HEADER IMMUNE SYSTEM 01-JAN-19 6J2H TITLE CRYSTAL STRUCTURE OF BAT (PTEROPUS ALECTO) MHC CLASS I PTAL-N*01:01 TITLE 2 MUTANT (MET52 ASP53 LEU54 DELETED) IN COMPLEX WITH HENDRA VIRUS- TITLE 3 DERIVED PEPTIDE HEV1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PTAL-N*01:01 (MET52 ASP53 LEU54 DELETED); COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: HEV1; COMPND 12 CHAIN: C, F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PTEROPUS ALECTO; SOURCE 3 ORGANISM_COMMON: BLACK FLYING FOX; SOURCE 4 ORGANISM_TAXID: 9402; SOURCE 5 GENE: PTAL-N; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: B2M; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: HENDRA VIRUS; SOURCE 20 ORGANISM_TAXID: 63330 KEYWDS IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.LU,K.F.LIU,C.YUE,Q.LU,H.CHENG,Y.CHAI,J.X.QI,G.F.GAO,W.J.LIU REVDAT 3 04-DEC-19 6J2H 1 TITLE REVDAT 2 25-SEP-19 6J2H 1 TITLE COMPND REVDAT 1 18-SEP-19 6J2H 0 JRNL AUTH D.LU,K.LIU,D.ZHANG,C.YUE,Q.LU,H.CHENG,L.WANG,Y.CHAI,J.QI, JRNL AUTH 2 L.F.WANG,G.F.GAO,W.J.LIU JRNL TITL PEPTIDE PRESENTATION BY BAT MHC CLASS I PROVIDES NEW INSIGHT JRNL TITL 2 INTO THE ANTIVIRAL IMMUNITY OF BATS. JRNL REF PLOS BIOL. V. 17 00436 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 31498797 JRNL DOI 10.1371/JOURNAL.PBIO.3000436 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 40524 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2039 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.6540 - 4.4905 1.00 2662 151 0.1564 0.1857 REMARK 3 2 4.4905 - 3.9236 0.98 2616 150 0.1564 0.1749 REMARK 3 3 3.9236 - 3.5653 1.00 2600 157 0.1827 0.1997 REMARK 3 4 3.5653 - 3.3099 1.00 2653 112 0.1957 0.2394 REMARK 3 5 3.3099 - 3.1149 1.00 2631 124 0.2108 0.2596 REMARK 3 6 3.1149 - 2.9590 1.00 2610 146 0.2212 0.2595 REMARK 3 7 2.9590 - 2.8302 0.98 2550 156 0.2247 0.2632 REMARK 3 8 2.8302 - 2.7213 0.98 2583 127 0.2263 0.2639 REMARK 3 9 2.7213 - 2.6274 0.97 2552 116 0.2396 0.3110 REMARK 3 10 2.6274 - 2.5453 0.97 2522 125 0.2342 0.2917 REMARK 3 11 2.5453 - 2.4725 0.96 2499 126 0.2523 0.2591 REMARK 3 12 2.4725 - 2.4075 0.95 2481 134 0.2292 0.2742 REMARK 3 13 5.6540 - 2.3800 0.99 2752 151 0.1810 0.1908 REMARK 3 14 2.4075 - 2.3487 0.94 2456 136 0.2253 0.3121 REMARK 3 15 2.3487 - 2.3000 0.89 2318 128 0.2352 0.2667 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6488 REMARK 3 ANGLE : 0.756 8826 REMARK 3 CHIRALITY : 0.052 884 REMARK 3 PLANARITY : 0.004 1174 REMARK 3 DIHEDRAL : 25.478 2390 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J2H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : SDMS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40730 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.8070 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM FORMATE, 20%(W/V) REMARK 280 POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.25250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.25250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.32550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.25200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.32550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.25200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.25250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.32550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.25200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.25250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.32550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.25200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 416 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 397 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 398 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY D 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 73 CG2 REMARK 470 THR E 73 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG D 65 O HOH D 301 2.04 REMARK 500 O HOH E 144 O HOH E 146 2.08 REMARK 500 O HOH B 106 O HOH B 129 2.09 REMARK 500 NE ARG E 3 O HOH E 101 2.12 REMARK 500 O HOH A 405 O HOH B 114 2.12 REMARK 500 O HOH B 119 O HOH B 126 2.17 REMARK 500 NE2 GLN A 115 O HOH A 301 2.17 REMARK 500 NE2 GLN D 262 O HOH D 302 2.18 REMARK 500 NH2 ARG D 111 O HOH D 303 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 124 O HOH D 389 3555 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -118.84 51.69 REMARK 500 PRO B 32 -166.27 -77.71 REMARK 500 ASP D 29 -118.81 51.65 REMARK 500 ASP D 56 139.65 -37.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 415 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 416 DISTANCE = 6.08 ANGSTROMS DBREF1 6J2H A 1 274 UNP A0A125R585_PTEAL DBREF2 6J2H A A0A125R585 25 301 DBREF 6J2H B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6J2H C 1 8 PDB 6J2H 6J2H 1 8 DBREF1 6J2H D 1 274 UNP A0A125R585_PTEAL DBREF2 6J2H D A0A125R585 25 301 DBREF 6J2H E 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 6J2H F 1 8 PDB 6J2H 6J2H 1 8 SEQADV 6J2H A UNP A0A125R58 MET 76 DELETION SEQADV 6J2H A UNP A0A125R58 ASP 77 DELETION SEQADV 6J2H A UNP A0A125R58 LEU 78 DELETION SEQADV 6J2H SER B -1 UNP P61769 EXPRESSION TAG SEQADV 6J2H HIS B 0 UNP P61769 EXPRESSION TAG SEQADV 6J2H D UNP A0A125R58 MET 76 DELETION SEQADV 6J2H D UNP A0A125R58 ASP 77 DELETION SEQADV 6J2H D UNP A0A125R58 LEU 78 DELETION SEQADV 6J2H SER E -1 UNP P61769 EXPRESSION TAG SEQADV 6J2H HIS E 0 UNP P61769 EXPRESSION TAG SEQRES 1 A 274 GLY PHE HIS SER LEU ARG TYR PHE TYR THR ALA TRP SER SEQRES 2 A 274 ARG PRO GLY SER GLY GLU PRO ARG PHE VAL ALA VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 274 ASN ALA SER PRO ARG ALA GLU PRO ARG ALA PRO TRP VAL SEQRES 5 A 274 GLU GLN GLN ASP PRO GLN TYR TRP ASP ARG ASN THR ARG SEQRES 6 A 274 ASN ALA ARG ASP ALA ALA GLN THR TYR ARG VAL GLY LEU SEQRES 7 A 274 ASP ASN VAL ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS THR ILE GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 274 PRO HIS GLY ARG LEU LEU ARG GLY TYR ASP GLN LEU ALA SEQRES 10 A 274 TYR ASP GLY ALA ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 274 ARG SER TRP THR ALA ALA ASP LEU ALA ALA GLN ASN THR SEQRES 12 A 274 ARG ARG LYS TRP GLU GLU ALA GLY TYR ALA GLU ARG ASP SEQRES 13 A 274 ARG ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU LEU SEQRES 14 A 274 LYS HIS LEU GLU ASN GLY ARG GLU THR LEU LEU ARG ALA SEQRES 15 A 274 ASP PRO PRO LYS THR HIS ILE THR HIS HIS PRO ILE SER SEQRES 16 A 274 ASP ARG GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 274 TYR PRO GLU GLU ILE THR LEU THR TRP GLN HIS ASP GLY SEQRES 18 A 274 GLU ASP GLN THR GLN GLU MET GLU LEU VAL GLU THR ARG SEQRES 19 A 274 PRO ASP GLY ASN GLY ALA PHE GLN LYS TRP ALA ALA LEU SEQRES 20 A 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU PRO GLN PRO LEU THR LEU ARG SEQRES 22 A 274 TRP SEQRES 1 B 101 SER HIS ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER SEQRES 2 B 101 ARG HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN SEQRES 3 B 101 CYS TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL SEQRES 4 B 101 ASP LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU SEQRES 5 B 101 HIS SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR SEQRES 6 B 101 LEU LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP SEQRES 7 B 101 GLU TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN SEQRES 8 B 101 PRO LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 8 ASP PHE ALA ASN THR PHE LEU PRO SEQRES 1 D 274 GLY PHE HIS SER LEU ARG TYR PHE TYR THR ALA TRP SER SEQRES 2 D 274 ARG PRO GLY SER GLY GLU PRO ARG PHE VAL ALA VAL GLY SEQRES 3 D 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 D 274 ASN ALA SER PRO ARG ALA GLU PRO ARG ALA PRO TRP VAL SEQRES 5 D 274 GLU GLN GLN ASP PRO GLN TYR TRP ASP ARG ASN THR ARG SEQRES 6 D 274 ASN ALA ARG ASP ALA ALA GLN THR TYR ARG VAL GLY LEU SEQRES 7 D 274 ASP ASN VAL ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 D 274 SER HIS THR ILE GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 D 274 PRO HIS GLY ARG LEU LEU ARG GLY TYR ASP GLN LEU ALA SEQRES 10 D 274 TYR ASP GLY ALA ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 D 274 ARG SER TRP THR ALA ALA ASP LEU ALA ALA GLN ASN THR SEQRES 12 D 274 ARG ARG LYS TRP GLU GLU ALA GLY TYR ALA GLU ARG ASP SEQRES 13 D 274 ARG ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU LEU SEQRES 14 D 274 LYS HIS LEU GLU ASN GLY ARG GLU THR LEU LEU ARG ALA SEQRES 15 D 274 ASP PRO PRO LYS THR HIS ILE THR HIS HIS PRO ILE SER SEQRES 16 D 274 ASP ARG GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 D 274 TYR PRO GLU GLU ILE THR LEU THR TRP GLN HIS ASP GLY SEQRES 18 D 274 GLU ASP GLN THR GLN GLU MET GLU LEU VAL GLU THR ARG SEQRES 19 D 274 PRO ASP GLY ASN GLY ALA PHE GLN LYS TRP ALA ALA LEU SEQRES 20 D 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 D 274 VAL GLN HIS GLU GLY LEU PRO GLN PRO LEU THR LEU ARG SEQRES 22 D 274 TRP SEQRES 1 E 101 SER HIS ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER SEQRES 2 E 101 ARG HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN SEQRES 3 E 101 CYS TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL SEQRES 4 E 101 ASP LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU SEQRES 5 E 101 HIS SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR SEQRES 6 E 101 LEU LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP SEQRES 7 E 101 GLU TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN SEQRES 8 E 101 PRO LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 F 8 ASP PHE ALA ASN THR PHE LEU PRO FORMUL 7 HOH *310(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 ASP A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 GLY A 151 1 15 HELIX 4 AA4 GLY A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 LEU A 180 1 6 HELIX 7 AA7 GLU A 253 GLN A 255 5 3 HELIX 8 AA8 ALA D 49 GLU D 53 5 5 HELIX 9 AA9 ASP D 56 ASN D 86 1 31 HELIX 10 AB1 ASP D 137 GLY D 151 1 15 HELIX 11 AB2 GLY D 151 GLY D 162 1 12 HELIX 12 AB3 GLY D 162 GLY D 175 1 14 HELIX 13 AB4 GLY D 175 LEU D 180 1 6 HELIX 14 AB5 GLU D 253 GLN D 255 5 3 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 TRP A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 THR A 94 VAL A 103 -1 O ILE A 95 N ALA A 11 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 ALA A 121 LEU A 126 -1 O LEU A 126 N ASP A 114 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA2 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 ASP A 223 0 SHEET 2 AA4 4 THR A 214 HIS A 219 -1 N HIS A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O THR A 258 N GLN A 218 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 8 GLU D 46 PRO D 47 0 SHEET 2 AA8 8 THR D 31 ASP D 37 -1 N ARG D 35 O GLU D 46 SHEET 3 AA8 8 ARG D 21 VAL D 28 -1 N GLY D 26 O PHE D 33 SHEET 4 AA8 8 HIS D 3 TRP D 12 -1 N THR D 10 O VAL D 23 SHEET 5 AA8 8 THR D 94 VAL D 103 -1 O VAL D 103 N HIS D 3 SHEET 6 AA8 8 LEU D 109 TYR D 118 -1 O LEU D 110 N ASP D 102 SHEET 7 AA8 8 ALA D 121 LEU D 126 -1 O LEU D 126 N ASP D 114 SHEET 8 AA8 8 TRP D 133 ALA D 135 -1 O THR D 134 N ALA D 125 SHEET 1 AA9 4 LYS D 186 PRO D 193 0 SHEET 2 AA9 4 GLU D 198 PHE D 208 -1 O TRP D 204 N HIS D 188 SHEET 3 AA9 4 PHE D 241 PRO D 250 -1 O VAL D 249 N VAL D 199 SHEET 4 AA9 4 GLU D 229 LEU D 230 -1 N GLU D 229 O ALA D 246 SHEET 1 AB1 4 LYS D 186 PRO D 193 0 SHEET 2 AB1 4 GLU D 198 PHE D 208 -1 O TRP D 204 N HIS D 188 SHEET 3 AB1 4 PHE D 241 PRO D 250 -1 O VAL D 249 N VAL D 199 SHEET 4 AB1 4 ARG D 234 PRO D 235 -1 N ARG D 234 O GLN D 242 SHEET 1 AB2 4 GLU D 222 ASP D 223 0 SHEET 2 AB2 4 THR D 214 HIS D 219 -1 N HIS D 219 O GLU D 222 SHEET 3 AB2 4 TYR D 257 GLN D 262 -1 O THR D 258 N GLN D 218 SHEET 4 AB2 4 LEU D 270 LEU D 272 -1 O LEU D 270 N VAL D 261 SHEET 1 AB3 4 LYS E 6 SER E 11 0 SHEET 2 AB3 4 ASN E 21 PHE E 30 -1 O ASN E 24 N TYR E 10 SHEET 3 AB3 4 PHE E 62 PHE E 70 -1 O TYR E 66 N CYS E 25 SHEET 4 AB3 4 GLU E 50 HIS E 51 -1 N GLU E 50 O TYR E 67 SHEET 1 AB4 4 LYS E 6 SER E 11 0 SHEET 2 AB4 4 ASN E 21 PHE E 30 -1 O ASN E 24 N TYR E 10 SHEET 3 AB4 4 PHE E 62 PHE E 70 -1 O TYR E 66 N CYS E 25 SHEET 4 AB4 4 SER E 55 PHE E 56 -1 N SER E 55 O TYR E 63 SHEET 1 AB5 4 GLU E 44 ARG E 45 0 SHEET 2 AB5 4 GLU E 36 LYS E 41 -1 N LYS E 41 O GLU E 44 SHEET 3 AB5 4 TYR E 78 ASN E 83 -1 O ALA E 79 N LEU E 40 SHEET 4 AB5 4 LYS E 91 LYS E 94 -1 O LYS E 91 N VAL E 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 101 CYS D 164 1555 1555 2.05 SSBOND 5 CYS D 203 CYS D 259 1555 1555 2.03 SSBOND 6 CYS E 25 CYS E 80 1555 1555 2.03 CISPEP 1 TYR A 209 PRO A 210 0 4.70 CISPEP 2 HIS B 31 PRO B 32 0 1.62 CISPEP 3 TYR D 209 PRO D 210 0 1.60 CISPEP 4 HIS E 31 PRO E 32 0 2.31 CRYST1 100.651 102.504 178.505 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005602 0.00000