HEADER SUGAR BINDING PROTEIN 29-OCT-18 6INZ TITLE CRYSTAL STRUCTURE OF SOLUTE-BINDING PROTEIN COMPLEXED WITH UNSATURATED TITLE 2 HYALURONAN DISACCHARIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR SOLUTE-BINDING PROTEIN FAMILY 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PERIPLASMIC SOLUTE-BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOBACILLUS MONILIFORMIS DSM 12112; SOURCE 3 ORGANISM_TAXID: 519441; SOURCE 4 STRAIN: DSM 12112; SOURCE 5 GENE: SMON_0123; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSAMINOGLYCAN, ABC TRANSPORTER, SOLUTE-BINDING PROTEIN, SUGAR KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.OIKI,B.MIKAMI,K.MURATA,W.HASHIMOTO REVDAT 3 22-NOV-23 6INZ 1 HETSYN LINK REVDAT 2 29-JUL-20 6INZ 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 11-SEP-19 6INZ 0 JRNL AUTH S.OIKI,M.SATO,B.MIKAMI,K.MURATA,W.HASHIMOTO JRNL TITL SUBSTRATE RECOGNITION BY BACTERIAL SOLUTE-BINDING PROTEIN IS JRNL TITL 2 RESPONSIBLE FOR IMPORT OF EXTRACELLULAR HYALURONAN AND JRNL TITL 3 CHONDROITIN SULFATE FROM THE ANIMAL HOST. JRNL REF BIOSCI.BIOTECHNOL.BIOCHEM. V. 83 1946 2019 JRNL REFN ISSN 0916-8451 JRNL PMID 31204616 JRNL DOI 10.1080/09168451.2019.1630250 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 29050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1410 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4172 - 4.9286 1.00 2964 140 0.1523 0.1998 REMARK 3 2 4.9286 - 3.9129 1.00 2858 117 0.1230 0.1640 REMARK 3 3 3.9129 - 3.4186 1.00 2788 144 0.1425 0.1852 REMARK 3 4 3.4186 - 3.1061 1.00 2797 120 0.1699 0.2053 REMARK 3 5 3.1061 - 2.8835 1.00 2729 145 0.1920 0.3087 REMARK 3 6 2.8835 - 2.7136 1.00 2738 149 0.1861 0.2414 REMARK 3 7 2.7136 - 2.5777 1.00 2754 144 0.1907 0.2496 REMARK 3 8 2.5777 - 2.4655 1.00 2738 153 0.1894 0.2774 REMARK 3 9 2.4655 - 2.3706 1.00 2728 146 0.1964 0.2729 REMARK 3 10 2.3706 - 2.2888 0.94 2546 152 0.1930 0.2450 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 4048 REMARK 3 ANGLE : 1.645 5491 REMARK 3 CHIRALITY : 0.085 580 REMARK 3 PLANARITY : 0.010 703 REMARK 3 DIHEDRAL : 17.133 2410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6INZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009428. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29129 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.289 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5GUB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM LITIUM SULFATE, 100MM TRIS-HCL REMARK 280 (PH 8.5), 30% PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.37000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.22150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.75050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.22150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.37000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.75050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 LEU A 7 REMARK 465 GLY A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 LEU A 12 REMARK 465 VAL A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 CYS A 17 REMARK 465 GLY A 18 REMARK 465 LYS A 19 REMARK 465 LYS A 20 REMARK 465 GLU A 21 REMARK 465 GLU A 22 REMARK 465 THR A 23 REMARK 465 THR A 24 REMARK 465 THR A 25 REMARK 465 GLY A 26 REMARK 465 LYS A 501 REMARK 465 ASN A 502 REMARK 465 PHE A 503 REMARK 465 ASN A 504 REMARK 465 LYS A 505 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 131 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 MET A 141 CG - SD - CE ANGL. DEV. = -10.0 DEGREES REMARK 500 LYS A 152 CA - CB - CG ANGL. DEV. = 13.3 DEGREES REMARK 500 ARG A 209 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 322 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 354 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 80 42.02 -101.73 REMARK 500 SER A 154 -81.40 -142.84 REMARK 500 ILE A 224 -168.98 -122.29 REMARK 500 ASP A 258 122.31 -38.10 REMARK 500 ASP A 384 30.75 -96.98 REMARK 500 LEU A 401 -101.57 -136.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 611 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 189 OD1 REMARK 620 2 ASN A 191 OD1 90.1 REMARK 620 3 ASN A 193 OD1 84.4 82.9 REMARK 620 4 LYS A 195 O 84.8 164.0 81.5 REMARK 620 5 ASP A 197 OD1 162.5 106.1 91.0 77.8 REMARK 620 6 GLU A 198 OE1 110.9 113.1 157.0 82.8 69.2 REMARK 620 7 GLU A 198 OE2 92.2 68.5 151.2 126.7 99.8 48.9 REMARK 620 N 1 2 3 4 5 6 DBREF 6INZ A 1 505 UNP D1AWE0 D1AWE0_STRM9 1 505 SEQRES 1 A 505 MET LYS LYS LEU LEU ALA LEU GLY LEU LEU GLY LEU VAL SEQRES 2 A 505 LEU ALA SER CYS GLY LYS LYS GLU GLU THR THR THR GLY SEQRES 3 A 505 PRO LYS GLU THR THR ILE PHE ALA MET HIS LEU GLY LYS SEQRES 4 A 505 ALA LEU ASP PRO ASN LEU PRO VAL PHE VAL LYS ALA GLU SEQRES 5 A 505 LYS ASP THR ASN ILE LYS LEU VAL ASN VAL ALA SER GLN SEQRES 6 A 505 ASN GLN THR ASP GLN ILE GLN ALA TYR ASN LEU MET LEU SEQRES 7 A 505 THR GLU GLY LYS LEU PRO ASP ILE VAL SER TYR GLU LEU SEQRES 8 A 505 SER ALA ASP LEU GLU ASN LEU GLY ILE GLU GLY GLY LEU SEQRES 9 A 505 ILE PRO LEU GLU ASP LEU ILE ASN GLN HIS ALA PRO ASN SEQRES 10 A 505 LEU LYS LYS PHE PHE GLU GLU ASN PRO ARG TYR LYS LYS SEQRES 11 A 505 ASP ALA VAL ALA VAL ASP GLY HIS ILE TYR MET ILE PRO SEQRES 12 A 505 ASN TYR TYR ASP TYR PHE ASN ILE LYS VAL SER GLN GLY SEQRES 13 A 505 TYR PHE ILE ARG GLN ASP TRP LEU GLU LYS LEU GLY LEU SEQRES 14 A 505 LYS GLU PRO ARG THR VAL ASP GLU LEU TYR THR THR LEU SEQRES 15 A 505 LYS ALA PHE ARG GLU LYS ASP PRO ASN GLY ASN GLY LYS SEQRES 16 A 505 LYS ASP GLU VAL PRO PHE PHE VAL ARG ALA ASN ASN VAL SEQRES 17 A 505 ARG LYS VAL LEU THR SER LEU VAL ASP LEU PHE LYS ALA SEQRES 18 A 505 SER PRO ILE TRP TYR GLU GLU ASN GLY MET VAL LYS TYR SEQRES 19 A 505 GLY PRO ALA GLN LYS GLU PHE LYS HIS ALA ILE LYS GLU SEQRES 20 A 505 LEU SER LYS TRP TYR LYS GLU GLY LEU ILE ASP GLU GLU SEQRES 21 A 505 ILE PHE THR ARG GLY LEU GLU SER ARG ASP TYR LEU LEU SEQRES 22 A 505 SER ASN ASN LEU GLY GLY ALA THR ASP ASP TRP ILE ALA SEQRES 23 A 505 SER THR SER SER TYR ASN ARG ASN LEU ALA ASP LYS ILE SEQRES 24 A 505 PRO GLY PHE ASN LEU LYS LEU VAL LEU PRO TYR GLU LEU SEQRES 25 A 505 ASN GLY ASN ALA LYS THR ARG HIS ALA ARG THR THR TYR SEQRES 26 A 505 LEU GLY GLY TRP GLY ILE SER LYS ASP ALA LYS ASP PRO SEQRES 27 A 505 VAL SER LEU ILE LYS TYR PHE ASP TYR TRP TYR SER VAL SEQRES 28 A 505 GLU GLY ARG ARG LEU TRP ASN PHE GLY ILE GLU GLY SER SEQRES 29 A 505 GLU TYR THR LEU VAL ASP GLY LYS PRO VAL PHE THR ASP SEQRES 30 A 505 LYS VAL LEU LYS ASN PRO ASP GLY LYS THR PRO LEU ALA SEQRES 31 A 505 VAL LEU ARG GLU VAL GLY ALA GLN TYR ARG LEU GLY ALA SEQRES 32 A 505 PHE GLN ASP ALA GLN TYR GLU LEU GLY TRP ALA SER GLU SEQRES 33 A 505 SER ALA LYS ALA GLY TYR LYS TYR TYR MET ASP ASN ASP SEQRES 34 A 505 VAL VAL LEU ASP GLU LEU PRO ILE LEU LYS TYR THR LYS SEQRES 35 A 505 GLU LYS SER LYS GLU PHE VAL SER ILE ASP THR ALA MET SEQRES 36 A 505 ARG ALA VAL VAL GLU GLU LYS ALA GLN GLN TRP ILE LEU SEQRES 37 A 505 GLY SER GLY ASP ILE ASP LYS GLU TRP ASP ALA TYR ILE SEQRES 38 A 505 LYS ARG LEU GLU ASN LEU GLY LEU SER LYS ALA GLU GLN SEQRES 39 A 505 ILE GLN ASN GLU ALA PHE LYS ASN PHE ASN LYS HET NAG B 1 15 HET GCD B 2 11 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET SO4 A 608 5 HET SO4 A 609 5 HET SO4 A 610 5 HET CA A 611 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GCD 4-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC ACID HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GCD 4,5-DEHYDRO-D-GLUCURONIC ACID; 4-DEOXY-ALPHA-L-THREO- HETSYN 2 GCD HEX-4-ENURONIC ACID; 4-DEOXY-L-THREO-HEX-4-ENURONIC HETSYN 3 GCD ACID; 4-DEOXY-THREO-HEX-4-ENURONIC ACID FORMUL 2 NAG C8 H15 N O6 FORMUL 2 GCD C6 H8 O6 FORMUL 3 SO4 8(O4 S 2-) FORMUL 11 CA CA 2+ FORMUL 12 HOH *272(H2 O) HELIX 1 AA1 LEU A 45 ASN A 56 1 12 HELIX 2 AA2 ASP A 69 LEU A 78 1 10 HELIX 3 AA3 LEU A 91 GLU A 101 1 11 HELIX 4 AA4 LEU A 107 ALA A 115 1 9 HELIX 5 AA5 ALA A 115 ASN A 125 1 11 HELIX 6 AA6 ASN A 125 VAL A 133 1 9 HELIX 7 AA7 GLN A 161 GLY A 168 1 8 HELIX 8 AA8 THR A 174 LYS A 188 1 15 HELIX 9 AA9 ASN A 207 ASP A 217 1 11 HELIX 10 AB1 LEU A 218 LYS A 220 5 3 HELIX 11 AB2 GLN A 238 GLU A 254 1 17 HELIX 12 AB3 GLU A 267 ASN A 275 1 9 HELIX 13 AB4 ILE A 285 SER A 290 1 6 HELIX 14 AB5 SER A 290 ALA A 296 1 7 HELIX 15 AB6 ASP A 337 TRP A 348 1 12 HELIX 16 AB7 SER A 350 GLY A 360 1 11 HELIX 17 AB8 THR A 376 LYS A 381 1 6 HELIX 18 AB9 THR A 387 VAL A 395 1 9 HELIX 19 AC1 ASP A 406 ALA A 414 1 9 HELIX 20 AC2 SER A 415 ASN A 428 1 14 HELIX 21 AC3 THR A 441 GLY A 469 1 29 HELIX 22 AC4 ASP A 472 GLY A 488 1 17 HELIX 23 AC5 GLY A 488 PHE A 500 1 13 SHEET 1 AA1 5 LYS A 58 ASN A 61 0 SHEET 2 AA1 5 GLU A 29 PHE A 33 1 N THR A 30 O LYS A 58 SHEET 3 AA1 5 ILE A 86 TYR A 89 1 O SER A 88 N PHE A 33 SHEET 4 AA1 5 TYR A 325 ILE A 331 -1 O GLY A 330 N VAL A 87 SHEET 5 AA1 5 ILE A 142 TYR A 145 -1 N ASN A 144 O LEU A 326 SHEET 1 AA2 2 MET A 35 HIS A 36 0 SHEET 2 AA2 2 LYS A 39 ALA A 40 -1 O LYS A 39 N HIS A 36 SHEET 1 AA3 3 ALA A 280 TRP A 284 0 SHEET 2 AA3 3 GLN A 155 ARG A 160 -1 N GLY A 156 O ASP A 283 SHEET 3 AA3 3 LEU A 304 VAL A 307 -1 O LYS A 305 N ILE A 159 SHEET 1 AA4 2 TRP A 225 GLU A 228 0 SHEET 2 AA4 2 MET A 231 TYR A 234 -1 O LYS A 233 N TYR A 226 SHEET 1 AA5 2 TYR A 366 VAL A 369 0 SHEET 2 AA5 2 LYS A 372 PHE A 375 -1 O LYS A 372 N VAL A 369 LINK O3 NAG B 1 C1 GCD B 2 1555 1555 1.42 LINK OD1 ASP A 189 CA CA A 611 1555 1555 2.29 LINK OD1 ASN A 191 CA CA A 611 1555 1555 2.26 LINK OD1 ASN A 193 CA CA A 611 1555 1555 2.46 LINK O LYS A 195 CA CA A 611 1555 1555 2.28 LINK OD1 ASP A 197 CA CA A 611 1555 1555 2.37 LINK OE1 GLU A 198 CA CA A 611 1555 1555 2.78 LINK OE2 GLU A 198 CA CA A 611 1555 1555 2.52 CRYST1 48.740 97.501 132.443 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007550 0.00000