HEADER OXIDOREDUCTASE 07-JAN-19 6J42 TITLE CRYSTAL STRUCTURE OF WILD TYPE KATB, A MANGANESE CATALASE FROM TITLE 2 ANABAENA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALR3090 PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: KATB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC SP. (STRAIN PCC 7120 / SAG 25.82 / UTEX SOURCE 3 2576); SOURCE 4 ORGANISM_TAXID: 103690; SOURCE 5 STRAIN: PCC 7120 / SAG 25.82 / UTEX 2576; SOURCE 6 GENE: ALR3090; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ENZYME, CATALASE, MANGANESE CATALASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.C.BIHANI,D.CHAKRAVARTY,A.BALLAL REVDAT 3 22-NOV-23 6J42 1 REMARK REVDAT 2 27-JAN-21 6J42 1 JRNL LINK REVDAT 1 15-JAN-20 6J42 0 JRNL AUTH D.CHAKRAVARTY,S.C.BIHANI,M.BANERJEE,A.BALLAL JRNL TITL NOVEL MOLECULAR INSIGHTS INTO THE ANTI-OXIDATIVE STRESS JRNL TITL 2 RESPONSE AND STRUCTURE-FUNCTION OF A SALT-INDUCIBLE JRNL TITL 3 CYANOBACTERIAL MN-CATALASE. JRNL REF PLANT CELL ENVIRON V. 42 2508 2019 JRNL REFN ISSN 1365-3040 JRNL PMID 30993731 JRNL DOI 10.1111/PCE.13563 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.270 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 25847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1315 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5869 - 5.1562 0.99 2953 128 0.1784 0.2211 REMARK 3 2 5.1562 - 4.1050 0.99 2772 148 0.1711 0.1683 REMARK 3 3 4.1050 - 3.5897 0.99 2737 162 0.1962 0.2454 REMARK 3 4 3.5897 - 3.2631 0.99 2712 153 0.2456 0.3094 REMARK 3 5 3.2631 - 3.0301 0.99 2709 140 0.2626 0.3263 REMARK 3 6 3.0301 - 2.8521 0.98 2670 156 0.2913 0.3385 REMARK 3 7 2.8521 - 2.7096 0.98 2673 136 0.2762 0.3408 REMARK 3 8 2.7096 - 2.5919 0.98 2657 145 0.3027 0.3703 REMARK 3 9 2.5919 - 2.4924 0.99 2649 147 0.2940 0.3736 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5315 REMARK 3 ANGLE : 0.660 7193 REMARK 3 CHIRALITY : 0.026 777 REMARK 3 PLANARITY : 0.003 943 REMARK 3 DIHEDRAL : 13.062 1925 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010261. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : RRCAT INDUS-2 REMARK 200 BEAMLINE : PX-BL21 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25862 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 19.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4R42 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, PEG 8000, CALCIUM ACETATE, REMARK 280 100 MM IMIDAZOLE, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.49000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.03500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.74500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.03500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 104.23500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.03500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.03500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.74500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.03500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.03500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 104.23500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.49000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 39620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -361.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 410 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 203 REMARK 465 GLY A 204 REMARK 465 ASN A 205 REMARK 465 GLY A 206 REMARK 465 HIS A 207 REMARK 465 ASP A 208 REMARK 465 LEU A 226 REMARK 465 GLU A 227 REMARK 465 LYS A 228 REMARK 465 HIS A 229 REMARK 465 SER A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 SER B 202 REMARK 465 ASN B 203 REMARK 465 GLY B 204 REMARK 465 ASN B 205 REMARK 465 GLY B 206 REMARK 465 HIS B 207 REMARK 465 LEU B 226 REMARK 465 GLU B 227 REMARK 465 LYS B 228 REMARK 465 HIS B 229 REMARK 465 SER B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 465 ASN C 203 REMARK 465 GLY C 204 REMARK 465 ASN C 205 REMARK 465 GLY C 206 REMARK 465 HIS C 207 REMARK 465 ASP C 208 REMARK 465 LEU C 226 REMARK 465 GLU C 227 REMARK 465 LYS C 228 REMARK 465 HIS C 229 REMARK 465 SER C 230 REMARK 465 HIS C 231 REMARK 465 HIS C 232 REMARK 465 HIS C 233 REMARK 465 HIS C 234 REMARK 465 HIS C 235 REMARK 465 HIS C 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 8 -178.47 -67.48 REMARK 500 PHE A 29 -67.75 -106.09 REMARK 500 ASP A 191 -147.26 -96.12 REMARK 500 ASN A 214 38.03 -145.61 REMARK 500 PHE B 29 -63.04 -95.15 REMARK 500 ASP B 84 6.84 -68.67 REMARK 500 ASP B 191 -131.52 -104.06 REMARK 500 THR B 193 30.21 -95.09 REMARK 500 ALA B 195 50.03 -100.74 REMARK 500 SER B 215 -159.97 -133.98 REMARK 500 PHE C 29 -64.18 -100.38 REMARK 500 VAL C 83 19.66 -143.14 REMARK 500 ASP C 149 -166.10 -120.40 REMARK 500 ASN C 214 28.68 -141.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 35 OE1 REMARK 620 2 GLU A 35 OE2 51.7 REMARK 620 3 GLU A 65 OE1 80.5 131.8 REMARK 620 4 HIS A 68 ND1 101.9 102.0 92.4 REMARK 620 5 GLU A 163 OE2 139.5 90.8 131.6 100.5 REMARK 620 6 HOH A 412 O 75.5 81.9 80.3 172.6 85.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASP A 56 OD2 50.9 REMARK 620 3 ASP A 60 OD1 100.4 114.7 REMARK 620 4 ASP A 60 OD2 96.1 73.0 50.8 REMARK 620 5 ASN A 199 OD1 70.5 50.1 65.9 26.9 REMARK 620 6 SER A 201 O 71.5 53.4 62.3 25.1 3.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 65 OE2 REMARK 620 2 GLU A 133 OE1 144.5 REMARK 620 3 GLU A 133 OE2 90.9 55.1 REMARK 620 4 GLU A 163 OE1 129.2 79.7 133.2 REMARK 620 5 HIS A 166 ND1 86.2 104.6 94.5 109.3 REMARK 620 6 HOH A 402 O 92.5 77.3 87.0 70.4 178.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 107 O REMARK 620 2 GLN B 107 O 61.9 REMARK 620 3 HOH B 409 O 68.0 6.6 REMARK 620 4 GLN C 107 O 102.3 67.1 66.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 109 OD1 REMARK 620 2 ASN B 109 OD1 134.0 REMARK 620 3 ASN C 109 OD1 79.1 130.9 REMARK 620 4 HOH C 413 O 141.8 7.8 126.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 35 OE1 REMARK 620 2 GLU B 65 OE1 86.0 REMARK 620 3 HIS B 68 ND1 111.8 87.2 REMARK 620 4 GLU B 163 OE2 116.9 140.0 110.6 REMARK 620 5 HOH B 411 O 72.5 78.4 164.8 78.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 56 OD1 REMARK 620 2 ASP B 56 OD2 47.1 REMARK 620 3 ASP B 60 OD1 87.3 102.2 REMARK 620 4 ASP B 60 OD2 86.4 67.3 47.4 REMARK 620 5 ASN C 199 OD1 150.4 162.5 84.1 107.8 REMARK 620 6 SER C 201 O 76.4 123.2 64.7 110.4 74.3 REMARK 620 7 HOH C 412 O 79.1 94.4 141.6 161.6 90.4 77.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 65 OE2 REMARK 620 2 GLU B 133 OE2 141.8 REMARK 620 3 GLU B 163 OE1 124.4 88.2 REMARK 620 4 HIS B 166 ND1 89.7 98.9 107.9 REMARK 620 5 HOH B 412 O 82.2 80.0 87.3 164.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 199 OD1 REMARK 620 2 SER B 201 O 76.1 REMARK 620 3 ASP C 56 OD1 156.2 80.1 REMARK 620 4 ASP C 56 OD2 149.4 128.2 51.4 REMARK 620 5 ASP C 60 OD1 84.7 70.5 88.8 118.7 REMARK 620 6 ASP C 60 OD2 102.2 117.5 90.0 83.4 47.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 35 OE1 REMARK 620 2 GLU C 35 OE2 52.4 REMARK 620 3 GLU C 65 OE2 77.0 129.1 REMARK 620 4 HIS C 68 ND1 100.5 104.6 86.8 REMARK 620 5 GLU C 163 OE2 120.5 76.9 136.8 122.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 65 OE1 REMARK 620 2 GLU C 133 OE1 154.7 REMARK 620 3 GLU C 133 OE2 100.9 57.1 REMARK 620 4 GLU C 163 OE1 113.3 88.4 145.3 REMARK 620 5 HIS C 166 ND1 86.6 106.3 95.5 92.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 303 DBREF 6J42 A 1 230 UNP Q8YSJ5 Q8YSJ5_NOSS1 1 230 DBREF 6J42 B 1 230 UNP Q8YSJ5 Q8YSJ5_NOSS1 1 230 DBREF 6J42 C 1 230 UNP Q8YSJ5 Q8YSJ5_NOSS1 1 230 SEQADV 6J42 HIS A 231 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS A 232 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS A 233 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS A 234 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS A 235 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS A 236 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 231 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 232 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 233 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 234 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 235 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS B 236 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 231 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 232 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 233 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 234 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 235 UNP Q8YSJ5 EXPRESSION TAG SEQADV 6J42 HIS C 236 UNP Q8YSJ5 EXPRESSION TAG SEQRES 1 A 236 MET PHE PHE HIS LYS LYS GLU PRO ILE HIS VAL VAL ASN SEQRES 2 A 236 ILE GLY GLU ALA ASN PRO ARG PHE ALA GLN LEU LEU LEU SEQRES 3 A 236 GLU GLN PHE GLY GLY ALA THR GLY GLU LEU SER ALA ALA SEQRES 4 A 236 LEU GLN TYR TRP VAL GLN SER PHE HIS VAL GLU ASN ALA SEQRES 5 A 236 GLY ILE LYS ASP MET LEU GLN ASP ILE ALA ILE GLU GLU SEQRES 6 A 236 PHE SER HIS LEU GLU MET VAL GLY LYS LEU ILE GLU ALA SEQRES 7 A 236 HIS THR LYS ASN VAL ASP GLN THR GLU ALA TYR LYS SER SEQRES 8 A 236 THR LEU PHE ALA VAL ARG GLY MET GLY PRO HIS PHE LEU SEQRES 9 A 236 ASP SER GLN GLY ASN ALA TRP THR ALA SER TYR LEU ASN SEQRES 10 A 236 GLU GLY GLY ASP VAL VAL ARG ASP LEU ARG ALA ASN ILE SEQRES 11 A 236 ALA ALA GLU ALA GLY ALA ARG GLN THR TYR GLU GLU LEU SEQRES 12 A 236 ILE LYS LEU SER PRO ASP GLU GLY THR LYS GLN THR LEU SEQRES 13 A 236 VAL HIS LEU LEU THR ARG GLU ILE SER HIS THR GLN MET SEQRES 14 A 236 PHE MET LYS ALA LEU ASP SER LEU GLY LYS LEU THR ASP SEQRES 15 A 236 PRO PHE PHE GLY ASN VAL GLN PRO ASP GLU THR VAL ALA SEQRES 16 A 236 LEU TYR TYR ASN LEU SER SER ASN GLY ASN GLY HIS ASP SEQRES 17 A 236 GLU ARG GLY PRO TRP ASN SER GLU PRO ALA PHE LYS TYR SEQRES 18 A 236 VAL ALA ASN PRO LEU GLU LYS HIS SER HIS HIS HIS HIS SEQRES 19 A 236 HIS HIS SEQRES 1 B 236 MET PHE PHE HIS LYS LYS GLU PRO ILE HIS VAL VAL ASN SEQRES 2 B 236 ILE GLY GLU ALA ASN PRO ARG PHE ALA GLN LEU LEU LEU SEQRES 3 B 236 GLU GLN PHE GLY GLY ALA THR GLY GLU LEU SER ALA ALA SEQRES 4 B 236 LEU GLN TYR TRP VAL GLN SER PHE HIS VAL GLU ASN ALA SEQRES 5 B 236 GLY ILE LYS ASP MET LEU GLN ASP ILE ALA ILE GLU GLU SEQRES 6 B 236 PHE SER HIS LEU GLU MET VAL GLY LYS LEU ILE GLU ALA SEQRES 7 B 236 HIS THR LYS ASN VAL ASP GLN THR GLU ALA TYR LYS SER SEQRES 8 B 236 THR LEU PHE ALA VAL ARG GLY MET GLY PRO HIS PHE LEU SEQRES 9 B 236 ASP SER GLN GLY ASN ALA TRP THR ALA SER TYR LEU ASN SEQRES 10 B 236 GLU GLY GLY ASP VAL VAL ARG ASP LEU ARG ALA ASN ILE SEQRES 11 B 236 ALA ALA GLU ALA GLY ALA ARG GLN THR TYR GLU GLU LEU SEQRES 12 B 236 ILE LYS LEU SER PRO ASP GLU GLY THR LYS GLN THR LEU SEQRES 13 B 236 VAL HIS LEU LEU THR ARG GLU ILE SER HIS THR GLN MET SEQRES 14 B 236 PHE MET LYS ALA LEU ASP SER LEU GLY LYS LEU THR ASP SEQRES 15 B 236 PRO PHE PHE GLY ASN VAL GLN PRO ASP GLU THR VAL ALA SEQRES 16 B 236 LEU TYR TYR ASN LEU SER SER ASN GLY ASN GLY HIS ASP SEQRES 17 B 236 GLU ARG GLY PRO TRP ASN SER GLU PRO ALA PHE LYS TYR SEQRES 18 B 236 VAL ALA ASN PRO LEU GLU LYS HIS SER HIS HIS HIS HIS SEQRES 19 B 236 HIS HIS SEQRES 1 C 236 MET PHE PHE HIS LYS LYS GLU PRO ILE HIS VAL VAL ASN SEQRES 2 C 236 ILE GLY GLU ALA ASN PRO ARG PHE ALA GLN LEU LEU LEU SEQRES 3 C 236 GLU GLN PHE GLY GLY ALA THR GLY GLU LEU SER ALA ALA SEQRES 4 C 236 LEU GLN TYR TRP VAL GLN SER PHE HIS VAL GLU ASN ALA SEQRES 5 C 236 GLY ILE LYS ASP MET LEU GLN ASP ILE ALA ILE GLU GLU SEQRES 6 C 236 PHE SER HIS LEU GLU MET VAL GLY LYS LEU ILE GLU ALA SEQRES 7 C 236 HIS THR LYS ASN VAL ASP GLN THR GLU ALA TYR LYS SER SEQRES 8 C 236 THR LEU PHE ALA VAL ARG GLY MET GLY PRO HIS PHE LEU SEQRES 9 C 236 ASP SER GLN GLY ASN ALA TRP THR ALA SER TYR LEU ASN SEQRES 10 C 236 GLU GLY GLY ASP VAL VAL ARG ASP LEU ARG ALA ASN ILE SEQRES 11 C 236 ALA ALA GLU ALA GLY ALA ARG GLN THR TYR GLU GLU LEU SEQRES 12 C 236 ILE LYS LEU SER PRO ASP GLU GLY THR LYS GLN THR LEU SEQRES 13 C 236 VAL HIS LEU LEU THR ARG GLU ILE SER HIS THR GLN MET SEQRES 14 C 236 PHE MET LYS ALA LEU ASP SER LEU GLY LYS LEU THR ASP SEQRES 15 C 236 PRO PHE PHE GLY ASN VAL GLN PRO ASP GLU THR VAL ALA SEQRES 16 C 236 LEU TYR TYR ASN LEU SER SER ASN GLY ASN GLY HIS ASP SEQRES 17 C 236 GLU ARG GLY PRO TRP ASN SER GLU PRO ALA PHE LYS TYR SEQRES 18 C 236 VAL ALA ASN PRO LEU GLU LYS HIS SER HIS HIS HIS HIS SEQRES 19 C 236 HIS HIS HET MN A 301 1 HET MN A 302 1 HET CA A 303 1 HET CA A 304 1 HET PG4 A 305 13 HET MN B 301 1 HET MN B 302 1 HET CA B 303 1 HET CA B 304 1 HET MN C 301 1 HET MN C 302 1 HET CA C 303 1 HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 4 MN 6(MN 2+) FORMUL 6 CA 5(CA 2+) FORMUL 8 PG4 C8 H18 O5 FORMUL 16 HOH *70(H2 O) HELIX 1 AA1 ASN A 18 LEU A 26 1 9 HELIX 2 AA2 LEU A 26 GLY A 31 1 6 HELIX 3 AA3 GLY A 34 PHE A 47 1 14 HELIX 4 AA4 ASN A 51 HIS A 79 1 29 HELIX 5 AA5 THR A 86 SER A 91 1 6 HELIX 6 AA6 LEU A 93 GLY A 98 1 6 HELIX 7 AA7 THR A 112 LEU A 116 5 5 HELIX 8 AA8 ASP A 121 LYS A 145 1 25 HELIX 9 AA9 ASP A 149 LEU A 177 1 29 HELIX 10 AB1 GLY A 211 SER A 215 5 5 HELIX 11 AB2 ASN B 18 LEU B 26 1 9 HELIX 12 AB3 GLY B 34 SER B 46 1 13 HELIX 13 AB4 ASN B 51 HIS B 79 1 29 HELIX 14 AB5 ALA B 88 THR B 92 5 5 HELIX 15 AB6 LEU B 93 GLY B 98 1 6 HELIX 16 AB7 THR B 112 LEU B 116 5 5 HELIX 17 AB8 ASP B 121 LEU B 146 1 26 HELIX 18 AB9 ASP B 149 SER B 176 1 28 HELIX 19 AC1 ASN C 18 LEU C 26 1 9 HELIX 20 AC2 GLU C 27 PHE C 29 5 3 HELIX 21 AC3 GLY C 34 PHE C 47 1 14 HELIX 22 AC4 ASN C 51 HIS C 79 1 29 HELIX 23 AC5 THR C 86 SER C 91 1 6 HELIX 24 AC6 LEU C 93 GLY C 98 1 6 HELIX 25 AC7 THR C 112 LEU C 116 5 5 HELIX 26 AC8 ASP C 121 LYS C 145 1 25 HELIX 27 AC9 ASP C 149 SER C 176 1 28 HELIX 28 AD1 ASP C 191 VAL C 194 5 4 SHEET 1 AA1 2 PHE A 2 HIS A 4 0 SHEET 2 AA1 2 PHE B 2 HIS B 4 -1 O PHE B 3 N PHE A 3 SHEET 1 AA2 2 LEU A 196 TYR A 198 0 SHEET 2 AA2 2 LYS A 220 VAL A 222 1 O VAL A 222 N TYR A 197 SHEET 1 AA3 2 LEU B 196 TYR B 198 0 SHEET 2 AA3 2 LYS B 220 VAL B 222 1 O VAL B 222 N TYR B 197 SHEET 1 AA4 2 LEU C 196 TYR C 198 0 SHEET 2 AA4 2 LYS C 220 VAL C 222 1 O VAL C 222 N TYR C 197 LINK OE1 GLU A 35 MN MN A 301 1555 1555 2.21 LINK OE2 GLU A 35 MN MN A 301 1555 1555 2.71 LINK OD1 ASP A 56 CA CA A 303 1555 1555 2.36 LINK OD2 ASP A 56 CA CA A 303 1555 1555 2.69 LINK OD1 ASP A 60 CA CA A 303 1555 1555 2.65 LINK OD2 ASP A 60 CA CA A 303 1555 1555 2.43 LINK OE1 GLU A 65 MN MN A 301 1555 1555 2.15 LINK OE2 GLU A 65 MN MN A 302 1555 1555 2.06 LINK ND1 HIS A 68 MN MN A 301 1555 1555 2.54 LINK O GLN A 107 CA CA A 304 1555 1555 2.42 LINK OD1 ASN A 109 CA CA B 303 1555 7555 2.78 LINK OE1 GLU A 133 MN MN A 302 1555 1555 2.33 LINK OE2 GLU A 133 MN MN A 302 1555 1555 2.41 LINK OE2 GLU A 163 MN MN A 301 1555 1555 2.30 LINK OE1 GLU A 163 MN MN A 302 1555 1555 1.97 LINK ND1 HIS A 166 MN MN A 302 1555 1555 2.29 LINK OD1 ASN A 199 CA CA A 303 1555 7555 2.33 LINK O SER A 201 CA CA A 303 1555 7555 2.59 LINK MN MN A 301 O HOH A 412 1555 1555 2.37 LINK MN MN A 302 O HOH A 402 1555 1555 2.30 LINK CA CA A 304 O GLN B 107 7555 1555 2.48 LINK CA CA A 304 O HOH B 409 1555 7555 2.90 LINK CA CA A 304 O GLN C 107 1555 1555 2.49 LINK OE1 GLU B 35 MN MN B 301 1555 1555 2.07 LINK OD1 ASP B 56 CA CA B 304 1555 1555 2.46 LINK OD2 ASP B 56 CA CA B 304 1555 1555 2.94 LINK OD1 ASP B 60 CA CA B 304 1555 1555 2.84 LINK OD2 ASP B 60 CA CA B 304 1555 1555 2.60 LINK OE1 GLU B 65 MN MN B 301 1555 1555 1.98 LINK OE2 GLU B 65 MN MN B 302 1555 1555 2.03 LINK ND1 HIS B 68 MN MN B 301 1555 1555 2.32 LINK OD1 ASN B 109 CA CA B 303 1555 1555 2.70 LINK OE2 GLU B 133 MN MN B 302 1555 1555 1.86 LINK OE2 GLU B 163 MN MN B 301 1555 1555 2.43 LINK OE1 GLU B 163 MN MN B 302 1555 1555 1.99 LINK ND1 HIS B 166 MN MN B 302 1555 1555 2.34 LINK OD1 ASN B 199 CA CA C 303 1555 1555 2.46 LINK O SER B 201 CA CA C 303 1555 1555 2.44 LINK MN MN B 301 O HOH B 411 1555 1555 2.40 LINK MN MN B 302 O HOH B 412 1555 1555 2.26 LINK CA CA B 303 OD1 ASN C 109 7555 1555 2.50 LINK CA CA B 303 O HOH C 413 1555 7555 2.51 LINK CA CA B 304 OD1 ASN C 199 1555 1555 2.36 LINK CA CA B 304 O SER C 201 1555 1555 2.56 LINK CA CA B 304 O HOH C 412 1555 1555 2.77 LINK OE1 GLU C 35 MN MN C 301 1555 1555 2.36 LINK OE2 GLU C 35 MN MN C 301 1555 1555 2.60 LINK OD1 ASP C 56 CA CA C 303 1555 1555 2.54 LINK OD2 ASP C 56 CA CA C 303 1555 1555 2.52 LINK OD1 ASP C 60 CA CA C 303 1555 1555 2.79 LINK OD2 ASP C 60 CA CA C 303 1555 1555 2.66 LINK OE2 GLU C 65 MN MN C 301 1555 1555 2.11 LINK OE1 GLU C 65 MN MN C 302 1555 1555 2.02 LINK ND1 HIS C 68 MN MN C 301 1555 1555 2.44 LINK OE1 GLU C 133 MN MN C 302 1555 1555 2.35 LINK OE2 GLU C 133 MN MN C 302 1555 1555 2.22 LINK OE2 GLU C 163 MN MN C 301 1555 1555 2.06 LINK OE1 GLU C 163 MN MN C 302 1555 1555 1.94 LINK ND1 HIS C 166 MN MN C 302 1555 1555 2.47 CISPEP 1 GLU A 216 PRO A 217 0 3.97 CISPEP 2 GLU B 216 PRO B 217 0 -3.14 CISPEP 3 GLU C 216 PRO C 217 0 3.10 SITE 1 AC1 5 GLU A 35 GLU A 65 HIS A 68 GLU A 163 SITE 2 AC1 5 HOH A 412 SITE 1 AC2 5 GLU A 65 GLU A 133 GLU A 163 HIS A 166 SITE 2 AC2 5 HOH A 402 SITE 1 AC3 4 ASP A 56 ASP A 60 ASN A 199 SER A 201 SITE 1 AC4 4 GLN A 107 GLN B 107 HOH B 409 GLN C 107 SITE 1 AC5 5 ASN A 18 ARG A 20 GLN A 23 SER A 91 SITE 2 AC5 5 LYS B 90 SITE 1 AC6 5 GLU B 35 GLU B 65 HIS B 68 GLU B 163 SITE 2 AC6 5 HOH B 411 SITE 1 AC7 5 GLU B 65 GLU B 133 GLU B 163 HIS B 166 SITE 2 AC7 5 HOH B 412 SITE 1 AC8 4 ASN A 109 ASN B 109 ASN C 109 HOH C 413 SITE 1 AC9 5 ASP B 56 ASP B 60 ASN C 199 SER C 201 SITE 2 AC9 5 HOH C 412 SITE 1 AD1 5 GLU C 35 GLU C 65 HIS C 68 GLU C 163 SITE 2 AD1 5 HOH C 403 SITE 1 AD2 4 GLU C 65 GLU C 133 GLU C 163 HIS C 166 SITE 1 AD3 4 ASN B 199 SER B 201 ASP C 56 ASP C 60 CRYST1 102.070 102.070 138.980 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009797 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007195 0.00000