HEADER OXIDOREDUCTASE 29-NOV-18 6IUQ TITLE CRYSTAL STRUCTURE AND EXPRESSION PATTERNS OF PROLYL 4-HYDROXYLASES TITLE 2 FROM PHYTOPHTHORA CAPSICI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLYL 4-HYDROXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: EACH MONOMER CONSISITS OF AN IRON ION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHYTOPHTHORA CAPSICI LT1534; SOURCE 3 ORGANISM_TAXID: 763924; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROXYLASE, IRON, DSBH CORE FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR W.W.SONG,X.G.ZHANG REVDAT 2 16-OCT-24 6IUQ 1 REMARK REVDAT 1 12-DEC-18 6IUQ 0 JRNL AUTH W.W.SONG,X.G.ZHANG JRNL TITL CRYSTAL STRUCTURE AND EXPRESSION PATTERNS OF PROLYL JRNL TITL 2 4-HYDROXYLASES FROM PHYTOPHTHORA CAPSICI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 36918 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 6.3700 - 5.5181 0.98 2857 159 0.2090 0.2355 REMARK 3 2 5.5181 - 4.3812 0.98 2807 171 0.1624 0.1821 REMARK 3 3 4.3812 - 3.8277 0.99 2894 136 0.1645 0.2174 REMARK 3 4 3.8277 - 3.4779 0.99 2872 160 0.1711 0.1935 REMARK 3 5 3.4779 - 3.2287 0.98 2886 138 0.1751 0.1967 REMARK 3 6 3.2287 - 3.0384 0.97 2812 150 0.1894 0.2151 REMARK 3 7 3.0384 - 2.8863 0.98 2868 146 0.2071 0.2482 REMARK 3 8 2.8863 - 2.7607 0.98 2865 136 0.1948 0.2010 REMARK 3 9 2.7607 - 2.6544 0.97 2819 170 0.1935 0.2424 REMARK 3 10 2.6544 - 2.5628 0.94 2730 141 0.1983 0.2431 REMARK 3 11 2.5628 - 2.4827 0.84 2431 129 0.1932 0.2513 REMARK 3 12 2.4827 - 2.4117 0.75 2213 114 0.1957 0.2823 REMARK 3 13 2.4117 - 2.3482 0.69 2003 111 0.2059 0.2462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4966 REMARK 3 ANGLE : 1.098 6717 REMARK 3 CHIRALITY : 0.042 709 REMARK 3 PLANARITY : 0.006 878 REMARK 3 DIHEDRAL : 15.508 1849 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009931. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38776 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.348 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE TRIBASIC DEHYDRATE REMARK 280 PH5.0, 18% (W/V) PEG20000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 67 REMARK 465 LYS A 68 REMARK 465 THR A 69 REMARK 465 GLN A 70 REMARK 465 PHE A 71 REMARK 465 ALA A 72 REMARK 465 LEU A 73 REMARK 465 THR A 74 REMARK 465 GLN A 75 REMARK 465 LYS A 76 REMARK 465 GLY A 77 REMARK 465 SER A 78 REMARK 465 ASP A 79 REMARK 465 GLY A 80 REMARK 465 LYS A 81 REMARK 465 PRO A 82 REMARK 465 GLN A 83 REMARK 465 ALA A 84 REMARK 465 PHE A 85 REMARK 465 HIS A 86 REMARK 465 PHE A 87 REMARK 465 VAL A 88 REMARK 465 LYS A 89 REMARK 465 PRO A 90 REMARK 465 HIS A 91 REMARK 465 SER A 288 REMARK 465 THR A 289 REMARK 465 SER A 290 REMARK 465 THR A 291 REMARK 465 GLU A 292 REMARK 465 GLY A 293 REMARK 465 ASN A 329 REMARK 465 GLU A 330 REMARK 465 GLU A 331 REMARK 465 PRO A 332 REMARK 465 VAL A 333 REMARK 465 HIS A 334 REMARK 465 LEU A 335 REMARK 465 ASN A 336 REMARK 465 LEU A 337 REMARK 465 GLN A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 MSE B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 67 REMARK 465 LYS B 68 REMARK 465 THR B 69 REMARK 465 GLN B 70 REMARK 465 PHE B 71 REMARK 465 ALA B 72 REMARK 465 LEU B 73 REMARK 465 THR B 74 REMARK 465 GLN B 75 REMARK 465 LYS B 76 REMARK 465 GLY B 77 REMARK 465 SER B 78 REMARK 465 ASP B 79 REMARK 465 GLY B 80 REMARK 465 LYS B 81 REMARK 465 PRO B 82 REMARK 465 GLN B 83 REMARK 465 ALA B 84 REMARK 465 PHE B 85 REMARK 465 HIS B 86 REMARK 465 PHE B 87 REMARK 465 VAL B 88 REMARK 465 LYS B 89 REMARK 465 PRO B 90 REMARK 465 HIS B 91 REMARK 465 SER B 288 REMARK 465 THR B 289 REMARK 465 SER B 290 REMARK 465 THR B 291 REMARK 465 GLU B 292 REMARK 465 GLY B 293 REMARK 465 ASN B 329 REMARK 465 GLU B 330 REMARK 465 GLU B 331 REMARK 465 PRO B 332 REMARK 465 VAL B 333 REMARK 465 HIS B 334 REMARK 465 LEU B 335 REMARK 465 ASN B 336 REMARK 465 LEU B 337 REMARK 465 GLN B 338 REMARK 465 HIS B 339 REMARK 465 HIS B 340 REMARK 465 HIS B 341 REMARK 465 HIS B 342 REMARK 465 HIS B 343 REMARK 465 HIS B 344 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 20 O HOH A 501 1.92 REMARK 500 OE1 GLU B 296 O HOH B 501 1.94 REMARK 500 OG SER A 219 O HOH A 502 1.95 REMARK 500 O HOH B 566 O HOH B 613 1.97 REMARK 500 O HOH B 629 O HOH B 630 1.98 REMARK 500 O HOH B 586 O HOH B 613 2.00 REMARK 500 O HOH A 605 O HOH A 613 2.00 REMARK 500 OD1 ASP B 33 O HOH B 502 2.07 REMARK 500 OE2 GLU B 10 O HOH B 503 2.12 REMARK 500 NE2 GLN B 287 O HOH B 504 2.14 REMARK 500 O HOH B 604 O HOH B 608 2.15 REMARK 500 N CYS B 294 O HOH B 505 2.15 REMARK 500 OE1 GLU B 10 O HOH B 506 2.15 REMARK 500 OE1 GLU A 296 O HOH A 503 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 617 O HOH B 631 1644 2.07 REMARK 500 O HOH A 561 O HOH B 623 1554 2.08 REMARK 500 O HOH A 612 O HOH B 539 1545 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY B 147 N - CA - C ANGL. DEV. = -20.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 91.10 -66.89 REMARK 500 ALA A 161 -116.38 68.54 REMARK 500 LEU A 173 46.28 -142.36 REMARK 500 TRP A 211 28.66 -143.11 REMARK 500 ASP A 252 73.45 -159.49 REMARK 500 HIS B 148 -19.31 73.08 REMARK 500 ALA B 161 -133.39 40.32 REMARK 500 TRP B 211 29.58 -147.32 REMARK 500 ASP B 252 76.89 -154.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY B 160 -15.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 155 NE2 REMARK 620 2 ASP A 157 OD1 98.5 REMARK 620 3 HIS A 214 NE2 87.1 81.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 155 NE2 REMARK 620 2 ASP B 157 OD1 85.1 REMARK 620 3 HIS B 214 NE2 79.2 85.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 B 401 REMARK 999 REMARK 999 SEQUENCE REMARK 999 GENBANK NUMBER OF THIS POLYPEPTIDE IS MH251252. DBREF 6IUQ A 0 344 PDB 6IUQ 6IUQ 0 344 DBREF 6IUQ B 0 344 PDB 6IUQ 6IUQ 0 344 SEQRES 1 A 345 MSE MSE ASN LYS PHE PRO GLY VAL TYR LYS GLU SER PHE SEQRES 2 A 345 THR ARG ASP TYR GLU ARG LEU HIS ASN LYS ILE SER LYS SEQRES 3 A 345 GLU VAL CYS ASP GLN LEU ASP ASP LYS GLY TYR VAL VAL SEQRES 4 A 345 ILE ASP ASP CYS PHE GLY HIS GLY TRP ALA SER ALA LEU SEQRES 5 A 345 LEU GLU GLU MSE ARG TRP LEU ASN GLU ASN ASP HIS PHE SEQRES 6 A 345 LYS PRO ASN LYS THR GLN PHE ALA LEU THR GLN LYS GLY SEQRES 7 A 345 SER ASP GLY LYS PRO GLN ALA PHE HIS PHE VAL LYS PRO SEQRES 8 A 345 HIS ILE PHE GLU VAL ASP LEU HIS ASP ALA ALA LEU ARG SEQRES 9 A 345 THR LYS VAL PRO GLU LEU ASP ALA LEU PHE HIS SER THR SEQRES 10 A 345 GLU LEU LEU GLN ALA LEU THR THR HIS LEU PRO GLN TYR SEQRES 11 A 345 ASP LEU GLN PHE SER THR SER ASP ARG THR LEU LYS LEU SEQRES 12 A 345 GLN ARG ASN ALA GLY HIS GLY GLY CYS PHE PRO CYS HIS SEQRES 13 A 345 TYR ASP ASN PRO GLY ALA PRO ASN LYS ARG LYS VAL THR SEQRES 14 A 345 CYS LEU LEU TYR LEU ASN GLU GLY TRP LYS GLU GLY ASP SEQRES 15 A 345 GLY GLY GLU VAL GLN LEU PHE PRO PHE LEU GLN GLN PRO SEQRES 16 A 345 VAL THR VAL ALA PRO LYS MSE ASP ARG VAL VAL LEU PHE SEQRES 17 A 345 GLN SER ASP TRP MSE LEU HIS ARG VAL LEU PRO SER HIS SEQRES 18 A 345 ALA GLU ARG TYR VAL LEU THR ILE TRP LEU ASP GLY ALA SEQRES 19 A 345 LYS VAL ASN ALA PRO GLU ASP ALA GLN LEU ARG LEU THR SEQRES 20 A 345 GLN SER ASP LEU ALA ASP TRP PHE GLY PHE LEU GLU ARG SEQRES 21 A 345 LEU ARG ARG SER PRO VAL GLN ARG LEU LEU SER ARG GLY SEQRES 22 A 345 VAL TYR GLU GLU GLU TYR TYR GLU SER LEU MSE GLU CYS SEQRES 23 A 345 MSE GLN SER THR SER THR GLU GLY CYS VAL GLU LEU LEU SEQRES 24 A 345 LYS SER HIS GLU THR HIS VAL GLU ASN VAL LYS ARG ASN SEQRES 25 A 345 GLY PRO LEU TYR GLY PHE ILE GLN ARG LEU ARG ASP VAL SEQRES 26 A 345 ARG ALA MSE ASN ASN GLU GLU PRO VAL HIS LEU ASN LEU SEQRES 27 A 345 GLN HIS HIS HIS HIS HIS HIS SEQRES 1 B 345 MSE MSE ASN LYS PHE PRO GLY VAL TYR LYS GLU SER PHE SEQRES 2 B 345 THR ARG ASP TYR GLU ARG LEU HIS ASN LYS ILE SER LYS SEQRES 3 B 345 GLU VAL CYS ASP GLN LEU ASP ASP LYS GLY TYR VAL VAL SEQRES 4 B 345 ILE ASP ASP CYS PHE GLY HIS GLY TRP ALA SER ALA LEU SEQRES 5 B 345 LEU GLU GLU MSE ARG TRP LEU ASN GLU ASN ASP HIS PHE SEQRES 6 B 345 LYS PRO ASN LYS THR GLN PHE ALA LEU THR GLN LYS GLY SEQRES 7 B 345 SER ASP GLY LYS PRO GLN ALA PHE HIS PHE VAL LYS PRO SEQRES 8 B 345 HIS ILE PHE GLU VAL ASP LEU HIS ASP ALA ALA LEU ARG SEQRES 9 B 345 THR LYS VAL PRO GLU LEU ASP ALA LEU PHE HIS SER THR SEQRES 10 B 345 GLU LEU LEU GLN ALA LEU THR THR HIS LEU PRO GLN TYR SEQRES 11 B 345 ASP LEU GLN PHE SER THR SER ASP ARG THR LEU LYS LEU SEQRES 12 B 345 GLN ARG ASN ALA GLY HIS GLY GLY CYS PHE PRO CYS HIS SEQRES 13 B 345 TYR ASP ASN PRO GLY ALA PRO ASN LYS ARG LYS VAL THR SEQRES 14 B 345 CYS LEU LEU TYR LEU ASN GLU GLY TRP LYS GLU GLY ASP SEQRES 15 B 345 GLY GLY GLU VAL GLN LEU PHE PRO PHE LEU GLN GLN PRO SEQRES 16 B 345 VAL THR VAL ALA PRO LYS MSE ASP ARG VAL VAL LEU PHE SEQRES 17 B 345 GLN SER ASP TRP MSE LEU HIS ARG VAL LEU PRO SER HIS SEQRES 18 B 345 ALA GLU ARG TYR VAL LEU THR ILE TRP LEU ASP GLY ALA SEQRES 19 B 345 LYS VAL ASN ALA PRO GLU ASP ALA GLN LEU ARG LEU THR SEQRES 20 B 345 GLN SER ASP LEU ALA ASP TRP PHE GLY PHE LEU GLU ARG SEQRES 21 B 345 LEU ARG ARG SER PRO VAL GLN ARG LEU LEU SER ARG GLY SEQRES 22 B 345 VAL TYR GLU GLU GLU TYR TYR GLU SER LEU MSE GLU CYS SEQRES 23 B 345 MSE GLN SER THR SER THR GLU GLY CYS VAL GLU LEU LEU SEQRES 24 B 345 LYS SER HIS GLU THR HIS VAL GLU ASN VAL LYS ARG ASN SEQRES 25 B 345 GLY PRO LEU TYR GLY PHE ILE GLN ARG LEU ARG ASP VAL SEQRES 26 B 345 ARG ALA MSE ASN ASN GLU GLU PRO VAL HIS LEU ASN LEU SEQRES 27 B 345 GLN HIS HIS HIS HIS HIS HIS HET MSE A 55 8 HET MSE A 201 8 HET MSE A 212 8 HET MSE A 283 8 HET MSE A 286 8 HET MSE A 327 8 HET MSE B 55 8 HET MSE B 201 8 HET MSE B 212 8 HET MSE B 283 8 HET MSE B 286 8 HET MSE B 327 8 HET FE2 A 401 1 HET FE2 B 401 1 HETNAM MSE SELENOMETHIONINE HETNAM FE2 FE (II) ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 FE2 2(FE 2+) FORMUL 5 HOH *249(H2 O) HELIX 1 AA1 ASP A 15 ILE A 23 1 9 HELIX 2 AA2 SER A 24 GLY A 35 1 12 HELIX 3 AA3 GLY A 44 ASN A 61 1 18 HELIX 4 AA4 ASP A 99 THR A 104 1 6 HELIX 5 AA5 VAL A 106 SER A 115 1 10 HELIX 6 AA6 THR A 116 LEU A 126 1 11 HELIX 7 AA7 PRO A 127 ASP A 130 5 4 HELIX 8 AA8 SER A 134 SER A 136 5 3 HELIX 9 AA9 ALA A 237 GLN A 242 5 6 HELIX 10 AB1 THR A 246 ALA A 251 5 6 HELIX 11 AB2 ASP A 252 ARG A 262 1 11 HELIX 12 AB3 SER A 263 LEU A 268 5 6 HELIX 13 AB4 LEU A 269 TYR A 274 1 6 HELIX 14 AB5 TYR A 274 GLN A 287 1 14 HELIX 15 AB6 VAL A 295 ASN A 311 1 17 HELIX 16 AB7 ASN A 311 ASN A 328 1 18 HELIX 17 AB8 ASP B 15 ILE B 23 1 9 HELIX 18 AB9 SER B 24 GLY B 35 1 12 HELIX 19 AC1 GLY B 44 ASN B 61 1 18 HELIX 20 AC2 ASP B 99 THR B 104 1 6 HELIX 21 AC3 VAL B 106 SER B 115 1 10 HELIX 22 AC4 THR B 116 LEU B 126 1 11 HELIX 23 AC5 PRO B 127 ASP B 130 5 4 HELIX 24 AC6 SER B 134 SER B 136 5 3 HELIX 25 AC7 ALA B 237 GLN B 242 5 6 HELIX 26 AC8 THR B 246 ALA B 251 5 6 HELIX 27 AC9 ASP B 252 ARG B 262 1 11 HELIX 28 AD1 SER B 263 LEU B 268 5 6 HELIX 29 AD2 LEU B 269 TYR B 274 1 6 HELIX 30 AD3 TYR B 274 GLN B 287 1 14 HELIX 31 AD4 VAL B 295 ASN B 311 1 17 HELIX 32 AD5 ASN B 311 ASN B 328 1 18 SHEET 1 AA1 6 TYR A 36 ILE A 39 0 SHEET 2 AA1 6 ARG A 203 GLN A 208 -1 O VAL A 204 N ILE A 39 SHEET 3 AA1 6 ARG A 165 TYR A 172 -1 N LEU A 170 O VAL A 205 SHEET 4 AA1 6 ARG A 223 ASP A 231 -1 O LEU A 226 N LEU A 171 SHEET 5 AA1 6 ARG A 138 ASN A 145 -1 N LYS A 141 O THR A 227 SHEET 6 AA1 6 PHE A 93 ASP A 96 -1 N PHE A 93 O ARG A 144 SHEET 1 AA2 3 VAL A 195 VAL A 197 0 SHEET 2 AA2 3 VAL A 185 PHE A 188 -1 N LEU A 187 O VAL A 195 SHEET 3 AA2 3 LEU A 213 VAL A 216 -1 O ARG A 215 N GLN A 186 SHEET 1 AA3 6 TYR B 36 ILE B 39 0 SHEET 2 AA3 6 ARG B 203 GLN B 208 -1 O VAL B 204 N ILE B 39 SHEET 3 AA3 6 ARG B 165 TYR B 172 -1 N THR B 168 O PHE B 207 SHEET 4 AA3 6 ARG B 223 ASP B 231 -1 O LEU B 226 N LEU B 171 SHEET 5 AA3 6 ARG B 138 ASN B 145 -1 N LYS B 141 O THR B 227 SHEET 6 AA3 6 PHE B 93 ASP B 96 -1 N PHE B 93 O ARG B 144 SHEET 1 AA4 3 VAL B 195 VAL B 197 0 SHEET 2 AA4 3 VAL B 185 PHE B 188 -1 N LEU B 187 O VAL B 195 SHEET 3 AA4 3 LEU B 213 VAL B 216 -1 O ARG B 215 N GLN B 186 SSBOND 1 CYS A 151 CYS A 285 1555 1555 2.05 SSBOND 2 CYS B 151 CYS B 285 1555 1555 2.05 LINK C GLU A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N ARG A 56 1555 1555 1.33 LINK C LYS A 200 N MSE A 201 1555 1555 1.33 LINK C MSE A 201 N ASP A 202 1555 1555 1.33 LINK C TRP A 211 N MSE A 212 1555 1555 1.33 LINK C MSE A 212 N LEU A 213 1555 1555 1.33 LINK C LEU A 282 N MSE A 283 1555 1555 1.34 LINK C MSE A 283 N GLU A 284 1555 1555 1.34 LINK C CYS A 285 N MSE A 286 1555 1555 1.34 LINK C MSE A 286 N GLN A 287 1555 1555 1.33 LINK C ALA A 326 N MSE A 327 1555 1555 1.33 LINK C MSE A 327 N ASN A 328 1555 1555 1.33 LINK C GLU B 54 N MSE B 55 1555 1555 1.32 LINK C MSE B 55 N ARG B 56 1555 1555 1.33 LINK C LYS B 200 N MSE B 201 1555 1555 1.33 LINK C MSE B 201 N ASP B 202 1555 1555 1.33 LINK C TRP B 211 N MSE B 212 1555 1555 1.33 LINK C MSE B 212 N LEU B 213 1555 1555 1.33 LINK C LEU B 282 N MSE B 283 1555 1555 1.33 LINK C MSE B 283 N GLU B 284 1555 1555 1.33 LINK C CYS B 285 N MSE B 286 1555 1555 1.34 LINK C MSE B 286 N GLN B 287 1555 1555 1.33 LINK C ALA B 326 N MSE B 327 1555 1555 1.33 LINK C MSE B 327 N ASN B 328 1555 1555 1.33 LINK NE2 HIS A 155 FE FE2 A 401 1555 1555 2.35 LINK OD1 ASP A 157 FE FE2 A 401 1555 1555 2.42 LINK NE2 HIS A 214 FE FE2 A 401 1555 1555 2.32 LINK NE2 HIS B 155 FE FE2 B 401 1555 1555 2.26 LINK OD1 ASP B 157 FE FE2 B 401 1555 1555 2.37 LINK NE2 HIS B 214 FE FE2 B 401 1555 1555 2.25 SITE 1 AC1 3 HIS A 155 ASP A 157 HIS A 214 SITE 1 AC2 3 HIS B 155 ASP B 157 HIS B 214 CRYST1 61.724 63.782 72.845 80.18 65.27 71.17 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016201 -0.005523 -0.007242 0.00000 SCALE2 0.000000 0.016564 -0.000684 0.00000 SCALE3 0.000000 0.000000 0.015127 0.00000