HEADER OXIDOREDUCTASE 27-NOV-18 6ITZ TITLE PEROXIREDOXIN FROM THERMOCOCCUS KODAKARAENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXIREDOXIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: THIOREDOXIN PEROXIDASE; COMPND 5 EC: 1.11.1.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS KOD1; SOURCE 3 ORGANISM_TAXID: 69014; SOURCE 4 STRAIN: KOD1; SOURCE 5 GENE: TK0537; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROGEN PEROXIDE, OXIDOREDUCTASE, DODECAMER EXPDTA X-RAY DIFFRACTION AUTHOR T.NAKAMURA,T.HIMIYAMA REVDAT 2 17-JUL-19 6ITZ 1 JRNL REVDAT 1 06-MAR-19 6ITZ 0 JRNL AUTH T.HIMIYAMA,M.OSHIMA,K.UEGAKI,T.NAKAMURA JRNL TITL DISTINCT MOLECULAR ASSEMBLY OF HOMOLOGOUS PEROXIREDOXINS JRNL TITL 2 FROM PYROCOCCUS HORIKOSHII AND THERMOCOCCUS KODAKARAENSIS. JRNL REF J.BIOCHEM. V. 166 89 2019 JRNL REFN ISSN 0021-924X JRNL PMID 30796432 JRNL DOI 10.1093/JB/MVZ013 REMARK 2 REMARK 2 RESOLUTION. 2.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 577 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 829 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.3850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3430 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : -0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.453 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.352 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.024 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.882 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.812 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3523 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4780 ; 1.569 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 424 ; 6.877 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;41.289 ;24.430 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;21.041 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.493 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 518 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2654 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2124 ; 0.499 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3452 ; 0.992 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1399 ; 1.447 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1328 ; 2.557 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ITZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12022 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE-HCL (PH 7.2), 0.2M REMARK 280 MGCL2, AND 16% PEG400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 48030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 90720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -273.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 216 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 GLU B 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 58 OD2 REMARK 470 ASP B 58 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 121 O ALA A 140 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 61 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 4 170.58 -48.19 REMARK 500 ALA A 40 137.72 -172.83 REMARK 500 LEU A 70 124.41 -170.50 REMARK 500 VAL A 72 21.08 -79.68 REMARK 500 ARG A 102 21.27 45.86 REMARK 500 SER A 114 105.71 -42.44 REMARK 500 ALA A 120 -122.82 -98.59 REMARK 500 HIS A 168 127.93 -36.73 REMARK 500 ILE A 176 18.89 -153.00 REMARK 500 LYS A 200 13.38 102.63 REMARK 500 ILE B 4 160.44 -43.52 REMARK 500 ASP B 41 157.71 -46.69 REMARK 500 PRO B 44 -73.26 -59.63 REMARK 500 ARG B 102 -1.26 63.43 REMARK 500 ALA B 120 -129.67 -108.57 REMARK 500 HIS B 168 130.15 -35.67 REMARK 500 LYS B 200 -8.00 83.67 REMARK 500 REMARK 500 REMARK: NULL DBREF 6ITZ A 1 216 UNP Q5JF30 TDXH_THEKO 1 216 DBREF 6ITZ B 1 216 UNP Q5JF30 TDXH_THEKO 1 216 SEQRES 1 A 216 MET VAL VAL ILE GLY GLU LYS PHE PRO GLU VAL GLU VAL SEQRES 2 A 216 LYS THR THR HIS GLY VAL ILE LYS LEU PRO ASP TYR PHE SEQRES 3 A 216 ALA GLU GLN GLY LYS TRP PHE VAL LEU PHE SER HIS PRO SEQRES 4 A 216 ALA ASP PHE THR PRO VAL CYS THR THR GLU PHE TYR ALA SEQRES 5 A 216 MET GLN LYS ARG VAL ASP GLN PHE ARG GLU LEU GLY VAL SEQRES 6 A 216 GLU PRO ILE GLY LEU SER VAL ASP GLN VAL PHE SER HIS SEQRES 7 A 216 ILE LYS TRP MET GLU TRP ILE LYS GLU ASN LEU GLY GLU SEQRES 8 A 216 GLU ILE THR PHE PRO VAL ILE ALA ASP ASP ARG GLY GLU SEQRES 9 A 216 LEU ALA ASP LYS LEU GLY MET ILE PRO SER GLY ALA THR SEQRES 10 A 216 ILE THR ALA ARG ALA VAL PHE ILE VAL ASP ASP LYS GLY SEQRES 11 A 216 ILE ILE ARG ALA ILE VAL TYR TYR PRO ALA GLU VAL GLY SEQRES 12 A 216 ARG ASP TRP ASP GLU ILE LEU ARG LEU VAL LYS ALA LEU SEQRES 13 A 216 LYS VAL SER ASP GLU LYS GLY VAL ALA LEU PRO HIS LYS SEQRES 14 A 216 TRP PRO ASN ASN GLU LEU ILE GLY ASP LYS ALA ILE VAL SEQRES 15 A 216 PRO PRO ALA SER THR VAL ASP GLU VAL LYS GLN ARG GLU SEQRES 16 A 216 GLU ALA LYS ALA LYS GLY GLU ILE GLU CYS TYR ASP TRP SEQRES 17 A 216 TRP PHE CYS TYR LYS LYS LEU GLU SEQRES 1 B 216 MET VAL VAL ILE GLY GLU LYS PHE PRO GLU VAL GLU VAL SEQRES 2 B 216 LYS THR THR HIS GLY VAL ILE LYS LEU PRO ASP TYR PHE SEQRES 3 B 216 ALA GLU GLN GLY LYS TRP PHE VAL LEU PHE SER HIS PRO SEQRES 4 B 216 ALA ASP PHE THR PRO VAL CYS THR THR GLU PHE TYR ALA SEQRES 5 B 216 MET GLN LYS ARG VAL ASP GLN PHE ARG GLU LEU GLY VAL SEQRES 6 B 216 GLU PRO ILE GLY LEU SER VAL ASP GLN VAL PHE SER HIS SEQRES 7 B 216 ILE LYS TRP MET GLU TRP ILE LYS GLU ASN LEU GLY GLU SEQRES 8 B 216 GLU ILE THR PHE PRO VAL ILE ALA ASP ASP ARG GLY GLU SEQRES 9 B 216 LEU ALA ASP LYS LEU GLY MET ILE PRO SER GLY ALA THR SEQRES 10 B 216 ILE THR ALA ARG ALA VAL PHE ILE VAL ASP ASP LYS GLY SEQRES 11 B 216 ILE ILE ARG ALA ILE VAL TYR TYR PRO ALA GLU VAL GLY SEQRES 12 B 216 ARG ASP TRP ASP GLU ILE LEU ARG LEU VAL LYS ALA LEU SEQRES 13 B 216 LYS VAL SER ASP GLU LYS GLY VAL ALA LEU PRO HIS LYS SEQRES 14 B 216 TRP PRO ASN ASN GLU LEU ILE GLY ASP LYS ALA ILE VAL SEQRES 15 B 216 PRO PRO ALA SER THR VAL ASP GLU VAL LYS GLN ARG GLU SEQRES 16 B 216 GLU ALA LYS ALA LYS GLY GLU ILE GLU CYS TYR ASP TRP SEQRES 17 B 216 TRP PHE CYS TYR LYS LYS LEU GLU HELIX 1 AA1 PRO A 23 GLY A 30 1 8 HELIX 2 AA2 THR A 43 LYS A 55 1 13 HELIX 3 AA3 ARG A 56 GLU A 62 1 7 HELIX 4 AA4 GLN A 74 GLY A 90 1 17 HELIX 5 AA5 GLY A 103 LEU A 109 1 7 HELIX 6 AA6 ASP A 145 GLY A 163 1 19 HELIX 7 AA7 THR A 187 ALA A 199 1 13 HELIX 8 AA8 PRO B 23 GLU B 28 1 6 HELIX 9 AA9 THR B 43 LEU B 63 1 21 HELIX 10 AB1 GLN B 74 LEU B 89 1 16 HELIX 11 AB2 GLY B 103 LEU B 109 1 7 HELIX 12 AB3 ASP B 145 GLY B 163 1 19 HELIX 13 AB4 THR B 187 ALA B 199 1 13 SHEET 1 AA1 2 VAL A 11 LYS A 14 0 SHEET 2 AA1 2 VAL A 19 LEU A 22 -1 O LEU A 22 N VAL A 11 SHEET 1 AA210 VAL A 97 ALA A 99 0 SHEET 2 AA210 VAL A 65 SER A 71 1 N GLY A 69 O ILE A 98 SHEET 3 AA210 TRP A 32 SER A 37 1 N VAL A 34 O GLU A 66 SHEET 4 AA210 ARG A 121 VAL A 126 -1 O PHE A 124 N LEU A 35 SHEET 5 AA210 ILE A 132 TYR A 138 -1 O ARG A 133 N ILE A 125 SHEET 6 AA210 ILE B 132 TYR B 138 -1 O ILE B 135 N TYR A 137 SHEET 7 AA210 ARG B 121 VAL B 126 -1 N ILE B 125 O ARG B 133 SHEET 8 AA210 TRP B 32 SER B 37 -1 N LEU B 35 O PHE B 124 SHEET 9 AA210 VAL B 65 SER B 71 1 O GLU B 66 N TRP B 32 SHEET 10 AA210 VAL B 97 ALA B 99 1 O ILE B 98 N SER B 71 SHEET 1 AA3 3 ALA A 180 VAL A 182 0 SHEET 2 AA3 3 PHE A 210 LYS A 213 -1 O CYS A 211 N VAL A 182 SHEET 3 AA3 3 GLU A 204 ASP A 207 -1 N TYR A 206 O PHE A 210 SHEET 1 AA4 2 VAL B 11 LYS B 14 0 SHEET 2 AA4 2 VAL B 19 LEU B 22 -1 O ILE B 20 N VAL B 13 SHEET 1 AA5 3 ALA B 180 VAL B 182 0 SHEET 2 AA5 3 CYS B 211 LYS B 213 -1 O CYS B 211 N VAL B 182 SHEET 3 AA5 3 GLU B 204 CYS B 205 -1 N GLU B 204 O TYR B 212 SSBOND 1 CYS B 205 CYS B 211 1555 1555 2.10 CISPEP 1 LEU A 22 PRO A 23 0 2.29 CISPEP 2 TRP A 170 PRO A 171 0 5.05 CISPEP 3 LEU B 22 PRO B 23 0 -6.33 CISPEP 4 TRP B 170 PRO B 171 0 2.95 CRYST1 142.183 142.183 49.146 90.00 90.00 120.00 P 6 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007033 0.004061 0.000000 0.00000 SCALE2 0.000000 0.008121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020348 0.00000