HEADER LYASE 05-NOV-18 6I3E TITLE HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH 4-BUTYLBENZENESULFONAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE II,CARBONIC ANHYDRASE C,CAC,CARBONIC COMPND 5 ANHYDRASE II,CA-II; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE FIRST 5 AMINO ACIDS (GSPEF) ARE REMNANTS OF AN COMPND 9 EXPRESSION TAG. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 KEYWDS LYASE, INHIBITOR, COMPLEX, CO2 CONVERSION EXPDTA X-RAY DIFFRACTION AUTHOR S.GLOECKNER,K.NGO,A.HEINE,G.KLEBE REVDAT 3 24-JAN-24 6I3E 1 LINK REVDAT 2 08-APR-20 6I3E 1 JRNL REVDAT 1 20-NOV-19 6I3E 0 JRNL AUTH S.GLOCKNER,K.NGO,C.P.SAGER,T.HUFNER-WULSDORF,A.HEINE,G.KLEBE JRNL TITL CONFORMATIONAL CHANGES IN ALKYL CHAINS DETERMINE THE JRNL TITL 2 THERMODYNAMIC AND KINETIC BINDING PROFILES OF CARBONIC JRNL TITL 3 ANHYDRASE INHIBITORS. JRNL REF ACS CHEM.BIOL. V. 15 675 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 32027480 JRNL DOI 10.1021/ACSCHEMBIO.9B00895 REMARK 2 REMARK 2 RESOLUTION. 1.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 101316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.129 REMARK 3 FREE R VALUE : 0.147 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2126 - 3.3228 1.00 3522 186 0.1407 0.1452 REMARK 3 2 3.3228 - 2.6375 0.94 3251 171 0.1435 0.1687 REMARK 3 3 2.6375 - 2.3041 0.98 3360 177 0.1365 0.1457 REMARK 3 4 2.3041 - 2.0935 0.98 3367 177 0.1210 0.1133 REMARK 3 5 2.0935 - 1.9434 0.99 3353 177 0.1140 0.1431 REMARK 3 6 1.9434 - 1.8289 0.98 3357 176 0.1170 0.1290 REMARK 3 7 1.8289 - 1.7373 0.98 3343 176 0.1142 0.1322 REMARK 3 8 1.7373 - 1.6616 0.97 3278 173 0.1176 0.1459 REMARK 3 9 1.6616 - 1.5977 0.92 3130 164 0.1099 0.1257 REMARK 3 10 1.5977 - 1.5425 0.97 3288 173 0.1076 0.1397 REMARK 3 11 1.5425 - 1.4943 0.97 3298 174 0.1047 0.1274 REMARK 3 12 1.4943 - 1.4516 0.96 3269 172 0.1067 0.1309 REMARK 3 13 1.4516 - 1.4134 0.96 3231 170 0.1121 0.1327 REMARK 3 14 1.4134 - 1.3789 0.96 3273 172 0.1139 0.1412 REMARK 3 15 1.3789 - 1.3475 0.96 3251 172 0.1120 0.1285 REMARK 3 16 1.3475 - 1.3189 0.96 3252 171 0.1189 0.1546 REMARK 3 17 1.3189 - 1.2925 0.95 3195 168 0.1195 0.1520 REMARK 3 18 1.2925 - 1.2681 0.95 3263 172 0.1346 0.1560 REMARK 3 19 1.2681 - 1.2454 0.94 3163 166 0.1280 0.1590 REMARK 3 20 1.2454 - 1.2243 0.91 3062 161 0.1363 0.1426 REMARK 3 21 1.2243 - 1.2046 0.94 3187 168 0.1298 0.1538 REMARK 3 22 1.2046 - 1.1860 0.94 3158 166 0.1336 0.1689 REMARK 3 23 1.1860 - 1.1686 0.94 3197 168 0.1365 0.1559 REMARK 3 24 1.1686 - 1.1521 0.94 3186 168 0.1412 0.1884 REMARK 3 25 1.1521 - 1.1366 0.93 3166 167 0.1465 0.1797 REMARK 3 26 1.1366 - 1.1218 0.92 3049 160 0.1544 0.1787 REMARK 3 27 1.1218 - 1.1078 0.90 3104 164 0.1669 0.2000 REMARK 3 28 1.1078 - 1.0944 0.89 2991 157 0.1703 0.2071 REMARK 3 29 1.0944 - 1.0817 0.87 2918 154 0.1799 0.1696 REMARK 3 30 1.0817 - 1.0695 0.82 2788 146 0.1859 0.2228 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2609 REMARK 3 ANGLE : 1.014 3582 REMARK 3 CHIRALITY : 0.086 358 REMARK 3 PLANARITY : 0.007 518 REMARK 3 DIHEDRAL : 15.376 987 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I3E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : SAGITALLY BENDED SI(111) CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101318 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.070 REMARK 200 RESOLUTION RANGE LOW (A) : 41.487 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 3.830 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08800 REMARK 200 FOR THE DATA SET : 7.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.46700 REMARK 200 FOR SHELL : 2.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KS3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRISODIUM CITRATE DIHYDRATE 1.40 M, REMARK 280 TRIS 0.1 M, PH = 7.8, SATURATED WITH PARA-CHLOROMERCURIBENZOIC REMARK 280 ACID., PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.74350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 PRO A -2 REMARK 465 GLU A -1 REMARK 465 PHE A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 4 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 45 CE NZ REMARK 470 LYS A 80 CE NZ REMARK 470 LYS A 159 CD CE NZ REMARK 470 LYS A 168 NZ REMARK 470 LYS A 170 NZ REMARK 470 LEU A 224 CD1 CD2 REMARK 470 LYS A 228 CE NZ REMARK 470 LYS A 257 CE NZ REMARK 470 LYS A 261 O CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 76 O HOH A 402 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 17.71 -147.50 REMARK 500 ARG A 27 54.24 -142.04 REMARK 500 LEU A 57 -51.08 -122.48 REMARK 500 ASP A 75 101.03 -59.11 REMARK 500 LYS A 76 -77.90 -118.66 REMARK 500 LYS A 111 -11.22 78.48 REMARK 500 PHE A 176 53.22 -152.13 REMARK 500 PHE A 176 53.22 -141.44 REMARK 500 ASN A 244 50.02 -94.97 REMARK 500 LYS A 252 -141.38 57.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 634 DISTANCE = 6.56 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 H1Z A 310 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 37 O REMARK 620 2 THR A 37 O 13.8 REMARK 620 3 GLN A 255 OE1 165.5 155.9 REMARK 620 4 HOH A 454 O 97.0 96.8 96.0 REMARK 620 5 HOH A 568 O 97.3 83.5 75.8 91.8 REMARK 620 6 HOH A 582 O 90.5 89.7 76.3 172.0 84.3 REMARK 620 7 HOH A 582 O 136.2 138.0 34.1 125.2 93.0 48.3 REMARK 620 8 HOH A 592 O 92.8 106.6 92.7 94.5 167.4 88.0 74.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 73 OG REMARK 620 2 SER A 220 OG 43.3 REMARK 620 3 HOH A 486 O 160.6 125.7 REMARK 620 4 HOH A 505 O 77.9 46.9 84.5 REMARK 620 5 HOH A 547 O 93.0 129.3 86.4 113.1 REMARK 620 6 HOH A 600 O 98.1 67.5 88.1 83.9 161.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 73 OG REMARK 620 2 SER A 220 OG 43.3 REMARK 620 3 HOH A 486 O 46.9 5.2 REMARK 620 4 HOH A 505 O 45.6 5.1 1.5 REMARK 620 5 HOH A 547 O 42.2 4.8 4.8 3.4 REMARK 620 6 HOH A 600 O 46.1 2.9 3.5 4.1 5.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 104.1 REMARK 620 3 HIS A 119 ND1 112.0 98.7 REMARK 620 4 H1Z A 309 N 110.2 113.7 117.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MBO A 307 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 135 O REMARK 620 2 MBO A 307 CE1 95.6 REMARK 620 3 GLN A 137 O 110.9 93.4 REMARK 620 4 CYS A 206 SG 82.5 174.3 92.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 306 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 137 O REMARK 620 2 GLU A 205 O 88.2 REMARK 620 3 CYS A 206 SG 83.1 94.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MBO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H1Z A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H1Z A 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GDC RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6GM9 RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6HQX RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6HR3 RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6HXD RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6I0W RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6I1U RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 6I2F RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. DBREF 6I3E A 1 261 UNP P00918 CAH2_HUMAN 1 260 SEQADV 6I3E GLY A -4 UNP P00918 EXPRESSION TAG SEQADV 6I3E SER A -3 UNP P00918 EXPRESSION TAG SEQADV 6I3E PRO A -2 UNP P00918 EXPRESSION TAG SEQADV 6I3E GLU A -1 UNP P00918 EXPRESSION TAG SEQADV 6I3E PHE A 0 UNP P00918 EXPRESSION TAG SEQRES 1 A 265 GLY SER PRO GLU PHE MET SER HIS HIS TRP GLY TYR GLY SEQRES 2 A 265 LYS HIS ASN GLY PRO GLU HIS TRP HIS LYS ASP PHE PRO SEQRES 3 A 265 ILE ALA LYS GLY GLU ARG GLN SER PRO VAL ASP ILE ASP SEQRES 4 A 265 THR HIS THR ALA LYS TYR ASP PRO SER LEU LYS PRO LEU SEQRES 5 A 265 SER VAL SER TYR ASP GLN ALA THR SER LEU ARG ILE LEU SEQRES 6 A 265 ASN ASN GLY HIS ALA PHE ASN VAL GLU PHE ASP ASP SER SEQRES 7 A 265 GLN ASP LYS ALA VAL LEU LYS GLY GLY PRO LEU ASP GLY SEQRES 8 A 265 THR TYR ARG LEU ILE GLN PHE HIS PHE HIS TRP GLY SER SEQRES 9 A 265 LEU ASP GLY GLN GLY SER GLU HIS THR VAL ASP LYS LYS SEQRES 10 A 265 LYS TYR ALA ALA GLU LEU HIS LEU VAL HIS TRP ASN THR SEQRES 11 A 265 LYS TYR GLY ASP PHE GLY LYS ALA VAL GLN GLN PRO ASP SEQRES 12 A 265 GLY LEU ALA VAL LEU GLY ILE PHE LEU LYS VAL GLY SER SEQRES 13 A 265 ALA LYS PRO GLY LEU GLN LYS VAL VAL ASP VAL LEU ASP SEQRES 14 A 265 SER ILE LYS THR LYS GLY LYS SER ALA ASP PHE THR ASN SEQRES 15 A 265 PHE ASP PRO ARG GLY LEU LEU PRO GLU SER LEU ASP TYR SEQRES 16 A 265 TRP THR TYR PRO GLY SER LEU THR THR PRO PRO LEU LEU SEQRES 17 A 265 GLU CYS VAL THR TRP ILE VAL LEU LYS GLU PRO ILE SER SEQRES 18 A 265 VAL SER SER GLU GLN VAL LEU LYS PHE ARG LYS LEU ASN SEQRES 19 A 265 PHE ASN GLY GLU GLY GLU PRO GLU GLU LEU MET VAL ASP SEQRES 20 A 265 ASN TRP ARG PRO ALA GLN PRO LEU LYS ASN ARG GLN ILE SEQRES 21 A 265 LYS ALA SER PHE LYS HET ZN A 301 1 HET DMS A 302 4 HET DMS A 303 4 HET NA A 304 2 HET NA A 305 1 HET HG A 306 1 HET MBO A 307 10 HET CIT A 308 13 HET H1Z A 309 15 HET H1Z A 310 26 HETNAM ZN ZINC ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM NA SODIUM ION HETNAM HG MERCURY (II) ION HETNAM MBO MERCURIBENZOIC ACID HETNAM CIT CITRIC ACID HETNAM H1Z 4-BUTOXYBENZENESULFONAMIDE FORMUL 2 ZN ZN 2+ FORMUL 3 DMS 2(C2 H6 O S) FORMUL 5 NA 2(NA 1+) FORMUL 7 HG HG 2+ FORMUL 8 MBO C7 H5 HG O2 FORMUL 9 CIT C6 H8 O7 FORMUL 10 H1Z 2(C10 H15 N O3 S) FORMUL 12 HOH *234(H2 O) HELIX 1 AA1 HIS A 15 ASP A 19 5 5 HELIX 2 AA2 PHE A 20 GLY A 25 5 6 HELIX 3 AA3 LYS A 127 GLY A 129 5 3 HELIX 4 AA4 ASP A 130 VAL A 135 1 6 HELIX 5 AA5 LYS A 154 GLY A 156 5 3 HELIX 6 AA6 LEU A 157 LEU A 164 1 8 HELIX 7 AA7 ASP A 165 LYS A 168 5 4 HELIX 8 AA8 ASP A 180 LEU A 185 5 6 HELIX 9 AA9 SER A 219 ARG A 227 1 9 SHEET 1 AA1 2 ASP A 32 ILE A 33 0 SHEET 2 AA1 2 THR A 108 VAL A 109 1 O THR A 108 N ILE A 33 SHEET 1 AA210 LYS A 39 TYR A 40 0 SHEET 2 AA210 LYS A 257 ALA A 258 1 O ALA A 258 N LYS A 39 SHEET 3 AA210 TYR A 191 GLY A 196 -1 N THR A 193 O LYS A 257 SHEET 4 AA210 VAL A 207 LEU A 212 -1 O VAL A 207 N GLY A 196 SHEET 5 AA210 LEU A 141 VAL A 150 1 N GLY A 145 O ILE A 210 SHEET 6 AA210 ALA A 116 ASN A 124 -1 N LEU A 118 O ILE A 146 SHEET 7 AA210 TYR A 88 TRP A 97 -1 N HIS A 94 O HIS A 119 SHEET 8 AA210 PHE A 66 PHE A 70 -1 N VAL A 68 O PHE A 93 SHEET 9 AA210 SER A 56 ASN A 61 -1 N LEU A 57 O GLU A 69 SHEET 10 AA210 SER A 173 ASP A 175 -1 O ALA A 174 N ILE A 59 SHEET 1 AA3 6 LEU A 47 SER A 50 0 SHEET 2 AA3 6 VAL A 78 GLY A 81 -1 O VAL A 78 N SER A 50 SHEET 3 AA3 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 AA3 6 ALA A 116 ASN A 124 -1 O HIS A 119 N HIS A 94 SHEET 5 AA3 6 LEU A 141 VAL A 150 -1 O ILE A 146 N LEU A 118 SHEET 6 AA3 6 ILE A 216 VAL A 218 1 O ILE A 216 N PHE A 147 LINK O ATHR A 37 NA NA A 305 1555 1555 2.39 LINK O BTHR A 37 NA NA A 305 1555 1555 2.28 LINK OG SER A 73 NA A NA A 304 1555 1555 2.30 LINK OG SER A 73 NA B NA A 304 1555 1565 2.30 LINK NE2 HIS A 94 ZN ZN A 301 1555 1555 2.02 LINK NE2 HIS A 96 ZN ZN A 301 1555 1555 2.05 LINK ND1 HIS A 119 ZN ZN A 301 1555 1555 2.04 LINK O VAL A 135 HG AMBO A 307 1555 1555 2.98 LINK O GLN A 137 HG B HG A 306 1555 1555 2.91 LINK O GLN A 137 HG AMBO A 307 1555 1555 3.10 LINK O GLU A 205 HG B HG A 306 1555 1555 3.15 LINK SG BCYS A 206 HG B HG A 306 1555 1555 2.45 LINK SG ACYS A 206 HG AMBO A 307 1555 1555 2.38 LINK OG SER A 220 NA B NA A 304 1555 1555 2.45 LINK OG SER A 220 NA A NA A 304 1555 1545 2.45 LINK OE1AGLN A 255 NA NA A 305 1555 1555 2.42 LINK ZN ZN A 301 N H1Z A 309 1555 1555 1.95 LINK NA B NA A 304 O HOH A 486 1555 1555 2.40 LINK NA A NA A 304 O HOH A 486 1555 1565 2.40 LINK NA A NA A 304 O HOH A 505 1555 1555 2.40 LINK NA B NA A 304 O HOH A 505 1555 1545 2.40 LINK NA B NA A 304 O HOH A 547 1555 1555 2.51 LINK NA A NA A 304 O HOH A 547 1555 1565 2.51 LINK NA A NA A 304 O HOH A 600 1555 1555 2.38 LINK NA B NA A 304 O HOH A 600 1555 1545 2.38 LINK NA NA A 305 O HOH A 454 1555 1555 2.29 LINK NA NA A 305 O HOH A 568 1555 1555 2.59 LINK NA NA A 305 O AHOH A 582 1555 1555 2.53 LINK NA NA A 305 O BHOH A 582 1555 1555 2.55 LINK NA NA A 305 O HOH A 592 1555 1555 2.38 CISPEP 1 SER A 29 PRO A 30 0 -1.77 CISPEP 2 PRO A 201 PRO A 202 0 9.75 SITE 1 AC1 4 HIS A 94 HIS A 96 HIS A 119 H1Z A 309 SITE 1 AC2 2 ASP A 243 TRP A 245 SITE 1 AC3 5 PRO A 83 THR A 208 HOH A 496 HOH A 543 SITE 2 AC3 5 HOH A 566 SITE 1 AC4 6 SER A 73 SER A 220 HOH A 486 HOH A 505 SITE 2 AC4 6 HOH A 547 HOH A 600 SITE 1 AC5 6 THR A 37 GLN A 255 HOH A 454 HOH A 568 SITE 2 AC5 6 HOH A 582 HOH A 592 SITE 1 AC6 4 GLN A 137 GLU A 205 CYS A 206 MBO A 307 SITE 1 AC7 7 VAL A 135 GLN A 136 GLN A 137 PRO A 138 SITE 2 AC7 7 CYS A 206 HG A 306 HOH A 539 SITE 1 AC8 4 LYS A 39 HOH A 427 HOH A 530 HOH A 634 SITE 1 AC9 8 HIS A 94 HIS A 96 HIS A 119 LEU A 198 SITE 2 AC9 8 THR A 199 THR A 200 TRP A 209 ZN A 301 SITE 1 AD1 10 HIS A 4 TRP A 5 HIS A 10 ASN A 11 SITE 2 AD1 10 HIS A 15 TRP A 16 ASP A 19 ASP A 180 SITE 3 AD1 10 ARG A 182 GLY A 183 CRYST1 42.483 41.487 71.915 90.00 104.22 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023539 0.000000 0.005963 0.00000 SCALE2 0.000000 0.024104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014345 0.00000