HEADER SIGNALING PROTEIN 26-NOV-18 6ITS TITLE THE CITRATE-BOUND TRIMER OF CHEMORECEPTOR MCP2201 LIGAND BINDING TITLE 2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYL-ACCEPTING CHEMOTAXIS SENSORY TRANSDUCER; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COMAMONAS TESTOSTERONI (STRAIN CNB-2); SOURCE 3 ORGANISM_TAXID: 688245; SOURCE 4 STRAIN: CNB-2; SOURCE 5 GENE: CTCNB1_2201; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS METHYL-ACCEPTING CHEMOTAXIS PROTEIN, FOUR HELIX BUNDLE, DICARBOXYLIC KEYWDS 2 ORGANIC ACID BINDING, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.HONG,D.F.LI REVDAT 4 22-NOV-23 6ITS 1 REMARK REVDAT 3 25-SEP-19 6ITS 1 JRNL REVDAT 2 10-JUL-19 6ITS 1 JRNL REVDAT 1 26-DEC-18 6ITS 0 JRNL AUTH Y.HONG,Z.HUANG,L.GUO,B.NI,C.Y.JIANG,X.J.LI,Y.J.HOU,W.S.YANG, JRNL AUTH 2 D.C.WANG,I.B.ZHULIN,S.J.LIU,D.F.LI JRNL TITL THE LIGAND-BINDING DOMAIN OF A CHEMORECEPTOR FROM COMAMONAS JRNL TITL 2 TESTOSTERONI HAS A PREVIOUSLY UNKNOWN HOMOTRIMERIC JRNL TITL 3 STRUCTURE. JRNL REF MOL.MICROBIOL. V. 112 906 2019 JRNL REFN ESSN 1365-2958 JRNL PMID 31177588 JRNL DOI 10.1111/MMI.14326 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 10730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0545 - 4.9988 0.99 1293 149 0.1923 0.2554 REMARK 3 2 4.9988 - 3.9687 0.99 1316 143 0.1511 0.2044 REMARK 3 3 3.9687 - 3.4673 0.99 1275 144 0.1671 0.2341 REMARK 3 4 3.4673 - 3.1504 0.96 1243 145 0.1930 0.2284 REMARK 3 5 3.1504 - 2.9246 0.90 1171 130 0.2072 0.3036 REMARK 3 6 2.9246 - 2.7522 0.88 1136 128 0.2085 0.2738 REMARK 3 7 2.7522 - 2.6144 0.83 1100 121 0.2125 0.2621 REMARK 3 8 2.6144 - 2.5006 0.85 1111 125 0.2371 0.2866 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2273 REMARK 3 ANGLE : 1.019 3077 REMARK 3 CHIRALITY : 0.048 375 REMARK 3 PLANARITY : 0.007 397 REMARK 3 DIHEDRAL : 27.154 865 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5018 23.4907 -35.4238 REMARK 3 T TENSOR REMARK 3 T11: 0.3673 T22: 0.5669 REMARK 3 T33: 0.5964 T12: -0.0524 REMARK 3 T13: 0.0189 T23: -0.0543 REMARK 3 L TENSOR REMARK 3 L11: 1.5722 L22: 3.1715 REMARK 3 L33: 5.2571 L12: 0.4724 REMARK 3 L13: 1.7326 L23: 2.8109 REMARK 3 S TENSOR REMARK 3 S11: -0.2877 S12: 0.6999 S13: -0.0189 REMARK 3 S21: -0.6119 S22: 0.3388 S23: -0.1342 REMARK 3 S31: -0.2608 S32: 1.4349 S33: -0.2798 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3123 34.4101 -26.4909 REMARK 3 T TENSOR REMARK 3 T11: 0.3561 T22: 0.2888 REMARK 3 T33: 0.5746 T12: -0.0125 REMARK 3 T13: -0.0563 T23: 0.0955 REMARK 3 L TENSOR REMARK 3 L11: 3.4410 L22: 2.4540 REMARK 3 L33: 8.2491 L12: -0.1525 REMARK 3 L13: 1.0493 L23: 0.4986 REMARK 3 S TENSOR REMARK 3 S11: -0.3808 S12: 0.2778 S13: 0.8961 REMARK 3 S21: -0.4862 S22: -0.1872 S23: -0.3383 REMARK 3 S31: -0.4898 S32: 0.2088 S33: 0.5005 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8209 33.5397 -29.5805 REMARK 3 T TENSOR REMARK 3 T11: 0.3716 T22: 0.3361 REMARK 3 T33: 0.5860 T12: -0.0165 REMARK 3 T13: -0.0740 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.4994 L22: 2.2766 REMARK 3 L33: 6.3859 L12: 0.1969 REMARK 3 L13: 3.0706 L23: 2.0177 REMARK 3 S TENSOR REMARK 3 S11: -0.7202 S12: 0.1036 S13: 1.1585 REMARK 3 S21: -0.5168 S22: -0.2870 S23: 0.5073 REMARK 3 S31: -1.0541 S32: -0.0456 S33: 0.5838 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4125 34.1076 -9.8192 REMARK 3 T TENSOR REMARK 3 T11: 0.3579 T22: 0.5767 REMARK 3 T33: 0.5873 T12: 0.0813 REMARK 3 T13: -0.0576 T23: -0.1777 REMARK 3 L TENSOR REMARK 3 L11: 7.3973 L22: 5.3472 REMARK 3 L33: 9.4997 L12: 4.1073 REMARK 3 L13: 6.0261 L23: 4.9682 REMARK 3 S TENSOR REMARK 3 S11: -0.3032 S12: -0.6097 S13: 0.5416 REMARK 3 S21: 0.8153 S22: -0.0958 S23: 0.4248 REMARK 3 S31: -0.0507 S32: -0.8748 S33: 0.7546 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.8850 18.9735 -40.1986 REMARK 3 T TENSOR REMARK 3 T11: 0.3937 T22: 0.2897 REMARK 3 T33: 0.3178 T12: 0.0668 REMARK 3 T13: 0.0626 T23: 0.0786 REMARK 3 L TENSOR REMARK 3 L11: 4.2518 L22: 5.2582 REMARK 3 L33: 7.1201 L12: 0.0023 REMARK 3 L13: 1.0430 L23: 2.3124 REMARK 3 S TENSOR REMARK 3 S11: 0.2230 S12: 0.6178 S13: -0.1340 REMARK 3 S21: -0.9076 S22: -0.3027 S23: -0.2517 REMARK 3 S31: 0.5327 S32: -0.1249 S33: 0.0819 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6726 40.1544 50.5443 REMARK 3 T TENSOR REMARK 3 T11: 1.2370 T22: 1.3324 REMARK 3 T33: 0.9778 T12: -0.0763 REMARK 3 T13: -0.0318 T23: 0.1342 REMARK 3 L TENSOR REMARK 3 L11: 1.3529 L22: 3.0410 REMARK 3 L33: 4.2410 L12: -1.2509 REMARK 3 L13: -2.2017 L23: 3.1657 REMARK 3 S TENSOR REMARK 3 S11: 1.6215 S12: 0.1242 S13: -0.9098 REMARK 3 S21: 0.1548 S22: 0.0810 S23: 0.2846 REMARK 3 S31: -0.3256 S32: -0.8944 S33: -0.6615 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 60 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9448 39.4235 26.1646 REMARK 3 T TENSOR REMARK 3 T11: 0.3827 T22: 0.2858 REMARK 3 T33: 0.4839 T12: 0.0535 REMARK 3 T13: -0.0306 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 1.3159 L22: 2.0173 REMARK 3 L33: 8.2144 L12: 1.9955 REMARK 3 L13: 3.3921 L23: 4.9954 REMARK 3 S TENSOR REMARK 3 S11: 0.2968 S12: 0.0170 S13: -0.3677 REMARK 3 S21: 0.7374 S22: 0.0115 S23: -0.1220 REMARK 3 S31: 1.5903 S32: 0.9716 S33: -0.5925 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0010 31.8322 23.2021 REMARK 3 T TENSOR REMARK 3 T11: 0.3204 T22: 0.2323 REMARK 3 T33: 0.4473 T12: -0.0348 REMARK 3 T13: 0.0160 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 2.9234 L22: 5.0715 REMARK 3 L33: 3.1268 L12: 0.4276 REMARK 3 L13: 1.8389 L23: 3.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.1628 S12: -0.2070 S13: -0.6117 REMARK 3 S21: 0.4577 S22: -0.3861 S23: 0.1930 REMARK 3 S31: 0.7149 S32: -0.1342 S33: 0.6575 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5300 43.0497 25.6673 REMARK 3 T TENSOR REMARK 3 T11: 0.3716 T22: 0.2981 REMARK 3 T33: 0.4818 T12: 0.0210 REMARK 3 T13: 0.0174 T23: -0.0659 REMARK 3 L TENSOR REMARK 3 L11: 2.9597 L22: 7.1239 REMARK 3 L33: 7.0694 L12: 3.2692 REMARK 3 L13: 2.4992 L23: 8.2965 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: -0.2721 S13: -0.0313 REMARK 3 S21: 0.5360 S22: -0.5945 S23: 0.7082 REMARK 3 S31: 0.6345 S32: -1.0651 S33: 0.7476 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 151 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7765 40.2332 5.7200 REMARK 3 T TENSOR REMARK 3 T11: 0.4414 T22: 0.4482 REMARK 3 T33: 0.5192 T12: 0.1067 REMARK 3 T13: -0.1364 T23: -0.1653 REMARK 3 L TENSOR REMARK 3 L11: 5.8468 L22: 8.3280 REMARK 3 L33: 9.7313 L12: 2.1063 REMARK 3 L13: 3.4283 L23: 4.2911 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.7465 S13: -0.5174 REMARK 3 S21: -1.0627 S22: -0.8406 S23: 1.0750 REMARK 3 S31: -0.3040 S32: -0.9858 S33: 0.8150 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 165 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4142 49.1236 36.2702 REMARK 3 T TENSOR REMARK 3 T11: 0.4014 T22: 0.4222 REMARK 3 T33: 0.2969 T12: -0.0057 REMARK 3 T13: 0.0373 T23: 0.0691 REMARK 3 L TENSOR REMARK 3 L11: 5.0149 L22: 4.5115 REMARK 3 L33: 6.5659 L12: 0.2033 REMARK 3 L13: 2.5934 L23: 2.1649 REMARK 3 S TENSOR REMARK 3 S11: -0.2759 S12: -0.7384 S13: 0.1246 REMARK 3 S21: 0.7404 S22: -0.1118 S23: 0.0411 REMARK 3 S31: -0.1628 S32: 0.5102 S33: 0.2452 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ITS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97907 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11135 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.55700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5XUB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 4.4, 14% REMARK 280 PEG400, 13% ETHYLENE GLYCOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.43000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.10467 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.38400 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 24.43000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 14.10467 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 125.38400 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 24.43000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 14.10467 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 125.38400 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 28.20933 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 250.76800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 28.20933 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 250.76800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 28.20933 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 250.76800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 24.43000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 42.31400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -24.43000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 42.31400 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 24.43000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 42.31400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -24.43000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 42.31400 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 411 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 424 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 426 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 414 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 425 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 428 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 430 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 HIS A 40 REMARK 465 HIS A 41 REMARK 465 HIS A 42 REMARK 465 HIS A 43 REMARK 465 HIS A 44 REMARK 465 HIS A 45 REMARK 465 GLN A 46 REMARK 465 LEU A 47 REMARK 465 HIS A 48 REMARK 465 SER A 49 REMARK 465 VAL A 50 REMARK 465 GLY A 51 REMARK 465 LYS A 52 REMARK 465 SER A 200 REMARK 465 SER A 201 REMARK 465 ARG A 202 REMARK 465 THR A 203 REMARK 465 MET B 39 REMARK 465 HIS B 40 REMARK 465 HIS B 41 REMARK 465 HIS B 42 REMARK 465 HIS B 43 REMARK 465 HIS B 44 REMARK 465 HIS B 45 REMARK 465 GLN B 46 REMARK 465 LEU B 47 REMARK 465 HIS B 48 REMARK 465 SER B 49 REMARK 465 VAL B 50 REMARK 465 GLY B 51 REMARK 465 LYS B 52 REMARK 465 ALA B 53 REMARK 465 SER B 200 REMARK 465 SER B 201 REMARK 465 ARG B 202 REMARK 465 THR B 203 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 104 O6 CIT B 301 1.95 REMARK 500 OD2 ASP B 100 O HOH B 401 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 153 73.57 -110.91 REMARK 500 GLN B 55 12.74 82.48 REMARK 500 MET B 153 72.19 -113.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5XUA RELATED DB: PDB REMARK 900 THE LIGAND-FREE FORM REMARK 900 RELATED ID: 5XUB RELATED DB: PDB REMARK 900 ANOTHER CITRATE-BOUND FORM DBREF 6ITS A 46 203 UNP D0IVL9 D0IVL9_COMT2 46 203 DBREF 6ITS B 46 203 UNP D0IVL9 D0IVL9_COMT2 46 203 SEQADV 6ITS MET A 39 UNP D0IVL9 INITIATING METHIONINE SEQADV 6ITS HIS A 40 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS A 41 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS A 42 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS A 43 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS A 44 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS A 45 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS MET B 39 UNP D0IVL9 INITIATING METHIONINE SEQADV 6ITS HIS B 40 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS B 41 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS B 42 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS B 43 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS B 44 UNP D0IVL9 EXPRESSION TAG SEQADV 6ITS HIS B 45 UNP D0IVL9 EXPRESSION TAG SEQRES 1 A 165 MET HIS HIS HIS HIS HIS HIS GLN LEU HIS SER VAL GLY SEQRES 2 A 165 LYS ALA THR GLN GLN MET MET GLN GLU PRO LEU THR LYS SEQRES 3 A 165 GLU ARG LEU ILE SER ASP TRP ASN SER ASN VAL SER VAL SEQRES 4 A 165 ALA VAL ALA ARG THR THR ALA ILE ALA LYS SER SER ASP SEQRES 5 A 165 ALA SER LEU VAL GLN PHE LEU ALA ALA ASP ALA ALA ALA SEQRES 6 A 165 THR THR LYS SER THR ALA ASN VAL LEU LYS GLN ILE GLU SEQRES 7 A 165 PRO LEU ILE THR GLN PRO ALA GLU ARG GLU ILE LEU ASP SEQRES 8 A 165 LYS ILE MET GLN VAL ARG LYS THR TYR ILE ALA SER ARG SEQRES 9 A 165 ASP LYS VAL SER GLN LEU LYS ALA ASP GLY MET ALA GLU SEQRES 10 A 165 GLU ALA GLU SER THR LEU ILE ASN SER TYR VAL PRO ALA SEQRES 11 A 165 ALA GLN GLY TYR LEU LYS LEU LEU GLY GLU LEU LEU ASN SEQRES 12 A 165 LEU GLN ARG ALA SER LEU ASP ALA LYS ALA ALA GLU VAL SEQRES 13 A 165 GLU GLN ILE GLU SER SER SER ARG THR SEQRES 1 B 165 MET HIS HIS HIS HIS HIS HIS GLN LEU HIS SER VAL GLY SEQRES 2 B 165 LYS ALA THR GLN GLN MET MET GLN GLU PRO LEU THR LYS SEQRES 3 B 165 GLU ARG LEU ILE SER ASP TRP ASN SER ASN VAL SER VAL SEQRES 4 B 165 ALA VAL ALA ARG THR THR ALA ILE ALA LYS SER SER ASP SEQRES 5 B 165 ALA SER LEU VAL GLN PHE LEU ALA ALA ASP ALA ALA ALA SEQRES 6 B 165 THR THR LYS SER THR ALA ASN VAL LEU LYS GLN ILE GLU SEQRES 7 B 165 PRO LEU ILE THR GLN PRO ALA GLU ARG GLU ILE LEU ASP SEQRES 8 B 165 LYS ILE MET GLN VAL ARG LYS THR TYR ILE ALA SER ARG SEQRES 9 B 165 ASP LYS VAL SER GLN LEU LYS ALA ASP GLY MET ALA GLU SEQRES 10 B 165 GLU ALA GLU SER THR LEU ILE ASN SER TYR VAL PRO ALA SEQRES 11 B 165 ALA GLN GLY TYR LEU LYS LEU LEU GLY GLU LEU LEU ASN SEQRES 12 B 165 LEU GLN ARG ALA SER LEU ASP ALA LYS ALA ALA GLU VAL SEQRES 13 B 165 GLU GLN ILE GLU SER SER SER ARG THR HET CIT A 301 18 HET CIT B 301 18 HETNAM CIT CITRIC ACID FORMUL 3 CIT 2(C6 H8 O7) FORMUL 5 HOH *60(H2 O) HELIX 1 AA1 GLN A 55 MET A 57 5 3 HELIX 2 AA2 MET A 58 SER A 88 1 31 HELIX 3 AA3 ASP A 90 GLU A 116 1 27 HELIX 4 AA4 GLN A 121 ASP A 151 1 31 HELIX 5 AA5 MET A 153 SER A 164 1 12 HELIX 6 AA6 SER A 164 SER A 199 1 36 HELIX 7 AA7 GLN B 59 SER B 88 1 30 HELIX 8 AA8 ASP B 90 GLU B 116 1 27 HELIX 9 AA9 PRO B 117 ILE B 119 5 3 HELIX 10 AB1 GLN B 121 ASP B 151 1 31 HELIX 11 AB2 MET B 153 SER B 164 1 12 HELIX 12 AB3 SER B 164 GLN B 196 1 33 SITE 1 AC1 10 ASN A 74 ALA A 78 ARG A 81 THR A 104 SITE 2 AC1 10 THR A 108 ARG A 135 TYR A 138 ILE A 139 SITE 3 AC1 10 ARG A 142 TYR A 172 SITE 1 AC2 10 ASN B 74 ALA B 78 ARG B 81 THR B 104 SITE 2 AC2 10 THR B 108 ARG B 135 TYR B 138 ILE B 139 SITE 3 AC2 10 ARG B 142 TYR B 172 CRYST1 48.860 48.860 376.152 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020467 0.011816 0.000000 0.00000 SCALE2 0.000000 0.023633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002658 0.00000