HEADER IMMUNE SYSTEM 18-SEP-18 6IF5 TITLE CRYSTAL STRUCTURE OF MONKEY TLR7 IN COMPLEX WITH 2',3'-CGMP (GUANOSINE TITLE 2 2',3'-CYCLIC PHOSPHATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 7; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 27-839; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_COMMON: RHESUS MACAQUE; SOURCE 4 ORGANISM_TAXID: 9544; SOURCE 5 GENE: TLR7; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227 KEYWDS INNATE IMMUNITY TOLL-LIKE RECEPTORS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,U.OHTO,T.SHIMIZU REVDAT 3 13-MAR-24 6IF5 1 JRNL HETSYN REVDAT 2 29-JUL-20 6IF5 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 30-JAN-19 6IF5 0 JRNL AUTH Z.ZHANG,U.OHTO,T.SHIBATA,M.TAOKA,Y.YAMAUCHI,R.SATO, JRNL AUTH 2 N.M.SHUKLA,S.A.DAVID,T.ISOBE,K.MIYAKE,T.SHIMIZU JRNL TITL STRUCTURAL ANALYSES OF TOLL-LIKE RECEPTOR 7 REVEAL DETAILED JRNL TITL 2 RNA SEQUENCE SPECIFICITY AND RECOGNITION MECHANISM OF JRNL TITL 3 AGONISTIC LIGANDS. JRNL REF CELL REP V. 25 3371 2018 JRNL REFN ESSN 2211-1247 JRNL PMID 30566863 JRNL DOI 10.1016/J.CELREP.2018.11.081 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 133746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 6843 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9803 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 516 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12533 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 403 REMARK 3 SOLVENT ATOMS : 824 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.811 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13289 ; 0.012 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 11935 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18075 ; 1.621 ; 1.690 REMARK 3 BOND ANGLES OTHERS (DEGREES): 28055 ; 0.932 ; 1.653 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1553 ; 7.366 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 673 ;37.247 ;23.150 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2350 ;15.566 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 68 ;22.506 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1770 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 14408 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2386 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6212 ; 3.450 ; 3.915 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6211 ; 3.444 ; 3.914 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7769 ; 4.452 ; 5.854 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 7766 ; 4.453 ; 5.855 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7077 ; 4.845 ; 4.516 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6990 ; 4.666 ; 4.466 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 10178 ; 6.771 ; 6.513 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 14450 ; 8.491 ;46.687 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 14297 ; 8.426 ;46.440 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6IF5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300009091. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133746 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, SODIUM REMARK 280 CITRATE PH 5.0, TRIS-HCL PH 7.5 AND NACL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 49.64250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.15000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.51950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.15000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.64250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.51950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -232.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 23 REMARK 465 SER B 24 REMARK 465 PRO B 25 REMARK 465 TRP B 26 REMARK 465 SER B 436 REMARK 465 GLY B 437 REMARK 465 ASP B 438 REMARK 465 SER B 439 REMARK 465 LEU B 440 REMARK 465 VAL B 441 REMARK 465 PRO B 442 REMARK 465 ARG B 443 REMARK 465 GLY B 444 REMARK 465 SER B 445 REMARK 465 SER B 446 REMARK 465 ASN B 447 REMARK 465 ALA B 448 REMARK 465 ARG B 449 REMARK 465 THR B 450 REMARK 465 SER B 451 REMARK 465 VAL B 452 REMARK 465 GLU B 453 REMARK 465 SER B 454 REMARK 465 TYR B 455 REMARK 465 GLU B 456 REMARK 465 PRO B 457 REMARK 465 GLN B 458 REMARK 465 PHE B 477 REMARK 465 LYS B 478 REMARK 465 ASN B 479 REMARK 465 LYS B 480 REMARK 465 GLU B 481 REMARK 465 ALA B 482 REMARK 465 SER B 483 REMARK 465 PHE B 484 REMARK 465 THR B 485 REMARK 465 SER B 486 REMARK 465 VAL B 487 REMARK 465 GLN B 488 REMARK 465 GLU B 489 REMARK 465 ASP B 836 REMARK 465 LEU B 837 REMARK 465 THR B 838 REMARK 465 ASN B 839 REMARK 465 GLU B 840 REMARK 465 PHE B 841 REMARK 465 LEU B 842 REMARK 465 VAL B 843 REMARK 465 PRO B 844 REMARK 465 ARG B 845 REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 TRP A 26 REMARK 465 SER A 436 REMARK 465 GLY A 437 REMARK 465 ASP A 438 REMARK 465 SER A 439 REMARK 465 LEU A 440 REMARK 465 VAL A 441 REMARK 465 PRO A 442 REMARK 465 ARG A 443 REMARK 465 GLY A 444 REMARK 465 SER A 445 REMARK 465 SER A 446 REMARK 465 ASN A 447 REMARK 465 ALA A 448 REMARK 465 ARG A 449 REMARK 465 THR A 450 REMARK 465 SER A 451 REMARK 465 VAL A 452 REMARK 465 GLU A 453 REMARK 465 SER A 454 REMARK 465 TYR A 455 REMARK 465 GLU A 456 REMARK 465 PRO A 457 REMARK 465 GLN A 458 REMARK 465 LYS A 478 REMARK 465 ASN A 479 REMARK 465 LYS A 480 REMARK 465 GLU A 481 REMARK 465 ALA A 482 REMARK 465 SER A 483 REMARK 465 PHE A 484 REMARK 465 THR A 485 REMARK 465 SER A 486 REMARK 465 VAL A 487 REMARK 465 GLN A 488 REMARK 465 GLU A 489 REMARK 465 ASP A 836 REMARK 465 LEU A 837 REMARK 465 THR A 838 REMARK 465 ASN A 839 REMARK 465 GLU A 840 REMARK 465 PHE A 841 REMARK 465 LEU A 842 REMARK 465 VAL A 843 REMARK 465 PRO A 844 REMARK 465 ARG A 845 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL B 459 CG1 CG2 REMARK 470 GLU B 461 CB CG CD OE1 OE2 REMARK 470 VAL A 459 CG1 CG2 REMARK 470 GLU A 461 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1133 O HOH B 1300 1.45 REMARK 500 O HOH B 1214 O HOH B 1353 1.63 REMARK 500 O HOH B 1214 O HOH B 1244 1.69 REMARK 500 O HOH A 1410 O HOH A 1417 1.80 REMARK 500 O HOH A 1407 O HOH A 1432 1.91 REMARK 500 O HOH A 1288 O HOH A 1413 1.93 REMARK 500 O HOH B 1481 O HOH B 1499 2.04 REMARK 500 SD MET B 236 O HOH B 1483 2.13 REMARK 500 O HOH B 1239 O HOH B 1448 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 376 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 MET B 602 CG - SD - CE ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO B 35 33.35 -77.01 REMARK 500 ILE B 74 65.00 61.84 REMARK 500 LEU B 88 59.90 -97.21 REMARK 500 CYS B 100 77.63 -158.20 REMARK 500 ASN B 158 -160.38 -109.94 REMARK 500 LEU B 171 32.75 -97.54 REMARK 500 CYS B 183 84.69 -157.75 REMARK 500 ASN B 187 62.50 -161.04 REMARK 500 ASN B 235 -161.69 -124.67 REMARK 500 CYS B 260 63.77 61.33 REMARK 500 ASN B 276 64.29 14.95 REMARK 500 ASN B 324 -156.62 -120.75 REMARK 500 ASP B 332 -74.97 -122.07 REMARK 500 VAL B 381 92.38 73.86 REMARK 500 ALA B 412 116.02 -160.97 REMARK 500 VAL B 430 71.23 65.71 REMARK 500 ASN B 503 -167.32 -123.30 REMARK 500 ASN B 527 -159.07 -108.11 REMARK 500 ASN B 552 -161.28 -121.90 REMARK 500 ASN B 552 -161.71 -121.90 REMARK 500 PHE B 562 -0.34 75.60 REMARK 500 ASN B 629 -169.66 -122.60 REMARK 500 ASN B 733 -162.42 -123.08 REMARK 500 ASN B 757 -162.03 -113.84 REMARK 500 ASN B 783 -148.68 -109.69 REMARK 500 ARG B 784 47.43 -142.44 REMARK 500 CYS B 787 63.88 -104.46 REMARK 500 THR B 810 -60.77 167.58 REMARK 500 HIS A 86 -74.47 -20.15 REMARK 500 LEU A 88 58.21 -94.43 REMARK 500 PHE A 96 50.29 -119.86 REMARK 500 CYS A 100 73.65 -151.42 REMARK 500 ARG A 121 17.88 88.71 REMARK 500 ASN A 158 -163.93 -106.84 REMARK 500 ASN A 187 67.73 -158.17 REMARK 500 LEU A 248 64.59 -101.47 REMARK 500 CYS A 260 64.91 60.82 REMARK 500 ASN A 324 -159.98 -120.67 REMARK 500 ASP A 332 -81.37 -125.18 REMARK 500 VAL A 381 91.81 73.92 REMARK 500 VAL A 430 71.64 59.49 REMARK 500 GLU A 461 154.44 -47.83 REMARK 500 TYR A 464 -58.61 -129.03 REMARK 500 CYS A 475 38.90 -141.97 REMARK 500 HIS A 515 12.77 83.62 REMARK 500 ASN A 527 -161.49 -106.86 REMARK 500 ASN A 552 -164.23 -124.01 REMARK 500 ASN A 552 -165.19 -124.01 REMARK 500 PHE A 562 -4.44 76.06 REMARK 500 ASN A 629 -166.42 -121.11 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 475 ARG A 476 148.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 97 0.12 SIDE CHAIN REMARK 500 ARG B 104 0.14 SIDE CHAIN REMARK 500 ARG B 357 0.09 SIDE CHAIN REMARK 500 ARG B 473 0.08 SIDE CHAIN REMARK 500 ARG B 476 0.16 SIDE CHAIN REMARK 500 ARG B 553 0.08 SIDE CHAIN REMARK 500 ARG B 622 0.24 SIDE CHAIN REMARK 500 ARG B 627 0.10 SIDE CHAIN REMARK 500 ARG A 28 0.13 SIDE CHAIN REMARK 500 ARG A 186 0.17 SIDE CHAIN REMARK 500 ARG A 357 0.08 SIDE CHAIN REMARK 500 ARG A 553 0.26 SIDE CHAIN REMARK 500 ARG A 614 0.16 SIDE CHAIN REMARK 500 ARG A 622 0.20 SIDE CHAIN REMARK 500 ARG A 750 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1468 DISTANCE = 5.99 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 23G A 1010 REMARK 610 23G A 1011 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RESIDUES 440-445 (SEVGFC) ARE REPLACED BY A THROMBIN-CLEAVAGE REMARK 999 SEQUENCE (LVPRGS) FOR ARTIFICIAL CLEAVAGE OF Z-LOOP. THIS REMARK 999 ENGINEERED SITE IN Z-LOOP WAS FURTHER CLEAVED DURING PURIFICATION REMARK 999 AND THE CLEAVED PROTEIN REMAINED ASSOCIATED VIA INTERACTIONS REMARK 999 BETWEEN LRRS AND A DISULFIDE BOND. THEREFORE, ALTHOUGH CLEAVED, THE REMARK 999 CLEAVED VERSION OF PROTEIN IS CONSIDERED AS ONE SINGLE COMPONENT REMARK 999 (CHAIN). DBREF 6IF5 B 27 839 UNP B3Y653 B3Y653_MACMU 27 839 DBREF 6IF5 A 27 839 UNP B3Y653 B3Y653_MACMU 27 839 SEQADV 6IF5 ARG B 23 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 SER B 24 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PRO B 25 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 TRP B 26 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 GLN B 167 UNP B3Y653 ASN 167 ENGINEERED MUTATION SEQADV 6IF5 GLN B 389 UNP B3Y653 ASN 389 ENGINEERED MUTATION SEQADV 6IF5 LEU B 440 UNP B3Y653 SER 440 SEE SEQUENCE DETAILS SEQADV 6IF5 VAL B 441 UNP B3Y653 GLU 441 SEE SEQUENCE DETAILS SEQADV 6IF5 PRO B 442 UNP B3Y653 VAL 442 SEE SEQUENCE DETAILS SEQADV 6IF5 ARG B 443 UNP B3Y653 GLY 443 SEE SEQUENCE DETAILS SEQADV 6IF5 GLY B 444 UNP B3Y653 PHE 444 SEE SEQUENCE DETAILS SEQADV 6IF5 SER B 445 UNP B3Y653 CYS 445 SEE SEQUENCE DETAILS SEQADV 6IF5 GLN B 488 UNP B3Y653 ASN 488 ENGINEERED MUTATION SEQADV 6IF5 GLN B 799 UNP B3Y653 ASN 799 ENGINEERED MUTATION SEQADV 6IF5 GLU B 840 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PHE B 841 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 LEU B 842 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 VAL B 843 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PRO B 844 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 ARG B 845 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 ARG A 23 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 SER A 24 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PRO A 25 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 TRP A 26 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 GLN A 167 UNP B3Y653 ASN 167 ENGINEERED MUTATION SEQADV 6IF5 GLN A 389 UNP B3Y653 ASN 389 ENGINEERED MUTATION SEQADV 6IF5 LEU A 440 UNP B3Y653 SER 440 SEE SEQUENCE DETAILS SEQADV 6IF5 VAL A 441 UNP B3Y653 GLU 441 SEE SEQUENCE DETAILS SEQADV 6IF5 PRO A 442 UNP B3Y653 VAL 442 SEE SEQUENCE DETAILS SEQADV 6IF5 ARG A 443 UNP B3Y653 GLY 443 SEE SEQUENCE DETAILS SEQADV 6IF5 GLY A 444 UNP B3Y653 PHE 444 SEE SEQUENCE DETAILS SEQADV 6IF5 SER A 445 UNP B3Y653 CYS 445 SEE SEQUENCE DETAILS SEQADV 6IF5 GLN A 488 UNP B3Y653 ASN 488 ENGINEERED MUTATION SEQADV 6IF5 GLN A 799 UNP B3Y653 ASN 799 ENGINEERED MUTATION SEQADV 6IF5 GLU A 840 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PHE A 841 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 LEU A 842 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 VAL A 843 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 PRO A 844 UNP B3Y653 EXPRESSION TAG SEQADV 6IF5 ARG A 845 UNP B3Y653 EXPRESSION TAG SEQRES 1 B 823 ARG SER PRO TRP ALA ARG TRP PHE PRO LYS THR LEU PRO SEQRES 2 B 823 CYS ASP VAL THR LEU ASP VAL SER LYS ASN HIS VAL ILE SEQRES 3 B 823 VAL ASP CYS THR ASP LYS HIS LEU THR GLU ILE PRO GLY SEQRES 4 B 823 GLY ILE PRO THR ASN THR THR ASN LEU THR LEU THR ILE SEQRES 5 B 823 ASN HIS ILE PRO ASP ILE SER PRO ALA SER PHE HIS ARG SEQRES 6 B 823 LEU VAL HIS LEU VAL GLU ILE ASP PHE ARG CYS ASN CYS SEQRES 7 B 823 VAL PRO ILE ARG LEU GLY SER LYS SER ASN MET CYS PRO SEQRES 8 B 823 ARG ARG LEU GLN ILE LYS PRO ARG SER PHE SER GLY LEU SEQRES 9 B 823 THR TYR LEU LYS SER LEU TYR LEU ASP GLY ASN GLN LEU SEQRES 10 B 823 LEU GLU ILE PRO GLN GLY LEU PRO PRO SER LEU GLN LEU SEQRES 11 B 823 LEU SER LEU GLU ALA ASN ASN ILE PHE SER ILE ARG LYS SEQRES 12 B 823 GLU GLN LEU THR GLU LEU ALA ASN ILE GLU ILE LEU TYR SEQRES 13 B 823 LEU GLY GLN ASN CYS TYR TYR ARG ASN PRO CYS TYR VAL SEQRES 14 B 823 SER TYR SER ILE GLU LYS ASP ALA PHE LEU ASN LEU THR SEQRES 15 B 823 LYS LEU LYS VAL LEU SER LEU LYS ASP ASN ASN VAL THR SEQRES 16 B 823 THR VAL PRO THR VAL LEU PRO SER THR LEU THR GLU LEU SEQRES 17 B 823 TYR LEU TYR ASN ASN MET ILE ALA GLU ILE GLN GLU ASP SEQRES 18 B 823 ASP PHE ASN ASN LEU ASN GLN LEU GLN ILE LEU ASP LEU SEQRES 19 B 823 SER GLY ASN CYS PRO ARG CYS TYR ASN ALA PRO PHE PRO SEQRES 20 B 823 CYS THR PRO CYS LYS ASN ASN SER PRO LEU GLN ILE PRO SEQRES 21 B 823 VAL ASN ALA PHE ASP ALA LEU THR GLU LEU LYS VAL LEU SEQRES 22 B 823 ARG LEU HIS SER ASN SER LEU GLN HIS VAL PRO PRO ARG SEQRES 23 B 823 TRP PHE LYS ASN ILE ASN ASN LEU GLN GLU LEU ASP LEU SEQRES 24 B 823 SER GLN ASN PHE LEU ALA LYS GLU ILE GLY ASP ALA LYS SEQRES 25 B 823 PHE LEU HIS PHE LEU PRO ASN LEU ILE GLN LEU ASP LEU SEQRES 26 B 823 SER PHE ASN PHE GLU LEU GLN VAL TYR ARG ALA SER MET SEQRES 27 B 823 ASN LEU SER GLN ALA PHE SER SER LEU LYS SER LEU LYS SEQRES 28 B 823 ILE LEU ARG ILE ARG GLY TYR VAL PHE LYS GLU LEU LYS SEQRES 29 B 823 SER PHE GLN LEU SER PRO LEU HIS ASN LEU GLN ASN LEU SEQRES 30 B 823 GLU VAL LEU ASP LEU GLY THR ASN PHE ILE LYS ILE ALA SEQRES 31 B 823 ASN LEU SER MET PHE LYS GLN PHE LYS ARG LEU LYS VAL SEQRES 32 B 823 ILE ASP LEU SER VAL ASN LYS ILE SER PRO SER GLY ASP SEQRES 33 B 823 SER LEU VAL PRO ARG GLY SER SER ASN ALA ARG THR SER SEQRES 34 B 823 VAL GLU SER TYR GLU PRO GLN VAL LEU GLU GLN LEU TYR SEQRES 35 B 823 TYR PHE ARG TYR ASP LYS TYR ALA ARG SER CYS ARG PHE SEQRES 36 B 823 LYS ASN LYS GLU ALA SER PHE THR SER VAL GLN GLU SER SEQRES 37 B 823 CYS TYR LYS TYR GLY GLN THR LEU ASP LEU SER LYS ASN SEQRES 38 B 823 SER ILE PHE PHE ILE LYS SER SER ASP PHE GLN HIS LEU SEQRES 39 B 823 SER PHE LEU LYS CYS LEU ASN LEU SER GLY ASN LEU ILE SEQRES 40 B 823 SER GLN THR LEU ASN GLY SER GLU PHE GLN PRO LEU ALA SEQRES 41 B 823 GLU LEU ARG TYR LEU ASP PHE SER ASN ASN ARG LEU ASP SEQRES 42 B 823 LEU LEU HIS SER THR ALA PHE GLU GLU LEU ARG LYS LEU SEQRES 43 B 823 GLU VAL LEU ASP ILE SER SER ASN SER HIS TYR PHE GLN SEQRES 44 B 823 SER GLU GLY ILE THR HIS MET LEU ASN PHE THR LYS ASN SEQRES 45 B 823 LEU LYS VAL LEU GLN LYS LEU MET MET ASN ASP ASN ASP SEQRES 46 B 823 ILE SER SER SER THR SER ARG THR MET GLU SER GLU SER SEQRES 47 B 823 LEU ARG THR LEU GLU PHE ARG GLY ASN HIS LEU ASP VAL SEQRES 48 B 823 LEU TRP ARG ASP GLY ASP ASN ARG TYR LEU GLN LEU PHE SEQRES 49 B 823 LYS ASN LEU LEU LYS LEU GLU GLU LEU ASP ILE SER LYS SEQRES 50 B 823 ASN SER LEU SER PHE LEU PRO SER GLY VAL PHE ASP GLY SEQRES 51 B 823 MET PRO PRO ASN LEU LYS ASN LEU SER LEU ALA LYS ASN SEQRES 52 B 823 GLY LEU LYS SER PHE ILE TRP GLU LYS LEU ARG TYR LEU SEQRES 53 B 823 LYS ASN LEU GLU THR LEU ASP LEU SER HIS ASN GLN LEU SEQRES 54 B 823 THR THR VAL PRO GLU ARG LEU SER ASN CYS SER ARG SER SEQRES 55 B 823 LEU LYS ASN LEU ILE LEU LYS ASN ASN GLN ILE ARG SER SEQRES 56 B 823 LEU THR LYS TYR PHE LEU GLN ASP ALA PHE GLN LEU ARG SEQRES 57 B 823 TYR LEU ASP LEU SER SER ASN LYS ILE GLN MET ILE GLN SEQRES 58 B 823 LYS THR SER PHE PRO GLU ASN VAL LEU ASN ASN LEU LYS SEQRES 59 B 823 MET LEU LEU LEU HIS HIS ASN ARG PHE LEU CYS THR CYS SEQRES 60 B 823 ASP ALA VAL TRP PHE VAL TRP TRP VAL GLN HIS THR GLU SEQRES 61 B 823 VAL THR ILE PRO TYR LEU ALA THR ASP VAL THR CYS VAL SEQRES 62 B 823 GLY PRO GLY ALA HIS LYS GLY GLN SER VAL ILE SER LEU SEQRES 63 B 823 ASP LEU TYR THR CYS GLU LEU ASP LEU THR ASN GLU PHE SEQRES 64 B 823 LEU VAL PRO ARG SEQRES 1 A 823 ARG SER PRO TRP ALA ARG TRP PHE PRO LYS THR LEU PRO SEQRES 2 A 823 CYS ASP VAL THR LEU ASP VAL SER LYS ASN HIS VAL ILE SEQRES 3 A 823 VAL ASP CYS THR ASP LYS HIS LEU THR GLU ILE PRO GLY SEQRES 4 A 823 GLY ILE PRO THR ASN THR THR ASN LEU THR LEU THR ILE SEQRES 5 A 823 ASN HIS ILE PRO ASP ILE SER PRO ALA SER PHE HIS ARG SEQRES 6 A 823 LEU VAL HIS LEU VAL GLU ILE ASP PHE ARG CYS ASN CYS SEQRES 7 A 823 VAL PRO ILE ARG LEU GLY SER LYS SER ASN MET CYS PRO SEQRES 8 A 823 ARG ARG LEU GLN ILE LYS PRO ARG SER PHE SER GLY LEU SEQRES 9 A 823 THR TYR LEU LYS SER LEU TYR LEU ASP GLY ASN GLN LEU SEQRES 10 A 823 LEU GLU ILE PRO GLN GLY LEU PRO PRO SER LEU GLN LEU SEQRES 11 A 823 LEU SER LEU GLU ALA ASN ASN ILE PHE SER ILE ARG LYS SEQRES 12 A 823 GLU GLN LEU THR GLU LEU ALA ASN ILE GLU ILE LEU TYR SEQRES 13 A 823 LEU GLY GLN ASN CYS TYR TYR ARG ASN PRO CYS TYR VAL SEQRES 14 A 823 SER TYR SER ILE GLU LYS ASP ALA PHE LEU ASN LEU THR SEQRES 15 A 823 LYS LEU LYS VAL LEU SER LEU LYS ASP ASN ASN VAL THR SEQRES 16 A 823 THR VAL PRO THR VAL LEU PRO SER THR LEU THR GLU LEU SEQRES 17 A 823 TYR LEU TYR ASN ASN MET ILE ALA GLU ILE GLN GLU ASP SEQRES 18 A 823 ASP PHE ASN ASN LEU ASN GLN LEU GLN ILE LEU ASP LEU SEQRES 19 A 823 SER GLY ASN CYS PRO ARG CYS TYR ASN ALA PRO PHE PRO SEQRES 20 A 823 CYS THR PRO CYS LYS ASN ASN SER PRO LEU GLN ILE PRO SEQRES 21 A 823 VAL ASN ALA PHE ASP ALA LEU THR GLU LEU LYS VAL LEU SEQRES 22 A 823 ARG LEU HIS SER ASN SER LEU GLN HIS VAL PRO PRO ARG SEQRES 23 A 823 TRP PHE LYS ASN ILE ASN ASN LEU GLN GLU LEU ASP LEU SEQRES 24 A 823 SER GLN ASN PHE LEU ALA LYS GLU ILE GLY ASP ALA LYS SEQRES 25 A 823 PHE LEU HIS PHE LEU PRO ASN LEU ILE GLN LEU ASP LEU SEQRES 26 A 823 SER PHE ASN PHE GLU LEU GLN VAL TYR ARG ALA SER MET SEQRES 27 A 823 ASN LEU SER GLN ALA PHE SER SER LEU LYS SER LEU LYS SEQRES 28 A 823 ILE LEU ARG ILE ARG GLY TYR VAL PHE LYS GLU LEU LYS SEQRES 29 A 823 SER PHE GLN LEU SER PRO LEU HIS ASN LEU GLN ASN LEU SEQRES 30 A 823 GLU VAL LEU ASP LEU GLY THR ASN PHE ILE LYS ILE ALA SEQRES 31 A 823 ASN LEU SER MET PHE LYS GLN PHE LYS ARG LEU LYS VAL SEQRES 32 A 823 ILE ASP LEU SER VAL ASN LYS ILE SER PRO SER GLY ASP SEQRES 33 A 823 SER LEU VAL PRO ARG GLY SER SER ASN ALA ARG THR SER SEQRES 34 A 823 VAL GLU SER TYR GLU PRO GLN VAL LEU GLU GLN LEU TYR SEQRES 35 A 823 TYR PHE ARG TYR ASP LYS TYR ALA ARG SER CYS ARG PHE SEQRES 36 A 823 LYS ASN LYS GLU ALA SER PHE THR SER VAL GLN GLU SER SEQRES 37 A 823 CYS TYR LYS TYR GLY GLN THR LEU ASP LEU SER LYS ASN SEQRES 38 A 823 SER ILE PHE PHE ILE LYS SER SER ASP PHE GLN HIS LEU SEQRES 39 A 823 SER PHE LEU LYS CYS LEU ASN LEU SER GLY ASN LEU ILE SEQRES 40 A 823 SER GLN THR LEU ASN GLY SER GLU PHE GLN PRO LEU ALA SEQRES 41 A 823 GLU LEU ARG TYR LEU ASP PHE SER ASN ASN ARG LEU ASP SEQRES 42 A 823 LEU LEU HIS SER THR ALA PHE GLU GLU LEU ARG LYS LEU SEQRES 43 A 823 GLU VAL LEU ASP ILE SER SER ASN SER HIS TYR PHE GLN SEQRES 44 A 823 SER GLU GLY ILE THR HIS MET LEU ASN PHE THR LYS ASN SEQRES 45 A 823 LEU LYS VAL LEU GLN LYS LEU MET MET ASN ASP ASN ASP SEQRES 46 A 823 ILE SER SER SER THR SER ARG THR MET GLU SER GLU SER SEQRES 47 A 823 LEU ARG THR LEU GLU PHE ARG GLY ASN HIS LEU ASP VAL SEQRES 48 A 823 LEU TRP ARG ASP GLY ASP ASN ARG TYR LEU GLN LEU PHE SEQRES 49 A 823 LYS ASN LEU LEU LYS LEU GLU GLU LEU ASP ILE SER LYS SEQRES 50 A 823 ASN SER LEU SER PHE LEU PRO SER GLY VAL PHE ASP GLY SEQRES 51 A 823 MET PRO PRO ASN LEU LYS ASN LEU SER LEU ALA LYS ASN SEQRES 52 A 823 GLY LEU LYS SER PHE ILE TRP GLU LYS LEU ARG TYR LEU SEQRES 53 A 823 LYS ASN LEU GLU THR LEU ASP LEU SER HIS ASN GLN LEU SEQRES 54 A 823 THR THR VAL PRO GLU ARG LEU SER ASN CYS SER ARG SER SEQRES 55 A 823 LEU LYS ASN LEU ILE LEU LYS ASN ASN GLN ILE ARG SER SEQRES 56 A 823 LEU THR LYS TYR PHE LEU GLN ASP ALA PHE GLN LEU ARG SEQRES 57 A 823 TYR LEU ASP LEU SER SER ASN LYS ILE GLN MET ILE GLN SEQRES 58 A 823 LYS THR SER PHE PRO GLU ASN VAL LEU ASN ASN LEU LYS SEQRES 59 A 823 MET LEU LEU LEU HIS HIS ASN ARG PHE LEU CYS THR CYS SEQRES 60 A 823 ASP ALA VAL TRP PHE VAL TRP TRP VAL GLN HIS THR GLU SEQRES 61 A 823 VAL THR ILE PRO TYR LEU ALA THR ASP VAL THR CYS VAL SEQRES 62 A 823 GLY PRO GLY ALA HIS LYS GLY GLN SER VAL ILE SER LEU SEQRES 63 A 823 ASP LEU TYR THR CYS GLU LEU ASP LEU THR ASN GLU PHE SEQRES 64 A 823 LEU VAL PRO ARG HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG B1001 14 HET NAG B1002 14 HET NAG B1003 14 HET NAG B1004 14 HET NAG B1007 14 HET NAG B1008 14 HET NAG B1009 14 HET SO4 B1010 5 HET SO4 B1011 5 HET SO4 B1012 5 HET SO4 B1013 5 HET SO4 B1014 5 HET SO4 B1015 5 HET SO4 B1016 5 HET SO4 B1017 5 HET SO4 B1018 5 HET SO4 B1019 5 HET SO4 B1020 5 HET SO4 B1021 5 HET SO4 B1022 5 HET NAG A1001 14 HET NAG A1004 14 HET NAG A1005 14 HET NAG A1006 14 HET NAG A1007 14 HET NAG A1008 14 HET NAG A1009 14 HET 23G A1010 23 HET 23G A1011 23 HET SO4 A1012 5 HET SO4 A1013 5 HET SO4 A1014 5 HET SO4 A1015 5 HET SO4 A1016 5 HET SO4 A1017 5 HET SO4 A1018 5 HET SO4 A1019 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM 23G GUANOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 18(C8 H15 N O6) FORMUL 12 SO4 21(O4 S 2-) FORMUL 32 23G 2(C10 H13 N5 O10 P2) FORMUL 42 HOH *824(H2 O) HELIX 1 AA1 PRO B 102 GLY B 106 5 5 HELIX 2 AA2 ARG B 164 THR B 169 1 6 HELIX 3 AA3 GLU B 170 ALA B 172 5 3 HELIX 4 AA4 CYS B 273 SER B 277 5 5 HELIX 5 AA5 PRO B 306 LYS B 311 5 6 HELIX 6 AA6 LEU B 326 GLY B 331 1 6 HELIX 7 AA7 ASP B 332 LEU B 339 5 8 HELIX 8 AA8 SER B 363 LEU B 369 5 7 HELIX 9 AA9 LYS B 386 HIS B 394 5 9 HELIX 10 AB1 LEU B 414 LYS B 421 5 8 HELIX 11 AB2 CYS B 491 GLY B 495 5 5 HELIX 12 AB3 LYS B 509 GLN B 514 5 6 HELIX 13 AB4 SER B 577 SER B 582 5 6 HELIX 14 AB5 MET B 588 LEU B 595 5 8 HELIX 15 AB6 HIS B 630 TRP B 635 1 6 HELIX 16 AB7 ILE B 691 LEU B 698 5 8 HELIX 17 AB8 ARG B 717 CYS B 721 5 5 HELIX 18 AB9 GLN B 763 PHE B 767 5 5 HELIX 19 AC1 PRO B 768 ASN B 773 1 6 HELIX 20 AC2 THR B 788 ASP B 790 5 3 HELIX 21 AC3 ALA B 791 THR B 801 1 11 HELIX 22 AC4 PRO B 817 LYS B 821 5 5 HELIX 23 AC5 SER B 824 LEU B 828 5 5 HELIX 24 AC6 LEU B 830 LEU B 835 5 6 HELIX 25 AC7 VAL A 42 ASN A 45 5 4 HELIX 26 AC8 SER A 81 HIS A 86 1 6 HELIX 27 AC9 ARG A 164 ALA A 172 5 9 HELIX 28 AD1 CYS A 273 SER A 277 5 5 HELIX 29 AD2 PRO A 306 LYS A 311 5 6 HELIX 30 AD3 LYS A 328 ASP A 332 5 5 HELIX 31 AD4 ALA A 333 LEU A 339 5 7 HELIX 32 AD5 SER A 363 LEU A 369 5 7 HELIX 33 AD6 LYS A 386 HIS A 394 5 9 HELIX 34 AD7 LEU A 414 LYS A 421 5 8 HELIX 35 AD8 CYS A 491 GLY A 495 5 5 HELIX 36 AD9 LYS A 509 GLN A 514 5 6 HELIX 37 AE1 SER A 577 SER A 582 5 6 HELIX 38 AE2 MET A 588 LEU A 595 5 8 HELIX 39 AE3 HIS A 630 TRP A 635 1 6 HELIX 40 AE4 ILE A 691 LEU A 698 5 8 HELIX 41 AE5 ARG A 717 CYS A 721 5 5 HELIX 42 AE6 PRO A 768 ASN A 773 1 6 HELIX 43 AE7 THR A 788 ASP A 790 5 3 HELIX 44 AE8 ALA A 791 THR A 801 1 11 HELIX 45 AE9 PRO A 817 LYS A 821 5 5 HELIX 46 AF1 SER A 824 LEU A 828 5 5 HELIX 47 AF2 LEU A 830 LEU A 835 5 6 SHEET 1 AA128 ASP B 37 ASP B 41 0 SHEET 2 AA128 HIS B 46 ASP B 50 -1 O ASP B 50 N ASP B 37 SHEET 3 AA128 ASN B 69 THR B 71 1 O ASN B 69 N VAL B 49 SHEET 4 AA128 GLU B 93 ASP B 95 1 O ASP B 95 N LEU B 70 SHEET 5 AA128 SER B 131 TYR B 133 1 O TYR B 133 N ILE B 94 SHEET 6 AA128 LEU B 152 SER B 154 1 O LEU B 152 N LEU B 132 SHEET 7 AA128 ILE B 176 TYR B 178 1 O TYR B 178 N LEU B 153 SHEET 8 AA128 VAL B 208 SER B 210 1 O VAL B 208 N LEU B 177 SHEET 9 AA128 GLU B 229 TYR B 231 1 O GLU B 229 N LEU B 209 SHEET 10 AA128 ILE B 253 ASP B 255 1 O ASP B 255 N LEU B 230 SHEET 11 AA128 VAL B 294 ARG B 296 1 O ARG B 296 N LEU B 254 SHEET 12 AA128 GLU B 318 ASP B 320 1 O GLU B 318 N LEU B 295 SHEET 13 AA128 GLN B 344 ASP B 346 1 O ASP B 346 N LEU B 319 SHEET 14 AA128 ILE B 374 ARG B 376 1 O ARG B 376 N LEU B 345 SHEET 15 AA128 VAL B 401 ASP B 403 1 O VAL B 401 N LEU B 375 SHEET 16 AA128 VAL B 425 ASP B 427 1 O ASP B 427 N LEU B 402 SHEET 17 AA128 THR B 497 ASP B 499 1 O ASP B 499 N ILE B 426 SHEET 18 AA128 CYS B 521 ASN B 523 1 O CYS B 521 N LEU B 498 SHEET 19 AA128 TYR B 546 ASP B 548 1 O TYR B 546 N LEU B 522 SHEET 20 AA128 VAL B 570 ASP B 572 1 O ASP B 572 N LEU B 547 SHEET 21 AA128 LYS B 600 MET B 602 1 O MET B 602 N LEU B 571 SHEET 22 AA128 THR B 623 GLU B 625 1 O GLU B 625 N LEU B 601 SHEET 23 AA128 GLU B 654 ASP B 656 1 O GLU B 654 N LEU B 624 SHEET 24 AA128 ASN B 679 SER B 681 1 O ASN B 679 N LEU B 655 SHEET 25 AA128 THR B 703 ASP B 705 1 O THR B 703 N LEU B 680 SHEET 26 AA128 ASN B 727 ILE B 729 1 O ASN B 727 N LEU B 704 SHEET 27 AA128 TYR B 751 ASP B 753 1 O TYR B 751 N LEU B 728 SHEET 28 AA128 MET B 777 LEU B 779 1 O LEU B 779 N LEU B 752 SHEET 1 AA2 2 ASP B 79 ILE B 80 0 SHEET 2 AA2 2 GLN B 117 ILE B 118 1 O GLN B 117 N ILE B 80 SHEET 1 AA3 2 SER B 162 ILE B 163 0 SHEET 2 AA3 2 SER B 194 ILE B 195 1 O SER B 194 N ILE B 163 SHEET 1 AA4 2 GLU B 384 LEU B 385 0 SHEET 2 AA4 2 ILE B 411 ALA B 412 1 O ILE B 411 N LEU B 385 SHEET 1 AA5 2 GLU B 617 SER B 618 0 SHEET 2 AA5 2 ASN B 648 LEU B 649 1 O ASN B 648 N SER B 618 SHEET 1 AA6 2 PHE B 785 LEU B 786 0 SHEET 2 AA6 2 CYS B 814 GLY B 816 1 O VAL B 815 N PHE B 785 SHEET 1 AA728 ASP A 37 ASP A 41 0 SHEET 2 AA728 HIS A 46 ASP A 50 -1 O ASP A 50 N ASP A 37 SHEET 3 AA728 ASN A 69 THR A 71 1 O ASN A 69 N VAL A 49 SHEET 4 AA728 GLU A 93 ASP A 95 1 O ASP A 95 N LEU A 70 SHEET 5 AA728 SER A 131 TYR A 133 1 O TYR A 133 N ILE A 94 SHEET 6 AA728 LEU A 152 SER A 154 1 O SER A 154 N LEU A 132 SHEET 7 AA728 ILE A 176 TYR A 178 1 O ILE A 176 N LEU A 153 SHEET 8 AA728 VAL A 208 SER A 210 1 O VAL A 208 N LEU A 177 SHEET 9 AA728 GLU A 229 TYR A 231 1 O TYR A 231 N LEU A 209 SHEET 10 AA728 ILE A 253 ASP A 255 1 O ILE A 253 N LEU A 230 SHEET 11 AA728 VAL A 294 ARG A 296 1 O ARG A 296 N LEU A 254 SHEET 12 AA728 GLU A 318 ASP A 320 1 O GLU A 318 N LEU A 295 SHEET 13 AA728 GLN A 344 ASP A 346 1 O ASP A 346 N LEU A 319 SHEET 14 AA728 ILE A 374 ARG A 376 1 O ARG A 376 N LEU A 345 SHEET 15 AA728 VAL A 401 ASP A 403 1 O ASP A 403 N LEU A 375 SHEET 16 AA728 VAL A 425 ASP A 427 1 O ASP A 427 N LEU A 402 SHEET 17 AA728 THR A 497 ASP A 499 1 O ASP A 499 N ILE A 426 SHEET 18 AA728 CYS A 521 ASN A 523 1 O ASN A 523 N LEU A 498 SHEET 19 AA728 TYR A 546 ASP A 548 1 O ASP A 548 N LEU A 522 SHEET 20 AA728 VAL A 570 ASP A 572 1 O ASP A 572 N LEU A 547 SHEET 21 AA728 LYS A 600 MET A 602 1 O MET A 602 N LEU A 571 SHEET 22 AA728 THR A 623 GLU A 625 1 O GLU A 625 N LEU A 601 SHEET 23 AA728 GLU A 654 ASP A 656 1 O GLU A 654 N LEU A 624 SHEET 24 AA728 ASN A 679 SER A 681 1 O ASN A 679 N LEU A 655 SHEET 25 AA728 THR A 703 ASP A 705 1 O THR A 703 N LEU A 680 SHEET 26 AA728 ASN A 727 ILE A 729 1 O ILE A 729 N LEU A 704 SHEET 27 AA728 TYR A 751 ASP A 753 1 O TYR A 751 N LEU A 728 SHEET 28 AA728 MET A 777 LEU A 779 1 O LEU A 779 N LEU A 752 SHEET 1 AA8 2 ASP A 79 ILE A 80 0 SHEET 2 AA8 2 GLN A 117 ILE A 118 1 O GLN A 117 N ILE A 80 SHEET 1 AA9 2 SER A 162 ILE A 163 0 SHEET 2 AA9 2 SER A 194 ILE A 195 1 O SER A 194 N ILE A 163 SHEET 1 AB1 2 GLU A 384 LEU A 385 0 SHEET 2 AB1 2 ILE A 411 ALA A 412 1 O ILE A 411 N LEU A 385 SHEET 1 AB2 2 GLU A 617 SER A 618 0 SHEET 2 AB2 2 ASN A 648 LEU A 649 1 O ASN A 648 N SER A 618 SHEET 1 AB3 2 PHE A 785 LEU A 786 0 SHEET 2 AB3 2 CYS A 814 GLY A 816 1 O VAL A 815 N PHE A 785 SSBOND 1 CYS B 36 CYS B 51 1555 1555 2.08 SSBOND 2 CYS B 98 CYS B 475 1555 1555 1.99 SSBOND 3 CYS B 100 CYS B 112 1555 1555 2.10 SSBOND 4 CYS B 183 CYS B 189 1555 1555 2.16 SSBOND 5 CYS B 260 CYS B 273 1555 1555 2.08 SSBOND 6 CYS B 263 CYS B 270 1555 1555 2.13 SSBOND 7 CYS B 491 CYS B 521 1555 1555 2.10 SSBOND 8 CYS B 787 CYS B 814 1555 1555 2.00 SSBOND 9 CYS B 789 CYS B 833 1555 1555 2.07 SSBOND 10 CYS A 36 CYS A 51 1555 1555 2.11 SSBOND 11 CYS A 98 CYS A 475 1555 1555 1.92 SSBOND 12 CYS A 100 CYS A 112 1555 1555 2.08 SSBOND 13 CYS A 183 CYS A 189 1555 1555 2.14 SSBOND 14 CYS A 260 CYS A 273 1555 1555 2.05 SSBOND 15 CYS A 263 CYS A 270 1555 1555 2.13 SSBOND 16 CYS A 491 CYS A 521 1555 1555 2.06 SSBOND 17 CYS A 787 CYS A 814 1555 1555 2.03 SSBOND 18 CYS A 789 CYS A 833 1555 1555 2.06 LINK ND2 ASN B 69 C1 NAG B1008 1555 1555 1.45 LINK ND2 ASN B 215 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 361 C1 NAG B1004 1555 1555 1.44 LINK ND2 ASN B 413 C1 NAG B1003 1555 1555 1.42 LINK ND2 ASN B 523 C1 NAG B1001 1555 1555 1.43 LINK ND2 ASN B 534 C1 NAG B1009 1555 1555 1.46 LINK ND2 ASN B 590 C1 NAG B1002 1555 1555 1.43 LINK ND2 ASN B 720 C1 NAG B1007 1555 1555 1.48 LINK ND2 ASN A 69 C1 NAG A1008 1555 1555 1.43 LINK ND2 ASN A 215 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 361 C1 NAG A1006 1555 1555 1.44 LINK ND2 ASN A 413 C1 NAG A1005 1555 1555 1.44 LINK ND2 ASN A 523 C1 NAG A1001 1555 1555 1.43 LINK ND2 ASN A 534 C1 NAG A1007 1555 1555 1.44 LINK ND2 ASN A 590 C1 NAG A1004 1555 1555 1.40 LINK ND2 ASN A 679 C1 NAG A1009 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 CISPEP 1 THR B 221 VAL B 222 0 -10.77 CISPEP 2 GLY B 816 PRO B 817 0 -8.05 CISPEP 3 THR A 221 VAL A 222 0 -8.96 CISPEP 4 GLY A 816 PRO A 817 0 -6.41 CRYST1 99.285 139.039 150.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010072 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007192 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006653 0.00000