HEADER PHOTOSYNTHESIS 09-OCT-18 6HUN TITLE DIMERIC ARCHEAL RUBISCO FROM HYPERTHERMUS BUTYLICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RUBISCO; COMPND 5 EC: 4.1.1.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPERTHERMUS BUTYLICUS DSM 5456; SOURCE 3 ORGANISM_TAXID: 415426; SOURCE 4 GENE: RBCL, HBUT_0503; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RIBULOSE-1, 5-BISPHOSPHATE CARBOXYLASE OXYGENASE; RUBISCO; THERMAL KEYWDS 2 STABILITY; HYPERTHERMUS BUTYLICUS, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KEOWN,R.BUNDELA,F.G.PEARCE REVDAT 3 24-JAN-24 6HUN 1 REMARK REVDAT 2 26-JUN-19 6HUN 1 JRNL REVDAT 1 12-JUN-19 6HUN 0 JRNL AUTH R.BUNDELA,J.KEOWN,S.WATKIN,F.G.PEARCE JRNL TITL STRUCTURE OF A HYPERTHERMOSTABLE DIMERIC ARCHAEAL RUBISCO JRNL TITL 2 FROM HYPERTHERMUS BUTYLICUS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 75 536 2019 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 31205016 JRNL DOI 10.1107/S2059798319006466 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 41684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6253 - 4.4421 0.99 2718 136 0.1480 0.1798 REMARK 3 2 4.4421 - 3.5263 0.99 2668 137 0.1506 0.1777 REMARK 3 3 3.5263 - 3.0807 0.99 2640 143 0.1775 0.2326 REMARK 3 4 3.0807 - 2.7991 1.00 2641 132 0.1927 0.2257 REMARK 3 5 2.7991 - 2.5985 1.00 2688 129 0.1887 0.2143 REMARK 3 6 2.5985 - 2.4453 1.00 2639 122 0.1860 0.2227 REMARK 3 7 2.4453 - 2.3229 1.00 2663 144 0.1917 0.2510 REMARK 3 8 2.3229 - 2.2217 1.00 2657 136 0.1982 0.2397 REMARK 3 9 2.2217 - 2.1362 1.00 2629 133 0.2091 0.2476 REMARK 3 10 2.1362 - 2.0625 1.00 2652 144 0.2148 0.2578 REMARK 3 11 2.0625 - 1.9980 1.00 2665 124 0.2176 0.2846 REMARK 3 12 1.9980 - 1.9409 1.00 2631 141 0.2257 0.2568 REMARK 3 13 1.9409 - 1.8898 1.00 2634 130 0.2166 0.2516 REMARK 3 14 1.8898 - 1.8437 1.00 2610 151 0.2203 0.2500 REMARK 3 15 1.8437 - 1.8018 0.95 2495 152 0.2389 0.2604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9786 -0.2478 -33.1479 REMARK 3 T TENSOR REMARK 3 T11: 0.1937 T22: 0.6613 REMARK 3 T33: 0.2597 T12: -0.0202 REMARK 3 T13: -0.1697 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.5427 L22: 3.1235 REMARK 3 L33: 2.4988 L12: -0.0104 REMARK 3 L13: -0.6160 L23: -0.0426 REMARK 3 S TENSOR REMARK 3 S11: 0.2293 S12: -0.8181 S13: 0.0616 REMARK 3 S21: 0.1334 S22: 0.0381 S23: -0.7018 REMARK 3 S31: -0.0530 S32: 1.3957 S33: -0.0282 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0711 10.0302 -32.7413 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.1762 REMARK 3 T33: 0.3404 T12: -0.0192 REMARK 3 T13: 0.1049 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.7502 L22: 2.7669 REMARK 3 L33: 3.1767 L12: -0.3957 REMARK 3 L13: -1.5705 L23: 0.0520 REMARK 3 S TENSOR REMARK 3 S11: 0.4607 S12: -0.0164 S13: 0.3593 REMARK 3 S21: 0.4098 S22: -0.1470 S23: 0.5482 REMARK 3 S31: -0.3602 S32: -0.3196 S33: -0.1201 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6053 0.7325 -22.1270 REMARK 3 T TENSOR REMARK 3 T11: 0.5509 T22: 0.5449 REMARK 3 T33: 0.7452 T12: -0.2301 REMARK 3 T13: 0.2727 T23: -0.0703 REMARK 3 L TENSOR REMARK 3 L11: 1.6544 L22: 0.7309 REMARK 3 L33: 2.3836 L12: 0.0148 REMARK 3 L13: -1.0063 L23: -0.9657 REMARK 3 S TENSOR REMARK 3 S11: 0.1614 S12: 0.1114 S13: -0.1449 REMARK 3 S21: 0.5461 S22: 0.0427 S23: 0.8399 REMARK 3 S31: 0.2004 S32: -0.8709 S33: -0.2276 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HUN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1200012337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41694 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.22300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1GEH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CACL2, 20% (W/V) PEG6000, AND REMARK 280 100 MM SODIUM ACETATE/ACETIC ACID, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 19.53397 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.93300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.61257 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 19.53397 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.93300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 43.61257 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 36.34405 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -87.22515 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 610 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 658 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 GLY A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLY A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 MET A 3 REMARK 465 HIS A 4 REMARK 465 GLU A 5 REMARK 465 HIS A 6 REMARK 465 PHE A 7 REMARK 465 ASP A 8 REMARK 465 GLY A 318 REMARK 465 VAL A 319 REMARK 465 GLY A 320 REMARK 465 LYS A 321 REMARK 465 ARG A 441 REMARK 465 PRO A 442 REMARK 465 VAL A 443 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 121 CG ARG A 121 CD -0.177 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 121 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP A 254 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 16 86.98 -167.30 REMARK 500 SER A 52 -103.48 -135.48 REMARK 500 THR A 57 -62.44 -96.04 REMARK 500 SER A 106 -66.64 -94.66 REMARK 500 ASP A 153 -43.11 -134.47 REMARK 500 ALA A 194 -107.23 -140.98 REMARK 500 CYS A 199 76.48 -163.55 REMARK 500 PHE A 283 -16.89 101.81 REMARK 500 ALA A 424 35.03 -77.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 501 DBREF 6HUN A 3 443 UNP A2BK54 A2BK54_HYPBU 1 441 SEQADV 6HUN MET A -14 UNP A2BK54 INITIATING METHIONINE SEQADV 6HUN GLY A -13 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -12 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -11 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -10 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -9 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -8 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN HIS A -7 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN GLY A -6 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN GLU A -5 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN ASN A -4 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN LEU A -3 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN TYR A -2 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN PHE A -1 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN GLN A 0 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN GLY A 1 UNP A2BK54 EXPRESSION TAG SEQADV 6HUN SER A 2 UNP A2BK54 EXPRESSION TAG SEQRES 1 A 458 MET GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR SEQRES 2 A 458 PHE GLN GLY SER MET HIS GLU HIS PHE ASP SER ILE TYR SEQRES 3 A 458 LEU GLU PHE VAL ASP GLU SER TYR LYS PRO GLY LYS ASP SEQRES 4 A 458 GLU VAL ILE ALA VAL PHE ARG VAL THR PRO ALA GLN GLY SEQRES 5 A 458 ILE SER ILE LYS ASP ALA ALA GLY ARG ILE ALA ALA GLU SEQRES 6 A 458 SER SER VAL GLY THR TRP THR THR LEU SER VAL LYS PRO SEQRES 7 A 458 SER TRP PHE GLU LYS LEU LYS ALA LYS ALA TYR ARG PHE SEQRES 8 A 458 HIS ASP LEU GLY ASP GLY SER TRP LEU VAL TRP VAL ALA SEQRES 9 A 458 TYR PRO VAL GLU LEU PHE GLU GLU GLY SER ILE PRO ASN SEQRES 10 A 458 PHE ALA SER SER ILE LEU GLY ASN ILE PHE GLY MET LYS SEQRES 11 A 458 ALA ILE ALA GLY LEU ARG VAL GLU ASP VAL TYR PHE PRO SEQRES 12 A 458 PRO SER TYR LEU GLU THR PHE PRO GLY PRO ASN LYS GLY SEQRES 13 A 458 ILE GLN GLY VAL ARG GLU ILE LEU GLY ILE LYS ASP ARG SEQRES 14 A 458 PRO ILE LEU ALA THR VAL PRO LYS PRO LYS LEU GLY TYR SEQRES 15 A 458 THR PRO GLU GLU TYR GLY ARG VAL ALA TYR GLU ILE LEU SEQRES 16 A 458 ILE GLY GLY ILE ASP LEU VAL LYS ASP ASP GLU ASN PHE SEQRES 17 A 458 ALA SER GLN PRO PHE CYS ARG PHE GLU ALA ARG LEU LYS SEQRES 18 A 458 GLU VAL MET LYS ALA ILE ASP ARG ALA GLU LYS GLU THR SEQRES 19 A 458 GLY GLU ARG LYS GLY TYR LEU ALA ASN VAL THR ALA PRO SEQRES 20 A 458 ILE ARG GLU MET GLU LYS ARG ILE LYS LEU VAL ALA ASP SEQRES 21 A 458 TYR GLY ASN LYS PHE ILE MET ILE ASP PHE LEU THR ALA SEQRES 22 A 458 GLY TRP ALA ALA LEU GLN HIS ALA ARG GLU LEU ALA GLU SEQRES 23 A 458 GLU TYR ASP LEU ALA ILE HIS GLY HIS ARG ALA PHE HIS SEQRES 24 A 458 ALA ALA PHE THR ARG ASN PRO LYS HIS GLY VAL SER MET SEQRES 25 A 458 PHE LEU VAL ALA LYS LEU ALA ARG MET ALA GLY VAL ASP SEQRES 26 A 458 HIS VAL HIS VAL GLY THR PRO GLY VAL GLY LYS MET ASP SEQRES 27 A 458 ALA LYS THR ARG GLU VAL LEU GLU HIS THR ARG ILE VAL SEQRES 28 A 458 ARG GLU GLN TYR TYR ARG PRO LYS GLU GLY ASP LEU PHE SEQRES 29 A 458 HIS LEU GLU GLN PRO TRP SER ASN ILE LYS PRO VAL PHE SEQRES 30 A 458 PRO VAL ALA SER GLY GLY LEU HIS PRO GLY THR LEU PRO SEQRES 31 A 458 GLU VAL ILE ARG VAL MET GLY LYS ASP ILE ILE MET GLN SEQRES 32 A 458 VAL GLY GLY GLY VAL LEU GLY HIS PRO ASP GLY PRO GLU SEQRES 33 A 458 ALA GLY ALA ARG ALA VAL ARG GLN ALA VAL GLU ALA ALA SEQRES 34 A 458 MET LYS GLY ILE SER LEU ASP GLU TYR ALA ARG GLU HIS SEQRES 35 A 458 ARG GLU LEU ALA ARG ALA LEU GLU LYS TRP GLY TYR VAL SEQRES 36 A 458 ARG PRO VAL HET CA A 501 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *127(H2 O) HELIX 1 AA1 SER A 9 VAL A 15 5 7 HELIX 2 AA2 SER A 39 SER A 51 1 13 HELIX 3 AA3 TRP A 65 LYS A 70 1 6 HELIX 4 AA4 PRO A 91 PHE A 95 5 5 HELIX 5 AA5 SER A 99 LEU A 108 1 10 HELIX 6 AA6 GLY A 109 MET A 114 5 6 HELIX 7 AA7 PRO A 128 GLU A 133 1 6 HELIX 8 AA8 LYS A 140 GLY A 150 1 11 HELIX 9 AA9 THR A 168 GLY A 182 1 15 HELIX 10 AB1 GLN A 196 CYS A 199 5 4 HELIX 11 AB2 ARG A 200 GLY A 220 1 21 HELIX 12 AB3 PRO A 232 TYR A 246 1 15 HELIX 13 AB4 GLY A 259 ASP A 274 1 16 HELIX 14 AB5 HIS A 284 ARG A 289 1 6 HELIX 15 AB6 SER A 296 GLY A 308 1 13 HELIX 16 AB7 ASP A 323 GLU A 338 1 16 HELIX 17 AB8 HIS A 370 GLY A 372 5 3 HELIX 18 AB9 THR A 373 GLY A 382 1 10 HELIX 19 AC1 VAL A 389 GLY A 395 1 7 HELIX 20 AC2 GLY A 399 GLY A 417 1 19 HELIX 21 AC3 SER A 419 ALA A 424 1 6 HELIX 22 AC4 HIS A 427 GLY A 438 1 12 SHEET 1 AA1 5 LYS A 72 ASP A 78 0 SHEET 2 AA1 5 TRP A 84 TYR A 90 -1 O LEU A 85 N HIS A 77 SHEET 3 AA1 5 VAL A 26 PRO A 34 -1 N VAL A 26 O TYR A 90 SHEET 4 AA1 5 ILE A 117 TYR A 126 -1 O TYR A 126 N ILE A 27 SHEET 5 AA1 5 GLY A 294 VAL A 295 1 O GLY A 294 N LEU A 120 SHEET 1 AA2 9 ILE A 156 THR A 159 0 SHEET 2 AA2 9 LEU A 186 LYS A 188 1 O LYS A 188 N THR A 159 SHEET 3 AA2 9 GLY A 224 ASN A 228 1 O LEU A 226 N VAL A 187 SHEET 4 AA2 9 PHE A 250 ASP A 254 1 O MET A 252 N ALA A 227 SHEET 5 AA2 9 ALA A 276 HIS A 280 1 O HIS A 280 N ILE A 253 SHEET 6 AA2 9 HIS A 311 HIS A 313 1 O HIS A 311 N GLY A 279 SHEET 7 AA2 9 PHE A 362 ALA A 365 1 O PHE A 362 N VAL A 312 SHEET 8 AA2 9 ILE A 386 GLN A 388 1 O ILE A 386 N ALA A 365 SHEET 9 AA2 9 ILE A 156 THR A 159 1 N ILE A 156 O MET A 387 SHEET 1 AA3 2 TYR A 340 TYR A 341 0 SHEET 2 AA3 2 GLN A 353 PRO A 354 -1 O GLN A 353 N TYR A 341 LINK CA CA A 501 O HOH A 700 1555 1555 2.76 CISPEP 1 LYS A 162 PRO A 163 0 -2.65 SITE 1 AC1 4 LYS A 188 HIS A 278 HIS A 280 HOH A 700 CRYST1 75.412 69.866 94.494 90.00 112.62 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013260 0.000000 0.005525 0.00000 SCALE2 0.000000 0.014313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011465 0.00000