HEADER HYDROLASE 01-NOV-18 6IOZ TITLE STRUCTURAL INSIGHTS OF IDURSULFASE BETA COMPND MOL_ID: 1; COMPND 2 MOLECULE: IDURONATE 2-SULFATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-L-IDURONATE SULFATE SULFATASE,IDURSULFASE; COMPND 5 EC: 3.1.6.13; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IDS, SIDS; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS IDURSULFASE BETA, ALPHA-L-IDURONATE SULFATE SULFATASE, IDURONATE 2- KEYWDS 2 SULFATASE 42KDA CHAIN, IDURONATE 2-SULFATASE 14KDA CHAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.KIM,D.KIM,J.HONG,K.LEE,J.SEO,B.H.OH REVDAT 3 22-NOV-23 6IOZ 1 HETSYN LINK REVDAT 2 29-JUL-20 6IOZ 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 28-NOV-18 6IOZ 0 JRNL AUTH H.KIM,D.KIM,J.HONG,K.LEE,J.SEO,B.H.OH JRNL TITL STRUCTURAL INSIGHTS OF IDURSULFASE BETA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.660 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.6 REMARK 3 NUMBER OF REFLECTIONS : 12832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6218 - 5.2992 0.98 2966 158 0.1982 0.2426 REMARK 3 2 5.2992 - 4.2070 0.95 2762 147 0.1681 0.2032 REMARK 3 3 4.2070 - 3.6754 0.88 2561 131 0.1717 0.2360 REMARK 3 4 3.6754 - 3.3395 0.75 2157 116 0.2255 0.2771 REMARK 3 5 3.3395 - 3.1002 0.61 1743 91 0.2931 0.3224 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4362 REMARK 3 ANGLE : 0.787 5971 REMARK 3 CHIRALITY : 0.057 671 REMARK 3 PLANARITY : 0.004 766 REMARK 3 DIHEDRAL : 14.305 2581 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IOZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12919 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.2 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5FQL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M LICL 0.1M MES (PH 6.0) 20% W/V REMARK 280 PEG 6K, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.23233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 190.46467 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 190.46467 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 95.23233 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 372 REMARK 465 ALA A 373 REMARK 465 ALA A 387 REMARK 465 SER A 388 REMARK 465 GLN A 389 REMARK 465 LEU A 390 REMARK 465 PHE A 444 REMARK 465 ARG A 445 REMARK 465 ASP A 446 REMARK 465 LEU A 447 REMARK 465 GLU A 448 REMARK 465 GLU A 449 REMARK 465 ASP A 450 REMARK 465 PRO A 451 REMARK 465 TYR A 452 REMARK 465 LEU A 453 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 108 OD1 ASP A 148 1.57 REMARK 500 HH TYR A 242 OG SER A 305 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 49 44.57 -76.43 REMARK 500 ASP A 104 -135.70 -115.78 REMARK 500 ALA A 113 -63.74 -123.54 REMARK 500 VAL A 136 -74.49 -103.28 REMARK 500 TRP A 267 71.28 39.70 REMARK 500 HIS A 335 175.95 177.60 REMARK 500 ALA A 346 -163.47 72.53 REMARK 500 LYS A 347 -127.83 -101.74 REMARK 500 ASP A 516 66.26 -116.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1000 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 OD1 REMARK 620 2 ASP A 46 OD1 76.6 REMARK 620 3 ALS A 84 OS1 100.4 140.7 REMARK 620 4 ALS A 84 OS3 109.9 80.4 63.5 REMARK 620 5 ASP A 334 OD2 70.2 124.9 88.8 152.0 REMARK 620 N 1 2 3 4 DBREF 6IOZ A 34 550 UNP P22304 IDS_HUMAN 34 550 SEQRES 1 A 517 THR ASP ALA LEU ASN VAL LEU LEU ILE ILE VAL ASP ASP SEQRES 2 A 517 LEU ARG PRO SER LEU GLY CYS TYR GLY ASP LYS LEU VAL SEQRES 3 A 517 ARG SER PRO ASN ILE ASP GLN LEU ALA SER HIS SER LEU SEQRES 4 A 517 LEU PHE GLN ASN ALA PHE ALA GLN GLN ALA VAL ALS ALA SEQRES 5 A 517 PRO SER ARG VAL SER PHE LEU THR GLY ARG ARG PRO ASP SEQRES 6 A 517 THR THR ARG LEU TYR ASP PHE ASN SER TYR TRP ARG VAL SEQRES 7 A 517 HIS ALA GLY ASN PHE SER THR ILE PRO GLN TYR PHE LYS SEQRES 8 A 517 GLU ASN GLY TYR VAL THR MET SER VAL GLY LYS VAL PHE SEQRES 9 A 517 HIS PRO GLY ILE SER SER ASN HIS THR ASP ASP SER PRO SEQRES 10 A 517 TYR SER TRP SER PHE PRO PRO TYR HIS PRO SER SER GLU SEQRES 11 A 517 LYS TYR GLU ASN THR LYS THR CYS ARG GLY PRO ASP GLY SEQRES 12 A 517 GLU LEU HIS ALA ASN LEU LEU CYS PRO VAL ASP VAL LEU SEQRES 13 A 517 ASP VAL PRO GLU GLY THR LEU PRO ASP LYS GLN SER THR SEQRES 14 A 517 GLU GLN ALA ILE GLN LEU LEU GLU LYS MET LYS THR SER SEQRES 15 A 517 ALA SER PRO PHE PHE LEU ALA VAL GLY TYR HIS LYS PRO SEQRES 16 A 517 HIS ILE PRO PHE ARG TYR PRO LYS GLU PHE GLN LYS LEU SEQRES 17 A 517 TYR PRO LEU GLU ASN ILE THR LEU ALA PRO ASP PRO GLU SEQRES 18 A 517 VAL PRO ASP GLY LEU PRO PRO VAL ALA TYR ASN PRO TRP SEQRES 19 A 517 MET ASP ILE ARG GLN ARG GLU ASP VAL GLN ALA LEU ASN SEQRES 20 A 517 ILE SER VAL PRO TYR GLY PRO ILE PRO VAL ASP PHE GLN SEQRES 21 A 517 ARG LYS ILE ARG GLN SER TYR PHE ALA SER VAL SER TYR SEQRES 22 A 517 LEU ASP THR GLN VAL GLY ARG LEU LEU SER ALA LEU ASP SEQRES 23 A 517 ASP LEU GLN LEU ALA ASN SER THR ILE ILE ALA PHE THR SEQRES 24 A 517 SER ASP HIS GLY TRP ALA LEU GLY GLU HIS GLY GLU TRP SEQRES 25 A 517 ALA LYS TYR SER ASN PHE ASP VAL ALA THR HIS VAL PRO SEQRES 26 A 517 LEU ILE PHE TYR VAL PRO GLY ARG THR ALA SER LEU PRO SEQRES 27 A 517 GLU ALA GLY GLU LYS LEU PHE PRO TYR LEU ASP PRO PHE SEQRES 28 A 517 ASP SER ALA SER GLN LEU MET GLU PRO GLY ARG GLN SER SEQRES 29 A 517 MET ASP LEU VAL GLU LEU VAL SER LEU PHE PRO THR LEU SEQRES 30 A 517 ALA GLY LEU ALA GLY LEU GLN VAL PRO PRO ARG CYS PRO SEQRES 31 A 517 VAL PRO SER PHE HIS VAL GLU LEU CYS ARG GLU GLY LYS SEQRES 32 A 517 ASN LEU LEU LYS HIS PHE ARG PHE ARG ASP LEU GLU GLU SEQRES 33 A 517 ASP PRO TYR LEU PRO GLY ASN PRO ARG GLU LEU ILE ALA SEQRES 34 A 517 TYR SER GLN TYR PRO ARG PRO SER ASP ILE PRO GLN TRP SEQRES 35 A 517 ASN SER ASP LYS PRO SER LEU LYS ASP ILE LYS ILE MET SEQRES 36 A 517 GLY TYR SER ILE ARG THR ILE ASP TYR ARG TYR THR VAL SEQRES 37 A 517 TRP VAL GLY PHE ASN PRO ASP GLU PHE LEU ALA ASN PHE SEQRES 38 A 517 SER ASP ILE HIS ALA GLY GLU LEU TYR PHE VAL ASP SER SEQRES 39 A 517 ASP PRO LEU GLN ASP HIS ASN MET TYR ASN ASP SER GLN SEQRES 40 A 517 GLY GLY ASP LEU PHE GLN LEU LEU MET PRO MODRES 6IOZ ALS A 84 CYS MODIFIED RESIDUE HET ALS A 84 11 HET NAG B 1 25 HET NAG B 2 27 HET FUC B 3 20 HET NAG C 1 25 HET NAG C 2 27 HET NAG D 1 26 HET NAG D 2 27 HET NAG E 1 25 HET NAG E 2 27 HET FUC E 3 20 HET NAG F 1 26 HET NAG F 2 27 HET CA A1000 1 HET NAG A1006 27 HET NAG A1007 27 HETNAM ALS (3S)-3-(SULFOOXY)-L-SERINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 1 ALS C3 H7 N O7 S FORMUL 2 NAG 12(C8 H15 N O6) FORMUL 2 FUC 2(C6 H12 O5) FORMUL 7 CA CA 2+ HELIX 1 AA1 LEU A 51 GLY A 55 5 5 HELIX 2 AA2 SER A 61 HIS A 70 1 10 HELIX 3 AA3 VAL A 83 GLY A 94 1 12 HELIX 4 AA4 ARG A 96 ARG A 101 1 6 HELIX 5 AA5 TYR A 108 ALA A 113 1 6 HELIX 6 AA6 THR A 118 ASN A 126 1 9 HELIX 7 AA7 GLY A 140 ASN A 144 5 5 HELIX 8 AA8 PRO A 160 GLU A 166 5 7 HELIX 9 AA9 ASP A 187 THR A 195 5 9 HELIX 10 AB1 LEU A 196 LYS A 213 1 18 HELIX 11 AB2 GLU A 237 TYR A 242 5 6 HELIX 12 AB3 PRO A 243 ILE A 247 5 5 HELIX 13 AB4 PRO A 260 TYR A 264 5 5 HELIX 14 AB5 ASP A 269 GLN A 272 5 4 HELIX 15 AB6 ARG A 273 ALA A 278 1 6 HELIX 16 AB7 PRO A 289 LEU A 321 1 33 HELIX 17 AB8 GLU A 341 GLY A 343 5 3 HELIX 18 AB9 PHE A 351 THR A 355 1 5 HELIX 19 AC1 SER A 405 ALA A 414 1 10 HELIX 20 AC2 LEU A 438 ARG A 443 5 6 HELIX 21 AC3 ASN A 456 ILE A 461 5 6 HELIX 22 AC4 SER A 481 ILE A 485 5 5 HELIX 23 AC5 GLY A 541 MET A 549 1 9 SHEET 1 AA1 7 VAL A 129 GLY A 134 0 SHEET 2 AA1 7 PHE A 219 TYR A 225 1 O GLY A 224 N VAL A 133 SHEET 3 AA1 7 ASN A 38 VAL A 44 1 N ILE A 43 O TYR A 225 SHEET 4 AA1 7 THR A 327 SER A 333 1 O ILE A 328 N ASN A 38 SHEET 5 AA1 7 LEU A 359 TYR A 362 -1 O TYR A 362 N ILE A 329 SHEET 6 AA1 7 LEU A 72 PHE A 74 -1 N PHE A 74 O LEU A 359 SHEET 7 AA1 7 ARG A 395 SER A 397 1 O ARG A 395 N LEU A 73 SHEET 1 AA2 3 HIS A 356 VAL A 357 0 SHEET 2 AA2 3 ALA A 77 PHE A 78 -1 N ALA A 77 O VAL A 357 SHEET 3 AA2 3 VAL A 401 GLU A 402 1 O VAL A 401 N PHE A 78 SHEET 1 AA3 2 CYS A 171 ARG A 172 0 SHEET 2 AA3 2 LEU A 178 HIS A 179 -1 O HIS A 179 N CYS A 171 SHEET 1 AA4 2 LEU A 183 VAL A 186 0 SHEET 2 AA4 2 PHE A 232 PRO A 235 1 O TYR A 234 N VAL A 186 SHEET 1 AA5 2 ALA A 338 LEU A 339 0 SHEET 2 AA5 2 TRP A 345 ALA A 346 -1 O ALA A 346 N ALA A 338 SHEET 1 AA6 4 ALA A 462 ARG A 468 0 SHEET 2 AA6 4 ILE A 487 ARG A 493 -1 O SER A 491 N SER A 464 SHEET 3 AA6 4 TYR A 497 ASN A 506 -1 O TYR A 499 N ILE A 492 SHEET 4 AA6 4 LEU A 511 PHE A 524 -1 O HIS A 518 N TRP A 502 SSBOND 1 CYS A 171 CYS A 184 1555 1555 2.03 SSBOND 2 CYS A 422 CYS A 432 1555 1555 2.03 LINK C VAL A 83 N ALS A 84 1555 1555 1.30 LINK C ALS A 84 N ALA A 85 1555 1555 1.34 LINK ND2 ASN A 115 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 144 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 246 C1 NAG A1006 1555 1555 1.44 LINK ND2 ASN A 280 C1 NAG A1007 1555 1555 1.44 LINK ND2 ASN A 325 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 513 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 537 C1 NAG F 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O6 NAG E 1 C1 FUC E 3 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK OD1 ASP A 45 CA CA A1000 1555 1555 2.39 LINK OD1 ASP A 46 CA CA A1000 1555 1555 2.34 LINK OS1 ALS A 84 CA CA A1000 1555 1555 2.28 LINK OS3 ALS A 84 CA CA A1000 1555 1555 2.44 LINK OD2 ASP A 334 CA CA A1000 1555 1555 2.33 CISPEP 1 SER A 149 PRO A 150 0 -1.53 CISPEP 2 LYS A 227 PRO A 228 0 8.76 CISPEP 3 ILE A 230 PRO A 231 0 -4.35 CISPEP 4 VAL A 283 PRO A 284 0 -1.53 CISPEP 5 GLY A 286 PRO A 287 0 3.26 CISPEP 6 VAL A 424 PRO A 425 0 -3.73 CRYST1 70.825 70.825 285.697 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014119 0.008152 0.000000 0.00000 SCALE2 0.000000 0.016304 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003500 0.00000