HEADER MOTOR PROTEIN 28-DEC-18 6J17 TITLE ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESX-3 SECRETION SYSTEM PROTEIN ECCC3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ESX CONSERVED COMPONENT C3,TYPE VII SECRETION SYSTEM PROTEIN COMPND 5 ECCC3,T7SS PROTEIN ECCC3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: ECCC3, RV0284; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ATPASE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.H.WANG,J.LI,Z.H.RAO REVDAT 3 22-NOV-23 6J17 1 LINK REVDAT 2 29-JAN-20 6J17 1 JRNL REVDAT 1 04-DEC-19 6J17 0 JRNL AUTH S.WANG,K.ZHOU,X.YANG,B.ZHANG,Y.ZHAO,Y.XIAO,X.YANG,H.YANG, JRNL AUTH 2 L.W.GUDDAT,J.LI,Z.RAO JRNL TITL STRUCTURAL INSIGHTS INTO SUBSTRATE RECOGNITION BY THE TYPE JRNL TITL 2 VII SECRETION SYSTEM. JRNL REF PROTEIN CELL V. 11 124 2020 JRNL REFN ESSN 1674-8018 JRNL PMID 31758528 JRNL DOI 10.1007/S13238-019-00671-Z REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 19172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3627 - 3.7782 1.00 2929 164 0.1639 0.2085 REMARK 3 2 3.7782 - 2.9990 1.00 2793 153 0.1774 0.2347 REMARK 3 3 2.9990 - 2.6200 1.00 2814 107 0.1987 0.2350 REMARK 3 4 2.6200 - 2.3804 0.99 2726 148 0.1949 0.2241 REMARK 3 5 2.3804 - 2.2098 0.92 2545 127 0.1923 0.2399 REMARK 3 6 2.2098 - 2.0795 0.85 2330 131 0.2052 0.2528 REMARK 3 7 2.0795 - 1.9754 0.77 2105 100 0.2169 0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2029 REMARK 3 ANGLE : 1.328 2776 REMARK 3 CHIRALITY : 0.080 324 REMARK 3 PLANARITY : 0.008 359 REMARK 3 DIHEDRAL : 10.314 1231 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1060 THROUGH 1096 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5626 3.6056 33.0364 REMARK 3 T TENSOR REMARK 3 T11: 0.4840 T22: 0.3477 REMARK 3 T33: 0.2936 T12: 0.0739 REMARK 3 T13: 0.1177 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.4779 L22: 1.8747 REMARK 3 L33: 5.2404 L12: -0.3070 REMARK 3 L13: 1.1755 L23: -0.4474 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: -0.1754 S13: 0.0993 REMARK 3 S21: 0.6811 S22: 0.0284 S23: 0.3745 REMARK 3 S31: -0.6215 S32: -0.5902 S33: 0.0603 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1097 THROUGH 1176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5102 -4.4321 13.8259 REMARK 3 T TENSOR REMARK 3 T11: 0.2144 T22: 0.2490 REMARK 3 T33: 0.2991 T12: 0.0142 REMARK 3 T13: -0.0294 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.9087 L22: 3.2663 REMARK 3 L33: 4.0912 L12: -0.4314 REMARK 3 L13: 0.9086 L23: -0.7812 REMARK 3 S TENSOR REMARK 3 S11: 0.0940 S12: 0.1367 S13: -0.2021 REMARK 3 S21: -0.3240 S22: 0.0002 S23: 0.5846 REMARK 3 S31: 0.2594 S32: -0.4705 S33: -0.0931 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1177 THROUGH 1201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0660 13.4696 6.3160 REMARK 3 T TENSOR REMARK 3 T11: 0.6312 T22: 0.5391 REMARK 3 T33: 0.6670 T12: 0.1942 REMARK 3 T13: -0.0418 T23: 0.1047 REMARK 3 L TENSOR REMARK 3 L11: 3.7096 L22: 2.0664 REMARK 3 L33: 3.1369 L12: 1.1478 REMARK 3 L13: -1.6068 L23: -0.9117 REMARK 3 S TENSOR REMARK 3 S11: 0.2276 S12: 0.3496 S13: 1.2409 REMARK 3 S21: -0.5172 S22: 0.4152 S23: 1.0165 REMARK 3 S31: -1.0008 S32: -0.9284 S33: 0.3624 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1202 THROUGH 1235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0980 -2.8537 2.5564 REMARK 3 T TENSOR REMARK 3 T11: 0.4026 T22: 0.3011 REMARK 3 T33: 0.2342 T12: 0.0885 REMARK 3 T13: 0.0166 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.5106 L22: 1.6037 REMARK 3 L33: 3.5166 L12: -0.3211 REMARK 3 L13: 1.1165 L23: 0.6031 REMARK 3 S TENSOR REMARK 3 S11: 0.2668 S12: 0.3472 S13: -0.1049 REMARK 3 S21: -0.5425 S22: -0.2487 S23: 0.1081 REMARK 3 S31: -0.0320 S32: 0.2279 S33: -0.1643 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1236 THROUGH 1271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2122 2.7577 13.3932 REMARK 3 T TENSOR REMARK 3 T11: 0.2434 T22: 0.2214 REMARK 3 T33: 0.2425 T12: -0.0029 REMARK 3 T13: 0.0668 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 2.9479 L22: 4.0044 REMARK 3 L33: 5.5034 L12: -0.6216 REMARK 3 L13: 1.6391 L23: -0.7910 REMARK 3 S TENSOR REMARK 3 S11: -0.1010 S12: 0.1759 S13: 0.1854 REMARK 3 S21: -0.4942 S22: -0.0627 S23: -0.4697 REMARK 3 S31: -0.2525 S32: 0.3436 S33: 0.1429 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1272 THROUGH 1313 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6056 0.7075 27.4666 REMARK 3 T TENSOR REMARK 3 T11: 0.2860 T22: 0.1756 REMARK 3 T33: 0.2096 T12: 0.0115 REMARK 3 T13: -0.0063 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 4.2499 L22: 5.9765 REMARK 3 L33: 5.8853 L12: 0.5498 REMARK 3 L13: 0.2744 L23: -0.6025 REMARK 3 S TENSOR REMARK 3 S11: -0.0789 S12: -0.1152 S13: 0.0389 REMARK 3 S21: 0.3552 S22: -0.0342 S23: -0.5716 REMARK 3 S31: -0.0702 S32: 0.3408 S33: 0.0937 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300009606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19248 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NH0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES/SODIUM HYDROXIDE PH 7.5, REMARK 280 0.2 M SODIUM CHLORIDE, 20% (W/V) PEG3000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.68150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.76600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.31400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.76600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.68150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.31400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1015 REMARK 465 LYS A 1016 REMARK 465 TYR A 1017 REMARK 465 LEU A 1018 REMARK 465 LEU A 1019 REMARK 465 PRO A 1020 REMARK 465 THR A 1021 REMARK 465 ALA A 1022 REMARK 465 ALA A 1023 REMARK 465 ALA A 1024 REMARK 465 GLY A 1025 REMARK 465 LEU A 1026 REMARK 465 LEU A 1027 REMARK 465 LEU A 1028 REMARK 465 LEU A 1029 REMARK 465 ALA A 1030 REMARK 465 ALA A 1031 REMARK 465 GLN A 1032 REMARK 465 PRO A 1033 REMARK 465 ALA A 1034 REMARK 465 MET A 1035 REMARK 465 ALA A 1036 REMARK 465 MET A 1037 REMARK 465 ASP A 1038 REMARK 465 SER A 1039 REMARK 465 SER A 1040 REMARK 465 GLY A 1041 REMARK 465 LEU A 1042 REMARK 465 GLU A 1043 REMARK 465 VAL A 1044 REMARK 465 LEU A 1045 REMARK 465 PHE A 1046 REMARK 465 GLN A 1047 REMARK 465 GLY A 1048 REMARK 465 PRO A 1049 REMARK 465 GLY A 1050 REMARK 465 SER A 1051 REMARK 465 PRO A 1052 REMARK 465 GLY A 1053 REMARK 465 MET A 1054 REMARK 465 ALA A 1055 REMARK 465 ALA A 1056 REMARK 465 PRO A 1057 REMARK 465 PRO A 1058 REMARK 465 VAL A 1059 REMARK 465 VAL A 1314 REMARK 465 ASP A 1315 REMARK 465 ALA A 1316 REMARK 465 ALA A 1317 REMARK 465 ALA A 1318 REMARK 465 VAL A 1319 REMARK 465 SER A 1320 REMARK 465 GLY A 1321 REMARK 465 GLU A 1322 REMARK 465 THR A 1323 REMARK 465 GLN A 1324 REMARK 465 GLN A 1325 REMARK 465 LYS A 1326 REMARK 465 GLY A 1327 REMARK 465 SER A 1328 REMARK 465 GLN A 1329 REMARK 465 SER A 1330 REMARK 465 LEU A 1331 REMARK 465 GLU A 1332 REMARK 465 HIS A 1333 REMARK 465 HIS A 1334 REMARK 465 HIS A 1335 REMARK 465 HIS A 1336 REMARK 465 HIS A 1337 REMARK 465 HIS A 1338 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1068 3.69 -69.51 REMARK 500 ASP A1089 11.53 -142.08 REMARK 500 ASP A1139 84.03 -154.05 REMARK 500 LEU A1149 -161.50 -110.24 REMARK 500 SER A1183 102.58 -160.50 REMARK 500 THR A1191 -126.91 48.96 REMARK 500 LEU A1272 -164.22 -76.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A1114 OG1 REMARK 620 2 ATP A1401 O2G 172.6 REMARK 620 3 ATP A1401 O1B 86.8 89.2 REMARK 620 4 HOH A1539 O 82.7 91.9 99.9 REMARK 620 5 HOH A1553 O 93.6 92.3 84.4 174.1 REMARK 620 6 HOH A1583 O 87.3 97.2 171.7 85.1 90.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1402 DBREF 6J17 A 1052 1330 UNP P9WNA9 ECCC3_MYCTU 1052 1330 SEQADV 6J17 MET A 1015 UNP P9WNA9 INITIATING METHIONINE SEQADV 6J17 LYS A 1016 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 TYR A 1017 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1018 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1019 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 PRO A 1020 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 THR A 1021 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1022 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1023 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1024 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLY A 1025 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1026 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1027 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1028 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1029 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1030 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1031 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLN A 1032 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 PRO A 1033 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1034 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 MET A 1035 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ALA A 1036 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 MET A 1037 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 ASP A 1038 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 SER A 1039 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 SER A 1040 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLY A 1041 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1042 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLU A 1043 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 VAL A 1044 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1045 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 PHE A 1046 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLN A 1047 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLY A 1048 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 PRO A 1049 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLY A 1050 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 SER A 1051 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 LEU A 1331 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 GLU A 1332 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1333 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1334 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1335 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1336 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1337 UNP P9WNA9 EXPRESSION TAG SEQADV 6J17 HIS A 1338 UNP P9WNA9 EXPRESSION TAG SEQRES 1 A 324 MET LYS TYR LEU LEU PRO THR ALA ALA ALA GLY LEU LEU SEQRES 2 A 324 LEU LEU ALA ALA GLN PRO ALA MET ALA MET ASP SER SER SEQRES 3 A 324 GLY LEU GLU VAL LEU PHE GLN GLY PRO GLY SER PRO GLY SEQRES 4 A 324 MET ALA ALA PRO PRO VAL ARG LEU LEU PRO THR ASN LEU SEQRES 5 A 324 ALA PRO HIS ALA VAL GLY GLU LEU TYR ARG GLY PRO ASP SEQRES 6 A 324 GLN LEU VAL ILE GLY GLN ARG GLU GLU ASP LEU ALA PRO SEQRES 7 A 324 VAL ILE LEU ASP LEU ALA ALA ASN PRO LEU LEU MET VAL SEQRES 8 A 324 PHE GLY ASP ALA ARG SER GLY LYS THR THR LEU LEU ARG SEQRES 9 A 324 HIS ILE ILE ARG THR VAL ARG GLU HIS SER THR ALA ASP SEQRES 10 A 324 ARG VAL ALA PHE THR VAL LEU ASP ARG ARG LEU HIS LEU SEQRES 11 A 324 VAL ASP GLU PRO LEU PHE PRO ASP ASN GLU TYR THR ALA SEQRES 12 A 324 ASN ILE ASP ARG ILE ILE PRO ALA MET LEU GLY LEU ALA SEQRES 13 A 324 ASN LEU ILE GLU ALA ARG ARG PRO PRO ALA GLY MET SER SEQRES 14 A 324 ALA ALA GLU LEU SER ARG TRP THR PHE ALA GLY HIS THR SEQRES 15 A 324 HIS TYR LEU ILE ILE ASP ASP VAL ASP GLN VAL PRO ASP SEQRES 16 A 324 SER PRO ALA MET THR GLY PRO TYR ILE GLY GLN ARG PRO SEQRES 17 A 324 TRP THR PRO LEU ILE GLY LEU LEU ALA GLN ALA GLY ASP SEQRES 18 A 324 LEU GLY LEU ARG VAL ILE VAL THR GLY ARG ALA THR GLY SEQRES 19 A 324 SER ALA HIS LEU LEU MET THR SER PRO LEU LEU ARG ARG SEQRES 20 A 324 PHE ASN ASP LEU GLN ALA THR THR LEU MET LEU ALA GLY SEQRES 21 A 324 ASN PRO ALA ASP SER GLY LYS ILE ARG GLY GLU ARG PHE SEQRES 22 A 324 ALA ARG LEU PRO ALA GLY ARG ALA ILE LEU LEU THR ASP SEQRES 23 A 324 SER ASP SER PRO THR TYR VAL GLN LEU ILE ASN PRO LEU SEQRES 24 A 324 VAL ASP ALA ALA ALA VAL SER GLY GLU THR GLN GLN LYS SEQRES 25 A 324 GLY SER GLN SER LEU GLU HIS HIS HIS HIS HIS HIS HET ATP A1401 31 HET MG A1402 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *148(H2 O) HELIX 1 AA1 GLY A 1112 HIS A 1127 1 16 HELIX 2 AA2 ARG A 1161 ALA A 1175 1 15 HELIX 3 AA3 ASP A 1203 VAL A 1207 5 5 HELIX 4 AA4 TRP A 1223 GLY A 1228 1 6 HELIX 5 AA5 LEU A 1229 LEU A 1236 5 8 HELIX 6 AA6 GLY A 1248 SER A 1256 1 9 HELIX 7 AA7 SER A 1256 LEU A 1265 1 10 SHEET 1 AA110 PRO A1092 ASP A1096 0 SHEET 2 AA110 GLN A1080 ARG A1086 -1 N LEU A1081 O LEU A1095 SHEET 3 AA110 THR A1305 LEU A1309 -1 O GLN A1308 N GLN A1085 SHEET 4 AA110 ARG A1294 LEU A1298 -1 N LEU A1297 O THR A1305 SHEET 5 AA110 THR A1268 MET A1271 -1 N THR A1269 O LEU A1298 SHEET 6 AA110 LEU A1102 PHE A1106 1 N PHE A1106 O LEU A1270 SHEET 7 AA110 LEU A1238 GLY A1244 1 O VAL A1242 N LEU A1103 SHEET 8 AA110 THR A1196 ILE A1201 1 N LEU A1199 O ARG A1239 SHEET 9 AA110 VAL A1133 LEU A1138 1 N THR A1136 O ILE A1200 SHEET 10 AA110 GLU A1154 THR A1156 1 O GLU A1154 N VAL A1137 SHEET 1 AA2 2 LYS A1281 ILE A1282 0 SHEET 2 AA2 2 GLU A1285 ARG A1286 -1 O GLU A1285 N ILE A1282 LINK OG1 THR A1114 MG MG A1402 1555 1555 2.15 LINK O2G ATP A1401 MG MG A1402 1555 1555 2.04 LINK O1B ATP A1401 MG MG A1402 1555 1555 2.22 LINK MG MG A1402 O HOH A1539 1555 1555 2.14 LINK MG MG A1402 O HOH A1553 1555 1555 2.18 LINK MG MG A1402 O HOH A1583 1555 1555 2.09 SITE 1 AC1 27 THR A1064 ALA A1109 ARG A1110 SER A1111 SITE 2 AC1 27 GLY A1112 LYS A1113 THR A1114 THR A1115 SITE 3 AC1 27 ARG A1141 ARG A1245 ALA A1292 GLY A1293 SITE 4 AC1 27 GLN A1308 LEU A1309 ILE A1310 ASN A1311 SITE 5 AC1 27 MG A1402 HOH A1502 HOH A1505 HOH A1536 SITE 6 AC1 27 HOH A1539 HOH A1553 HOH A1554 HOH A1581 SITE 7 AC1 27 HOH A1583 HOH A1593 HOH A1611 SITE 1 AC2 5 THR A1114 ATP A1401 HOH A1539 HOH A1553 SITE 2 AC2 5 HOH A1583 CRYST1 53.363 56.628 93.532 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018740 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010692 0.00000