data_6ITD # _entry.id 6ITD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ITD pdb_00006itd 10.2210/pdb6itd/pdb WWPDB D_1300009853 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ITD _pdbx_database_status.recvd_initial_deposition_date 2018-11-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sakaki, K.' 1 ? 'Tomita, T.' 2 ? 'Kuzuyama, T.' 3 ? 'Nishiyama, M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 415 _citation.page_last 422 _citation.title 'A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-019-0461-9 _citation.pdbx_database_id_PubMed 32042199 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sakaki, K.' 1 ? primary 'Ohishi, K.' 2 ? primary 'Shimizu, T.' 3 ? primary 'Kobayashi, I.' 4 ? primary 'Mori, N.' 5 ? primary 'Matsuda, K.' 6 ? primary 'Tomita, T.' 7 ? primary 'Watanabe, H.' 8 ? primary 'Tanaka, K.' 9 ? primary 'Kuzuyama, T.' 10 ? primary 'Nishiyama, M.' 11 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6ITD _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.167 _cell.length_a_esd ? _cell.length_b 71.167 _cell.length_b_esd ? _cell.length_c 98.211 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ITD _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Slr0355 protein' 37794.789 1 ? K124A ? ? 2 non-polymer syn '3-(1-AMINOETHYL)NONANEDIOIC ACID' 231.289 1 ? ? ? ? 3 water nat water 18.015 49 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BioU # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKHHHHHHHHGGLVPRGSHGGSMENNSLAPLRVGILGFGGLGQAAARLLAPKQEMKLVAVADRHGYLYDADGIDVDNAVQ AYTQQGSVGKAKKGQMSEQSIEDLIGEGEVDGYFLALPNLPNTFMADVTRQFIASGWQGVLVDALARTSAVEQLITLRED LAQAGITYMTGCGATPGLLTAAAAIASQSFQEIHQVKITFGVGIANWEAYRATIREDIAHMPGYNVDKAQAMTDAEVAAL LDQTNGILALEDMEHADDIMLELAGICHRDQVTVGGVVDTRNPKKPLSTHVKITGRTFEGKISSHTFTLGDETSMAANVC GPAFGYLKAGYGLHRQGLKGLFTAADVMPKFVR ; _entity_poly.pdbx_seq_one_letter_code_can ;MKHHHHHHHHGGLVPRGSHGGSMENNSLAPLRVGILGFGGLGQAAARLLAPKQEMKLVAVADRHGYLYDADGIDVDNAVQ AYTQQGSVGKAKKGQMSEQSIEDLIGEGEVDGYFLALPNLPNTFMADVTRQFIASGWQGVLVDALARTSAVEQLITLRED LAQAGITYMTGCGATPGLLTAAAAIASQSFQEIHQVKITFGVGIANWEAYRATIREDIAHMPGYNVDKAQAMTDAEVAAL LDQTNGILALEDMEHADDIMLELAGICHRDQVTVGGVVDTRNPKKPLSTHVKITGRTFEGKISSHTFTLGDETSMAANVC GPAFGYLKAGYGLHRQGLKGLFTAADVMPKFVR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 GLY n 1 13 LEU n 1 14 VAL n 1 15 PRO n 1 16 ARG n 1 17 GLY n 1 18 SER n 1 19 HIS n 1 20 GLY n 1 21 GLY n 1 22 SER n 1 23 MET n 1 24 GLU n 1 25 ASN n 1 26 ASN n 1 27 SER n 1 28 LEU n 1 29 ALA n 1 30 PRO n 1 31 LEU n 1 32 ARG n 1 33 VAL n 1 34 GLY n 1 35 ILE n 1 36 LEU n 1 37 GLY n 1 38 PHE n 1 39 GLY n 1 40 GLY n 1 41 LEU n 1 42 GLY n 1 43 GLN n 1 44 ALA n 1 45 ALA n 1 46 ALA n 1 47 ARG n 1 48 LEU n 1 49 LEU n 1 50 ALA n 1 51 PRO n 1 52 LYS n 1 53 GLN n 1 54 GLU n 1 55 MET n 1 56 LYS n 1 57 LEU n 1 58 VAL n 1 59 ALA n 1 60 VAL n 1 61 ALA n 1 62 ASP n 1 63 ARG n 1 64 HIS n 1 65 GLY n 1 66 TYR n 1 67 LEU n 1 68 TYR n 1 69 ASP n 1 70 ALA n 1 71 ASP n 1 72 GLY n 1 73 ILE n 1 74 ASP n 1 75 VAL n 1 76 ASP n 1 77 ASN n 1 78 ALA n 1 79 VAL n 1 80 GLN n 1 81 ALA n 1 82 TYR n 1 83 THR n 1 84 GLN n 1 85 GLN n 1 86 GLY n 1 87 SER n 1 88 VAL n 1 89 GLY n 1 90 LYS n 1 91 ALA n 1 92 LYS n 1 93 LYS n 1 94 GLY n 1 95 GLN n 1 96 MET n 1 97 SER n 1 98 GLU n 1 99 GLN n 1 100 SER n 1 101 ILE n 1 102 GLU n 1 103 ASP n 1 104 LEU n 1 105 ILE n 1 106 GLY n 1 107 GLU n 1 108 GLY n 1 109 GLU n 1 110 VAL n 1 111 ASP n 1 112 GLY n 1 113 TYR n 1 114 PHE n 1 115 LEU n 1 116 ALA n 1 117 LEU n 1 118 PRO n 1 119 ASN n 1 120 LEU n 1 121 PRO n 1 122 ASN n 1 123 THR n 1 124 PHE n 1 125 MET n 1 126 ALA n 1 127 ASP n 1 128 VAL n 1 129 THR n 1 130 ARG n 1 131 GLN n 1 132 PHE n 1 133 ILE n 1 134 ALA n 1 135 SER n 1 136 GLY n 1 137 TRP n 1 138 GLN n 1 139 GLY n 1 140 VAL n 1 141 LEU n 1 142 VAL n 1 143 ASP n 1 144 ALA n 1 145 LEU n 1 146 ALA n 1 147 ARG n 1 148 THR n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 GLU n 1 153 GLN n 1 154 LEU n 1 155 ILE n 1 156 THR n 1 157 LEU n 1 158 ARG n 1 159 GLU n 1 160 ASP n 1 161 LEU n 1 162 ALA n 1 163 GLN n 1 164 ALA n 1 165 GLY n 1 166 ILE n 1 167 THR n 1 168 TYR n 1 169 MET n 1 170 THR n 1 171 GLY n 1 172 CYS n 1 173 GLY n 1 174 ALA n 1 175 THR n 1 176 PRO n 1 177 GLY n 1 178 LEU n 1 179 LEU n 1 180 THR n 1 181 ALA n 1 182 ALA n 1 183 ALA n 1 184 ALA n 1 185 ILE n 1 186 ALA n 1 187 SER n 1 188 GLN n 1 189 SER n 1 190 PHE n 1 191 GLN n 1 192 GLU n 1 193 ILE n 1 194 HIS n 1 195 GLN n 1 196 VAL n 1 197 LYS n 1 198 ILE n 1 199 THR n 1 200 PHE n 1 201 GLY n 1 202 VAL n 1 203 GLY n 1 204 ILE n 1 205 ALA n 1 206 ASN n 1 207 TRP n 1 208 GLU n 1 209 ALA n 1 210 TYR n 1 211 ARG n 1 212 ALA n 1 213 THR n 1 214 ILE n 1 215 ARG n 1 216 GLU n 1 217 ASP n 1 218 ILE n 1 219 ALA n 1 220 HIS n 1 221 MET n 1 222 PRO n 1 223 GLY n 1 224 TYR n 1 225 ASN n 1 226 VAL n 1 227 ASP n 1 228 LYS n 1 229 ALA n 1 230 GLN n 1 231 ALA n 1 232 MET n 1 233 THR n 1 234 ASP n 1 235 ALA n 1 236 GLU n 1 237 VAL n 1 238 ALA n 1 239 ALA n 1 240 LEU n 1 241 LEU n 1 242 ASP n 1 243 GLN n 1 244 THR n 1 245 ASN n 1 246 GLY n 1 247 ILE n 1 248 LEU n 1 249 ALA n 1 250 LEU n 1 251 GLU n 1 252 ASP n 1 253 MET n 1 254 GLU n 1 255 HIS n 1 256 ALA n 1 257 ASP n 1 258 ASP n 1 259 ILE n 1 260 MET n 1 261 LEU n 1 262 GLU n 1 263 LEU n 1 264 ALA n 1 265 GLY n 1 266 ILE n 1 267 CYS n 1 268 HIS n 1 269 ARG n 1 270 ASP n 1 271 GLN n 1 272 VAL n 1 273 THR n 1 274 VAL n 1 275 GLY n 1 276 GLY n 1 277 VAL n 1 278 VAL n 1 279 ASP n 1 280 THR n 1 281 ARG n 1 282 ASN n 1 283 PRO n 1 284 LYS n 1 285 LYS n 1 286 PRO n 1 287 LEU n 1 288 SER n 1 289 THR n 1 290 HIS n 1 291 VAL n 1 292 LYS n 1 293 ILE n 1 294 THR n 1 295 GLY n 1 296 ARG n 1 297 THR n 1 298 PHE n 1 299 GLU n 1 300 GLY n 1 301 LYS n 1 302 ILE n 1 303 SER n 1 304 SER n 1 305 HIS n 1 306 THR n 1 307 PHE n 1 308 THR n 1 309 LEU n 1 310 GLY n 1 311 ASP n 1 312 GLU n 1 313 THR n 1 314 SER n 1 315 MET n 1 316 ALA n 1 317 ALA n 1 318 ASN n 1 319 VAL n 1 320 CYS n 1 321 GLY n 1 322 PRO n 1 323 ALA n 1 324 PHE n 1 325 GLY n 1 326 TYR n 1 327 LEU n 1 328 LYS n 1 329 ALA n 1 330 GLY n 1 331 TYR n 1 332 GLY n 1 333 LEU n 1 334 HIS n 1 335 ARG n 1 336 GLN n 1 337 GLY n 1 338 LEU n 1 339 LYS n 1 340 GLY n 1 341 LEU n 1 342 PHE n 1 343 THR n 1 344 ALA n 1 345 ALA n 1 346 ASP n 1 347 VAL n 1 348 MET n 1 349 PRO n 1 350 LYS n 1 351 PHE n 1 352 VAL n 1 353 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 353 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene slr0355 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synechocystis sp. PCC 6803' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1148 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q55650_SYNY3 _struct_ref.pdbx_db_accession Q55650 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MENNSLAPLRVGILGFGGLGQAAARLLAPKQEMKLVAVADRHGYLYDADGIDVDNAVQAYTQQGSVGKAKKGQMSEQSIE DLIGEGEVDGYFLALPNLPNTFMADVTRQFIASGWQGVLVDALKRTSAVEQLITLREDLAQAGITYMTGCGATPGLLTAA AAIASQSFQEIHQVKITFGVGIANWEAYRATIREDIAHMPGYNVDKAQAMTDAEVAALLDQTNGILALEDMEHADDIMLE LAGICHRDQVTVGGVVDTRNPKKPLSTHVKITGRTFEGKISSHTFTLGDETSMAANVCGPAFGYLKAGYGLHRQGLKGLF TAADVMPKFVR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ITD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 353 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q55650 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 331 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 331 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6ITD MET A 1 ? UNP Q55650 ? ? 'expression tag' -21 1 1 6ITD LYS A 2 ? UNP Q55650 ? ? 'expression tag' -20 2 1 6ITD HIS A 3 ? UNP Q55650 ? ? 'expression tag' -19 3 1 6ITD HIS A 4 ? UNP Q55650 ? ? 'expression tag' -18 4 1 6ITD HIS A 5 ? UNP Q55650 ? ? 'expression tag' -17 5 1 6ITD HIS A 6 ? UNP Q55650 ? ? 'expression tag' -16 6 1 6ITD HIS A 7 ? UNP Q55650 ? ? 'expression tag' -15 7 1 6ITD HIS A 8 ? UNP Q55650 ? ? 'expression tag' -14 8 1 6ITD HIS A 9 ? UNP Q55650 ? ? 'expression tag' -13 9 1 6ITD HIS A 10 ? UNP Q55650 ? ? 'expression tag' -12 10 1 6ITD GLY A 11 ? UNP Q55650 ? ? 'expression tag' -11 11 1 6ITD GLY A 12 ? UNP Q55650 ? ? 'expression tag' -10 12 1 6ITD LEU A 13 ? UNP Q55650 ? ? 'expression tag' -9 13 1 6ITD VAL A 14 ? UNP Q55650 ? ? 'expression tag' -8 14 1 6ITD PRO A 15 ? UNP Q55650 ? ? 'expression tag' -7 15 1 6ITD ARG A 16 ? UNP Q55650 ? ? 'expression tag' -6 16 1 6ITD GLY A 17 ? UNP Q55650 ? ? 'expression tag' -5 17 1 6ITD SER A 18 ? UNP Q55650 ? ? 'expression tag' -4 18 1 6ITD HIS A 19 ? UNP Q55650 ? ? 'expression tag' -3 19 1 6ITD GLY A 20 ? UNP Q55650 ? ? 'expression tag' -2 20 1 6ITD GLY A 21 ? UNP Q55650 ? ? 'expression tag' -1 21 1 6ITD SER A 22 ? UNP Q55650 ? ? 'expression tag' 0 22 1 6ITD ALA A 146 ? UNP Q55650 LYS 124 'engineered mutation' 124 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IKT non-polymer . '3-(1-AMINOETHYL)NONANEDIOIC ACID' ? 'C11 H21 N O4' 231.289 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ITD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) polyethylene glycol 3350, 0.2 M ammonium acetate, 5mM 3-(1-aminoethyl)-nonanedioic acid' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-17 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ITD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 61.63 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19876 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.7 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 981 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.588 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.203 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.973 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.01 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.02 _refine.B_iso_max ? _refine.B_iso_mean 48.195 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ITD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 61.63 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18887 _refine.ls_number_reflns_R_free 959 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.80 _refine.ls_percent_reflns_R_free 4.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19033 _refine.ls_R_factor_R_free 0.24883 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18749 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6IR4 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.204 _refine.pdbx_overall_ESU_R_Free 0.185 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.067 _refine.overall_SU_ML 0.138 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2455 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 2520 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 61.63 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.019 2511 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2424 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.238 1.958 3398 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.848 3.003 5562 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.746 5.000 327 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.000 24.766 107 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.760 15.000 411 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.170 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.073 0.200 389 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 2895 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 558 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.368 4.537 1311 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.368 4.537 1310 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.364 6.793 1637 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.363 6.793 1638 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.124 5.099 1200 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.120 5.100 1198 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.012 7.474 1761 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.556 36.763 2760 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 6.552 36.743 2748 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.004 _refine_ls_shell.d_res_low 2.056 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_R_work 1393 _refine_ls_shell.percent_reflns_obs 99.45 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.313 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.246 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6ITD _struct.title ;Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ITD _struct_keywords.text 'BioU, biotin biosynthesis, Synechocystis, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 39 ? ALA A 50 ? GLY A 17 ALA A 28 1 ? 12 HELX_P HELX_P2 AA2 ASP A 74 ? GLY A 86 ? ASP A 52 GLY A 64 1 ? 13 HELX_P HELX_P3 AA3 SER A 87 ? ALA A 91 ? SER A 65 ALA A 69 5 ? 5 HELX_P HELX_P4 AA4 GLN A 99 ? GLY A 108 ? GLN A 77 GLY A 86 1 ? 10 HELX_P HELX_P5 AA5 THR A 123 ? GLY A 136 ? THR A 101 GLY A 114 1 ? 14 HELX_P HELX_P6 AA6 ARG A 147 ? LEU A 157 ? ARG A 125 LEU A 135 1 ? 11 HELX_P HELX_P7 AA7 LEU A 157 ? GLY A 165 ? LEU A 135 GLY A 143 1 ? 9 HELX_P HELX_P8 AA8 GLY A 177 ? SER A 187 ? GLY A 155 SER A 165 1 ? 11 HELX_P HELX_P9 AA9 GLN A 188 ? PHE A 190 ? GLN A 166 PHE A 168 5 ? 3 HELX_P HELX_P10 AB1 ASN A 206 ? ARG A 211 ? ASN A 184 ARG A 189 1 ? 6 HELX_P HELX_P11 AB2 THR A 213 ? ALA A 219 ? THR A 191 ALA A 197 1 ? 7 HELX_P HELX_P12 AB3 ASN A 225 ? ALA A 231 ? ASN A 203 ALA A 209 1 ? 7 HELX_P HELX_P13 AB4 THR A 233 ? THR A 244 ? THR A 211 THR A 222 1 ? 12 HELX_P HELX_P14 AB5 ALA A 256 ? ALA A 264 ? ALA A 234 ALA A 242 1 ? 9 HELX_P HELX_P15 AB6 HIS A 268 ? ASP A 270 ? HIS A 246 ASP A 248 5 ? 3 HELX_P HELX_P16 AB7 SER A 314 ? GLN A 336 ? SER A 292 GLN A 314 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 120 A . ? LEU 98 A PRO 121 A ? PRO 99 A 1 -4.39 2 THR 175 A . ? THR 153 A PRO 176 A ? PRO 154 A 1 -6.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 94 ? MET A 96 ? GLY A 72 MET A 74 AA1 2 GLY A 65 ? TYR A 68 ? GLY A 43 TYR A 46 AA1 3 MET A 55 ? ASP A 62 ? MET A 33 ASP A 40 AA1 4 LEU A 31 ? LEU A 36 ? LEU A 9 LEU A 14 AA1 5 GLY A 112 ? LEU A 115 ? GLY A 90 LEU A 93 AA1 6 GLY A 139 ? ASP A 143 ? GLY A 117 ASP A 121 AA1 7 ILE A 166 ? THR A 170 ? ILE A 144 THR A 148 AA1 8 GLY A 340 ? THR A 343 ? GLY A 318 THR A 321 AA2 1 ILE A 247 ? LEU A 250 ? ILE A 225 LEU A 228 AA2 2 VAL A 272 ? ASP A 279 ? VAL A 250 ASP A 257 AA2 3 GLU A 192 ? GLY A 203 ? GLU A 170 GLY A 181 AA2 4 HIS A 290 ? ARG A 296 ? HIS A 268 ARG A 274 AA2 5 ILE A 302 ? THR A 308 ? ILE A 280 THR A 286 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 95 ? O GLN A 73 N TYR A 66 ? N TYR A 44 AA1 2 3 O GLY A 65 ? O GLY A 43 N ASP A 62 ? N ASP A 40 AA1 3 4 O LYS A 56 ? O LYS A 34 N LEU A 31 ? N LEU A 9 AA1 4 5 N LEU A 36 ? N LEU A 14 O PHE A 114 ? O PHE A 92 AA1 5 6 N LEU A 115 ? N LEU A 93 O VAL A 142 ? O VAL A 120 AA1 6 7 N LEU A 141 ? N LEU A 119 O MET A 169 ? O MET A 147 AA1 7 8 N TYR A 168 ? N TYR A 146 O GLY A 340 ? O GLY A 318 AA2 1 2 N LEU A 250 ? N LEU A 228 O GLY A 276 ? O GLY A 254 AA2 2 3 O ASP A 279 ? O ASP A 257 N VAL A 202 ? N VAL A 180 AA2 3 4 N HIS A 194 ? N HIS A 172 O THR A 294 ? O THR A 272 AA2 4 5 N ILE A 293 ? N ILE A 271 O HIS A 305 ? O HIS A 283 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id IKT _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'binding site for residue IKT A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 PHE A 200 ? PHE A 178 . ? 1_555 ? 2 AC1 11 GLY A 201 ? GLY A 179 . ? 1_555 ? 3 AC1 11 ASP A 217 ? ASP A 195 . ? 1_555 ? 4 AC1 11 MET A 253 ? MET A 231 . ? 1_555 ? 5 AC1 11 HIS A 255 ? HIS A 233 . ? 1_555 ? 6 AC1 11 LYS A 285 ? LYS A 263 . ? 1_555 ? 7 AC1 11 THR A 289 ? THR A 267 . ? 1_555 ? 8 AC1 11 SER A 314 ? SER A 292 . ? 1_555 ? 9 AC1 11 MET A 315 ? MET A 293 . ? 1_555 ? 10 AC1 11 ASN A 318 ? ASN A 296 . ? 1_555 ? 11 AC1 11 HOH C . ? HOH A 510 . ? 1_555 ? # _atom_sites.entry_id 6ITD _atom_sites.fract_transf_matrix[1][1] 0.014051 _atom_sites.fract_transf_matrix[1][2] 0.008113 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016225 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010182 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 LYS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 GLY 11 -11 ? ? ? A . n A 1 12 GLY 12 -10 ? ? ? A . n A 1 13 LEU 13 -9 ? ? ? A . n A 1 14 VAL 14 -8 ? ? ? A . n A 1 15 PRO 15 -7 ? ? ? A . n A 1 16 ARG 16 -6 ? ? ? A . n A 1 17 GLY 17 -5 ? ? ? A . n A 1 18 SER 18 -4 ? ? ? A . n A 1 19 HIS 19 -3 ? ? ? A . n A 1 20 GLY 20 -2 ? ? ? A . n A 1 21 GLY 21 -1 ? ? ? A . n A 1 22 SER 22 0 ? ? ? A . n A 1 23 MET 23 1 ? ? ? A . n A 1 24 GLU 24 2 ? ? ? A . n A 1 25 ASN 25 3 ? ? ? A . n A 1 26 ASN 26 4 4 ASN ASN A . n A 1 27 SER 27 5 5 SER SER A . n A 1 28 LEU 28 6 6 LEU LEU A . n A 1 29 ALA 29 7 7 ALA ALA A . n A 1 30 PRO 30 8 8 PRO PRO A . n A 1 31 LEU 31 9 9 LEU LEU A . n A 1 32 ARG 32 10 10 ARG ARG A . n A 1 33 VAL 33 11 11 VAL VAL A . n A 1 34 GLY 34 12 12 GLY GLY A . n A 1 35 ILE 35 13 13 ILE ILE A . n A 1 36 LEU 36 14 14 LEU LEU A . n A 1 37 GLY 37 15 15 GLY GLY A . n A 1 38 PHE 38 16 16 PHE PHE A . n A 1 39 GLY 39 17 17 GLY GLY A . n A 1 40 GLY 40 18 18 GLY GLY A . n A 1 41 LEU 41 19 19 LEU LEU A . n A 1 42 GLY 42 20 20 GLY GLY A . n A 1 43 GLN 43 21 21 GLN GLN A . n A 1 44 ALA 44 22 22 ALA ALA A . n A 1 45 ALA 45 23 23 ALA ALA A . n A 1 46 ALA 46 24 24 ALA ALA A . n A 1 47 ARG 47 25 25 ARG ARG A . n A 1 48 LEU 48 26 26 LEU LEU A . n A 1 49 LEU 49 27 27 LEU LEU A . n A 1 50 ALA 50 28 28 ALA ALA A . n A 1 51 PRO 51 29 29 PRO PRO A . n A 1 52 LYS 52 30 30 LYS LYS A . n A 1 53 GLN 53 31 31 GLN GLN A . n A 1 54 GLU 54 32 32 GLU GLU A . n A 1 55 MET 55 33 33 MET MET A . n A 1 56 LYS 56 34 34 LYS LYS A . n A 1 57 LEU 57 35 35 LEU LEU A . n A 1 58 VAL 58 36 36 VAL VAL A . n A 1 59 ALA 59 37 37 ALA ALA A . n A 1 60 VAL 60 38 38 VAL VAL A . n A 1 61 ALA 61 39 39 ALA ALA A . n A 1 62 ASP 62 40 40 ASP ASP A . n A 1 63 ARG 63 41 41 ARG ARG A . n A 1 64 HIS 64 42 42 HIS HIS A . n A 1 65 GLY 65 43 43 GLY GLY A . n A 1 66 TYR 66 44 44 TYR TYR A . n A 1 67 LEU 67 45 45 LEU LEU A . n A 1 68 TYR 68 46 46 TYR TYR A . n A 1 69 ASP 69 47 47 ASP ASP A . n A 1 70 ALA 70 48 48 ALA ALA A . n A 1 71 ASP 71 49 49 ASP ASP A . n A 1 72 GLY 72 50 50 GLY GLY A . n A 1 73 ILE 73 51 51 ILE ILE A . n A 1 74 ASP 74 52 52 ASP ASP A . n A 1 75 VAL 75 53 53 VAL VAL A . n A 1 76 ASP 76 54 54 ASP ASP A . n A 1 77 ASN 77 55 55 ASN ASN A . n A 1 78 ALA 78 56 56 ALA ALA A . n A 1 79 VAL 79 57 57 VAL VAL A . n A 1 80 GLN 80 58 58 GLN GLN A . n A 1 81 ALA 81 59 59 ALA ALA A . n A 1 82 TYR 82 60 60 TYR TYR A . n A 1 83 THR 83 61 61 THR THR A . n A 1 84 GLN 84 62 62 GLN GLN A . n A 1 85 GLN 85 63 63 GLN GLN A . n A 1 86 GLY 86 64 64 GLY GLY A . n A 1 87 SER 87 65 65 SER SER A . n A 1 88 VAL 88 66 66 VAL VAL A . n A 1 89 GLY 89 67 67 GLY GLY A . n A 1 90 LYS 90 68 68 LYS LYS A . n A 1 91 ALA 91 69 69 ALA ALA A . n A 1 92 LYS 92 70 70 LYS LYS A . n A 1 93 LYS 93 71 71 LYS LYS A . n A 1 94 GLY 94 72 72 GLY GLY A . n A 1 95 GLN 95 73 73 GLN GLN A . n A 1 96 MET 96 74 74 MET MET A . n A 1 97 SER 97 75 75 SER SER A . n A 1 98 GLU 98 76 76 GLU GLU A . n A 1 99 GLN 99 77 77 GLN GLN A . n A 1 100 SER 100 78 78 SER SER A . n A 1 101 ILE 101 79 79 ILE ILE A . n A 1 102 GLU 102 80 80 GLU GLU A . n A 1 103 ASP 103 81 81 ASP ASP A . n A 1 104 LEU 104 82 82 LEU LEU A . n A 1 105 ILE 105 83 83 ILE ILE A . n A 1 106 GLY 106 84 84 GLY GLY A . n A 1 107 GLU 107 85 85 GLU GLU A . n A 1 108 GLY 108 86 86 GLY GLY A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 VAL 110 88 88 VAL VAL A . n A 1 111 ASP 111 89 89 ASP ASP A . n A 1 112 GLY 112 90 90 GLY GLY A . n A 1 113 TYR 113 91 91 TYR TYR A . n A 1 114 PHE 114 92 92 PHE PHE A . n A 1 115 LEU 115 93 93 LEU LEU A . n A 1 116 ALA 116 94 94 ALA ALA A . n A 1 117 LEU 117 95 95 LEU LEU A . n A 1 118 PRO 118 96 96 PRO PRO A . n A 1 119 ASN 119 97 97 ASN ASN A . n A 1 120 LEU 120 98 98 LEU LEU A . n A 1 121 PRO 121 99 99 PRO PRO A . n A 1 122 ASN 122 100 100 ASN ASN A . n A 1 123 THR 123 101 101 THR THR A . n A 1 124 PHE 124 102 102 PHE PHE A . n A 1 125 MET 125 103 103 MET MET A . n A 1 126 ALA 126 104 104 ALA ALA A . n A 1 127 ASP 127 105 105 ASP ASP A . n A 1 128 VAL 128 106 106 VAL VAL A . n A 1 129 THR 129 107 107 THR THR A . n A 1 130 ARG 130 108 108 ARG ARG A . n A 1 131 GLN 131 109 109 GLN GLN A . n A 1 132 PHE 132 110 110 PHE PHE A . n A 1 133 ILE 133 111 111 ILE ILE A . n A 1 134 ALA 134 112 112 ALA ALA A . n A 1 135 SER 135 113 113 SER SER A . n A 1 136 GLY 136 114 114 GLY GLY A . n A 1 137 TRP 137 115 115 TRP TRP A . n A 1 138 GLN 138 116 116 GLN GLN A . n A 1 139 GLY 139 117 117 GLY GLY A . n A 1 140 VAL 140 118 118 VAL VAL A . n A 1 141 LEU 141 119 119 LEU LEU A . n A 1 142 VAL 142 120 120 VAL VAL A . n A 1 143 ASP 143 121 121 ASP ASP A . n A 1 144 ALA 144 122 122 ALA ALA A . n A 1 145 LEU 145 123 123 LEU LEU A . n A 1 146 ALA 146 124 124 ALA ALA A . n A 1 147 ARG 147 125 125 ARG ARG A . n A 1 148 THR 148 126 126 THR THR A . n A 1 149 SER 149 127 127 SER SER A . n A 1 150 ALA 150 128 128 ALA ALA A . n A 1 151 VAL 151 129 129 VAL VAL A . n A 1 152 GLU 152 130 130 GLU GLU A . n A 1 153 GLN 153 131 131 GLN GLN A . n A 1 154 LEU 154 132 132 LEU LEU A . n A 1 155 ILE 155 133 133 ILE ILE A . n A 1 156 THR 156 134 134 THR THR A . n A 1 157 LEU 157 135 135 LEU LEU A . n A 1 158 ARG 158 136 136 ARG ARG A . n A 1 159 GLU 159 137 137 GLU GLU A . n A 1 160 ASP 160 138 138 ASP ASP A . n A 1 161 LEU 161 139 139 LEU LEU A . n A 1 162 ALA 162 140 140 ALA ALA A . n A 1 163 GLN 163 141 141 GLN GLN A . n A 1 164 ALA 164 142 142 ALA ALA A . n A 1 165 GLY 165 143 143 GLY GLY A . n A 1 166 ILE 166 144 144 ILE ILE A . n A 1 167 THR 167 145 145 THR THR A . n A 1 168 TYR 168 146 146 TYR TYR A . n A 1 169 MET 169 147 147 MET MET A . n A 1 170 THR 170 148 148 THR THR A . n A 1 171 GLY 171 149 149 GLY GLY A . n A 1 172 CYS 172 150 150 CYS CYS A . n A 1 173 GLY 173 151 151 GLY GLY A . n A 1 174 ALA 174 152 152 ALA ALA A . n A 1 175 THR 175 153 153 THR THR A . n A 1 176 PRO 176 154 154 PRO PRO A . n A 1 177 GLY 177 155 155 GLY GLY A . n A 1 178 LEU 178 156 156 LEU LEU A . n A 1 179 LEU 179 157 157 LEU LEU A . n A 1 180 THR 180 158 158 THR THR A . n A 1 181 ALA 181 159 159 ALA ALA A . n A 1 182 ALA 182 160 160 ALA ALA A . n A 1 183 ALA 183 161 161 ALA ALA A . n A 1 184 ALA 184 162 162 ALA ALA A . n A 1 185 ILE 185 163 163 ILE ILE A . n A 1 186 ALA 186 164 164 ALA ALA A . n A 1 187 SER 187 165 165 SER SER A . n A 1 188 GLN 188 166 166 GLN GLN A . n A 1 189 SER 189 167 167 SER SER A . n A 1 190 PHE 190 168 168 PHE PHE A . n A 1 191 GLN 191 169 169 GLN GLN A . n A 1 192 GLU 192 170 170 GLU GLU A . n A 1 193 ILE 193 171 171 ILE ILE A . n A 1 194 HIS 194 172 172 HIS HIS A . n A 1 195 GLN 195 173 173 GLN GLN A . n A 1 196 VAL 196 174 174 VAL VAL A . n A 1 197 LYS 197 175 175 LYS LYS A . n A 1 198 ILE 198 176 176 ILE ILE A . n A 1 199 THR 199 177 177 THR THR A . n A 1 200 PHE 200 178 178 PHE PHE A . n A 1 201 GLY 201 179 179 GLY GLY A . n A 1 202 VAL 202 180 180 VAL VAL A . n A 1 203 GLY 203 181 181 GLY GLY A . n A 1 204 ILE 204 182 182 ILE ILE A . n A 1 205 ALA 205 183 183 ALA ALA A . n A 1 206 ASN 206 184 184 ASN ASN A . n A 1 207 TRP 207 185 185 TRP TRP A . n A 1 208 GLU 208 186 186 GLU GLU A . n A 1 209 ALA 209 187 187 ALA ALA A . n A 1 210 TYR 210 188 188 TYR TYR A . n A 1 211 ARG 211 189 189 ARG ARG A . n A 1 212 ALA 212 190 190 ALA ALA A . n A 1 213 THR 213 191 191 THR THR A . n A 1 214 ILE 214 192 192 ILE ILE A . n A 1 215 ARG 215 193 193 ARG ARG A . n A 1 216 GLU 216 194 194 GLU GLU A . n A 1 217 ASP 217 195 195 ASP ASP A . n A 1 218 ILE 218 196 196 ILE ILE A . n A 1 219 ALA 219 197 197 ALA ALA A . n A 1 220 HIS 220 198 198 HIS HIS A . n A 1 221 MET 221 199 199 MET MET A . n A 1 222 PRO 222 200 200 PRO PRO A . n A 1 223 GLY 223 201 201 GLY GLY A . n A 1 224 TYR 224 202 202 TYR TYR A . n A 1 225 ASN 225 203 203 ASN ASN A . n A 1 226 VAL 226 204 204 VAL VAL A . n A 1 227 ASP 227 205 205 ASP ASP A . n A 1 228 LYS 228 206 206 LYS LYS A . n A 1 229 ALA 229 207 207 ALA ALA A . n A 1 230 GLN 230 208 208 GLN GLN A . n A 1 231 ALA 231 209 209 ALA ALA A . n A 1 232 MET 232 210 210 MET MET A . n A 1 233 THR 233 211 211 THR THR A . n A 1 234 ASP 234 212 212 ASP ASP A . n A 1 235 ALA 235 213 213 ALA ALA A . n A 1 236 GLU 236 214 214 GLU GLU A . n A 1 237 VAL 237 215 215 VAL VAL A . n A 1 238 ALA 238 216 216 ALA ALA A . n A 1 239 ALA 239 217 217 ALA ALA A . n A 1 240 LEU 240 218 218 LEU LEU A . n A 1 241 LEU 241 219 219 LEU LEU A . n A 1 242 ASP 242 220 220 ASP ASP A . n A 1 243 GLN 243 221 221 GLN GLN A . n A 1 244 THR 244 222 222 THR THR A . n A 1 245 ASN 245 223 223 ASN ASN A . n A 1 246 GLY 246 224 224 GLY GLY A . n A 1 247 ILE 247 225 225 ILE ILE A . n A 1 248 LEU 248 226 226 LEU LEU A . n A 1 249 ALA 249 227 227 ALA ALA A . n A 1 250 LEU 250 228 228 LEU LEU A . n A 1 251 GLU 251 229 229 GLU GLU A . n A 1 252 ASP 252 230 230 ASP ASP A . n A 1 253 MET 253 231 231 MET MET A . n A 1 254 GLU 254 232 232 GLU GLU A . n A 1 255 HIS 255 233 233 HIS HIS A . n A 1 256 ALA 256 234 234 ALA ALA A . n A 1 257 ASP 257 235 235 ASP ASP A . n A 1 258 ASP 258 236 236 ASP ASP A . n A 1 259 ILE 259 237 237 ILE ILE A . n A 1 260 MET 260 238 238 MET MET A . n A 1 261 LEU 261 239 239 LEU LEU A . n A 1 262 GLU 262 240 240 GLU GLU A . n A 1 263 LEU 263 241 241 LEU LEU A . n A 1 264 ALA 264 242 242 ALA ALA A . n A 1 265 GLY 265 243 243 GLY GLY A . n A 1 266 ILE 266 244 244 ILE ILE A . n A 1 267 CYS 267 245 245 CYS CYS A . n A 1 268 HIS 268 246 246 HIS HIS A . n A 1 269 ARG 269 247 247 ARG ARG A . n A 1 270 ASP 270 248 248 ASP ASP A . n A 1 271 GLN 271 249 249 GLN GLN A . n A 1 272 VAL 272 250 250 VAL VAL A . n A 1 273 THR 273 251 251 THR THR A . n A 1 274 VAL 274 252 252 VAL VAL A . n A 1 275 GLY 275 253 253 GLY GLY A . n A 1 276 GLY 276 254 254 GLY GLY A . n A 1 277 VAL 277 255 255 VAL VAL A . n A 1 278 VAL 278 256 256 VAL VAL A . n A 1 279 ASP 279 257 257 ASP ASP A . n A 1 280 THR 280 258 258 THR THR A . n A 1 281 ARG 281 259 259 ARG ARG A . n A 1 282 ASN 282 260 260 ASN ASN A . n A 1 283 PRO 283 261 261 PRO PRO A . n A 1 284 LYS 284 262 262 LYS LYS A . n A 1 285 LYS 285 263 263 LYS LYS A . n A 1 286 PRO 286 264 264 PRO PRO A . n A 1 287 LEU 287 265 265 LEU LEU A . n A 1 288 SER 288 266 266 SER SER A . n A 1 289 THR 289 267 267 THR THR A . n A 1 290 HIS 290 268 268 HIS HIS A . n A 1 291 VAL 291 269 269 VAL VAL A . n A 1 292 LYS 292 270 270 LYS LYS A . n A 1 293 ILE 293 271 271 ILE ILE A . n A 1 294 THR 294 272 272 THR THR A . n A 1 295 GLY 295 273 273 GLY GLY A . n A 1 296 ARG 296 274 274 ARG ARG A . n A 1 297 THR 297 275 275 THR THR A . n A 1 298 PHE 298 276 276 PHE PHE A . n A 1 299 GLU 299 277 277 GLU GLU A . n A 1 300 GLY 300 278 278 GLY GLY A . n A 1 301 LYS 301 279 279 LYS LYS A . n A 1 302 ILE 302 280 280 ILE ILE A . n A 1 303 SER 303 281 281 SER SER A . n A 1 304 SER 304 282 282 SER SER A . n A 1 305 HIS 305 283 283 HIS HIS A . n A 1 306 THR 306 284 284 THR THR A . n A 1 307 PHE 307 285 285 PHE PHE A . n A 1 308 THR 308 286 286 THR THR A . n A 1 309 LEU 309 287 287 LEU LEU A . n A 1 310 GLY 310 288 288 GLY GLY A . n A 1 311 ASP 311 289 289 ASP ASP A . n A 1 312 GLU 312 290 290 GLU GLU A . n A 1 313 THR 313 291 291 THR THR A . n A 1 314 SER 314 292 292 SER SER A . n A 1 315 MET 315 293 293 MET MET A . n A 1 316 ALA 316 294 294 ALA ALA A . n A 1 317 ALA 317 295 295 ALA ALA A . n A 1 318 ASN 318 296 296 ASN ASN A . n A 1 319 VAL 319 297 297 VAL VAL A . n A 1 320 CYS 320 298 298 CYS CYS A . n A 1 321 GLY 321 299 299 GLY GLY A . n A 1 322 PRO 322 300 300 PRO PRO A . n A 1 323 ALA 323 301 301 ALA ALA A . n A 1 324 PHE 324 302 302 PHE PHE A . n A 1 325 GLY 325 303 303 GLY GLY A . n A 1 326 TYR 326 304 304 TYR TYR A . n A 1 327 LEU 327 305 305 LEU LEU A . n A 1 328 LYS 328 306 306 LYS LYS A . n A 1 329 ALA 329 307 307 ALA ALA A . n A 1 330 GLY 330 308 308 GLY GLY A . n A 1 331 TYR 331 309 309 TYR TYR A . n A 1 332 GLY 332 310 310 GLY GLY A . n A 1 333 LEU 333 311 311 LEU LEU A . n A 1 334 HIS 334 312 312 HIS HIS A . n A 1 335 ARG 335 313 313 ARG ARG A . n A 1 336 GLN 336 314 314 GLN GLN A . n A 1 337 GLY 337 315 315 GLY GLY A . n A 1 338 LEU 338 316 316 LEU LEU A . n A 1 339 LYS 339 317 317 LYS LYS A . n A 1 340 GLY 340 318 318 GLY GLY A . n A 1 341 LEU 341 319 319 LEU LEU A . n A 1 342 PHE 342 320 320 PHE PHE A . n A 1 343 THR 343 321 321 THR THR A . n A 1 344 ALA 344 322 322 ALA ALA A . n A 1 345 ALA 345 323 323 ALA ALA A . n A 1 346 ASP 346 324 324 ASP ASP A . n A 1 347 VAL 347 325 325 VAL VAL A . n A 1 348 MET 348 326 326 MET MET A . n A 1 349 PRO 349 327 327 PRO PRO A . n A 1 350 LYS 350 328 328 LYS LYS A . n A 1 351 PHE 351 329 329 PHE PHE A . n A 1 352 VAL 352 330 330 VAL VAL A . n A 1 353 ARG 353 331 331 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IKT 1 401 401 IKT DRG A . C 3 HOH 1 501 26 HOH HOH A . C 3 HOH 2 502 72 HOH HOH A . C 3 HOH 3 503 20 HOH HOH A . C 3 HOH 4 504 85 HOH HOH A . C 3 HOH 5 505 93 HOH HOH A . C 3 HOH 6 506 33 HOH HOH A . C 3 HOH 7 507 88 HOH HOH A . C 3 HOH 8 508 58 HOH HOH A . C 3 HOH 9 509 77 HOH HOH A . C 3 HOH 10 510 54 HOH HOH A . C 3 HOH 11 511 65 HOH HOH A . C 3 HOH 12 512 42 HOH HOH A . C 3 HOH 13 513 2 HOH HOH A . C 3 HOH 14 514 96 HOH HOH A . C 3 HOH 15 515 45 HOH HOH A . C 3 HOH 16 516 66 HOH HOH A . C 3 HOH 17 517 73 HOH HOH A . C 3 HOH 18 518 23 HOH HOH A . C 3 HOH 19 519 86 HOH HOH A . C 3 HOH 20 520 1 HOH HOH A . C 3 HOH 21 521 22 HOH HOH A . C 3 HOH 22 522 74 HOH HOH A . C 3 HOH 23 523 56 HOH HOH A . C 3 HOH 24 524 97 HOH HOH A . C 3 HOH 25 525 78 HOH HOH A . C 3 HOH 26 526 29 HOH HOH A . C 3 HOH 27 527 95 HOH HOH A . C 3 HOH 28 528 84 HOH HOH A . C 3 HOH 29 529 46 HOH HOH A . C 3 HOH 30 530 13 HOH HOH A . C 3 HOH 31 531 14 HOH HOH A . C 3 HOH 32 532 50 HOH HOH A . C 3 HOH 33 533 24 HOH HOH A . C 3 HOH 34 534 44 HOH HOH A . C 3 HOH 35 535 16 HOH HOH A . C 3 HOH 36 536 12 HOH HOH A . C 3 HOH 37 537 62 HOH HOH A . C 3 HOH 38 538 25 HOH HOH A . C 3 HOH 39 539 94 HOH HOH A . C 3 HOH 40 540 55 HOH HOH A . C 3 HOH 41 541 57 HOH HOH A . C 3 HOH 42 542 60 HOH HOH A . C 3 HOH 43 543 11 HOH HOH A . C 3 HOH 44 544 76 HOH HOH A . C 3 HOH 45 545 80 HOH HOH A . C 3 HOH 46 546 63 HOH HOH A . C 3 HOH 47 547 51 HOH HOH A . C 3 HOH 48 548 75 HOH HOH A . C 3 HOH 49 549 89 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5400 ? 1 MORE -17 ? 1 'SSA (A^2)' 24810 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 32.7370000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 542 ? C HOH . 2 1 A HOH 545 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-01-15 2 'Structure model' 1 1 2020-02-26 3 'Structure model' 1 2 2020-04-08 4 'Structure model' 1 3 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 3 'Structure model' '_citation.journal_volume' 10 3 'Structure model' '_citation.page_first' 11 3 'Structure model' '_citation.page_last' 12 3 'Structure model' '_citation_author.identifier_ORCID' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 236 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 236 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 236 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.14 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.84 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 47 ? ? -160.67 93.24 2 1 SER A 75 ? ? -175.36 134.25 3 1 GLN A 77 ? ? -117.25 59.71 4 1 ALA A 94 ? ? -90.39 51.82 5 1 PRO A 99 ? ? -69.90 -178.20 6 1 ASN A 100 ? ? -59.39 -8.91 7 1 CYS A 150 ? ? -106.87 40.16 8 1 ALA A 190 ? ? 93.79 -7.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A LYS -20 ? A LYS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A GLY -11 ? A GLY 11 12 1 Y 1 A GLY -10 ? A GLY 12 13 1 Y 1 A LEU -9 ? A LEU 13 14 1 Y 1 A VAL -8 ? A VAL 14 15 1 Y 1 A PRO -7 ? A PRO 15 16 1 Y 1 A ARG -6 ? A ARG 16 17 1 Y 1 A GLY -5 ? A GLY 17 18 1 Y 1 A SER -4 ? A SER 18 19 1 Y 1 A HIS -3 ? A HIS 19 20 1 Y 1 A GLY -2 ? A GLY 20 21 1 Y 1 A GLY -1 ? A GLY 21 22 1 Y 1 A SER 0 ? A SER 22 23 1 Y 1 A MET 1 ? A MET 23 24 1 Y 1 A GLU 2 ? A GLU 24 25 1 Y 1 A ASN 3 ? A ASN 25 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 IKT C1 C N N 161 IKT O1 O N N 162 IKT O2 O N N 163 IKT C2 C N N 164 IKT C3 C N S 165 IKT C4 C N N 166 IKT C5 C N N 167 IKT C6 C N N 168 IKT C7 C N N 169 IKT C8 C N N 170 IKT C9 C N N 171 IKT O3 O N N 172 IKT O4 O N N 173 IKT "C1'" C N S 174 IKT "C2'" C N N 175 IKT "N1'" N N N 176 IKT HO2 H N N 177 IKT H21 H N N 178 IKT H22 H N N 179 IKT H3 H N N 180 IKT H41 H N N 181 IKT H42 H N N 182 IKT H51 H N N 183 IKT H52 H N N 184 IKT H61 H N N 185 IKT H62 H N N 186 IKT H71 H N N 187 IKT H72 H N N 188 IKT H81 H N N 189 IKT H82 H N N 190 IKT HO4 H N N 191 IKT "H1'" H N N 192 IKT "H2'1" H N N 193 IKT "H2'2" H N N 194 IKT "H2'3" H N N 195 IKT HN11 H N N 196 IKT HN12 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MET N N N N 267 MET CA C N S 268 MET C C N N 269 MET O O N N 270 MET CB C N N 271 MET CG C N N 272 MET SD S N N 273 MET CE C N N 274 MET OXT O N N 275 MET H H N N 276 MET H2 H N N 277 MET HA H N N 278 MET HB2 H N N 279 MET HB3 H N N 280 MET HG2 H N N 281 MET HG3 H N N 282 MET HE1 H N N 283 MET HE2 H N N 284 MET HE3 H N N 285 MET HXT H N N 286 PHE N N N N 287 PHE CA C N S 288 PHE C C N N 289 PHE O O N N 290 PHE CB C N N 291 PHE CG C Y N 292 PHE CD1 C Y N 293 PHE CD2 C Y N 294 PHE CE1 C Y N 295 PHE CE2 C Y N 296 PHE CZ C Y N 297 PHE OXT O N N 298 PHE H H N N 299 PHE H2 H N N 300 PHE HA H N N 301 PHE HB2 H N N 302 PHE HB3 H N N 303 PHE HD1 H N N 304 PHE HD2 H N N 305 PHE HE1 H N N 306 PHE HE2 H N N 307 PHE HZ H N N 308 PHE HXT H N N 309 PRO N N N N 310 PRO CA C N S 311 PRO C C N N 312 PRO O O N N 313 PRO CB C N N 314 PRO CG C N N 315 PRO CD C N N 316 PRO OXT O N N 317 PRO H H N N 318 PRO HA H N N 319 PRO HB2 H N N 320 PRO HB3 H N N 321 PRO HG2 H N N 322 PRO HG3 H N N 323 PRO HD2 H N N 324 PRO HD3 H N N 325 PRO HXT H N N 326 SER N N N N 327 SER CA C N S 328 SER C C N N 329 SER O O N N 330 SER CB C N N 331 SER OG O N N 332 SER OXT O N N 333 SER H H N N 334 SER H2 H N N 335 SER HA H N N 336 SER HB2 H N N 337 SER HB3 H N N 338 SER HG H N N 339 SER HXT H N N 340 THR N N N N 341 THR CA C N S 342 THR C C N N 343 THR O O N N 344 THR CB C N R 345 THR OG1 O N N 346 THR CG2 C N N 347 THR OXT O N N 348 THR H H N N 349 THR H2 H N N 350 THR HA H N N 351 THR HB H N N 352 THR HG1 H N N 353 THR HG21 H N N 354 THR HG22 H N N 355 THR HG23 H N N 356 THR HXT H N N 357 TRP N N N N 358 TRP CA C N S 359 TRP C C N N 360 TRP O O N N 361 TRP CB C N N 362 TRP CG C Y N 363 TRP CD1 C Y N 364 TRP CD2 C Y N 365 TRP NE1 N Y N 366 TRP CE2 C Y N 367 TRP CE3 C Y N 368 TRP CZ2 C Y N 369 TRP CZ3 C Y N 370 TRP CH2 C Y N 371 TRP OXT O N N 372 TRP H H N N 373 TRP H2 H N N 374 TRP HA H N N 375 TRP HB2 H N N 376 TRP HB3 H N N 377 TRP HD1 H N N 378 TRP HE1 H N N 379 TRP HE3 H N N 380 TRP HZ2 H N N 381 TRP HZ3 H N N 382 TRP HH2 H N N 383 TRP HXT H N N 384 TYR N N N N 385 TYR CA C N S 386 TYR C C N N 387 TYR O O N N 388 TYR CB C N N 389 TYR CG C Y N 390 TYR CD1 C Y N 391 TYR CD2 C Y N 392 TYR CE1 C Y N 393 TYR CE2 C Y N 394 TYR CZ C Y N 395 TYR OH O N N 396 TYR OXT O N N 397 TYR H H N N 398 TYR H2 H N N 399 TYR HA H N N 400 TYR HB2 H N N 401 TYR HB3 H N N 402 TYR HD1 H N N 403 TYR HD2 H N N 404 TYR HE1 H N N 405 TYR HE2 H N N 406 TYR HH H N N 407 TYR HXT H N N 408 VAL N N N N 409 VAL CA C N S 410 VAL C C N N 411 VAL O O N N 412 VAL CB C N N 413 VAL CG1 C N N 414 VAL CG2 C N N 415 VAL OXT O N N 416 VAL H H N N 417 VAL H2 H N N 418 VAL HA H N N 419 VAL HB H N N 420 VAL HG11 H N N 421 VAL HG12 H N N 422 VAL HG13 H N N 423 VAL HG21 H N N 424 VAL HG22 H N N 425 VAL HG23 H N N 426 VAL HXT H N N 427 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 IKT C1 O1 doub N N 152 IKT C1 O2 sing N N 153 IKT C1 C2 sing N N 154 IKT O2 HO2 sing N N 155 IKT C2 C3 sing N N 156 IKT C2 H21 sing N N 157 IKT C2 H22 sing N N 158 IKT C3 C4 sing N N 159 IKT C3 "C1'" sing N N 160 IKT C3 H3 sing N N 161 IKT C4 C5 sing N N 162 IKT C4 H41 sing N N 163 IKT C4 H42 sing N N 164 IKT C5 C6 sing N N 165 IKT C5 H51 sing N N 166 IKT C5 H52 sing N N 167 IKT C6 C7 sing N N 168 IKT C6 H61 sing N N 169 IKT C6 H62 sing N N 170 IKT C7 C8 sing N N 171 IKT C7 H71 sing N N 172 IKT C7 H72 sing N N 173 IKT C8 C9 sing N N 174 IKT C8 H81 sing N N 175 IKT C8 H82 sing N N 176 IKT C9 O3 doub N N 177 IKT C9 O4 sing N N 178 IKT O4 HO4 sing N N 179 IKT "C1'" "C2'" sing N N 180 IKT "C1'" "N1'" sing N N 181 IKT "C1'" "H1'" sing N N 182 IKT "C2'" "H2'1" sing N N 183 IKT "C2'" "H2'2" sing N N 184 IKT "C2'" "H2'3" sing N N 185 IKT "N1'" HN11 sing N N 186 IKT "N1'" HN12 sing N N 187 ILE N CA sing N N 188 ILE N H sing N N 189 ILE N H2 sing N N 190 ILE CA C sing N N 191 ILE CA CB sing N N 192 ILE CA HA sing N N 193 ILE C O doub N N 194 ILE C OXT sing N N 195 ILE CB CG1 sing N N 196 ILE CB CG2 sing N N 197 ILE CB HB sing N N 198 ILE CG1 CD1 sing N N 199 ILE CG1 HG12 sing N N 200 ILE CG1 HG13 sing N N 201 ILE CG2 HG21 sing N N 202 ILE CG2 HG22 sing N N 203 ILE CG2 HG23 sing N N 204 ILE CD1 HD11 sing N N 205 ILE CD1 HD12 sing N N 206 ILE CD1 HD13 sing N N 207 ILE OXT HXT sing N N 208 LEU N CA sing N N 209 LEU N H sing N N 210 LEU N H2 sing N N 211 LEU CA C sing N N 212 LEU CA CB sing N N 213 LEU CA HA sing N N 214 LEU C O doub N N 215 LEU C OXT sing N N 216 LEU CB CG sing N N 217 LEU CB HB2 sing N N 218 LEU CB HB3 sing N N 219 LEU CG CD1 sing N N 220 LEU CG CD2 sing N N 221 LEU CG HG sing N N 222 LEU CD1 HD11 sing N N 223 LEU CD1 HD12 sing N N 224 LEU CD1 HD13 sing N N 225 LEU CD2 HD21 sing N N 226 LEU CD2 HD22 sing N N 227 LEU CD2 HD23 sing N N 228 LEU OXT HXT sing N N 229 LYS N CA sing N N 230 LYS N H sing N N 231 LYS N H2 sing N N 232 LYS CA C sing N N 233 LYS CA CB sing N N 234 LYS CA HA sing N N 235 LYS C O doub N N 236 LYS C OXT sing N N 237 LYS CB CG sing N N 238 LYS CB HB2 sing N N 239 LYS CB HB3 sing N N 240 LYS CG CD sing N N 241 LYS CG HG2 sing N N 242 LYS CG HG3 sing N N 243 LYS CD CE sing N N 244 LYS CD HD2 sing N N 245 LYS CD HD3 sing N N 246 LYS CE NZ sing N N 247 LYS CE HE2 sing N N 248 LYS CE HE3 sing N N 249 LYS NZ HZ1 sing N N 250 LYS NZ HZ2 sing N N 251 LYS NZ HZ3 sing N N 252 LYS OXT HXT sing N N 253 MET N CA sing N N 254 MET N H sing N N 255 MET N H2 sing N N 256 MET CA C sing N N 257 MET CA CB sing N N 258 MET CA HA sing N N 259 MET C O doub N N 260 MET C OXT sing N N 261 MET CB CG sing N N 262 MET CB HB2 sing N N 263 MET CB HB3 sing N N 264 MET CG SD sing N N 265 MET CG HG2 sing N N 266 MET CG HG3 sing N N 267 MET SD CE sing N N 268 MET CE HE1 sing N N 269 MET CE HE2 sing N N 270 MET CE HE3 sing N N 271 MET OXT HXT sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TRP N CA sing N N 342 TRP N H sing N N 343 TRP N H2 sing N N 344 TRP CA C sing N N 345 TRP CA CB sing N N 346 TRP CA HA sing N N 347 TRP C O doub N N 348 TRP C OXT sing N N 349 TRP CB CG sing N N 350 TRP CB HB2 sing N N 351 TRP CB HB3 sing N N 352 TRP CG CD1 doub Y N 353 TRP CG CD2 sing Y N 354 TRP CD1 NE1 sing Y N 355 TRP CD1 HD1 sing N N 356 TRP CD2 CE2 doub Y N 357 TRP CD2 CE3 sing Y N 358 TRP NE1 CE2 sing Y N 359 TRP NE1 HE1 sing N N 360 TRP CE2 CZ2 sing Y N 361 TRP CE3 CZ3 doub Y N 362 TRP CE3 HE3 sing N N 363 TRP CZ2 CH2 doub Y N 364 TRP CZ2 HZ2 sing N N 365 TRP CZ3 CH2 sing Y N 366 TRP CZ3 HZ3 sing N N 367 TRP CH2 HH2 sing N N 368 TRP OXT HXT sing N N 369 TYR N CA sing N N 370 TYR N H sing N N 371 TYR N H2 sing N N 372 TYR CA C sing N N 373 TYR CA CB sing N N 374 TYR CA HA sing N N 375 TYR C O doub N N 376 TYR C OXT sing N N 377 TYR CB CG sing N N 378 TYR CB HB2 sing N N 379 TYR CB HB3 sing N N 380 TYR CG CD1 doub Y N 381 TYR CG CD2 sing Y N 382 TYR CD1 CE1 sing Y N 383 TYR CD1 HD1 sing N N 384 TYR CD2 CE2 doub Y N 385 TYR CD2 HD2 sing N N 386 TYR CE1 CZ doub Y N 387 TYR CE1 HE1 sing N N 388 TYR CE2 CZ sing Y N 389 TYR CE2 HE2 sing N N 390 TYR CZ OH sing N N 391 TYR OH HH sing N N 392 TYR OXT HXT sing N N 393 VAL N CA sing N N 394 VAL N H sing N N 395 VAL N H2 sing N N 396 VAL CA C sing N N 397 VAL CA CB sing N N 398 VAL CA HA sing N N 399 VAL C O doub N N 400 VAL C OXT sing N N 401 VAL CB CG1 sing N N 402 VAL CB CG2 sing N N 403 VAL CB HB sing N N 404 VAL CG1 HG11 sing N N 405 VAL CG1 HG12 sing N N 406 VAL CG1 HG13 sing N N 407 VAL CG2 HG21 sing N N 408 VAL CG2 HG22 sing N N 409 VAL CG2 HG23 sing N N 410 VAL OXT HXT sing N N 411 # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-(1-AMINOETHYL)NONANEDIOIC ACID' IKT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6IR4 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #