HEADER HYDROLASE 14-NOV-18 6IRU TITLE CRYSTAL STRUCTURE OF PEPTIDASE E FROM DEINOCOCCUS RADIODURANS IN P6422 TITLE 2 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE DR_1070; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.4.21.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 5 NCIMB 9279 / R1 / VKM B-1422; SOURCE 6 GENE: DR_1070; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS S51 PEPTIDASE, PEPTIDASE E, DIMER, ACTIVE SITE, ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.YADAV,K.CHANDRAVANSHI,A.KUMAR,R.D.MAKDE REVDAT 2 22-NOV-23 6IRU 1 REMARK REVDAT 1 20-NOV-19 6IRU 0 JRNL AUTH P.YADAV,V.D.GOYAL,K.CHANDRAVANSHI,A.KUMAR,S.M.GOKHALE, JRNL AUTH 2 S.N.JAMDAR,R.D.MAKDE JRNL TITL CATALYTIC TRIAD HETEROGENEITY IN S51 PEPTIDASE FAMILY: JRNL TITL 2 STRUCTURAL BASIS FOR FUNCTIONAL VARIABILITY. JRNL REF PROTEINS V. 87 679 2019 JRNL REFN ESSN 1097-0134 JRNL PMID 30968972 JRNL DOI 10.1002/PROT.25693 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.0263 - 5.3412 1.00 2891 163 0.1947 0.2260 REMARK 3 2 5.3412 - 4.2658 1.00 2775 150 0.1755 0.2185 REMARK 3 3 4.2658 - 3.7344 1.00 2744 134 0.1913 0.2435 REMARK 3 4 3.7344 - 3.3965 1.00 2724 139 0.2368 0.2634 REMARK 3 5 3.3965 - 3.1550 1.00 2698 149 0.2610 0.3211 REMARK 3 6 3.1550 - 2.9703 1.00 2721 121 0.2652 0.3132 REMARK 3 7 2.9703 - 2.8223 1.00 2670 148 0.2736 0.3184 REMARK 3 8 2.8223 - 2.7001 1.00 2673 153 0.2948 0.3386 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4481 REMARK 3 ANGLE : 0.870 6140 REMARK 3 CHIRALITY : 0.055 751 REMARK 3 PLANARITY : 0.007 795 REMARK 3 DIHEDRAL : 3.025 2649 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.4828 -67.2766 11.1551 REMARK 3 T TENSOR REMARK 3 T11: 0.3885 T22: 0.6010 REMARK 3 T33: 0.4079 T12: -0.0733 REMARK 3 T13: -0.0259 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 1.3427 L22: 0.4039 REMARK 3 L33: 0.7784 L12: -0.4380 REMARK 3 L13: 0.1413 L23: -0.1490 REMARK 3 S TENSOR REMARK 3 S11: -0.1605 S12: -0.1169 S13: 0.0444 REMARK 3 S21: 0.0843 S22: 0.0713 S23: 0.1016 REMARK 3 S31: -0.0778 S32: -0.3418 S33: 0.0908 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IRU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : RRCAT INDUS-2 REMARK 200 BEAMLINE : PX-BL21 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23227 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.50 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.90 REMARK 200 R MERGE FOR SHELL (I) : 1.14700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6A4T REMARK 200 REMARK 200 REMARK: HEXAGONAL SHAPE (200-250 MICRON) REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 25 % PEG3350, REMARK 280 MICROBATCH, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.63433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.26867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.63433 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.26867 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.63433 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 67.26867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.63433 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 67.26867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 MET B 0 REMARK 465 ALA B 35 REMARK 465 PRO B 36 REMARK 465 HIS B 204 REMARK 465 HIS B 205 REMARK 465 HIS B 206 REMARK 465 HIS B 207 REMARK 465 MET C 0 REMARK 465 HIS C 203 REMARK 465 HIS C 204 REMARK 465 HIS C 205 REMARK 465 HIS C 206 REMARK 465 HIS C 207 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 34 CG OD1 OD2 REMARK 470 PHE A 37 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 38 CG1 CG2 REMARK 470 GLN A 39 CG CD OE1 NE2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLN A 87 CG CD OE1 NE2 REMARK 470 ARG A 90 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 GLN A 160 CG CD OE1 NE2 REMARK 470 PHE A 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 470 ARG A 196 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 34 CG OD1 OD2 REMARK 470 PHE B 37 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 38 CG1 CG2 REMARK 470 GLN B 39 CG CD OE1 NE2 REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 GLU B 43 CG CD OE1 OE2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 GLU B 51 CG CD OE1 OE2 REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 ARG B 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 GLN B 160 CG CD OE1 NE2 REMARK 470 PHE B 161 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP B 192 CG OD1 OD2 REMARK 470 GLU B 194 CG CD OE1 OE2 REMARK 470 ARG B 196 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 201 CG CD OE1 OE2 REMARK 470 GLN C 15 CG CD OE1 NE2 REMARK 470 LYS C 20 CG CD CE NZ REMARK 470 ARG C 21 CG CD NE CZ NH1 NH2 REMARK 470 ASP C 34 CG OD1 OD2 REMARK 470 LYS C 47 CG CD CE NZ REMARK 470 ASP C 61 CG OD1 OD2 REMARK 470 ARG C 90 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 96 CG CD CE NZ REMARK 470 ARG C 101 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 104 CG CD OE1 NE2 REMARK 470 ASP C 136 CG OD1 OD2 REMARK 470 LYS C 138 CG CD CE NZ REMARK 470 GLN C 160 CG CD OE1 NE2 REMARK 470 ARG C 171 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 196 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 9 179.69 65.29 REMARK 500 TYR A 32 63.76 -153.78 REMARK 500 SER A 112 -106.59 51.40 REMARK 500 GLN B 9 178.52 63.99 REMARK 500 TYR B 32 66.11 -152.62 REMARK 500 SER B 112 -108.66 50.31 REMARK 500 GLN C 9 178.01 63.55 REMARK 500 TYR C 32 68.96 -154.34 REMARK 500 SER C 112 -106.24 50.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6A4T RELATED DB: PDB REMARK 900 THE SAME PROTEIN CLONED IN DIFFERENT EXPRESSION VECTOR AND WAS REMARK 900 SOLVENT IN DIFFERENT SPACE GROUP DBREF 6IRU A 2 199 UNP Q9RVF9 Y1070_DEIRA 2 199 DBREF 6IRU B 2 199 UNP Q9RVF9 Y1070_DEIRA 2 199 DBREF 6IRU C 2 199 UNP Q9RVF9 Y1070_DEIRA 2 199 SEQADV 6IRU MET A 0 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU VAL A 1 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU LEU A 200 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU GLU A 201 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 202 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 203 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 204 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 205 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 206 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS A 207 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU MET B 0 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU VAL B 1 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU LEU B 200 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU GLU B 201 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 202 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 203 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 204 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 205 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 206 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS B 207 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU MET C 0 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU VAL C 1 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU LEU C 200 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU GLU C 201 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 202 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 203 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 204 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 205 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 206 UNP Q9RVF9 EXPRESSION TAG SEQADV 6IRU HIS C 207 UNP Q9RVF9 EXPRESSION TAG SEQRES 1 A 208 MET VAL ARG LEU LEU LEU THR SER PHE GLN HIS PRO SER SEQRES 2 A 208 MET ALA GLN PHE ILE GLY GLY LYS ARG VAL ALA TYR ILE SEQRES 3 A 208 PRO ASP ALA ALA ARG SER TYR ALA ASP ALA PRO PHE VAL SEQRES 4 A 208 GLN LYS GLU ARG GLU GLY LEU GLU LYS GLN GLY LEU GLU SEQRES 5 A 208 LEU ILE ASN LEU PRO LEU SER HIS THR ASP LEU ALA ALA SEQRES 6 A 208 VAL GLU THR THR LEU ASN ALA VAL ASP GLY VAL TYR VAL SEQRES 7 A 208 ALA GLY GLY GLU THR PHE ASP LEU LEU GLN VAL LEU ARG SEQRES 8 A 208 SER THR GLY SER ASP LYS VAL ILE THR ARG ARG VAL ARG SEQRES 9 A 208 GLN GLY LEU PRO TYR ILE GLY CYS SER ALA GLY SER VAL SEQRES 10 A 208 VAL ALA GLY PRO THR ILE GLU ALA VAL SER LEU MET ASP SEQRES 11 A 208 SER PRO ASP ILE ALA PRO ASP LEU LYS ASP TYR THR GLY SEQRES 12 A 208 LEU GLY LEU THR GLU LEU ALA VAL ILE PRO HIS ALA SER SEQRES 13 A 208 GLY SER ILE SER GLN PHE PRO ILE GLU THR ILE ALA ASP SEQRES 14 A 208 THR VAL ARG THR TYR GLY GLU ARG TRP PRO LEU CYS LEU SEQRES 15 A 208 LEU ARG ASP GLY GLN ALA LEU TRP ILE GLU ASP GLY GLU SEQRES 16 A 208 VAL ARG LEU LEU ASN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 208 MET VAL ARG LEU LEU LEU THR SER PHE GLN HIS PRO SER SEQRES 2 B 208 MET ALA GLN PHE ILE GLY GLY LYS ARG VAL ALA TYR ILE SEQRES 3 B 208 PRO ASP ALA ALA ARG SER TYR ALA ASP ALA PRO PHE VAL SEQRES 4 B 208 GLN LYS GLU ARG GLU GLY LEU GLU LYS GLN GLY LEU GLU SEQRES 5 B 208 LEU ILE ASN LEU PRO LEU SER HIS THR ASP LEU ALA ALA SEQRES 6 B 208 VAL GLU THR THR LEU ASN ALA VAL ASP GLY VAL TYR VAL SEQRES 7 B 208 ALA GLY GLY GLU THR PHE ASP LEU LEU GLN VAL LEU ARG SEQRES 8 B 208 SER THR GLY SER ASP LYS VAL ILE THR ARG ARG VAL ARG SEQRES 9 B 208 GLN GLY LEU PRO TYR ILE GLY CYS SER ALA GLY SER VAL SEQRES 10 B 208 VAL ALA GLY PRO THR ILE GLU ALA VAL SER LEU MET ASP SEQRES 11 B 208 SER PRO ASP ILE ALA PRO ASP LEU LYS ASP TYR THR GLY SEQRES 12 B 208 LEU GLY LEU THR GLU LEU ALA VAL ILE PRO HIS ALA SER SEQRES 13 B 208 GLY SER ILE SER GLN PHE PRO ILE GLU THR ILE ALA ASP SEQRES 14 B 208 THR VAL ARG THR TYR GLY GLU ARG TRP PRO LEU CYS LEU SEQRES 15 B 208 LEU ARG ASP GLY GLN ALA LEU TRP ILE GLU ASP GLY GLU SEQRES 16 B 208 VAL ARG LEU LEU ASN LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 208 MET VAL ARG LEU LEU LEU THR SER PHE GLN HIS PRO SER SEQRES 2 C 208 MET ALA GLN PHE ILE GLY GLY LYS ARG VAL ALA TYR ILE SEQRES 3 C 208 PRO ASP ALA ALA ARG SER TYR ALA ASP ALA PRO PHE VAL SEQRES 4 C 208 GLN LYS GLU ARG GLU GLY LEU GLU LYS GLN GLY LEU GLU SEQRES 5 C 208 LEU ILE ASN LEU PRO LEU SER HIS THR ASP LEU ALA ALA SEQRES 6 C 208 VAL GLU THR THR LEU ASN ALA VAL ASP GLY VAL TYR VAL SEQRES 7 C 208 ALA GLY GLY GLU THR PHE ASP LEU LEU GLN VAL LEU ARG SEQRES 8 C 208 SER THR GLY SER ASP LYS VAL ILE THR ARG ARG VAL ARG SEQRES 9 C 208 GLN GLY LEU PRO TYR ILE GLY CYS SER ALA GLY SER VAL SEQRES 10 C 208 VAL ALA GLY PRO THR ILE GLU ALA VAL SER LEU MET ASP SEQRES 11 C 208 SER PRO ASP ILE ALA PRO ASP LEU LYS ASP TYR THR GLY SEQRES 12 C 208 LEU GLY LEU THR GLU LEU ALA VAL ILE PRO HIS ALA SER SEQRES 13 C 208 GLY SER ILE SER GLN PHE PRO ILE GLU THR ILE ALA ASP SEQRES 14 C 208 THR VAL ARG THR TYR GLY GLU ARG TRP PRO LEU CYS LEU SEQRES 15 C 208 LEU ARG ASP GLY GLN ALA LEU TRP ILE GLU ASP GLY GLU SEQRES 16 C 208 VAL ARG LEU LEU ASN LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 4 HOH *8(H2 O) HELIX 1 AA1 SER A 12 GLY A 18 1 7 HELIX 2 AA2 PRO A 26 ALA A 33 5 8 HELIX 3 AA3 GLN A 39 GLN A 48 1 10 HELIX 4 AA4 PRO A 56 THR A 60 5 5 HELIX 5 AA5 ASP A 61 ASN A 70 1 10 HELIX 6 AA6 GLU A 81 GLY A 93 1 13 HELIX 7 AA7 GLY A 93 GLN A 104 1 12 HELIX 8 AA8 SER A 112 VAL A 117 1 6 HELIX 9 AA9 ILE A 122 SER A 126 5 5 HELIX 10 AB1 SER A 130 ALA A 134 5 5 HELIX 11 AB2 PRO A 162 GLY A 174 1 13 HELIX 12 AB3 SER B 12 GLY B 18 1 7 HELIX 13 AB4 PRO B 26 ALA B 33 5 8 HELIX 14 AB5 GLN B 39 GLN B 48 1 10 HELIX 15 AB6 PRO B 56 THR B 60 5 5 HELIX 16 AB7 ASP B 61 ASN B 70 1 10 HELIX 17 AB8 GLU B 81 GLY B 93 1 13 HELIX 18 AB9 GLY B 93 GLN B 104 1 12 HELIX 19 AC1 SER B 112 VAL B 117 1 6 HELIX 20 AC2 ILE B 122 SER B 126 5 5 HELIX 21 AC3 SER B 130 ALA B 134 5 5 HELIX 22 AC4 PRO B 162 GLY B 174 1 13 HELIX 23 AC5 SER C 12 GLY C 18 1 7 HELIX 24 AC6 PRO C 26 ALA C 33 5 8 HELIX 25 AC7 ALA C 35 GLN C 48 1 14 HELIX 26 AC8 PRO C 56 THR C 60 5 5 HELIX 27 AC9 ASP C 61 ASN C 70 1 10 HELIX 28 AD1 GLU C 81 GLY C 93 1 13 HELIX 29 AD2 GLY C 93 GLN C 104 1 12 HELIX 30 AD3 SER C 112 VAL C 117 1 6 HELIX 31 AD4 ILE C 122 SER C 126 5 5 HELIX 32 AD5 SER C 130 ALA C 134 5 5 HELIX 33 AD6 PRO C 162 GLY C 174 1 13 SHEET 1 AA1 7 GLU A 51 ASN A 54 0 SHEET 2 AA1 7 ARG A 21 ILE A 25 1 N VAL A 22 O ILE A 53 SHEET 3 AA1 7 GLY A 74 VAL A 77 1 O TYR A 76 N ILE A 25 SHEET 4 AA1 7 TYR A 108 CYS A 111 1 O ILE A 109 N VAL A 75 SHEET 5 AA1 7 ARG A 2 THR A 6 1 N THR A 6 O GLY A 110 SHEET 6 AA1 7 ALA A 187 GLU A 191 -1 O LEU A 188 N LEU A 5 SHEET 7 AA1 7 GLU A 194 LEU A 198 -1 O LEU A 198 N ALA A 187 SHEET 1 AA2 2 ALA A 149 ILE A 151 0 SHEET 2 AA2 2 LEU A 179 LEU A 181 1 O CYS A 180 N ILE A 151 SHEET 1 AA3 7 GLU B 51 ASN B 54 0 SHEET 2 AA3 7 ARG B 21 ILE B 25 1 N TYR B 24 O ILE B 53 SHEET 3 AA3 7 GLY B 74 VAL B 77 1 O TYR B 76 N ILE B 25 SHEET 4 AA3 7 TYR B 108 CYS B 111 1 O ILE B 109 N VAL B 75 SHEET 5 AA3 7 ARG B 2 THR B 6 1 N THR B 6 O GLY B 110 SHEET 6 AA3 7 ALA B 187 GLU B 191 -1 O LEU B 188 N LEU B 5 SHEET 7 AA3 7 GLU B 194 LEU B 198 -1 O LEU B 198 N ALA B 187 SHEET 1 AA4 2 ALA B 149 ILE B 151 0 SHEET 2 AA4 2 LEU B 179 LEU B 181 1 O CYS B 180 N ILE B 151 SHEET 1 AA5 7 GLU C 51 ASN C 54 0 SHEET 2 AA5 7 ARG C 21 ILE C 25 1 N VAL C 22 O ILE C 53 SHEET 3 AA5 7 GLY C 74 VAL C 77 1 O TYR C 76 N ILE C 25 SHEET 4 AA5 7 TYR C 108 CYS C 111 1 O ILE C 109 N VAL C 75 SHEET 5 AA5 7 ARG C 2 THR C 6 1 N THR C 6 O GLY C 110 SHEET 6 AA5 7 ALA C 187 GLU C 191 -1 O ILE C 190 N LEU C 3 SHEET 7 AA5 7 GLU C 194 LEU C 198 -1 O LEU C 198 N ALA C 187 SHEET 1 AA6 2 ALA C 149 ILE C 151 0 SHEET 2 AA6 2 LEU C 179 LEU C 181 1 O CYS C 180 N ILE C 151 CRYST1 166.745 166.745 100.903 90.00 90.00 120.00 P 64 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005997 0.003462 0.000000 0.00000 SCALE2 0.000000 0.006925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009911 0.00000