HEADER TRANSFERASE 21-SEP-18 6IFX TITLE CRYSTAL STRUCTURE OF CHIMERIC KSGA WITH LOOP 12 FROM ERM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 16S RRNA (ADENINE(1518)-N(6)/ADENINE(1519)-N(6))- COMPND 5 DIMETHYLTRANSFERASE,16S RRNA DIMETHYLADENOSINE TRANSFERASE,16S RRNA COMPND 6 DIMETHYLASE,S-ADENOSYLMETHIONINE-6-N',N'-ADENOSYL(RRNA) COMPND 7 DIMETHYLTRANSFERASE; COMPND 8 EC: 2.1.1.182; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: CHIMERIC CONSTRUCT OF KSGA WHERE LOOP 12 RESIDUES (UNP COMPND 11 RESIDUES 164-172, UNIPROTKB-P37468 (RSMA_BACSU)) WERE EXCHANGED WITH COMPND 12 RESIDUES FROM ERMC' PROTEIN (NTKR). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: RSMA, KSGA, BSU00420; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHIMERA, RESISTANCE, KSGA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.BHUJBALRAO,R.ANAND REVDAT 3 27-MAR-24 6IFX 1 REMARK REVDAT 2 13-FEB-19 6IFX 1 JRNL REVDAT 1 06-FEB-19 6IFX 0 JRNL AUTH R.BHUJBALRAO,R.ANAND JRNL TITL DECIPHERING DETERMINANTS IN RIBOSOMAL METHYLTRANSFERASES JRNL TITL 2 THAT CONFER ANTIMICROBIAL RESISTANCE. JRNL REF J. AM. CHEM. SOC. V. 141 1425 2019 JRNL REFN ESSN 1520-5126 JRNL PMID 30624914 JRNL DOI 10.1021/JACS.8B10277 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 6971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.308 REMARK 3 R VALUE (WORKING SET) : 0.304 REMARK 3 FREE R VALUE : 0.385 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 349 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 494 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE SET COUNT : 23 REMARK 3 BIN FREE R VALUE : 0.4450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3403 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 1.040 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.939 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 64.354 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.880 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.810 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3439 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3213 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4698 ; 1.571 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7313 ; 1.103 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 8.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 111 ;41.176 ;25.045 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 491 ;20.561 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.144 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 627 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3799 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 621 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1900 ; 3.309 ; 6.736 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1901 ; 3.308 ; 6.735 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2344 ; 5.640 ;10.086 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2345 ; 5.639 ;10.085 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1539 ; 2.710 ; 6.882 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1540 ; 2.709 ; 6.881 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2355 ; 4.727 ;10.271 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3728 ; 9.049 ;85.303 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3729 ; 9.048 ;85.303 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 9 283 B 9 283 10888 0.14 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6IFX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7342 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.800 REMARK 200 RESOLUTION RANGE LOW (A) : 67.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.18500 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.53900 REMARK 200 FOR SHELL : 5.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CHLORIDE, 0.05M SODIUM REMARK 280 CACODYLATE TRIHYDRATE PH 6.0, 10% W/V POLYETHYLENE GLYCOL 4000, REMARK 280 0.0005M SPERMINE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.84650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.05750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.74950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.05750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.84650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.74950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 LYS A 3 REMARK 465 ASP A 4 REMARK 465 ILE A 5 REMARK 465 ALA A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 ILE A 14 REMARK 465 LEU A 15 REMARK 465 LYS A 16 REMARK 465 LYS A 17 REMARK 465 SER A 21 REMARK 465 PHE A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 GLY A 27 REMARK 465 GLY A 60 REMARK 465 ASP A 118 REMARK 465 CYS A 119 REMARK 465 ALA A 163 REMARK 465 ASN A 164 REMARK 465 THR A 165 REMARK 465 LYS A 166 REMARK 465 ARG A 167 REMARK 465 SER A 168 REMARK 465 LEU A 169 REMARK 465 SER A 170 REMARK 465 ASP A 207 REMARK 465 GLY A 208 REMARK 465 PRO A 209 REMARK 465 ALA A 210 REMARK 465 VAL A 211 REMARK 465 ASP A 212 REMARK 465 VAL A 213 REMARK 465 GLU A 214 REMARK 465 ASN A 215 REMARK 465 GLU A 244 REMARK 465 GLY A 245 REMARK 465 LYS A 246 REMARK 465 ALA A 247 REMARK 465 GLN A 248 REMARK 465 LYS A 249 REMARK 465 SER A 250 REMARK 465 THR A 251 REMARK 465 ILE A 252 REMARK 465 GLU A 253 REMARK 465 LYS A 284 REMARK 465 ALA A 285 REMARK 465 LEU A 286 REMARK 465 PHE A 287 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LYS B 3 REMARK 465 ASP B 4 REMARK 465 ILE B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 GLY B 19 REMARK 465 PHE B 20 REMARK 465 SER B 21 REMARK 465 PHE B 22 REMARK 465 LYS B 23 REMARK 465 LYS B 24 REMARK 465 SER B 25 REMARK 465 LEU B 26 REMARK 465 GLY B 27 REMARK 465 ASP B 33 REMARK 465 GLY B 60 REMARK 465 ASP B 118 REMARK 465 ALA B 163 REMARK 465 ARG B 167 REMARK 465 SER B 168 REMARK 465 LEU B 169 REMARK 465 SER B 170 REMARK 465 ILE B 171 REMARK 465 ALA B 210 REMARK 465 VAL B 211 REMARK 465 ASP B 212 REMARK 465 VAL B 213 REMARK 465 GLU B 214 REMARK 465 ASN B 215 REMARK 465 GLU B 244 REMARK 465 GLY B 245 REMARK 465 LYS B 246 REMARK 465 ALA B 247 REMARK 465 GLN B 248 REMARK 465 GLU B 258 REMARK 465 LYS B 284 REMARK 465 ALA B 285 REMARK 465 LEU B 286 REMARK 465 PHE B 287 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 10 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 LEU A 31 CG CD1 CD2 REMARK 470 ILE A 32 CG1 CG2 CD1 REMARK 470 ASN A 35 CG OD1 ND2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 42 CG OD1 OD2 REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 ILE A 59 CG1 CG2 CD1 REMARK 470 GLN A 65 CG CD OE1 NE2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 LEU A 90 CG CD1 CD2 REMARK 470 SER A 91 OG REMARK 470 TYR A 93 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 GLN A 101 CG CD OE1 NE2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 GLU A 114 CG CD OE1 OE2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 TYR A 130 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 131 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 ARG A 161 CG CD NE CZ NH1 NH2 REMARK 470 MET A 162 CG SD CE REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 GLN A 221 CG CD OE1 NE2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 GLN A 229 CG CD OE1 NE2 REMARK 470 ARG A 230 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 232 CG CD CE NZ REMARK 470 THR A 233 OG1 CG2 REMARK 470 ASN A 240 CG OD1 ND2 REMARK 470 PRO A 243 CG CD REMARK 470 GLU A 257 CG CD OE1 OE2 REMARK 470 GLU A 258 CG CD OE1 OE2 REMARK 470 ASN A 260 CG OD1 ND2 REMARK 470 ASP A 262 CG OD1 OD2 REMARK 470 GLU A 274 CG CD OE1 OE2 REMARK 470 TYR A 283 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 9 CG1 CG2 CD1 REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 ILE B 59 CG1 CG2 CD1 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 ARG B 81 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 87 CG CD CE NZ REMARK 470 LEU B 90 CG CD1 CD2 REMARK 470 SER B 91 OG REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 GLN B 101 CG CD OE1 NE2 REMARK 470 LYS B 105 CG CD CE NZ REMARK 470 LYS B 109 CG CD CE NZ REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 GLU B 121 CG CD OE1 OE2 REMARK 470 ILE B 122 CG1 CG2 CD1 REMARK 470 VAL B 125 CG1 CG2 REMARK 470 TYR B 130 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 131 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 GLN B 155 CG CD OE1 NE2 REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 ARG B 161 CG CD NE CZ NH1 NH2 REMARK 470 MET B 162 CG SD CE REMARK 470 ASN B 164 CG OD1 ND2 REMARK 470 THR B 165 OG1 CG2 REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 VAL B 173 CG1 CG2 REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 218 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 221 CG CD OE1 NE2 REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 GLN B 229 CG CD OE1 NE2 REMARK 470 ARG B 230 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 232 CG CD CE NZ REMARK 470 ASN B 236 CG OD1 ND2 REMARK 470 ASN B 240 CG OD1 ND2 REMARK 470 ASN B 241 CG OD1 ND2 REMARK 470 LYS B 249 CG CD CE NZ REMARK 470 GLU B 253 CG CD OE1 OE2 REMARK 470 GLN B 254 CG CD OE1 NE2 REMARK 470 GLU B 257 CG CD OE1 OE2 REMARK 470 THR B 259 OG1 CG2 REMARK 470 ASN B 260 CG OD1 ND2 REMARK 470 ILE B 261 CG1 CG2 CD1 REMARK 470 ASP B 262 CG OD1 OD2 REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 GLU B 268 CG CD OE1 OE2 REMARK 470 GLU B 273 CG CD OE1 OE2 REMARK 470 GLU B 274 CG CD OE1 OE2 REMARK 470 LEU B 282 CG CD1 CD2 REMARK 470 TYR B 283 C O CG CD1 CD2 CE1 CE2 REMARK 470 TYR B 283 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 32 -70.38 -133.77 REMARK 500 ASN A 35 -52.31 -26.38 REMARK 500 ASN A 95 55.04 -109.49 REMARK 500 LYS A 105 39.82 -99.79 REMARK 500 ASP A 107 69.18 -113.53 REMARK 500 ILE A 122 128.77 69.40 REMARK 500 MET A 183 113.59 64.88 REMARK 500 THR A 188 6.44 -67.69 REMARK 500 GLN A 193 78.76 60.33 REMARK 500 SER A 198 -169.55 -114.56 REMARK 500 PHE A 219 -50.05 -25.69 REMARK 500 ARG A 230 -52.36 72.70 REMARK 500 LEU A 256 98.93 -161.82 REMARK 500 ASN A 280 33.95 -77.45 REMARK 500 LEU A 282 70.92 -159.04 REMARK 500 LYS B 16 68.01 113.92 REMARK 500 ASN B 35 -54.53 -25.63 REMARK 500 THR B 89 -72.58 -59.11 REMARK 500 ASN B 95 53.39 -108.73 REMARK 500 LYS B 105 40.24 -99.42 REMARK 500 PHE B 116 112.48 65.34 REMARK 500 ASP B 120 -75.07 -98.85 REMARK 500 GLU B 121 -105.02 9.46 REMARK 500 ILE B 122 -91.63 158.02 REMARK 500 MET B 123 149.67 69.38 REMARK 500 VAL B 124 55.98 -162.37 REMARK 500 ALA B 126 -162.49 -120.49 REMARK 500 ARG B 161 -18.63 -43.30 REMARK 500 MET B 183 110.54 63.43 REMARK 500 THR B 188 5.70 -67.65 REMARK 500 GLN B 193 79.26 61.99 REMARK 500 SER B 198 -169.36 -115.62 REMARK 500 PHE B 219 -48.73 -29.44 REMARK 500 ARG B 230 -54.02 72.90 REMARK 500 ASN B 241 -112.55 -160.85 REMARK 500 THR B 251 -1.97 -53.87 REMARK 500 ASN B 260 66.50 -151.44 REMARK 500 LYS B 264 48.56 -97.93 REMARK 500 LEU B 282 68.98 -164.77 REMARK 500 REMARK 500 REMARK: NULL DBREF 6IFX A 1 163 UNP P37468 RSMA_BACSU 1 163 DBREF 6IFX A 168 287 UNP P37468 RSMA_BACSU 173 292 DBREF 6IFX B 1 163 UNP P37468 RSMA_BACSU 1 163 DBREF 6IFX B 168 287 UNP P37468 RSMA_BACSU 173 292 SEQADV 6IFX ASN A 164 UNP P37468 LINKER SEQADV 6IFX THR A 165 UNP P37468 LINKER SEQADV 6IFX LYS A 166 UNP P37468 LINKER SEQADV 6IFX ARG A 167 UNP P37468 LINKER SEQADV 6IFX ASN B 164 UNP P37468 LINKER SEQADV 6IFX THR B 165 UNP P37468 LINKER SEQADV 6IFX LYS B 166 UNP P37468 LINKER SEQADV 6IFX ARG B 167 UNP P37468 LINKER SEQRES 1 A 287 MET ASN LYS ASP ILE ALA THR PRO ILE ARG THR LYS GLU SEQRES 2 A 287 ILE LEU LYS LYS TYR GLY PHE SER PHE LYS LYS SER LEU SEQRES 3 A 287 GLY GLN ASN PHE LEU ILE ASP THR ASN ILE LEU ASN ARG SEQRES 4 A 287 ILE VAL ASP HIS ALA GLU VAL THR GLU LYS THR GLY VAL SEQRES 5 A 287 ILE GLU ILE GLY PRO GLY ILE GLY ALA LEU THR GLU GLN SEQRES 6 A 287 LEU ALA LYS ARG ALA LYS LYS VAL VAL ALA PHE GLU ILE SEQRES 7 A 287 ASP GLN ARG LEU LEU PRO ILE LEU LYS ASP THR LEU SER SEQRES 8 A 287 PRO TYR GLU ASN VAL THR VAL ILE HIS GLN ASP VAL LEU SEQRES 9 A 287 LYS ALA ASP VAL LYS SER VAL ILE GLU GLU GLN PHE GLN SEQRES 10 A 287 ASP CYS ASP GLU ILE MET VAL VAL ALA ASN LEU PRO TYR SEQRES 11 A 287 TYR VAL THR THR PRO ILE ILE MET LYS LEU LEU GLU GLU SEQRES 12 A 287 HIS LEU PRO LEU LYS GLY ILE VAL VAL MET LEU GLN LYS SEQRES 13 A 287 GLU VAL ALA GLU ARG MET ALA ASN THR LYS ARG SER LEU SEQRES 14 A 287 SER ILE ALA VAL GLN PHE TYR THR GLU ALA LYS THR VAL SEQRES 15 A 287 MET ILE VAL PRO LYS THR VAL PHE VAL PRO GLN PRO ASN SEQRES 16 A 287 VAL ASP SER ALA VAL ILE ARG LEU ILE LEU ARG ASP GLY SEQRES 17 A 287 PRO ALA VAL ASP VAL GLU ASN GLU SER PHE PHE PHE GLN SEQRES 18 A 287 LEU ILE LYS ALA SER PHE ALA GLN ARG ARG LYS THR LEU SEQRES 19 A 287 LEU ASN ASN LEU VAL ASN ASN LEU PRO GLU GLY LYS ALA SEQRES 20 A 287 GLN LYS SER THR ILE GLU GLN VAL LEU GLU GLU THR ASN SEQRES 21 A 287 ILE ASP GLY LYS ARG ARG GLY GLU SER LEU SER ILE GLU SEQRES 22 A 287 GLU PHE ALA ALA LEU SER ASN GLY LEU TYR LYS ALA LEU SEQRES 23 A 287 PHE SEQRES 1 B 287 MET ASN LYS ASP ILE ALA THR PRO ILE ARG THR LYS GLU SEQRES 2 B 287 ILE LEU LYS LYS TYR GLY PHE SER PHE LYS LYS SER LEU SEQRES 3 B 287 GLY GLN ASN PHE LEU ILE ASP THR ASN ILE LEU ASN ARG SEQRES 4 B 287 ILE VAL ASP HIS ALA GLU VAL THR GLU LYS THR GLY VAL SEQRES 5 B 287 ILE GLU ILE GLY PRO GLY ILE GLY ALA LEU THR GLU GLN SEQRES 6 B 287 LEU ALA LYS ARG ALA LYS LYS VAL VAL ALA PHE GLU ILE SEQRES 7 B 287 ASP GLN ARG LEU LEU PRO ILE LEU LYS ASP THR LEU SER SEQRES 8 B 287 PRO TYR GLU ASN VAL THR VAL ILE HIS GLN ASP VAL LEU SEQRES 9 B 287 LYS ALA ASP VAL LYS SER VAL ILE GLU GLU GLN PHE GLN SEQRES 10 B 287 ASP CYS ASP GLU ILE MET VAL VAL ALA ASN LEU PRO TYR SEQRES 11 B 287 TYR VAL THR THR PRO ILE ILE MET LYS LEU LEU GLU GLU SEQRES 12 B 287 HIS LEU PRO LEU LYS GLY ILE VAL VAL MET LEU GLN LYS SEQRES 13 B 287 GLU VAL ALA GLU ARG MET ALA ASN THR LYS ARG SER LEU SEQRES 14 B 287 SER ILE ALA VAL GLN PHE TYR THR GLU ALA LYS THR VAL SEQRES 15 B 287 MET ILE VAL PRO LYS THR VAL PHE VAL PRO GLN PRO ASN SEQRES 16 B 287 VAL ASP SER ALA VAL ILE ARG LEU ILE LEU ARG ASP GLY SEQRES 17 B 287 PRO ALA VAL ASP VAL GLU ASN GLU SER PHE PHE PHE GLN SEQRES 18 B 287 LEU ILE LYS ALA SER PHE ALA GLN ARG ARG LYS THR LEU SEQRES 19 B 287 LEU ASN ASN LEU VAL ASN ASN LEU PRO GLU GLY LYS ALA SEQRES 20 B 287 GLN LYS SER THR ILE GLU GLN VAL LEU GLU GLU THR ASN SEQRES 21 B 287 ILE ASP GLY LYS ARG ARG GLY GLU SER LEU SER ILE GLU SEQRES 22 B 287 GLU PHE ALA ALA LEU SER ASN GLY LEU TYR LYS ALA LEU SEQRES 23 B 287 PHE FORMUL 3 HOH *2(H2 O) HELIX 1 AA1 ASP A 33 ALA A 44 1 12 HELIX 2 AA2 LEU A 62 LYS A 68 1 7 HELIX 3 AA3 LEU A 82 THR A 89 1 8 HELIX 4 AA4 ASP A 102 ALA A 106 5 5 HELIX 5 AA5 ASP A 107 PHE A 116 1 10 HELIX 6 AA6 PRO A 129 GLU A 143 1 15 HELIX 7 AA7 LYS A 156 ARG A 161 1 6 HELIX 8 AA8 PRO A 186 PHE A 190 5 5 HELIX 9 AA9 PHE A 218 PHE A 227 1 10 HELIX 10 AB1 THR A 233 LEU A 238 1 6 HELIX 11 AB2 GLU A 273 ASN A 280 1 8 HELIX 12 AB3 ILE B 36 ALA B 44 1 9 HELIX 13 AB4 LEU B 62 LYS B 68 1 7 HELIX 14 AB5 LEU B 82 THR B 89 1 8 HELIX 15 AB6 ASP B 102 ALA B 106 5 5 HELIX 16 AB7 ASP B 107 GLN B 115 1 9 HELIX 17 AB8 PRO B 129 GLU B 143 1 15 HELIX 18 AB9 LYS B 156 ARG B 161 1 6 HELIX 19 AC1 PRO B 186 PHE B 190 5 5 HELIX 20 AC2 PHE B 218 PHE B 227 1 10 HELIX 21 AC3 THR B 233 LEU B 238 1 6 HELIX 22 AC4 THR B 251 GLU B 257 1 7 HELIX 23 AC5 SER B 271 GLY B 281 1 11 SHEET 1 AA1 5 GLU A 54 ILE A 55 0 SHEET 2 AA1 5 MET A 123 ASN A 127 1 O ASN A 127 N ILE A 55 SHEET 3 AA1 5 GLY A 149 GLN A 155 1 O VAL A 151 N VAL A 124 SHEET 4 AA1 5 SER A 198 LEU A 205 -1 O ALA A 199 N LEU A 154 SHEET 5 AA1 5 THR A 177 LYS A 180 -1 N LYS A 180 O ARG A 202 SHEET 1 AA2 5 GLU A 54 ILE A 55 0 SHEET 2 AA2 5 MET A 123 ASN A 127 1 O ASN A 127 N ILE A 55 SHEET 3 AA2 5 GLY A 149 GLN A 155 1 O VAL A 151 N VAL A 124 SHEET 4 AA2 5 SER A 198 LEU A 205 -1 O ALA A 199 N LEU A 154 SHEET 5 AA2 5 ILE A 184 VAL A 185 -1 N VAL A 185 O SER A 198 SHEET 1 AA3 2 VAL A 73 PHE A 76 0 SHEET 2 AA3 2 VAL A 96 ILE A 99 1 O THR A 97 N VAL A 73 SHEET 1 AA4 2 VAL B 73 PHE B 76 0 SHEET 2 AA4 2 VAL B 96 ILE B 99 1 O THR B 97 N VAL B 73 SHEET 1 AA5 4 ALA B 126 ASN B 127 0 SHEET 2 AA5 4 VAL B 152 GLN B 155 1 O MET B 153 N ALA B 126 SHEET 3 AA5 4 SER B 198 LEU B 205 -1 O ALA B 199 N LEU B 154 SHEET 4 AA5 4 THR B 177 LYS B 180 -1 N LYS B 180 O ARG B 202 SHEET 1 AA6 4 ALA B 126 ASN B 127 0 SHEET 2 AA6 4 VAL B 152 GLN B 155 1 O MET B 153 N ALA B 126 SHEET 3 AA6 4 SER B 198 LEU B 205 -1 O ALA B 199 N LEU B 154 SHEET 4 AA6 4 ILE B 184 VAL B 185 -1 N VAL B 185 O SER B 198 CRYST1 67.693 79.499 130.115 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014773 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007686 0.00000