HEADER ANTITOXIN 09-OCT-18 6IJF TITLE CRYSTAL STRUCTURE OF THE TYPE VI EFFECTOR-IMMUNITY COMPLEX (TAE4-TAI4) TITLE 2 FROM AGROBACTERIUM TUMEFACIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAI4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TAE4; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_COMMON: RHIZOBIUM RADIOBACTER; SOURCE 4 ORGANISM_TAXID: 358; SOURCE 5 GENE: SY94_4314; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PETDUET-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 13 ORGANISM_COMMON: RHIZOBIUM RADIOBACTER; SOURCE 14 ORGANISM_TAXID: 358; SOURCE 15 GENE: SY94_4315; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: MODIFIED PETDUET-1 KEYWDS COMPLEX, ANTITOXIN EXPDTA X-RAY DIFFRACTION AUTHOR S.FUKUHARA,T.NAKANE,K.YAMASHITA,R.ISHII,R.ISHITANI,O.NUREKI REVDAT 2 22-NOV-23 6IJF 1 REMARK REVDAT 1 19-DEC-18 6IJF 0 JRNL AUTH S.FUKUHARA,T.NAKANE,K.YAMASHITA,R.ISHII,R.ISHITANI,O.NUREKI JRNL TITL CRYSTAL STRUCTURE OF THE AGROBACTERIUM TUMEFACIENS TYPE VI JRNL TITL 2 EFFECTOR-IMMUNITY COMPLEX. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 74 810 2018 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 30511676 JRNL DOI 10.1107/S2053230X18016369 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 42275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2278 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4036 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -3.08000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.149 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.379 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4178 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3748 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5687 ; 1.572 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8705 ; 1.400 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 551 ;20.979 ; 5.426 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;34.819 ;21.643 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 622 ;15.660 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.281 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 548 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5280 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 903 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2108 ; 4.413 ; 4.897 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2107 ; 4.411 ; 4.895 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2630 ; 5.629 ; 7.315 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2631 ; 5.630 ; 7.318 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2070 ; 4.908 ; 5.331 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2070 ; 4.906 ; 5.331 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3054 ; 6.790 ; 7.807 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 17414 ; 9.229 ;92.486 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 17358 ; 9.235 ;92.484 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 99 B 2 99 2984 0.11 0.01 REMARK 3 2 C 1 163 D 1 163 5212 0.09 0.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6IJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44633 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 97.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4BI8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35 % PEG 400, 0.05 M TRIS PH 8.5, 0.05 REMARK 280 M SODIUM SULFATE, 0.05 M LITHIUM SULFATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.78267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.56533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.17400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 161.95667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.39133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ASP A -1 REMARK 465 GLN A 101 REMARK 465 LYS A 102 REMARK 465 SER A 103 REMARK 465 ASN A 104 REMARK 465 GLY B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 ALA B 1 REMARK 465 GLN B 101 REMARK 465 LYS B 102 REMARK 465 SER B 103 REMARK 465 ASN B 104 REMARK 465 MET C 0 REMARK 465 MET D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG D 2 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 148 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 CYS D 148 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 20 55.61 -143.77 REMARK 500 ALA A 21 68.34 -151.35 REMARK 500 SER A 52 -64.82 -101.28 REMARK 500 LEU B 20 55.76 -143.45 REMARK 500 ALA B 21 68.76 -151.60 REMARK 500 CYS B 99 -108.73 -81.28 REMARK 500 TYR C 95 -106.45 -99.71 REMARK 500 ASN C 122 80.60 63.45 REMARK 500 ALA C 147 148.39 -171.83 REMARK 500 TYR D 95 -107.58 -99.77 REMARK 500 ASN D 122 77.10 65.43 REMARK 500 ALA D 147 147.83 -171.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 301 DBREF1 6IJF A 1 104 UNP A0A083ZID3_RHIRD DBREF2 6IJF A A0A083ZID3 26 129 DBREF1 6IJF B 1 104 UNP A0A083ZID3_RHIRD DBREF2 6IJF B A0A083ZID3 26 129 DBREF1 6IJF C 1 163 UNP A0A083ZID4_RHIRD DBREF2 6IJF C A0A083ZID4 1 163 DBREF1 6IJF D 1 163 UNP A0A083ZID4_RHIRD DBREF2 6IJF D A0A083ZID4 1 163 SEQADV 6IJF GLY A -2 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF ASP A -1 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF PRO A 0 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF GLY B -2 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF ASP B -1 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF PRO B 0 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF MET C 0 UNP A0A083ZID EXPRESSION TAG SEQADV 6IJF MET D 0 UNP A0A083ZID EXPRESSION TAG SEQRES 1 A 107 GLY ASP PRO ALA GLU ARG THR TRP ILE PHE SER GLY ALA SEQRES 2 A 107 GLU LEU LYS GLN ALA ILE GLU GLY LYS LEU ALA PRO ASP SEQRES 3 A 107 VAL SER ASP PRO GLU MET ARG ARG LEU VAL SER VAL ALA SEQRES 4 A 107 LYS SER SER ALA TYR ILE ALA GLY VAL ALA ASP LEU THR SEQRES 5 A 107 SER GLY SER ASP TRP CYS GLY ALA GLY ALA VAL ALA PRO SEQRES 6 A 107 HIS GLU LEU THR ASP ARG ILE TYR THR TYR LEU GLY ASP SEQRES 7 A 107 MET PRO ALA GLU LYS LEU ASP GLU GLN ALA ALA THR LEU SEQRES 8 A 107 VAL ARG GLU ALA LEU LYS VAL SER PHE PRO CYS GLU GLN SEQRES 9 A 107 LYS SER ASN SEQRES 1 B 107 GLY ASP PRO ALA GLU ARG THR TRP ILE PHE SER GLY ALA SEQRES 2 B 107 GLU LEU LYS GLN ALA ILE GLU GLY LYS LEU ALA PRO ASP SEQRES 3 B 107 VAL SER ASP PRO GLU MET ARG ARG LEU VAL SER VAL ALA SEQRES 4 B 107 LYS SER SER ALA TYR ILE ALA GLY VAL ALA ASP LEU THR SEQRES 5 B 107 SER GLY SER ASP TRP CYS GLY ALA GLY ALA VAL ALA PRO SEQRES 6 B 107 HIS GLU LEU THR ASP ARG ILE TYR THR TYR LEU GLY ASP SEQRES 7 B 107 MET PRO ALA GLU LYS LEU ASP GLU GLN ALA ALA THR LEU SEQRES 8 B 107 VAL ARG GLU ALA LEU LYS VAL SER PHE PRO CYS GLU GLN SEQRES 9 B 107 LYS SER ASN SEQRES 1 C 164 MET MET ARG VAL ASN PHE ASP THR LEU TYR SER ASN TYR SEQRES 2 C 164 PRO SER SER ASP PRO SER HIS PRO ASN TYR LEU SER GLN SEQRES 3 C 164 ARG ASP LEU PHE THR GLU ILE GLY TRP GLU SER PHE ILE SEQRES 4 C 164 GLY ASN PRO ASN TYR HIS ASN THR CYS ALA ILE ARG VAL SEQRES 5 C 164 SER ILE ALA PHE VAL LYS SER GLY ILE ASN ILE VAL PRO SEQRES 6 C 164 SER SER HIS ARG ILE GLN LYS GLY PRO TYR ALA GLY LYS SEQRES 7 C 164 GLY ILE GLU VAL ASN MET ARG ARG LEU ALA THR LEU MET SEQRES 8 C 164 LYS ARG THR SER TYR LEU GLY GLU PRO ASP PRO TYR THR SEQRES 9 C 164 PRO ALA THR ALA ARG ASN GLY ILE GLY ALA ARG ASN GLY SEQRES 10 C 164 VAL VAL ALA PHE ASN ASN ILE PRO GLY TYR THR GLY GLY SEQRES 11 C 164 GLY HIS ILE ASP LEU VAL ARG GLY GLY SER GLU ALA THR SEQRES 12 C 164 GLN CYS ALA SER ALA CYS TYR TYR ASN SER GLU THR ILE SEQRES 13 C 164 TRP PHE TRP PRO LEU GLN ALA SER SEQRES 1 D 164 MET MET ARG VAL ASN PHE ASP THR LEU TYR SER ASN TYR SEQRES 2 D 164 PRO SER SER ASP PRO SER HIS PRO ASN TYR LEU SER GLN SEQRES 3 D 164 ARG ASP LEU PHE THR GLU ILE GLY TRP GLU SER PHE ILE SEQRES 4 D 164 GLY ASN PRO ASN TYR HIS ASN THR CYS ALA ILE ARG VAL SEQRES 5 D 164 SER ILE ALA PHE VAL LYS SER GLY ILE ASN ILE VAL PRO SEQRES 6 D 164 SER SER HIS ARG ILE GLN LYS GLY PRO TYR ALA GLY LYS SEQRES 7 D 164 GLY ILE GLU VAL ASN MET ARG ARG LEU ALA THR LEU MET SEQRES 8 D 164 LYS ARG THR SER TYR LEU GLY GLU PRO ASP PRO TYR THR SEQRES 9 D 164 PRO ALA THR ALA ARG ASN GLY ILE GLY ALA ARG ASN GLY SEQRES 10 D 164 VAL VAL ALA PHE ASN ASN ILE PRO GLY TYR THR GLY GLY SEQRES 11 D 164 GLY HIS ILE ASP LEU VAL ARG GLY GLY SER GLU ALA THR SEQRES 12 D 164 GLN CYS ALA SER ALA CYS TYR TYR ASN SER GLU THR ILE SEQRES 13 D 164 TRP PHE TRP PRO LEU GLN ALA SER HET 1PE A 201 16 HET SO4 C 301 5 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETSYN 1PE PEG400 FORMUL 5 1PE C10 H22 O6 FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *122(H2 O) HELIX 1 AA1 SER A 8 GLU A 17 1 10 HELIX 2 AA2 ASP A 26 SER A 50 1 25 HELIX 3 AA3 ALA A 61 MET A 76 1 16 HELIX 4 AA4 PRO A 77 GLU A 83 5 7 HELIX 5 AA5 GLN A 84 PHE A 97 1 14 HELIX 6 AA6 SER B 8 GLU B 17 1 10 HELIX 7 AA7 ASP B 26 SER B 50 1 25 HELIX 8 AA8 ALA B 61 MET B 76 1 16 HELIX 9 AA9 PRO B 77 GLU B 83 5 7 HELIX 10 AB1 GLN B 84 PHE B 97 1 14 HELIX 11 AB2 ASN C 4 ASN C 11 1 8 HELIX 12 AB3 SER C 24 GLY C 33 1 10 HELIX 13 AB4 TRP C 34 ILE C 38 5 5 HELIX 14 AB5 ASN C 40 HIS C 44 5 5 HELIX 15 AB6 THR C 46 SER C 58 1 13 HELIX 16 AB7 ASN C 82 ARG C 92 1 11 HELIX 17 AB8 THR C 106 GLY C 112 1 7 HELIX 18 AB9 ASN D 4 ASN D 11 1 8 HELIX 19 AC1 SER D 24 GLY D 33 1 10 HELIX 20 AC2 TRP D 34 ILE D 38 5 5 HELIX 21 AC3 ASN D 40 HIS D 44 5 5 HELIX 22 AC4 THR D 46 SER D 58 1 13 HELIX 23 AC5 ASN D 82 ARG D 92 1 11 HELIX 24 AC6 THR D 106 GLY D 112 1 7 SHEET 1 AA1 2 HIS C 67 ARG C 68 0 SHEET 2 AA1 2 GLY C 78 ILE C 79 -1 O ILE C 79 N HIS C 67 SHEET 1 AA2 5 ASP C 100 TYR C 102 0 SHEET 2 AA2 5 THR C 154 GLN C 161 -1 O ILE C 155 N TYR C 102 SHEET 3 AA2 5 ASN C 115 ASN C 121 -1 N ALA C 119 O TRP C 156 SHEET 4 AA2 5 GLY C 130 ARG C 136 -1 O HIS C 131 N PHE C 120 SHEET 5 AA2 5 GLN C 143 CYS C 144 -1 O GLN C 143 N ARG C 136 SHEET 1 AA3 2 HIS D 67 ARG D 68 0 SHEET 2 AA3 2 GLY D 78 ILE D 79 -1 O ILE D 79 N HIS D 67 SHEET 1 AA4 5 ASP D 100 TYR D 102 0 SHEET 2 AA4 5 THR D 154 GLN D 161 -1 O ILE D 155 N TYR D 102 SHEET 3 AA4 5 ASN D 115 ASN D 121 -1 N ALA D 119 O TRP D 156 SHEET 4 AA4 5 GLY D 130 GLY D 137 -1 O HIS D 131 N PHE D 120 SHEET 5 AA4 5 THR D 142 CYS D 144 -1 O GLN D 143 N ARG D 136 SSBOND 1 CYS A 55 CYS A 99 1555 1555 2.08 SSBOND 2 CYS B 55 CYS B 99 1555 1555 2.07 SSBOND 3 CYS C 144 CYS C 148 1555 1555 2.14 SSBOND 4 CYS D 144 CYS D 148 1555 1555 2.15 CISPEP 1 VAL C 63 PRO C 64 0 -2.21 CISPEP 2 VAL D 63 PRO D 64 0 -1.76 SITE 1 AC1 8 GLU A 17 LYS A 19 GLU B 17 LYS B 19 SITE 2 AC1 8 HOH B 209 SER C 18 PRO D 17 HOH D 223 SITE 1 AC2 7 ARG C 92 THR C 93 SER C 94 HOH C 411 SITE 2 AC2 7 THR D 127 GLY D 128 GLY D 129 CRYST1 72.025 72.025 194.348 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013884 0.008016 0.000000 0.00000 SCALE2 0.000000 0.016032 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005145 0.00000