HEADER SUGAR BINDING PROTEIN 19-SEP-18 6IFA TITLE STRUCTURE OF BETA-TREFOIL LECTIN FROM ENTAMOEBA HISTOLYTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA HM-1:IMSS; SOURCE 3 ORGANISM_TAXID: 294381; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS BETA-TREFOIL, LECTIN, ENTAMOEBA HISTOLYTICA, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.SUGUNA,F.KHAN REVDAT 3 23-OCT-24 6IFA 1 JRNL REVDAT 2 08-APR-20 6IFA 1 JRNL REVDAT 1 25-SEP-19 6IFA 0 JRNL AUTH F.KHAN,D.KURRE,K.SUGUNA JRNL TITL CRYSTAL STRUCTURES OF A BETA-TREFOIL LECTIN FROM ENTAMOEBA JRNL TITL 2 HISTOLYTICA IN MONOMERIC AND A NOVEL DISULFIDE BOND-MEDIATED JRNL TITL 3 DIMERIC FORMS. JRNL REF GLYCOBIOLOGY V. 30 474 2020 JRNL REFN ESSN 1460-2423 JRNL PMID 31967310 JRNL DOI 10.1093/GLYCOB/CWAA001 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38304 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.9500 - 1.9000 1.00 2558 135 0.2807 0.3459 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.246 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.664 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3194 REMARK 3 ANGLE : 0.801 4332 REMARK 3 CHIRALITY : 0.061 471 REMARK 3 PLANARITY : 0.005 564 REMARK 3 DIHEDRAL : 8.547 2596 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IFA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300009099. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9660 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 2018-04-27 REMARK 200 DATA SCALING SOFTWARE : XDS 2018-04-27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38368 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.23 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.43 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% ISO-PROPANOL, 0.1M MES REMARK 280 MONOHYDRATE, PH 6.0, 20% PEG MONOMETHYL ETHER 2000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 50.86600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 91.99800 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 50.86600 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 91.99800 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 50.86600 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 91.99800 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 50.86600 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 91.99800 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.86600 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 91.99800 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 50.86600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 91.99800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 50.86600 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 91.99800 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 50.86600 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 50.86600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 91.99800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 50.86600 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 50.86600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -91.99800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASN C 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 67 -48.96 -132.41 REMARK 500 HIS A 67 -51.92 -130.80 REMARK 500 ASN A 99 85.52 -155.24 REMARK 500 HIS B 67 -54.52 -130.60 REMARK 500 HIS B 67 -57.02 -129.29 REMARK 500 ASN B 99 86.03 -155.62 REMARK 500 HIS C 67 -49.95 -136.54 REMARK 500 HIS C 67 -51.53 -135.69 REMARK 500 ASN C 99 86.53 -155.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 359 DISTANCE = 8.08 ANGSTROMS REMARK 525 HOH A 360 DISTANCE = 10.99 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA C 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA C 604 DBREF 6IFA A 1 129 PDB 6IFA 6IFA 1 129 DBREF 6IFA B 1 129 PDB 6IFA 6IFA 1 129 DBREF 6IFA C 1 129 PDB 6IFA 6IFA 1 129 SEQRES 1 A 129 MET SER ASN GLU ALA HIS THR LEU VAL THR PRO GLU GLY SEQRES 2 A 129 ASN VAL ILE ASP ILE GLN GLY ALA SER GLN GLU ASN GLY SEQRES 3 A 129 ALA ASN ALA ILE ILE TYR PRO ARG HIS GLY GLY GLU ASN SEQRES 4 A 129 GLN LEU PHE PHE ILE ASP LYS GLN ILE GLY TRP ILE ILE SEQRES 5 A 129 SER VAL PHE SER ARG LYS ALA LEU THR VAL LYS GLU ASN SEQRES 6 A 129 MET HIS ASP ILE VAL GLN SER ASP TYR CYS SER LEU SER SEQRES 7 A 129 ARG GLN GLN TRP ILE PHE GLU ASP ASN PRO ASP GLY THR SEQRES 8 A 129 THR ILE ILE ARG CYS TYR GLU ASN PRO GLU LEU VAL LEU SEQRES 9 A 129 SER VAL THR GLY ASN ILE ASP LYS VAL CYS LEU SER PRO SEQRES 10 A 129 PHE THR ARG GLU ALA HIS GLN LEU TRP ARG ILE GLU SEQRES 1 B 129 MET SER ASN GLU ALA HIS THR LEU VAL THR PRO GLU GLY SEQRES 2 B 129 ASN VAL ILE ASP ILE GLN GLY ALA SER GLN GLU ASN GLY SEQRES 3 B 129 ALA ASN ALA ILE ILE TYR PRO ARG HIS GLY GLY GLU ASN SEQRES 4 B 129 GLN LEU PHE PHE ILE ASP LYS GLN ILE GLY TRP ILE ILE SEQRES 5 B 129 SER VAL PHE SER ARG LYS ALA LEU THR VAL LYS GLU ASN SEQRES 6 B 129 MET HIS ASP ILE VAL GLN SER ASP TYR CYS SER LEU SER SEQRES 7 B 129 ARG GLN GLN TRP ILE PHE GLU ASP ASN PRO ASP GLY THR SEQRES 8 B 129 THR ILE ILE ARG CYS TYR GLU ASN PRO GLU LEU VAL LEU SEQRES 9 B 129 SER VAL THR GLY ASN ILE ASP LYS VAL CYS LEU SER PRO SEQRES 10 B 129 PHE THR ARG GLU ALA HIS GLN LEU TRP ARG ILE GLU SEQRES 1 C 129 MET SER ASN GLU ALA HIS THR LEU VAL THR PRO GLU GLY SEQRES 2 C 129 ASN VAL ILE ASP ILE GLN GLY ALA SER GLN GLU ASN GLY SEQRES 3 C 129 ALA ASN ALA ILE ILE TYR PRO ARG HIS GLY GLY GLU ASN SEQRES 4 C 129 GLN LEU PHE PHE ILE ASP LYS GLN ILE GLY TRP ILE ILE SEQRES 5 C 129 SER VAL PHE SER ARG LYS ALA LEU THR VAL LYS GLU ASN SEQRES 6 C 129 MET HIS ASP ILE VAL GLN SER ASP TYR CYS SER LEU SER SEQRES 7 C 129 ARG GLN GLN TRP ILE PHE GLU ASP ASN PRO ASP GLY THR SEQRES 8 C 129 THR ILE ILE ARG CYS TYR GLU ASN PRO GLU LEU VAL LEU SEQRES 9 C 129 SER VAL THR GLY ASN ILE ASP LYS VAL CYS LEU SER PRO SEQRES 10 C 129 PHE THR ARG GLU ALA HIS GLN LEU TRP ARG ILE GLU HET GOL A 201 6 HET GOL A 202 6 HET IPA A 203 4 HET IPA A 204 4 HET GOL A 205 6 HET IPA A 206 4 HET GOL B 201 6 HET IPA B 202 4 HET IPA B 203 4 HET IPA B 204 4 HET IPA C 601 4 HET GOL C 602 6 HET IPA C 603 4 HET IPA C 604 4 HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL FORMUL 4 GOL 5(C3 H8 O3) FORMUL 6 IPA 9(C3 H8 O) FORMUL 18 HOH *171(H2 O) HELIX 1 AA1 GLY A 20 SER A 22 5 3 HELIX 2 AA2 GLY A 37 GLN A 40 5 4 HELIX 3 AA3 LEU A 77 GLN A 80 5 4 HELIX 4 AA4 GLU A 121 LEU A 125 5 5 HELIX 5 AA5 GLY B 20 SER B 22 5 3 HELIX 6 AA6 GLY B 37 GLN B 40 5 4 HELIX 7 AA7 LEU B 77 GLN B 80 5 4 HELIX 8 AA8 GLU B 121 LEU B 125 5 5 HELIX 9 AA9 GLY C 20 SER C 22 5 3 HELIX 10 AB1 GLY C 37 GLN C 40 5 4 HELIX 11 AB2 LEU C 77 GLN C 80 5 4 HELIX 12 AB3 GLU C 121 LEU C 125 5 5 SHEET 1 AA1 2 LEU A 8 VAL A 9 0 SHEET 2 AA1 2 ARG A 127 ILE A 128 -1 O ARG A 127 N VAL A 9 SHEET 1 AA2 2 VAL A 15 ILE A 18 0 SHEET 2 AA2 2 ALA A 29 TYR A 32 -1 O ILE A 30 N ASP A 17 SHEET 1 AA3 2 PHE A 42 ASP A 45 0 SHEET 2 AA3 2 TRP A 50 SER A 53 -1 O ILE A 52 N PHE A 43 SHEET 1 AA4 2 ALA A 59 VAL A 62 0 SHEET 2 AA4 2 ILE A 69 SER A 72 -1 O VAL A 70 N THR A 61 SHEET 1 AA5 2 TRP A 82 ASP A 86 0 SHEET 2 AA5 2 THR A 92 CYS A 96 -1 O ILE A 93 N GLU A 85 SHEET 1 AA6 2 LEU A 102 VAL A 106 0 SHEET 2 AA6 2 VAL A 113 PRO A 117 -1 O CYS A 114 N SER A 105 SHEET 1 AA7 2 LEU B 8 VAL B 9 0 SHEET 2 AA7 2 ARG B 127 ILE B 128 -1 O ARG B 127 N VAL B 9 SHEET 1 AA8 2 VAL B 15 ILE B 18 0 SHEET 2 AA8 2 ALA B 29 TYR B 32 -1 O ILE B 30 N ASP B 17 SHEET 1 AA9 2 PHE B 42 ILE B 44 0 SHEET 2 AA9 2 ILE B 51 SER B 53 -1 O ILE B 52 N PHE B 43 SHEET 1 AB1 2 ALA B 59 VAL B 62 0 SHEET 2 AB1 2 ILE B 69 SER B 72 -1 O VAL B 70 N THR B 61 SHEET 1 AB2 2 TRP B 82 ASP B 86 0 SHEET 2 AB2 2 THR B 92 CYS B 96 -1 O ILE B 93 N GLU B 85 SHEET 1 AB3 2 LEU B 102 VAL B 106 0 SHEET 2 AB3 2 VAL B 113 PRO B 117 -1 O CYS B 114 N SER B 105 SHEET 1 AB4 4 TRP C 50 SER C 53 0 SHEET 2 AB4 4 PHE C 42 ASP C 45 -1 N PHE C 43 O ILE C 52 SHEET 3 AB4 4 ALA C 5 VAL C 9 -1 N HIS C 6 O PHE C 42 SHEET 4 AB4 4 ARG C 127 GLU C 129 -1 O GLU C 129 N THR C 7 SHEET 1 AB5 2 VAL C 15 ILE C 18 0 SHEET 2 AB5 2 ALA C 29 TYR C 32 -1 O ILE C 30 N ASP C 17 SHEET 1 AB6 2 ALA C 59 VAL C 62 0 SHEET 2 AB6 2 ILE C 69 SER C 72 -1 O VAL C 70 N THR C 61 SHEET 1 AB7 2 TRP C 82 ASP C 86 0 SHEET 2 AB7 2 THR C 92 CYS C 96 -1 O ARG C 95 N ILE C 83 SHEET 1 AB8 2 LEU C 102 VAL C 106 0 SHEET 2 AB8 2 VAL C 113 PRO C 117 -1 O CYS C 114 N SER C 105 SSBOND 1 CYS A 75 CYS B 75 1555 1555 2.03 SSBOND 2 CYS C 75 CYS C 75 1555 16554 2.03 SITE 1 AC1 10 ASP A 17 ILE A 18 GLN A 19 GLY A 20 SITE 2 AC1 10 TYR A 32 HIS A 35 ASN A 39 HOH A 328 SITE 3 AC1 10 GLU B 101 PHE B 118 SITE 1 AC2 4 GLU A 38 ARG A 57 IPA A 203 HOH A 321 SITE 1 AC3 4 GLU A 38 PHE A 55 GOL A 202 ILE B 83 SITE 1 AC4 4 GLN A 47 ILE A 48 TRP A 82 HOH A 302 SITE 1 AC5 2 ASP A 45 HOH A 345 SITE 1 AC6 4 ILE A 83 GLU C 38 PHE C 55 IPA C 604 SITE 1 AC7 10 ASP B 17 ILE B 18 GLN B 19 GLY B 20 SITE 2 AC7 10 TYR B 32 HIS B 35 ASN B 39 HOH B 307 SITE 3 AC7 10 GLU C 101 PHE C 118 SITE 1 AC8 3 GLN B 47 ILE B 48 TRP B 82 SITE 1 AC9 6 GLN A 47 GLU B 38 PHE B 55 IPA B 204 SITE 2 AC9 6 ILE C 83 PHE C 84 SITE 1 AD1 3 GLU B 38 ARG B 57 IPA B 203 SITE 1 AD2 2 GLN B 19 GLU C 101 SITE 1 AD3 9 GLU A 101 PHE A 118 ASP C 17 ILE C 18 SITE 2 AD3 9 GLN C 19 GLY C 20 HIS C 35 ASN C 39 SITE 3 AD3 9 HOH C 717 SITE 1 AD4 4 GLN C 47 ILE C 48 GLN C 81 TRP C 82 SITE 1 AD5 3 IPA A 206 GLU C 38 ARG C 57 CRYST1 101.732 101.732 183.996 90.00 90.00 90.00 I 4 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009830 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009830 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005435 0.00000