HEADER CONTRACTILE PROTEIN 09-NOV-18 6I4D TITLE CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM ACTIN I IN THE MG-K-ATP/ADP TITLE 2 STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACTIN I; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GELSOLIN; COMPND 8 CHAIN: G; COMPND 9 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: ISOLATE 3D7; SOURCE 4 ORGANISM_TAXID: 36329; SOURCE 5 GENE: PFL2215W; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: GSN, GSB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, FILAMENTOUS, GLIDEOSOME, CYTOSKELETON, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.-P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA REVDAT 2 24-JAN-24 6I4D 1 LINK REVDAT 1 26-JUN-19 6I4D 0 JRNL AUTH E.P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA JRNL TITL ATOMIC VIEW INTO PLASMODIUM ACTIN POLYMERIZATION, ATP JRNL TITL 2 HYDROLYSIS, AND FRAGMENTATION. JRNL REF PLOS BIOL. V. 17 00315 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 31199804 JRNL DOI 10.1371/JOURNAL.PBIO.3000315 REMARK 2 REMARK 2 RESOLUTION. 1.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 152395 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.131 REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.0000 - 2.9800 1.00 11363 146 0.1398 0.1638 REMARK 3 2 2.9800 - 2.3700 1.00 11029 146 0.1243 0.1387 REMARK 3 3 2.3700 - 2.0700 1.00 10954 145 0.1103 0.1368 REMARK 3 4 2.0700 - 1.8800 1.00 10869 144 0.1070 0.1304 REMARK 3 5 1.8800 - 1.7500 1.00 10855 138 0.1048 0.1333 REMARK 3 6 1.7500 - 1.6400 1.00 10844 142 0.1019 0.1334 REMARK 3 7 1.6400 - 1.5600 1.00 10821 148 0.1105 0.1385 REMARK 3 8 1.5600 - 1.4900 1.00 10804 137 0.1166 0.1596 REMARK 3 9 1.4900 - 1.4300 1.00 10805 149 0.1262 0.1437 REMARK 3 10 1.4300 - 1.3900 1.00 10797 136 0.1424 0.1660 REMARK 3 11 1.3900 - 1.3400 1.00 10768 138 0.1651 0.1763 REMARK 3 12 1.3400 - 1.3000 1.00 10758 151 0.1902 0.2344 REMARK 3 13 1.3000 - 1.2700 0.99 10725 134 0.2287 0.2403 REMARK 3 14 1.2700 - 1.2400 0.84 9028 121 0.3131 0.3758 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.132 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.631 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4991 REMARK 3 ANGLE : 1.206 6869 REMARK 3 CHIRALITY : 0.085 715 REMARK 3 PLANARITY : 0.009 924 REMARK 3 DIHEDRAL : 14.414 1934 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I4D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.031 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 152407 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.240 REMARK 200 RESOLUTION RANGE LOW (A) : 59.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 1.07100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CBU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23%(W/V) PEG3350, 0.1 M BIS-TRIS PH REMARK 280 6.0, 0.2M K-SCN; 20% PEG400 USED FOR CRYOPROTECTION, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.38000 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.02000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.38000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.02000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 827 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 946 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1003 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 ASN A 41 REMARK 465 PRO A 42 REMARK 465 GLY A 43 REMARK 465 ILE A 44 REMARK 465 MET A 45 REMARK 465 VAL A 46 REMARK 465 GLY A 47 REMARK 465 MET A 48 REMARK 465 GLU A 49 REMARK 465 GLU A 50 REMARK 465 LYS A 51 REMARK 465 GLY A 367 REMARK 465 PRO A 368 REMARK 465 SER A 369 REMARK 465 ILE A 370 REMARK 465 VAL A 371 REMARK 465 HIS A 372 REMARK 465 ARG A 373 REMARK 465 LYS A 374 REMARK 465 CYS A 375 REMARK 465 PHE A 376 REMARK 465 GLY G -1 REMARK 465 PRO G 0 REMARK 465 MET G 1 REMARK 465 VAL G 2 REMARK 465 VAL G 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN G 33 O HOH G 303 1.38 REMARK 500 HH TYR A 199 O HOH A 501 1.48 REMARK 500 HD1 HIS A 88 O HOH A 511 1.52 REMARK 500 HD21 ASN G 33 O HOH G 305 1.54 REMARK 500 HE22 GLN A 355 O HOH A 510 1.55 REMARK 500 HH TYR A 92 O HOH A 505 1.56 REMARK 500 HD21 ASN G 89 O HOH G 306 1.58 REMARK 500 O HOH A 963 O HOH A 977 1.74 REMARK 500 OH TYR A 199 O HOH A 501 1.79 REMARK 500 O HOH A 921 O HOH A 963 1.84 REMARK 500 O HOH G 333 O HOH G 352 1.92 REMARK 500 O HOH A 594 O HOH A 883 1.94 REMARK 500 O HOH G 317 O HOH G 464 1.96 REMARK 500 O HOH A 912 O HOH A 981 1.98 REMARK 500 O HOH A 525 O HOH G 310 1.99 REMARK 500 O HOH A 732 O HOH A 933 2.00 REMARK 500 O HOH G 436 O HOH G 465 2.02 REMARK 500 O HOH G 379 O HOH G 461 2.05 REMARK 500 O HOH G 431 O HOH G 443 2.06 REMARK 500 O HOH A 751 O HOH A 835 2.07 REMARK 500 OE2 GLU A 101 O HOH A 502 2.13 REMARK 500 OD1 ASN G 33 O HOH G 301 2.15 REMARK 500 O HOH A 930 O HOH A 955 2.16 REMARK 500 OE2 GLU G 68 O HOH G 302 2.17 REMARK 500 O HOH G 390 O HOH G 464 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 503 O HOH A 766 3567 1.64 REMARK 500 O HOH A 895 O HOH G 461 1545 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 180 37.73 -76.53 REMARK 500 LEU A 181 95.82 -168.96 REMARK 500 ALA A 182 -146.57 -146.41 REMARK 500 SER A 202 -28.26 -141.51 REMARK 500 SER A 202 -28.91 -153.75 REMARK 500 ASN A 297 58.37 -147.59 REMARK 500 GLU A 335 31.64 -97.52 REMARK 500 GLN G 54 -8.75 -53.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1004 DISTANCE = 5.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 404 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 O REMARK 620 2 ASP A 155 OD1 61.0 REMARK 620 3 VAL A 160 O 74.1 123.7 REMARK 620 4 ATP A 401 O1G 134.0 131.8 63.6 REMARK 620 5 ATP A 401 O2G 161.4 103.1 112.0 48.4 REMARK 620 6 HOH A 562 O 117.7 64.3 167.8 104.3 55.9 REMARK 620 7 HOH A 605 O 108.0 51.2 126.6 84.9 53.9 49.0 REMARK 620 8 HOH A 680 O 83.0 98.6 108.1 125.8 110.3 77.8 125.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 168 OE1 REMARK 620 2 ASP G 85 OD1 137.0 REMARK 620 3 ASP G 85 OD2 91.4 46.4 REMARK 620 4 GLY G 90 O 146.1 74.2 114.9 REMARK 620 5 ALA G 92 O 99.7 72.2 83.6 104.1 REMARK 620 6 HOH G 412 O 74.8 148.1 163.7 75.3 106.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 401 O2G REMARK 620 2 ATP A 401 O1B 84.1 REMARK 620 3 ADP A 402 O1B 91.2 8.6 REMARK 620 4 HOH A 562 O 89.8 173.8 176.2 REMARK 620 5 HOH A 604 O 174.7 91.7 84.4 94.4 REMARK 620 6 HOH A 605 O 89.0 94.6 90.0 86.4 88.2 REMARK 620 7 HOH A 794 O 97.3 92.7 96.5 86.9 86.0 170.8 REMARK 620 8 HOH A 843 O 15.7 98.6 106.1 75.2 169.3 93.7 90.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 41 O REMARK 620 2 ASP G 42 OD1 76.8 REMARK 620 3 GLU G 73 OE1 75.4 100.3 REMARK 620 4 GLU G 73 OE2 122.9 90.1 52.4 REMARK 620 5 VAL G 121 O 149.4 90.9 134.9 84.4 REMARK 620 6 HOH G 394 O 100.8 174.5 74.2 87.1 93.4 REMARK 620 7 HOH G 410 O 78.2 101.0 141.0 158.2 76.7 83.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN G 202 DBREF 6I4D A 1 376 UNP Q8I4X0 ACT1_PLAF7 1 376 DBREF 6I4D G 1 125 UNP P13020 GELS_MOUSE 50 174 SEQADV 6I4D GLY A -1 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4D ALA A 0 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4D GLY G -1 UNP P13020 EXPRESSION TAG SEQADV 6I4D PRO G 0 UNP P13020 EXPRESSION TAG SEQADV 6I4D GLN G 54 UNP P13020 ASN 103 CONFLICT SEQADV 6I4D GLN G 56 UNP P13020 ASN 105 CONFLICT SEQRES 1 A 378 GLY ALA MET GLY GLU GLU ASP VAL GLN ALA LEU VAL VAL SEQRES 2 A 378 ASP ASN GLY SER GLY ASN VAL LYS ALA GLY VAL ALA GLY SEQRES 3 A 378 ASP ASP ALA PRO ARG SER VAL PHE PRO SER ILE VAL GLY SEQRES 4 A 378 ARG PRO LYS ASN PRO GLY ILE MET VAL GLY MET GLU GLU SEQRES 5 A 378 LYS ASP ALA PHE VAL GLY ASP GLU ALA GLN THR LYS ARG SEQRES 6 A 378 GLY ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE SEQRES 7 A 378 VAL THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS SEQRES 8 A 378 THR PHE TYR ASN GLU LEU ARG ALA ALA PRO GLU GLU HIS SEQRES 9 A 378 PRO VAL LEU LEU THR GLU ALA PRO LEU ASN PRO LYS GLY SEQRES 10 A 378 ASN ARG GLU ARG MET THR GLN ILE MET PHE GLU SER PHE SEQRES 11 A 378 ASN VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SEQRES 12 A 378 SER LEU TYR SER SER GLY ARG THR THR GLY ILE VAL LEU SEQRES 13 A 378 ASP SER GLY ASP GLY VAL SER HIS THR VAL PRO ILE TYR SEQRES 14 A 378 GLU GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP SEQRES 15 A 378 LEU ALA GLY ARG ASP LEU THR GLU TYR LEU MET LYS ILE SEQRES 16 A 378 LEU HIS GLU ARG GLY TYR GLY PHE SER THR SER ALA GLU SEQRES 17 A 378 LYS GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR SEQRES 18 A 378 ILE ALA LEU ASN PHE ASP GLU GLU MET LYS THR SER GLU SEQRES 19 A 378 GLN SER SER ASP ILE GLU LYS SER TYR GLU LEU PRO ASP SEQRES 20 A 378 GLY ASN ILE ILE THR VAL GLY ASN GLU ARG PHE ARG CYS SEQRES 21 A 378 PRO GLU ALA LEU PHE GLN PRO SER PHE LEU GLY LYS GLU SEQRES 22 A 378 ALA ALA GLY ILE HIS THR THR THR PHE ASN SER ILE LYS SEQRES 23 A 378 LYS CYS ASP VAL ASP ILE ARG LYS ASP LEU TYR GLY ASN SEQRES 24 A 378 ILE VAL LEU SER GLY GLY THR THR MET TYR GLU GLY ILE SEQRES 25 A 378 GLY GLU ARG LEU THR ARG ASP ILE THR THR LEU ALA PRO SEQRES 26 A 378 SER THR MET LYS ILE LYS VAL VAL ALA PRO PRO GLU ARG SEQRES 27 A 378 LYS TYR SER VAL TRP ILE GLY GLY SER ILE LEU SER SER SEQRES 28 A 378 LEU SER THR PHE GLN GLN MET TRP ILE THR LYS GLU GLU SEQRES 29 A 378 TYR ASP GLU SER GLY PRO SER ILE VAL HIS ARG LYS CYS SEQRES 30 A 378 PHE SEQRES 1 G 127 GLY PRO MET VAL VAL GLU HIS PRO GLU PHE LEU LYS ALA SEQRES 2 G 127 GLY LYS GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS SEQRES 3 G 127 PHE ASP LEU VAL PRO VAL PRO PRO ASN LEU TYR GLY ASP SEQRES 4 G 127 PHE PHE THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL SEQRES 5 G 127 GLN LEU ARG GLN GLY GLN LEU GLN TYR ASP LEU HIS TYR SEQRES 6 G 127 TRP LEU GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA SEQRES 7 G 127 ALA ALA ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN SEQRES 8 G 127 GLY ARG ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SEQRES 9 G 127 SER SER THR PHE SER GLY TYR PHE LYS SER GLY LEU LYS SEQRES 10 G 127 TYR LYS LYS GLY GLY VAL ALA SER GLY PHE HET ATP A 401 42 HET ADP A 402 39 HET MG A 403 1 HET K A 404 1 HET SCN A 405 3 HET BTB A 406 33 HET CL A 407 1 HET CA A 408 1 HET CA G 201 1 HET SCN G 202 3 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM SCN THIOCYANATE ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETSYN BTB BIS-TRIS BUFFER FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 MG MG 2+ FORMUL 6 K K 1+ FORMUL 7 SCN 2(C N S 1-) FORMUL 8 BTB C8 H19 N O5 FORMUL 9 CL CL 1- FORMUL 10 CA 2(CA 2+) FORMUL 13 HOH *689(H2 O) HELIX 1 AA1 GLY A 56 LYS A 62 1 7 HELIX 2 AA2 ASN A 79 ASN A 93 1 15 HELIX 3 AA3 ALA A 98 HIS A 102 5 5 HELIX 4 AA4 PRO A 113 SER A 127 1 15 HELIX 5 AA5 GLN A 138 SER A 146 1 9 HELIX 6 AA6 PRO A 173 ILE A 176 5 4 HELIX 7 AA7 ALA A 182 LEU A 194 1 13 HELIX 8 AA8 HIS A 195 GLY A 198 5 4 HELIX 9 AA9 THR A 203 CYS A 218 1 16 HELIX 10 AB1 ASN A 223 GLU A 232 1 10 HELIX 11 AB2 ASN A 253 ALA A 261 1 9 HELIX 12 AB3 LEU A 262 PHE A 263 5 2 HELIX 13 AB4 GLN A 264 GLY A 269 5 6 HELIX 14 AB5 GLY A 274 LYS A 285 1 12 HELIX 15 AB6 ASP A 287 GLY A 296 1 10 HELIX 16 AB7 GLY A 302 MET A 306 5 5 HELIX 17 AB8 GLY A 309 ALA A 322 1 14 HELIX 18 AB9 GLU A 335 LYS A 337 5 3 HELIX 19 AC1 TYR A 338 LEU A 350 1 13 HELIX 20 AC2 THR A 352 TRP A 357 1 6 HELIX 21 AC3 LYS A 360 GLU A 365 1 6 HELIX 22 AC4 HIS G 5 ALA G 11 1 7 HELIX 23 AC5 PRO G 31 TYR G 35 5 5 HELIX 24 AC6 SER G 70 LEU G 88 1 19 HELIX 25 AC7 SER G 103 GLY G 108 1 6 SHEET 1 AA1 6 SER A 30 PRO A 33 0 SHEET 2 AA1 6 ASN A 17 VAL A 22 -1 N ALA A 20 O SER A 30 SHEET 3 AA1 6 LEU A 9 ASN A 13 -1 N ASP A 12 O LYS A 19 SHEET 4 AA1 6 VAL A 104 GLU A 108 1 O LEU A 105 N LEU A 9 SHEET 5 AA1 6 ALA A 132 ILE A 137 1 O TYR A 134 N LEU A 106 SHEET 6 AA1 6 ILE A 358 THR A 359 -1 O ILE A 358 N MET A 133 SHEET 1 AA2 3 PHE A 54 VAL A 55 0 SHEET 2 AA2 3 VAL A 36 PRO A 39 -1 N GLY A 37 O PHE A 54 SHEET 3 AA2 3 LEU A 66 LYS A 69 -1 O THR A 67 N ARG A 38 SHEET 1 AA3 2 ILE A 72 GLU A 73 0 SHEET 2 AA3 2 ILE A 76 VAL A 77 -1 O ILE A 76 N GLU A 73 SHEET 1 AA4 3 TYR A 170 ALA A 171 0 SHEET 2 AA4 3 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA4 3 MET A 177 LEU A 179 -1 O LEU A 179 N SER A 161 SHEET 1 AA5 5 TYR A 170 ALA A 171 0 SHEET 2 AA5 5 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA5 5 GLY A 151 SER A 156 -1 N GLY A 151 O ILE A 166 SHEET 4 AA5 5 ILE A 298 SER A 301 1 O VAL A 299 N LEU A 154 SHEET 5 AA5 5 VAL A 330 VAL A 331 1 O VAL A 331 N LEU A 300 SHEET 1 AA6 2 LYS A 239 GLU A 242 0 SHEET 2 AA6 2 ILE A 248 VAL A 251 -1 O ILE A 249 N TYR A 241 SHEET 1 AA7 5 ASP G 26 PRO G 29 0 SHEET 2 AA7 5 GLY G 16 GLU G 23 -1 N ARG G 21 O VAL G 28 SHEET 3 AA7 5 ALA G 43 GLN G 51 -1 O VAL G 45 N TRP G 20 SHEET 4 AA7 5 LEU G 57 LEU G 65 -1 O HIS G 62 N ILE G 46 SHEET 5 AA7 5 VAL G 93 VAL G 98 1 O GLU G 97 N TYR G 63 SHEET 1 AA8 2 ASP G 37 PHE G 39 0 SHEET 2 AA8 2 LYS G 115 LYS G 117 1 O LYS G 115 N PHE G 38 LINK O AASP A 155 K A K A 404 1555 1555 3.36 LINK OD1AASP A 155 K A K A 404 1555 1555 2.96 LINK O VAL A 160 K A K A 404 1555 1555 2.82 LINK OE1 GLU A 168 CA CA A 408 1555 1555 2.69 LINK O2GAATP A 401 MG MG A 403 1555 1555 2.08 LINK O1BAATP A 401 MG MG A 403 1555 1555 2.02 LINK O1GAATP A 401 K A K A 404 1555 1555 3.33 LINK O2GAATP A 401 K A K A 404 1555 1555 2.80 LINK O1BBADP A 402 MG MG A 403 1555 1555 2.38 LINK MG MG A 403 O HOH A 562 1555 1555 2.09 LINK MG MG A 403 O HOH A 604 1555 1555 2.07 LINK MG MG A 403 O HOH A 605 1555 1555 2.09 LINK MG MG A 403 O HOH A 794 1555 1555 2.10 LINK MG MG A 403 O BHOH A 843 1555 1555 1.89 LINK K A K A 404 O HOH A 562 1555 1555 3.38 LINK K A K A 404 O HOH A 605 1555 1555 3.49 LINK K A K A 404 O HOH A 680 1555 1555 2.78 LINK CA CA A 408 OD1 ASP G 85 1555 1555 3.00 LINK CA CA A 408 OD2 ASP G 85 1555 1555 2.42 LINK CA CA A 408 O GLY G 90 1555 1555 2.60 LINK CA CA A 408 O ALA G 92 1555 1555 2.43 LINK CA CA A 408 O HOH G 412 1555 1555 2.25 LINK O GLY G 41 CA CA G 201 1555 1555 2.35 LINK OD1 ASP G 42 CA CA G 201 1555 1555 2.29 LINK OE1 GLU G 73 CA CA G 201 1555 1555 2.52 LINK OE2 GLU G 73 CA CA G 201 1555 1555 2.41 LINK O VAL G 121 CA CA G 201 1555 1555 2.37 LINK CA CA G 201 O HOH G 394 1555 1555 2.38 LINK CA CA G 201 O HOH G 410 1555 1555 2.41 SITE 1 AC1 35 GLY A 14 SER A 15 GLY A 16 ASN A 17 SITE 2 AC1 35 LYS A 19 GLY A 157 ASP A 158 GLY A 159 SITE 3 AC1 35 VAL A 160 GLY A 183 ARG A 211 LYS A 214 SITE 4 AC1 35 GLU A 215 GLY A 302 GLY A 303 THR A 304 SITE 5 AC1 35 MET A 306 TYR A 307 LYS A 337 ADP A 402 SITE 6 AC1 35 MG A 403 K A 404 HOH A 530 HOH A 538 SITE 7 AC1 35 HOH A 562 HOH A 578 HOH A 604 HOH A 605 SITE 8 AC1 35 HOH A 627 HOH A 664 HOH A 688 HOH A 728 SITE 9 AC1 35 HOH A 730 HOH A 794 HOH A 843 SITE 1 AC2 28 GLY A 14 SER A 15 GLY A 16 ASN A 17 SITE 2 AC2 28 LYS A 19 GLY A 157 ASP A 158 GLY A 183 SITE 3 AC2 28 ARG A 211 LYS A 214 GLU A 215 GLY A 303 SITE 4 AC2 28 THR A 304 MET A 306 TYR A 307 LYS A 337 SITE 5 AC2 28 ATP A 401 MG A 403 HOH A 530 HOH A 538 SITE 6 AC2 28 HOH A 604 HOH A 605 HOH A 627 HOH A 664 SITE 7 AC2 28 HOH A 688 HOH A 728 HOH A 730 HOH A 843 SITE 1 AC3 7 ATP A 401 ADP A 402 HOH A 562 HOH A 604 SITE 2 AC3 7 HOH A 605 HOH A 794 HOH A 843 SITE 1 AC4 6 ASP A 155 GLY A 157 VAL A 160 ATP A 401 SITE 2 AC4 6 HOH A 680 HOH A 843 SITE 1 AC5 7 TYR A 134 ALA A 136 ILE A 137 LEU A 347 SITE 2 AC5 7 HOH A 620 HOH A 731 HOH A 954 SITE 1 AC6 7 ARG A 29 SER A 30 GLU A 94 ARG A 96 SITE 2 AC6 7 HOH A 532 HOH A 577 HOH A 681 SITE 1 AC7 7 THR A 319 THR A 320 ALA A 322 SER A 324 SITE 2 AC7 7 HOH A 581 HOH A 899 HOH A 900 SITE 1 AC8 5 GLU A 168 ASP G 85 GLY G 90 ALA G 92 SITE 2 AC8 5 HOH G 412 SITE 1 AC9 6 GLY G 41 ASP G 42 GLU G 73 VAL G 121 SITE 2 AC9 6 HOH G 394 HOH G 410 SITE 1 AD1 9 ARG G 21 PRO G 31 PHE G 39 TYR G 44 SITE 2 AD1 9 HOH G 328 HOH G 336 HOH G 345 HOH G 432 SITE 3 AD1 9 HOH G 449 CRYST1 68.760 71.450 110.040 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014543 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009088 0.00000