HEADER IMMUNE SYSTEM 30-NOV-18 6IUT TITLE CRYSTAL STRUCTURE OF INFLUENZA A VIRUS H5 HEMAGGLUTININ GLOBULAR HEAD TITLE 2 IN COMPLEX WITH THE FAB OF ANTIBODY AVFLUIGG01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AVFLUIGG01 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: AVFLUIGG01 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HEMAGGLUTININ; COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)); SOURCE 15 ORGANISM_COMMON: A/ANHUI/1/2005(H5N1); SOURCE 16 ORGANISM_TAXID: 370810; SOURCE 17 GENE: HA; SOURCE 18 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INFLUENZA VIRUS, HPAI, H5N1, NEUTRALIZING ANTIBODY, EPITOPE, MAJOR KEYWDS 2 VULNERABLE SITE, VACCINE DEVELOPMENT, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.WANG,Y.ZUO,J.SUN,L.ZHANG,X.WANG REVDAT 5 22-NOV-23 6IUT 1 REMARK HETSYN LINK REVDAT 4 29-JUL-20 6IUT 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 10-APR-19 6IUT 1 JRNL REVDAT 2 20-FEB-19 6IUT 1 JRNL REVDAT 1 16-JAN-19 6IUT 0 JRNL AUTH P.WANG,Y.ZUO,J.SUN,T.ZUO,S.ZHANG,S.GUO,X.SHI,M.LIANG,P.ZHOU, JRNL AUTH 2 L.ZHANG,X.WANG JRNL TITL STRUCTURAL AND FUNCTIONAL DEFINITION OF A VULNERABLE SITE ON JRNL TITL 2 THE HEMAGGLUTININ OF HIGHLY PATHOGENIC AVIAN INFLUENZA A JRNL TITL 3 VIRUS H5N1. JRNL REF J. BIOL. CHEM. V. 294 4290 2019 JRNL REFN ESSN 1083-351X JRNL PMID 30737282 JRNL DOI 10.1074/JBC.RA118.007008 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 39942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0731 - 5.6604 0.96 2660 125 0.1838 0.2254 REMARK 3 2 5.6604 - 4.4945 1.00 2611 151 0.1591 0.2110 REMARK 3 3 4.4945 - 3.9268 1.00 2636 110 0.1743 0.1931 REMARK 3 4 3.9268 - 3.5680 0.99 2582 135 0.1986 0.2388 REMARK 3 5 3.5680 - 3.3124 0.99 2542 148 0.2099 0.2914 REMARK 3 6 3.3124 - 3.1171 0.99 2533 140 0.2274 0.2390 REMARK 3 7 3.1171 - 2.9611 0.99 2568 131 0.2336 0.3205 REMARK 3 8 2.9611 - 2.8322 0.99 2488 157 0.2361 0.3049 REMARK 3 9 2.8322 - 2.7232 0.99 2556 143 0.2461 0.2753 REMARK 3 10 2.7232 - 2.6292 0.99 2569 113 0.2541 0.3339 REMARK 3 11 2.6292 - 2.5470 0.99 2525 147 0.2567 0.3062 REMARK 3 12 2.5470 - 2.4742 1.00 2559 151 0.2551 0.3353 REMARK 3 13 2.4742 - 2.4091 1.00 2548 127 0.2783 0.3291 REMARK 3 14 2.4091 - 2.3503 1.00 2512 145 0.2677 0.3223 REMARK 3 15 2.3503 - 2.2969 0.79 2018 112 0.2766 0.3317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5125 REMARK 3 ANGLE : 1.101 6995 REMARK 3 CHIRALITY : 0.061 787 REMARK 3 PLANARITY : 0.007 888 REMARK 3 DIHEDRAL : 6.288 3776 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009965. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39949 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.95700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DUT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% W/V POLYETHYLENE GLYCOL 1500, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.98400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.98400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 56.05050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.02300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 56.05050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.02300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.98400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 56.05050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.02300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.98400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 56.05050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.02300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 349 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 353 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 ASP A 45 REMARK 465 GLY A 46 REMARK 465 VAL A 47 REMARK 465 LYS A 48 REMARK 465 PRO A 49 REMARK 465 LEU A 50 REMARK 465 ILE A 51 REMARK 465 GLY A 260 REMARK 465 ASP A 261 REMARK 465 SER A 262 REMARK 465 ALA A 263 REMARK 465 ILE A 264 REMARK 465 VAL A 265 REMARK 465 LYS A 266 REMARK 465 SER A 267 REMARK 465 GLU A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA L 0 N REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 217 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 419 O HOH A 429 1.93 REMARK 500 O HOH L 359 O HOH L 361 1.94 REMARK 500 O HOH H 328 O HOH H 348 1.95 REMARK 500 CA SER H 134 CG2 THR H 139 2.02 REMARK 500 O HOH H 344 O HOH H 346 2.03 REMARK 500 OG SER H 134 CG2 THR H 139 2.04 REMARK 500 OD2 ASP H 105 O3 FUC B 3 2.06 REMARK 500 O ASN A 154 O HOH A 401 2.07 REMARK 500 NE1 TRP A 122 O HOH A 402 2.10 REMARK 500 O HOH L 310 O HOH A 423 2.11 REMARK 500 ND2 ASN A 154 O5 NAG A 301 2.16 REMARK 500 CB SER H 134 CG2 THR H 139 2.17 REMARK 500 O HOH H 320 O HOH H 324 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 14 -10.97 71.72 REMARK 500 SER H 30 -16.35 83.40 REMARK 500 LYS H 42 -169.66 -118.35 REMARK 500 ASP H 52 -142.33 50.96 REMARK 500 SER H 131 -174.10 -179.39 REMARK 500 SER H 136 42.79 81.42 REMARK 500 ALA H 140 123.91 93.42 REMARK 500 LYS H 218 -158.46 48.18 REMARK 500 ASP L 26 -83.48 -133.18 REMARK 500 VAL L 51 -44.63 71.64 REMARK 500 ASN L 52 14.90 -145.08 REMARK 500 LYS L 191 -70.46 -109.53 REMARK 500 ARG A 53 -92.76 -65.26 REMARK 500 SER A 56 -161.92 -77.32 REMARK 500 PHE A 70 -141.47 -156.24 REMARK 500 ILE A 71 -123.63 47.48 REMARK 500 ASN A 72 62.23 -104.91 REMARK 500 GLU A 75 86.14 -41.56 REMARK 500 SER A 77 71.62 -104.06 REMARK 500 TYR A 78 168.66 60.33 REMARK 500 ASP A 88 -114.46 -89.72 REMARK 500 GLU A 99 -70.46 -32.56 REMARK 500 GLN A 138 -77.68 -93.05 REMARK 500 SER A 142 -159.70 -128.25 REMARK 500 LYS A 161 89.91 -162.74 REMARK 500 GLN A 192 -63.47 59.80 REMARK 500 THR A 202 -169.43 -128.17 REMARK 500 ASN A 236 -1.52 78.95 REMARK 500 LYS A 258 -124.94 -87.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 6IUT H 1 219 PDB 6IUT 6IUT 1 219 DBREF 6IUT L 0 215 PDB 6IUT 6IUT 0 215 DBREF 6IUT A 45 268 UNP Q1WDM0 Q1WDM0_9INFA 61 284 SEQADV 6IUT HIS A 269 UNP Q1WDM0 EXPRESSION TAG SEQADV 6IUT HIS A 270 UNP Q1WDM0 EXPRESSION TAG SEQADV 6IUT HIS A 271 UNP Q1WDM0 EXPRESSION TAG SEQADV 6IUT HIS A 272 UNP Q1WDM0 EXPRESSION TAG SEQADV 6IUT HIS A 273 UNP Q1WDM0 EXPRESSION TAG SEQADV 6IUT HIS A 274 UNP Q1WDM0 EXPRESSION TAG SEQRES 1 H 219 VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS PRO SEQRES 2 H 219 SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY GLY SEQRES 3 H 219 SER ILE ASN SER TYR TYR TRP SER TRP ILE ARG GLN PRO SEQRES 4 H 219 PRO GLY LYS GLY LEU GLU TRP ILE GLY TYR LEU PHE ASP SEQRES 5 H 219 SER GLY SER THR LYS TYR ASN PRO SER LEU THR SER ARG SEQRES 6 H 219 VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SER SEQRES 7 H 219 LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA VAL SEQRES 8 H 219 TYR TYR CYS ALA ARG GLY PHE TRP GLY LEU ASP GLY PHE SEQRES 9 H 219 ASP ILE TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 H 219 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 219 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 219 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 219 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 219 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 219 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 219 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 219 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 1 L 216 ALA VAL LEU THR GLN PRO ALA SER VAL SER GLY SER PRO SEQRES 2 L 216 GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SER SEQRES 3 L 216 ASP VAL GLY ASP TYR ASN TYR VAL SER TRP TYR GLN GLN SEQRES 4 L 216 HIS PRO GLY LYS ALA PRO THR LEU MET ILE TYR ASP VAL SEQRES 5 L 216 ASN LYS ARG PRO SER GLY ASP SER ASN ARG PHE SER GLY SEQRES 6 L 216 SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER GLY SEQRES 7 L 216 LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SER SEQRES 8 L 216 TYR THR SER SER ASN THR TRP VAL PHE GLY GLY GLY THR SEQRES 9 L 216 LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 216 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 216 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 216 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 216 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 216 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 216 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 216 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 216 LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 A 230 ASP GLY VAL LYS PRO LEU ILE LEU ARG ASP CYS SER VAL SEQRES 2 A 230 ALA GLY TRP LEU LEU GLY ASN PRO MET CYS ASP GLU PHE SEQRES 3 A 230 ILE ASN VAL PRO GLU TRP SER TYR ILE VAL GLU LYS ALA SEQRES 4 A 230 ASN PRO ALA ASN ASP LEU CYS TYR PRO GLY ASN PHE ASN SEQRES 5 A 230 ASP TYR GLU GLU LEU LYS HIS LEU LEU SER ARG ILE ASN SEQRES 6 A 230 HIS PHE GLU LYS ILE GLN ILE ILE PRO LYS SER SER TRP SEQRES 7 A 230 SER ASP HIS GLU ALA SER SER GLY VAL SER SER ALA CYS SEQRES 8 A 230 PRO TYR GLN GLY THR PRO SER PHE PHE ARG ASN VAL VAL SEQRES 9 A 230 TRP LEU ILE LYS LYS ASN ASN THR TYR PRO THR ILE LYS SEQRES 10 A 230 ARG SER TYR ASN ASN THR ASN GLN GLU ASP LEU LEU ILE SEQRES 11 A 230 LEU TRP GLY ILE HIS HIS SER ASN ASP ALA ALA GLU GLN SEQRES 12 A 230 THR LYS LEU TYR GLN ASN PRO THR THR TYR ILE SER VAL SEQRES 13 A 230 GLY THR SER THR LEU ASN GLN ARG LEU VAL PRO LYS ILE SEQRES 14 A 230 ALA THR ARG SER LYS VAL ASN GLY GLN SER GLY ARG MET SEQRES 15 A 230 ASP PHE PHE TRP THR ILE LEU LYS PRO ASN ASP ALA ILE SEQRES 16 A 230 ASN PHE GLU SER ASN GLY ASN PHE ILE ALA PRO GLU TYR SEQRES 17 A 230 ALA TYR LYS ILE VAL LYS LYS GLY ASP SER ALA ILE VAL SEQRES 18 A 230 LYS SER GLU HIS HIS HIS HIS HIS HIS HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET NAG A 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 6 HOH *151(H2 O) HELIX 1 AA1 THR H 85 THR H 89 5 5 HELIX 2 AA2 SER H 160 ALA H 162 5 3 HELIX 3 AA3 PRO H 189 LEU H 193 5 5 HELIX 4 AA4 LYS H 205 ASN H 208 5 4 HELIX 5 AA5 SER L 56 ASN L 60 5 5 HELIX 6 AA6 GLN L 79 GLU L 83 5 5 HELIX 7 AA7 SER L 122 LYS L 127 1 6 HELIX 8 AA8 LYS L 184 GLU L 188 1 5 HELIX 9 AA9 VAL A 57 GLY A 63 1 7 HELIX 10 AB1 ASP A 97 ARG A 107 1 11 HELIX 11 AB2 PRO A 118 TRP A 122 5 5 HELIX 12 AB3 ASP A 183 GLN A 192 1 10 SHEET 1 AA1 4 GLN H 2 SER H 6 0 SHEET 2 AA1 4 LEU H 17 SER H 24 -1 O THR H 20 N SER H 6 SHEET 3 AA1 4 GLN H 76 LEU H 81 -1 O PHE H 77 N CYS H 21 SHEET 4 AA1 4 VAL H 66 ASP H 71 -1 N SER H 69 O SER H 78 SHEET 1 AA2 6 LEU H 10 VAL H 11 0 SHEET 2 AA2 6 THR H 111 VAL H 115 1 O THR H 114 N VAL H 11 SHEET 3 AA2 6 ALA H 90 GLY H 97 -1 N ALA H 90 O VAL H 113 SHEET 4 AA2 6 TYR H 32 GLN H 38 -1 N ILE H 36 O TYR H 93 SHEET 5 AA2 6 GLU H 45 PHE H 51 -1 O LEU H 50 N TRP H 33 SHEET 6 AA2 6 SER H 55 TYR H 58 -1 O SER H 55 N PHE H 51 SHEET 1 AA3 4 LEU H 10 VAL H 11 0 SHEET 2 AA3 4 THR H 111 VAL H 115 1 O THR H 114 N VAL H 11 SHEET 3 AA3 4 ALA H 90 GLY H 97 -1 N ALA H 90 O VAL H 113 SHEET 4 AA3 4 ILE H 106 TRP H 107 -1 O ILE H 106 N ARG H 96 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 ALA H 141 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA4 4 TYR H 180 THR H 187 -1 O TYR H 180 N TYR H 149 SHEET 4 AA4 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA5 4 SER H 124 LEU H 128 0 SHEET 2 AA5 4 ALA H 141 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA5 4 TYR H 180 THR H 187 -1 O TYR H 180 N TYR H 149 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA6 3 THR H 209 VAL H 215 -1 O VAL H 215 N TYR H 198 SHEET 1 AA7 5 SER L 7 GLY L 10 0 SHEET 2 AA7 5 THR L 103 ILE L 107 1 O GLU L 106 N VAL L 8 SHEET 3 AA7 5 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 103 SHEET 4 AA7 5 VAL L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA7 5 THR L 45 ILE L 48 -1 O MET L 47 N TRP L 35 SHEET 1 AA8 4 SER L 7 GLY L 10 0 SHEET 2 AA8 4 THR L 103 ILE L 107 1 O GLU L 106 N VAL L 8 SHEET 3 AA8 4 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 103 SHEET 4 AA8 4 TRP L 97 PHE L 99 -1 O VAL L 98 N SER L 90 SHEET 1 AA9 3 ILE L 16 THR L 21 0 SHEET 2 AA9 3 THR L 70 ILE L 75 -1 O ALA L 71 N CYS L 20 SHEET 3 AA9 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB1 4 TYR L 174 SER L 183 -1 O LEU L 180 N VAL L 133 SHEET 4 AB1 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB2 4 ALA L 154 LEU L 155 0 SHEET 2 AB2 4 LYS L 146 VAL L 151 -1 N VAL L 151 O ALA L 154 SHEET 3 AB2 4 TYR L 193 THR L 198 -1 O THR L 198 N LYS L 146 SHEET 4 AB2 4 VAL L 206 PHE L 210 -1 O LYS L 208 N CYS L 195 SHEET 1 AB3 5 HIS A 110 GLN A 115 0 SHEET 2 AB3 5 TYR A 252 VAL A 257 -1 O LYS A 255 N GLU A 112 SHEET 3 AB3 5 ASP A 171 HIS A 180 -1 N LEU A 173 O TYR A 254 SHEET 4 AB3 5 PHE A 247 PRO A 250 -1 O ILE A 248 N GLY A 177 SHEET 5 AB3 5 VAL A 147 TRP A 149 -1 N VAL A 148 O ALA A 249 SHEET 1 AB4 4 HIS A 110 GLN A 115 0 SHEET 2 AB4 4 TYR A 252 VAL A 257 -1 O LYS A 255 N GLU A 112 SHEET 3 AB4 4 ASP A 171 HIS A 180 -1 N LEU A 173 O TYR A 254 SHEET 4 AB4 4 ARG A 225 LEU A 233 -1 O ARG A 225 N HIS A 180 SHEET 1 AB5 2 SER A 132 PRO A 136 0 SHEET 2 AB5 2 PRO A 141 SER A 142 -1 O SER A 142 N SER A 132 SHEET 1 AB6 4 ILE A 160 ASN A 165 0 SHEET 2 AB6 4 ALA A 238 SER A 243 -1 O PHE A 241 N ARG A 162 SHEET 3 AB6 4 ILE A 198 THR A 202 -1 N GLY A 201 O ASN A 240 SHEET 4 AB6 4 LEU A 205 LEU A 209 -1 O GLN A 207 N VAL A 200 SSBOND 1 CYS H 21 CYS H 94 1555 1555 2.16 SSBOND 2 CYS H 144 CYS H 200 1555 1555 2.08 SSBOND 3 CYS L 20 CYS L 88 1555 1555 2.08 SSBOND 4 CYS L 135 CYS L 195 1555 1555 2.05 SSBOND 5 CYS A 55 CYS A 67 1555 1555 2.03 LINK ND2 ASN A 154 C1 NAG A 301 1555 1555 1.43 LINK ND2 ASN A 165 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.44 CISPEP 1 PHE H 150 PRO H 151 0 -10.14 CISPEP 2 GLU H 152 PRO H 153 0 -0.95 CISPEP 3 TYR L 141 PRO L 142 0 -0.56 CRYST1 112.101 150.046 107.968 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009262 0.00000