HEADER DNA BINDING PROTEIN/DNA 15-NOV-18 6IS8 TITLE CRYSTAL STRUCTURE OF ZMMOC1 D115N MUTANT IN COMPLEX WITH HOLLIDAY TITLE 2 JUNCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOKARYOTIC CHLOROPLAST 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RUVC DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (33-MER); COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (33-MER); COMPND 13 CHAIN: D; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_COMMON: MAIZE; SOURCE 4 ORGANISM_TAXID: 4577; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630 KEYWDS HOLLIDAY JUNCTION RESOLVASE-DNA COMPLEX, DNA BINDING PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.LIN,H.LIN,D.ZHANG,C.YUAN REVDAT 4 22-NOV-23 6IS8 1 LINK REVDAT 3 04-DEC-19 6IS8 1 JRNL REVDAT 2 30-OCT-19 6IS8 1 JRNL REVDAT 1 23-OCT-19 6IS8 0 JRNL AUTH H.LIN,D.ZHANG,K.ZUO,C.YUAN,J.LI,M.HUANG,Z.LIN JRNL TITL STRUCTURAL BASIS OF SEQUENCE-SPECIFIC HOLLIDAY JUNCTION JRNL TITL 2 CLEAVAGE BY MOC1. JRNL REF NAT.CHEM.BIOL. V. 15 1241 2019 JRNL REFN ESSN 1552-4469 JRNL PMID 31611704 JRNL DOI 10.1038/S41589-019-0377-4 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 56212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0204 - 4.5602 0.99 2852 148 0.1646 0.1848 REMARK 3 2 4.5602 - 3.6199 0.99 2824 147 0.1386 0.1663 REMARK 3 3 3.6199 - 3.1625 1.00 2811 143 0.1521 0.2381 REMARK 3 4 3.1625 - 2.8733 1.00 2789 156 0.1651 0.1820 REMARK 3 5 2.8733 - 2.6674 0.99 2820 136 0.1711 0.2208 REMARK 3 6 2.6674 - 2.5102 1.00 2786 154 0.1510 0.2009 REMARK 3 7 2.5102 - 2.3844 1.00 2835 125 0.1463 0.1830 REMARK 3 8 2.3844 - 2.2807 1.00 2806 145 0.1439 0.1925 REMARK 3 9 2.2807 - 2.1929 1.00 2813 129 0.1464 0.2002 REMARK 3 10 2.1929 - 2.1172 0.99 2776 142 0.1484 0.1774 REMARK 3 11 2.1172 - 2.0510 1.00 2752 154 0.1517 0.2012 REMARK 3 12 2.0510 - 1.9924 1.00 2799 144 0.1503 0.2139 REMARK 3 13 1.9924 - 1.9399 1.00 2802 150 0.1472 0.1942 REMARK 3 14 1.9399 - 1.8926 1.00 2767 135 0.1548 0.2215 REMARK 3 15 1.8926 - 1.8495 1.00 2806 137 0.1648 0.2358 REMARK 3 16 1.8495 - 1.8102 0.98 2743 140 0.1762 0.2472 REMARK 3 17 1.8102 - 1.7740 0.93 2609 126 0.1844 0.2349 REMARK 3 18 1.7740 - 1.7405 0.87 2430 139 0.1994 0.2666 REMARK 3 19 1.7405 - 1.7094 0.73 2053 113 0.2067 0.2879 REMARK 3 20 1.7094 - 1.6804 0.58 1583 93 0.2255 0.3190 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4141 REMARK 3 ANGLE : 0.796 5902 REMARK 3 CHIRALITY : 0.052 654 REMARK 3 PLANARITY : 0.006 528 REMARK 3 DIHEDRAL : 15.867 2762 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009731. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58742 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6IS9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 7.5, 37.5% PEG 400, REMARK 280 EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.95350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 98 REMARK 465 PRO A 99 REMARK 465 LEU A 100 REMARK 465 GLY A 101 REMARK 465 SER A 102 REMARK 465 PRO A 103 REMARK 465 GLU A 104 REMARK 465 PHE A 105 REMARK 465 GLY A 106 REMARK 465 ARG A 107 REMARK 465 PRO A 108 REMARK 465 GLY B 98 REMARK 465 PRO B 99 REMARK 465 LEU B 100 REMARK 465 GLY B 101 REMARK 465 SER B 102 REMARK 465 PRO B 103 REMARK 465 GLU B 104 REMARK 465 PHE B 105 REMARK 465 GLY B 106 REMARK 465 ARG B 107 REMARK 465 PRO B 108 REMARK 465 DT D 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 LYS B 248 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O5' DA C 32 O HOH C 101 1.91 REMARK 500 O HOH A 1148 O HOH A 1278 2.07 REMARK 500 O HOH A 1118 O HOH A 1278 2.11 REMARK 500 O HOH A 1127 O HOH A 1191 2.11 REMARK 500 O HOH B 1239 O HOH B 1242 2.11 REMARK 500 P DA C 32 O HOH C 101 2.13 REMARK 500 OP1 DG C 12 O HOH C 102 2.13 REMARK 500 O HOH A 1231 O HOH A 1278 2.13 REMARK 500 O HOH B 1235 O HOH B 1239 2.13 REMARK 500 O GLY A 109 O HOH A 1101 2.14 REMARK 500 O HOH B 1107 O HOH B 1130 2.15 REMARK 500 O HOH A 1258 O HOH B 1205 2.15 REMARK 500 O HOH A 1270 O HOH A 1274 2.16 REMARK 500 O SER A 176 O HOH A 1102 2.16 REMARK 500 O HOH A 1184 O HOH A 1186 2.17 REMARK 500 O HOH A 1141 O HOH C 132 2.17 REMARK 500 O HOH A 1104 O HOH A 1191 2.17 REMARK 500 O HOH B 1221 O HOH B 1235 2.18 REMARK 500 OP2 DA C 32 O HOH C 101 2.19 REMARK 500 O SER B 176 O HOH B 1101 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC C 29 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG C 31 O4' - C4' - C3' ANGL. DEV. = -3.1 DEGREES REMARK 500 DG C 31 C4' - C3' - O3' ANGL. DEV. = 13.3 DEGREES REMARK 500 DT D 26 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 177 71.55 -153.53 REMARK 500 SER A 177 73.84 -154.39 REMARK 500 SER B 177 81.47 -152.29 REMARK 500 SER B 177 62.52 -151.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 115 OD1 REMARK 620 2 ASP A 117 OD2 87.6 REMARK 620 3 HOH A1112 O 100.4 85.7 REMARK 620 4 HOH A1127 O 87.3 87.2 169.3 REMARK 620 5 HOH A1194 O 90.9 165.5 108.8 78.3 REMARK 620 6 DT D 26 OP1 175.6 96.0 77.4 95.4 86.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 115 OD1 REMARK 620 2 ASP B 117 OD1 89.4 REMARK 620 3 HOH B1102 O 93.2 109.4 REMARK 620 4 HOH B1134 O 86.9 170.8 79.3 REMARK 620 5 HOH B1141 O 88.8 84.7 165.8 86.8 REMARK 620 6 DC C 26 OP1 162.1 98.6 99.1 82.7 76.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE B 1002 DBREF 6IS8 A 109 271 UNP B4FCI7 B4FCI7_MAIZE 109 271 DBREF 6IS8 B 109 271 UNP B4FCI7 B4FCI7_MAIZE 109 271 DBREF 6IS8 C 1 33 PDB 6IS8 6IS8 1 33 DBREF 6IS8 D 1 33 PDB 6IS8 6IS8 1 33 SEQADV 6IS8 GLY A 98 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO A 99 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 LEU A 100 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLY A 101 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 SER A 102 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO A 103 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLU A 104 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PHE A 105 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLY A 106 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 ARG A 107 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO A 108 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 ASN A 115 UNP B4FCI7 ASP 115 ENGINEERED MUTATION SEQADV 6IS8 GLY B 98 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO B 99 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 LEU B 100 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLY B 101 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 SER B 102 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO B 103 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLU B 104 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PHE B 105 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 GLY B 106 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 ARG B 107 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 PRO B 108 UNP B4FCI7 EXPRESSION TAG SEQADV 6IS8 ASN B 115 UNP B4FCI7 ASP 115 ENGINEERED MUTATION SEQRES 1 A 174 GLY PRO LEU GLY SER PRO GLU PHE GLY ARG PRO GLY TRP SEQRES 2 A 174 VAL ILE GLY VAL ASN PRO ASP ILE GLY GLY ALA ILE ALA SEQRES 3 A 174 VAL LEU SER PRO ASP GLY SER SER GLN VAL PHE ASP ASN SEQRES 4 A 174 PRO PHE VAL HIS ILE VAL VAL SER GLU VAL ILE ARG LYS SEQRES 5 A 174 ARG LEU ASP THR LYS SER ILE ILE GLN LEU LEU ARG GLY SEQRES 6 A 174 LEU ASP ALA PRO PRO GLY THR THR ALA TYR ILE GLU LYS SEQRES 7 A 174 SER SER PRO PHE PRO THR ASP GLY LYS GLN GLY TRP TRP SEQRES 8 A 174 SER THR GLY PHE SER TYR GLY LEU TRP ILE ALA SER LEU SEQRES 9 A 174 VAL ALA SER GLY PHE SER VAL VAL PRO ILE ALA SER GLN SEQRES 10 A 174 THR TRP LYS ALA TYR PHE GLY LEU MET ARG SER GLU THR SEQRES 11 A 174 PRO LYS ASP ASP SER ARG GLN ALA ALA SER ILE LEU PHE SEQRES 12 A 174 PRO ASP LYS ASP GLN SER LEU LYS LEU LYS LYS HIS HIS SEQRES 13 A 174 GLY ARG ALA GLU ALA LEU LEU LEU ALA ALA TYR GLY LYS SEQRES 14 A 174 GLY LEU VAL LEU PRO SEQRES 1 B 174 GLY PRO LEU GLY SER PRO GLU PHE GLY ARG PRO GLY TRP SEQRES 2 B 174 VAL ILE GLY VAL ASN PRO ASP ILE GLY GLY ALA ILE ALA SEQRES 3 B 174 VAL LEU SER PRO ASP GLY SER SER GLN VAL PHE ASP ASN SEQRES 4 B 174 PRO PHE VAL HIS ILE VAL VAL SER GLU VAL ILE ARG LYS SEQRES 5 B 174 ARG LEU ASP THR LYS SER ILE ILE GLN LEU LEU ARG GLY SEQRES 6 B 174 LEU ASP ALA PRO PRO GLY THR THR ALA TYR ILE GLU LYS SEQRES 7 B 174 SER SER PRO PHE PRO THR ASP GLY LYS GLN GLY TRP TRP SEQRES 8 B 174 SER THR GLY PHE SER TYR GLY LEU TRP ILE ALA SER LEU SEQRES 9 B 174 VAL ALA SER GLY PHE SER VAL VAL PRO ILE ALA SER GLN SEQRES 10 B 174 THR TRP LYS ALA TYR PHE GLY LEU MET ARG SER GLU THR SEQRES 11 B 174 PRO LYS ASP ASP SER ARG GLN ALA ALA SER ILE LEU PHE SEQRES 12 B 174 PRO ASP LYS ASP GLN SER LEU LYS LEU LYS LYS HIS HIS SEQRES 13 B 174 GLY ARG ALA GLU ALA LEU LEU LEU ALA ALA TYR GLY LYS SEQRES 14 B 174 GLY LEU VAL LEU PRO SEQRES 1 C 33 DC DA DA DT DC DG DT DA DG DG DA DG DA SEQRES 2 C 33 DC DC DT DT DT DG DG DT DC DT DC DC DC SEQRES 3 C 33 DT DG DC DA DG DA DT SEQRES 1 D 33 DA DT DC DT DG DC DA DG DG DG DT DC DT SEQRES 2 D 33 DG DG DT DT DT DC DC DA DG DA DC DC DT SEQRES 3 D 33 DA DC DG DA DT DT DG HET MG A1001 1 HET 1PE A1002 16 HET MG B1001 1 HET 1PE B1002 16 HETNAM MG MAGNESIUM ION HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 5 MG 2(MG 2+) FORMUL 6 1PE 2(C10 H22 O6) FORMUL 9 HOH *478(H2 O) HELIX 1 AA1 ASP A 152 LEU A 163 1 12 HELIX 2 AA2 GLY A 183 SER A 204 1 22 HELIX 3 AA3 ALA A 212 PHE A 220 1 9 HELIX 4 AA4 THR A 227 PHE A 240 1 14 HELIX 5 AA5 PRO A 241 LYS A 248 5 8 HELIX 6 AA6 LEU A 249 LYS A 251 5 3 HELIX 7 AA7 HIS A 252 GLY A 267 1 16 HELIX 8 AA8 ASP B 152 LEU B 163 1 12 HELIX 9 AA9 GLY B 183 SER B 204 1 22 HELIX 10 AB1 ALA B 212 PHE B 220 1 9 HELIX 11 AB2 THR B 227 PHE B 240 1 14 HELIX 12 AB3 PRO B 241 LYS B 248 5 8 HELIX 13 AB4 LEU B 249 LYS B 251 5 3 HELIX 14 AB5 HIS B 252 GLY B 267 1 16 SHEET 1 AA1 5 SER A 131 ASP A 135 0 SHEET 2 AA1 5 ALA A 121 LEU A 125 -1 N VAL A 124 O GLN A 132 SHEET 3 AA1 5 VAL A 111 ASN A 115 -1 N VAL A 111 O LEU A 125 SHEET 4 AA1 5 THR A 170 GLU A 174 1 O TYR A 172 N ILE A 112 SHEET 5 AA1 5 SER A 207 ILE A 211 1 O SER A 207 N ALA A 171 SHEET 1 AA2 2 PHE A 138 VAL A 143 0 SHEET 2 AA2 2 VAL A 146 LEU A 151 -1 O ARG A 148 N ILE A 141 SHEET 1 AA3 5 SER B 131 ASP B 135 0 SHEET 2 AA3 5 ALA B 121 LEU B 125 -1 N VAL B 124 O GLN B 132 SHEET 3 AA3 5 VAL B 111 ASN B 115 -1 N VAL B 111 O LEU B 125 SHEET 4 AA3 5 THR B 170 GLU B 174 1 O TYR B 172 N VAL B 114 SHEET 5 AA3 5 SER B 207 ILE B 211 1 O SER B 207 N ALA B 171 SHEET 1 AA4 2 PHE B 138 VAL B 143 0 SHEET 2 AA4 2 VAL B 146 LEU B 151 -1 O ARG B 148 N ILE B 141 LINK OD1 ASN A 115 MG MG A1001 1555 1555 2.13 LINK OD2BASP A 117 MG MG A1001 1555 1555 2.00 LINK MG MG A1001 O HOH A1112 1555 1555 2.30 LINK MG MG A1001 O HOH A1127 1555 1555 2.01 LINK MG MG A1001 O HOH A1194 1555 1555 2.47 LINK MG MG A1001 OP1 DT D 26 1555 1555 2.31 LINK OD1 ASN B 115 MG MG B1001 1555 1555 2.00 LINK OD1AASP B 117 MG MG B1001 1555 1555 1.86 LINK MG MG B1001 O HOH B1102 1555 1555 1.99 LINK MG MG B1001 O HOH B1134 1555 1555 2.36 LINK MG MG B1001 O HOH B1141 1555 1555 2.43 LINK MG MG B1001 OP1 DC C 26 1555 1555 2.37 SITE 1 AC1 6 ASN A 115 ASP A 117 HOH A1112 HOH A1127 SITE 2 AC1 6 HOH A1194 DT D 26 SITE 1 AC2 6 VAL A 143 ARG A 150 TRP A 188 HOH A1103 SITE 2 AC2 6 TRP B 187 ILE B 198 SITE 1 AC3 6 ASN B 115 ASP B 117 HOH B1102 HOH B1134 SITE 2 AC3 6 HOH B1141 DC C 26 SITE 1 AC4 6 ILE B 141 VAL B 143 ARG B 150 TRP B 188 SITE 2 AC4 6 HOH B1104 DT D 11 CRYST1 53.699 77.907 63.577 90.00 97.55 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018622 0.000000 0.002467 0.00000 SCALE2 0.000000 0.012836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015866 0.00000