688 32.614 -4.361 -0.801 2.708 15.133 -2.067 33.741 6 AA_C80C81:G206G207_EE A 80 ? E 207 ? A 81 ? E 206 ? 1 A C 7 1_555 B G 13 1_555 A A 8 1_555 B U 12 1_555 -0.139 -1.788 3.304 -0.675 7.180 29.590 -4.766 0.136 2.805 13.802 1.298 30.437 7 AA_C81A82:U205G206_EE A 81 ? E 206 ? A 82 ? E 205 ? 1 A A 8 1_555 B U 12 1_555 A G 9 1_555 B C 11 1_555 -0.192 -1.819 3.120 1.349 4.060 32.161 -3.911 0.562 2.865 7.288 -2.422 32.437 8 AA_A82G83:C204U205_EE A 82 ? E 205 ? A 83 ? E 204 ? 1 A G 9 1_555 B C 11 1_555 A A 10 1_555 B U 10 1_555 -0.127 -1.856 3.276 -0.562 3.091 31.610 -3.943 0.132 3.087 5.657 1.029 31.762 9 AA_G83A84:U203C204_EE A 83 ? E 204 ? A 84 ? E 203 ? 1 A A 10 1_555 B U 10 1_555 A A 11 1_555 B U 9 1_555 0.773 -1.994 3.285 2.200 8.884 27.405 -5.820 -1.099 2.578 18.122 -4.489 28.865 10 AA_A84A85:U202U203_EE A 84 ? E 203 ? A 85 ? E 202 ? 1 A A 11 1_555 B U 9 1_555 A G 12 1_555 B U 8 1_555 -0.052 -2.060 2.962 -2.574 13.153 24.488 -6.647 -0.355 1.656 28.448 5.568 27.867 11 AA_A85G86:U201U202_EE A 85 ? E 202 ? A 86 ? E 201 ? 1 A G 12 1_555 B U 8 1_555 A C 13 1_555 B G 7 1_555 -0.040 -1.607 3.174 0.352 8.980 37.795 -3.422 0.099 2.736 13.628 -0.535 38.811 12 AA_G86C87:G200U201_EE A 86 ? E 201 ? A 87 ? E 200 ? 1 A C 13 1_555 B G 7 1_555 A U 14 1_555 B A 6 1_555 0.312 -2.038 3.238 -0.816 12.456 29.932 -5.567 -0.685 2.226 22.903 1.500 32.376 13 AA_C87U88:A199G200_EE A 87 ? E 200 ? A 88 ? E 199 ? 1 A U 14 1_555 B A 6 1_555 A G 15 1_555 B C 5 1_555 -0.205 -1.662 3.201 1.390 8.664 33.802 -3.976 0.535 2.695 14.597 -2.342 34.890 14 AA_U88G89:C198A199_EE A 88 ? E 199 ? A 89 ? E 198 ? 1 A G 15 1_555 B C 5 1_555 A C 16 1_555 B G 4 1_555 0.101 -1.766 3.000 -3.365 6.148 26.677 -4.992 -0.917 2.506 13.041 7.138 27.566 15 AA_G89C90:G197C198_EE A 89 ? E 198 ? A 90 ? E 197 ? 1 A C 16 1_555 B G 4 1_555 A C 17 1_555 B G 3 1_555 0.047 -1.318 3.039 1.647 2.305 34.829 -2.514 0.150 2.948 3.843 -2.746 34.940 16 AA_C90C91:G196G197_EE A 90 ? E 197 ? A 91 ? E 196 ? 1 A C 17 1_555 B G 3 1_555 A U 18 1_555 B A 2 1_555 -0.246 -1.664 3.284 1.185 7.994 30.077 -4.537 0.671 2.750 15.065 -2.232 31.119 17 AA_C91U92:A195G196_EE A 91 ? E 196 ? A 92 ? E 195 ? 1 A U 18 1_555 B A 2 1_555 A C 19 1_555 B G 1 1_555 0.221 -1.845 3.324 -6.500 4.371 27.917 -4.622 -1.831 2.883 8.842 13.148 28.974 18 AA_U92C93:G194A195_EE A 92 ? E 195 ? A 93 ? E 194 ? 1 A C 19 1_555 B G 1 1_555 C G 1 1_555 D C 9 1_555 0.196 -3.759 3.883 2.576 4.598 -23.199 7.163 1.572 4.485 -11.248 6.301 -23.782 19 AB_C93G75:C212G194_FE A 93 ? E 194 ? B 75 ? F 212 ? 1 C G 1 1_555 D C 9 1_555 C A 2 1_555 D U 8 1_555 -0.144 -1.688 3.249 -0.833 6.538 36.323 -3.508 0.121 2.915 10.383 1.323 36.896 20 BB_G75A76:U211C212_FF B 75 ? F 212 ? B 76 ? F 211 ? 1 C A 2 1_555 D U 8 1_555 C G 3 1_555 D C 7 1_555 0.316 -1.925 3.255 4.163 9.893 27.127 -5.778 0.192 2.438 20.120 -8.468 29.136 21 BB_A76G77:C210U211_FF B 76 ? F 211 ? B 77 ? F 210 ? 1 C G 3 1_555 D C 7 1_555 C U 4 1_555 D A 6 1_555 0.621 -1.745 3.111 2.245 8.228 31.597 -4.369 -0.756 2.623 14.777 -4.032 32.699 22 BB_G77U78:A209C210_FF B 77 ? F 210 ? B 78 ? F 209 ? 1 C U 4 1_555 D A 6 1_555 C G 5 1_555 D U 5 1_555 -0.166 -2.159 3.139 -1.141 4.290 20.489 -7.561 0.024 2.641 11.881 3.159 20.959 23 BB_U78G79:U208A209_FF B 78 ? F 209 ? B 79 ? F 208 ? 1 C G 5 1_555 D U 5 1_555 C C 6 1_555 D G 4 1_555 0.039 -1.509 3.119 -1.448 6.685 43.024 -2.628 -0.182 2.862 9.046 1.959 43.539 24 BB_G79C80:G207U208_FF B 79 ? F 208 ? B 80 ? F 207 ? 1 C C 6 1_555 D G 4 1_555 C C 7 1_555 D G 3 1_555 -0.412 -1.824 3.214 -0.780 10.814 30.384 -5.007 0.618 2.447 19.856 1.431 32.218 25 BB_C80C81:G206G207_FF B 80 ? F 207 ? B 81 ? F 206 ? 1 C C 7 1_555 D G 3 1_555 C A 8 1_555 D U 2 1_555 0.612 -1.498 3.194 0.753 11.625 30.864 -4.424 -0.965 2.496 20.930 -1.355 32.939 26 BB_C81A82:U205G206_FF B 81 ? F 206 ? B 82 ? F 205 ? 1 C A 8 1_555 D U 2 1_555 C G 9 1_555 D C 1 1_555 -0.259 -1.495 3.254 2.314 9.842 33.805 -3.830 0.747 2.703 16.474 -3.873 35.242 27 BB_A82G83:C204U205_FF B 82 ? F 205 ? B 83 ? F 204 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'European Research Council' Germany 310957 1 'German Research Foundation' Germany BO3588/2-1 2 # _atom_sites.entry_id 6HU6 _atom_sites.fract_transf_matrix[1][1] 0.022829 _atom_sites.fract_transf_matrix[1][2] 0.013181 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026361 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002212 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_