HEADER TRANSCRIPTION 29-NOV-18 6IB8 TITLE STRUCTURE OF A COMPLEX OF SUHB AND NUSA AR2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSITOL-1-MONOPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: INOSITOL-1-PHOSPHATASE; COMPND 5 EC: 3.1.3.25; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRANSCRIPTION TERMINATION/ANTITERMINATION PROTEIN NUSA; COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: SUHB, SSYA, B2533, JW2517; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM-11; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 GENE: NUSA, ECS4050; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PETM-11 KEYWDS SUHB, NUSA AR2 DOMAIN, ANTITERMIANTION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.HUANG,B.LOLL,M.C.WAHL REVDAT 3 24-JAN-24 6IB8 1 LINK REVDAT 2 30-OCT-19 6IB8 1 JRNL REVDAT 1 17-APR-19 6IB8 0 JRNL AUTH Y.H.HUANG,N.SAID,B.LOLL,M.C.WAHL JRNL TITL STRUCTURAL BASIS FOR THE FUNCTION OF SUHB AS A TRANSCRIPTION JRNL TITL 2 FACTOR IN RIBOSOMAL RNA SYNTHESIS. JRNL REF NUCLEIC ACIDS RES. V. 47 6488 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31020314 JRNL DOI 10.1093/NAR/GKZ290 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 77933 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.690 REMARK 3 FREE R VALUE TEST SET COUNT : 2095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.6394 - 4.0560 0.98 5305 146 0.1788 0.2030 REMARK 3 2 4.0560 - 3.2205 0.99 5168 143 0.1660 0.2158 REMARK 3 3 3.2205 - 2.8137 1.00 5127 141 0.1735 0.1974 REMARK 3 4 2.8137 - 2.5566 1.00 5109 141 0.1653 0.2023 REMARK 3 5 2.5566 - 2.3734 1.00 5122 142 0.1657 0.1947 REMARK 3 6 2.3734 - 2.2335 1.00 5081 140 0.1665 0.2246 REMARK 3 7 2.2335 - 2.1217 1.00 5063 140 0.1627 0.2073 REMARK 3 8 2.1217 - 2.0294 1.00 5072 140 0.1682 0.1963 REMARK 3 9 2.0294 - 1.9513 1.00 5044 139 0.1824 0.2478 REMARK 3 10 1.9513 - 1.8839 1.00 5063 140 0.2109 0.2568 REMARK 3 11 1.8839 - 1.8250 1.00 5050 139 0.2234 0.2436 REMARK 3 12 1.8250 - 1.7729 1.00 5035 139 0.2452 0.2898 REMARK 3 13 1.7729 - 1.7262 1.00 5037 140 0.2868 0.3743 REMARK 3 14 1.7262 - 1.6841 1.00 5039 139 0.3160 0.3524 REMARK 3 15 1.6841 - 1.6458 0.90 4523 126 0.3764 0.4187 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 4932 REMARK 3 ANGLE : 1.009 6693 REMARK 3 CHIRALITY : 0.081 744 REMARK 3 PLANARITY : 0.006 891 REMARK 3 DIHEDRAL : 7.240 3936 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200013137. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : KMC-2 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78162 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.646 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2QFL, 1WCN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH 8.5, 5% (W/V) PEG REMARK 280 8000, 16% (V/V) PEG 300, 10% (V/V) GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.13500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.27100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.77000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.27100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.13500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.77000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 GLN A 33 REMARK 465 LYS A 34 REMARK 465 GLY A 35 REMARK 465 SER A 36 REMARK 465 ASN A 37 REMARK 465 ASP A 38 REMARK 465 LYS A 266 REMARK 465 ARG A 267 REMARK 465 ARG B 267 REMARK 465 GLY C 424 REMARK 465 ALA C 425 REMARK 465 MET C 426 REMARK 465 ASP C 427 REMARK 465 ASP C 493 REMARK 465 GLU C 494 REMARK 465 ALA C 495 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 401 O HOH A 472 1.90 REMARK 500 OD2 ASP A 84 O HOH A 401 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 433 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 97 48.98 -82.85 REMARK 500 ASP A 147 -167.32 -166.61 REMARK 500 ASP A 147 -167.32 -160.93 REMARK 500 ALA A 161 62.14 -150.11 REMARK 500 LYS B 34 -70.47 -74.92 REMARK 500 ASP B 147 -165.93 -162.28 REMARK 500 ALA B 161 66.00 -151.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PE4 A 304 REMARK 610 PE4 B 307 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 67 OE2 REMARK 620 2 ASP A 84 OD1 92.1 REMARK 620 3 LEU A 86 O 168.6 82.8 REMARK 620 4 HOH A 404 O 85.0 90.1 84.8 REMARK 620 5 HOH A 429 O 91.3 175.8 93.4 87.7 REMARK 620 6 HOH A 472 O 96.2 109.8 95.1 159.9 72.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 84 OD1 REMARK 620 2 LEU B 86 O 90.2 REMARK 620 3 HOH B 402 O 96.0 78.5 REMARK 620 4 HOH B 413 O 174.9 89.7 89.0 REMARK 620 5 HOH B 504 O 80.8 160.7 85.4 100.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE4 B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 501 DBREF 6IB8 A 1 267 UNP P0ADG4 SUHB_ECOLI 1 267 DBREF 6IB8 B 1 267 UNP P0ADG4 SUHB_ECOLI 1 267 DBREF 6IB8 C 427 495 UNP C3SSP1 C3SSP1_ECOLX 427 495 SEQADV 6IB8 GLY A -3 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 ALA A -2 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 MET A -1 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 ALA A 0 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 GLY B -3 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 ALA B -2 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 MET B -1 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 ALA B 0 UNP P0ADG4 EXPRESSION TAG SEQADV 6IB8 GLY C 424 UNP C3SSP1 EXPRESSION TAG SEQADV 6IB8 ALA C 425 UNP C3SSP1 EXPRESSION TAG SEQADV 6IB8 MET C 426 UNP C3SSP1 EXPRESSION TAG SEQRES 1 A 271 GLY ALA MET ALA MET HIS PRO MET LEU ASN ILE ALA VAL SEQRES 2 A 271 ARG ALA ALA ARG LYS ALA GLY ASN LEU ILE ALA LYS ASN SEQRES 3 A 271 TYR GLU THR PRO ASP ALA VAL GLU ALA SER GLN LYS GLY SEQRES 4 A 271 SER ASN ASP PHE VAL THR ASN VAL ASP LYS ALA ALA GLU SEQRES 5 A 271 ALA VAL ILE ILE ASP THR ILE ARG LYS SER TYR PRO GLN SEQRES 6 A 271 HIS THR ILE ILE THR GLU GLU SER GLY GLU LEU GLU GLY SEQRES 7 A 271 THR ASP GLN ASP VAL GLN TRP VAL ILE ASP PRO LEU ASP SEQRES 8 A 271 GLY THR THR ASN PHE ILE LYS ARG LEU PRO HIS PHE ALA SEQRES 9 A 271 VAL SER ILE ALA VAL ARG ILE LYS GLY ARG THR GLU VAL SEQRES 10 A 271 ALA VAL VAL TYR ASP PRO MET ARG ASN GLU LEU PHE THR SEQRES 11 A 271 ALA THR ARG GLY GLN GLY ALA GLN LEU ASN GLY TYR ARG SEQRES 12 A 271 LEU ARG GLY SER THR ALA ARG ASP LEU ASP GLY THR ILE SEQRES 13 A 271 LEU ALA THR GLY PHE PRO PHE LYS ALA LYS GLN TYR ALA SEQRES 14 A 271 THR THR TYR ILE ASN ILE VAL GLY LYS LEU PHE ASN GLU SEQRES 15 A 271 CYS ALA ASP PHE ARG ARG THR GLY SER ALA ALA LEU ASP SEQRES 16 A 271 LEU ALA TYR VAL ALA ALA GLY ARG VAL ASP GLY PHE PHE SEQRES 17 A 271 GLU ILE GLY LEU ARG PRO TRP ASP PHE ALA ALA GLY GLU SEQRES 18 A 271 LEU LEU VAL ARG GLU ALA GLY GLY ILE VAL SER ASP PHE SEQRES 19 A 271 THR GLY GLY HIS ASN TYR MET LEU THR GLY ASN ILE VAL SEQRES 20 A 271 ALA GLY ASN PRO ARG VAL VAL LYS ALA MET LEU ALA ASN SEQRES 21 A 271 MET ARG ASP GLU LEU SER ASP ALA LEU LYS ARG SEQRES 1 B 271 GLY ALA MET ALA MET HIS PRO MET LEU ASN ILE ALA VAL SEQRES 2 B 271 ARG ALA ALA ARG LYS ALA GLY ASN LEU ILE ALA LYS ASN SEQRES 3 B 271 TYR GLU THR PRO ASP ALA VAL GLU ALA SER GLN LYS GLY SEQRES 4 B 271 SER ASN ASP PHE VAL THR ASN VAL ASP LYS ALA ALA GLU SEQRES 5 B 271 ALA VAL ILE ILE ASP THR ILE ARG LYS SER TYR PRO GLN SEQRES 6 B 271 HIS THR ILE ILE THR GLU GLU SER GLY GLU LEU GLU GLY SEQRES 7 B 271 THR ASP GLN ASP VAL GLN TRP VAL ILE ASP PRO LEU ASP SEQRES 8 B 271 GLY THR THR ASN PHE ILE LYS ARG LEU PRO HIS PHE ALA SEQRES 9 B 271 VAL SER ILE ALA VAL ARG ILE LYS GLY ARG THR GLU VAL SEQRES 10 B 271 ALA VAL VAL TYR ASP PRO MET ARG ASN GLU LEU PHE THR SEQRES 11 B 271 ALA THR ARG GLY GLN GLY ALA GLN LEU ASN GLY TYR ARG SEQRES 12 B 271 LEU ARG GLY SER THR ALA ARG ASP LEU ASP GLY THR ILE SEQRES 13 B 271 LEU ALA THR GLY PHE PRO PHE LYS ALA LYS GLN TYR ALA SEQRES 14 B 271 THR THR TYR ILE ASN ILE VAL GLY LYS LEU PHE ASN GLU SEQRES 15 B 271 CYS ALA ASP PHE ARG ARG THR GLY SER ALA ALA LEU ASP SEQRES 16 B 271 LEU ALA TYR VAL ALA ALA GLY ARG VAL ASP GLY PHE PHE SEQRES 17 B 271 GLU ILE GLY LEU ARG PRO TRP ASP PHE ALA ALA GLY GLU SEQRES 18 B 271 LEU LEU VAL ARG GLU ALA GLY GLY ILE VAL SER ASP PHE SEQRES 19 B 271 THR GLY GLY HIS ASN TYR MET LEU THR GLY ASN ILE VAL SEQRES 20 B 271 ALA GLY ASN PRO ARG VAL VAL LYS ALA MET LEU ALA ASN SEQRES 21 B 271 MET ARG ASP GLU LEU SER ASP ALA LEU LYS ARG SEQRES 1 C 72 GLY ALA MET ASP ASN LYS PRO ALA ASP ASP LEU LEU ASN SEQRES 2 C 72 LEU GLU GLY VAL ASP ARG ASP LEU ALA PHE LYS LEU ALA SEQRES 3 C 72 ALA ARG GLY VAL CYS THR LEU GLU ASP LEU ALA GLU GLN SEQRES 4 C 72 GLY ILE ASP ASP LEU ALA ASP ILE GLU GLY LEU THR ASP SEQRES 5 C 72 GLU LYS ALA GLY ALA LEU ILE MET ALA ALA ARG ASN ILE SEQRES 6 C 72 CYS TRP PHE GLY ASP GLU ALA HET GOL A 301 6 HET GOL A 302 6 HET MG A 303 1 HET PE4 A 304 10 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HET GOL B 305 12 HET MG B 306 1 HET PE4 B 307 7 HET GOL C 501 6 HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN PE4 POLYETHYLENE GLYCOL PEG4000 FORMUL 4 GOL 8(C3 H8 O3) FORMUL 6 MG 2(MG 2+) FORMUL 7 PE4 2(C16 H34 O8) FORMUL 16 HOH *263(H2 O) HELIX 1 AA1 HIS A 2 GLU A 24 1 23 HELIX 2 AA2 ASP A 27 SER A 32 1 6 HELIX 3 AA3 ASN A 42 TYR A 59 1 18 HELIX 4 AA4 GLY A 88 LYS A 94 1 7 HELIX 5 AA5 ALA A 161 GLN A 163 5 3 HELIX 6 AA6 TYR A 164 ASN A 177 1 14 HELIX 7 AA7 SER A 187 ALA A 197 1 11 HELIX 8 AA8 ARG A 209 ALA A 223 1 15 HELIX 9 AA9 ASN A 235 GLY A 240 1 6 HELIX 10 AB1 ASN A 246 LEU A 265 1 20 HELIX 11 AB2 HIS B 2 THR B 25 1 24 HELIX 12 AB3 PRO B 26 VAL B 29 5 4 HELIX 13 AB4 ASN B 42 TYR B 59 1 18 HELIX 14 AB5 GLY B 88 ARG B 95 1 8 HELIX 15 AB6 ALA B 161 GLN B 163 5 3 HELIX 16 AB7 TYR B 164 ASN B 177 1 14 HELIX 17 AB8 SER B 187 ALA B 197 1 11 HELIX 18 AB9 ARG B 209 ALA B 223 1 15 HELIX 19 AC1 ASN B 235 GLY B 240 1 6 HELIX 20 AC2 ASN B 246 ARG B 258 1 13 HELIX 21 AC3 ASP B 259 LEU B 261 5 3 HELIX 22 AC4 ALA C 431 ASN C 436 1 6 HELIX 23 AC5 ASP C 441 ARG C 451 1 11 HELIX 24 AC6 THR C 455 GLU C 461 1 7 HELIX 25 AC7 GLY C 463 ALA C 468 5 6 HELIX 26 AC8 THR C 474 TRP C 490 1 17 SHEET 1 AA1 8 GLY A 70 LEU A 72 0 SHEET 2 AA1 8 HIS A 62 THR A 66 -1 N ILE A 64 O LEU A 72 SHEET 3 AA1 8 ASP A 76 ASP A 87 1 O TRP A 81 N ILE A 65 SHEET 4 AA1 8 ALA A 100 ILE A 107 -1 O ALA A 100 N ASP A 87 SHEET 5 AA1 8 ARG A 110 ASP A 118 -1 O GLU A 112 N VAL A 105 SHEET 6 AA1 8 GLU A 123 THR A 128 -1 O PHE A 125 N VAL A 116 SHEET 7 AA1 8 GLY A 132 LEU A 135 -1 O GLN A 134 N THR A 126 SHEET 8 AA1 8 TYR A 138 ARG A 139 -1 O TYR A 138 N LEU A 135 SHEET 1 AA2 5 ASP A 181 ARG A 183 0 SHEET 2 AA2 5 ILE A 152 THR A 155 1 N LEU A 153 O ASP A 181 SHEET 3 AA2 5 GLY A 202 GLU A 205 1 O GLY A 202 N ALA A 154 SHEET 4 AA2 5 ILE A 242 GLY A 245 -1 O ILE A 242 N GLU A 205 SHEET 5 AA2 5 ILE A 226 SER A 228 -1 N ILE A 226 O GLY A 245 SHEET 1 AA3 2 ALA B 31 GLY B 35 0 SHEET 2 AA3 2 ASP B 38 THR B 41 -1 O ASP B 38 N LYS B 34 SHEET 1 AA4 8 GLY B 70 LEU B 72 0 SHEET 2 AA4 8 HIS B 62 THR B 66 -1 N ILE B 64 O LEU B 72 SHEET 3 AA4 8 ASP B 76 ASP B 87 1 O TRP B 81 N ILE B 65 SHEET 4 AA4 8 ALA B 100 ILE B 107 -1 O ALA B 100 N ASP B 87 SHEET 5 AA4 8 ARG B 110 ASP B 118 -1 O GLU B 112 N VAL B 105 SHEET 6 AA4 8 GLU B 123 THR B 128 -1 O PHE B 125 N VAL B 116 SHEET 7 AA4 8 GLY B 132 LEU B 135 -1 O GLN B 134 N THR B 126 SHEET 8 AA4 8 TYR B 138 ARG B 139 -1 O TYR B 138 N LEU B 135 SHEET 1 AA5 5 ASP B 181 ARG B 183 0 SHEET 2 AA5 5 ILE B 152 THR B 155 1 N LEU B 153 O ASP B 181 SHEET 3 AA5 5 GLY B 202 GLU B 205 1 O GLY B 202 N ALA B 154 SHEET 4 AA5 5 ILE B 242 GLY B 245 -1 O ILE B 242 N GLU B 205 SHEET 5 AA5 5 ILE B 226 SER B 228 -1 N ILE B 226 O GLY B 245 LINK OE2AGLU A 67 MG MG A 303 1555 1555 2.26 LINK OD1 ASP A 84 MG MG A 303 1555 1555 2.23 LINK O LEU A 86 MG MG A 303 1555 1555 2.46 LINK MG MG A 303 O HOH A 404 1555 1555 2.23 LINK MG MG A 303 O HOH A 429 1555 1555 2.02 LINK MG MG A 303 O HOH A 472 1555 1555 2.18 LINK OD1 ASP B 84 MG MG B 306 1555 1555 2.28 LINK O LEU B 86 MG MG B 306 1555 1555 2.21 LINK MG MG B 306 O HOH B 402 1555 1555 2.23 LINK MG MG B 306 O HOH B 413 1555 1555 2.09 LINK MG MG B 306 O HOH B 504 1555 1555 2.57 SITE 1 AC1 7 ASP A 87 ARG A 184 GLY A 186 SER A 187 SITE 2 AC1 7 ALA A 188 GLU A 205 HOH A 432 SITE 1 AC2 8 ALA A 46 VAL A 50 ASP A 53 GLY B 130 SITE 2 AC2 8 GLN B 131 GLY B 132 ARG B 139 HOH B 419 SITE 1 AC3 6 GLU A 67 ASP A 84 LEU A 86 HOH A 404 SITE 2 AC3 6 HOH A 429 HOH A 472 SITE 1 AC4 5 TYR A 164 ILE A 206 GLY A 207 THR A 239 SITE 2 AC4 5 ASN A 241 SITE 1 AC5 8 ASP B 87 PHE B 159 ARG B 184 GLY B 186 SITE 2 AC5 8 SER B 187 ALA B 188 GLU B 205 HOH B 423 SITE 1 AC6 4 GLN A 80 ARG A 106 PRO A 210 HOH B 415 SITE 1 AC7 7 ARG B 106 ARG B 110 THR B 111 GLU B 217 SITE 2 AC7 7 TYR B 236 MET B 237 HOH B 473 SITE 1 AC8 3 THR A 89 GLY B -3 HOH B 477 SITE 1 AC9 7 HIS A 98 ARG A 121 THR A 185 HIS B 98 SITE 2 AC9 7 ARG B 121 THR B 185 TYR B 194 SITE 1 AD1 5 ASP B 84 LEU B 86 HOH B 402 HOH B 413 SITE 2 AD1 5 HOH B 504 SITE 1 AD2 2 ASN B 22 ASN B 42 SITE 1 AD3 6 GLY A 224 ILE A 226 GLU C 461 GLY C 463 SITE 2 AD3 6 ASP C 466 HOH C 606 CRYST1 64.270 95.540 104.542 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015559 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009566 0.00000