data_6J4R # _entry.id 6J4R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6J4R pdb_00006j4r 10.2210/pdb6j4r/pdb WWPDB D_1300010467 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-24 2 'Structure model' 1 1 2019-07-31 3 'Structure model' 1 2 2019-11-20 4 'Structure model' 1 3 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' reflns_shell 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_ISSN' 3 2 'Structure model' '_citation.journal_volume' 4 2 'Structure model' '_citation.page_first' 5 2 'Structure model' '_citation.page_last' 6 2 'Structure model' '_citation.title' 7 3 'Structure model' '_reflns_shell.Rmerge_I_obs' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6J4R _pdbx_database_status.recvd_initial_deposition_date 2019-01-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jiang, M.Q.' 1 ? 'Sun, L.F.' 2 ? 'Isupov, M.N.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Febs J.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1742-464X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 286 _citation.language ? _citation.page_first 2809 _citation.page_last 2821 _citation.title 'Structural basis for the Target DNA recognition and binding by the MYB domain of phosphate starvation response 1.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/febs.14846 _citation.pdbx_database_id_PubMed 30974511 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jiang, M.' 1 ? primary 'Sun, L.' 2 ? primary 'Isupov, M.N.' 3 ? primary 'Littlechild, J.A.' 4 ? primary 'Wu, X.' 5 ? primary 'Wang, Q.' 6 ? primary 'Wang, Q.' 7 ? primary 'Yang, W.' 8 ? primary 'Wu, Y.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein PHOSPHATE STARVATION RESPONSE 1' 6697.832 4 ? ? 'MYB domain' ? 2 polymer syn ;DNA (5'-D(*CP*CP*AP*TP*AP*TP*AP*TP*GP*AP*C)-3') ; 3317.199 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*TP*CP*AP*TP*AP*TP*AP*TP*GP*G)-3') ; 3388.233 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*GP*GP*TP*AP*TP*AP*TP*AP*CP*TP*G)-3') ; 3388.233 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(*CP*AP*GP*TP*AP*TP*AP*TP*AP*CP*C)-3') ; 3317.199 1 ? ? ? ? 6 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name AtPHR1 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARY KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARY A,B,C,D ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DT)(DA)(DT)(DA)(DT)(DG)(DA)(DC)' CCATATATGAC F ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DA)(DT)(DA)(DT)(DA)(DT)(DG)(DG)' GTCATATATGG E ? 4 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DT)(DA)(DT)(DA)(DC)(DT)(DG)' GGTATATACTG X ? 5 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DT)(DA)(DT)(DA)(DT)(DA)(DC)(DC)' CAGTATATACC Y ? # _pdbx_entity_nonpoly.entity_id 6 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ALA n 1 3 ARG n 1 4 MET n 1 5 ARG n 1 6 TRP n 1 7 THR n 1 8 PRO n 1 9 GLU n 1 10 LEU n 1 11 HIS n 1 12 GLU n 1 13 ALA n 1 14 PHE n 1 15 VAL n 1 16 GLU n 1 17 ALA n 1 18 VAL n 1 19 ASN n 1 20 SER n 1 21 LEU n 1 22 GLY n 1 23 GLY n 1 24 SER n 1 25 GLU n 1 26 ARG n 1 27 ALA n 1 28 THR n 1 29 PRO n 1 30 LYS n 1 31 GLY n 1 32 VAL n 1 33 LEU n 1 34 LYS n 1 35 ILE n 1 36 MET n 1 37 LYS n 1 38 VAL n 1 39 GLU n 1 40 GLY n 1 41 LEU n 1 42 THR n 1 43 ILE n 1 44 TYR n 1 45 HIS n 1 46 VAL n 1 47 LYS n 1 48 SER n 1 49 HIS n 1 50 LEU n 1 51 GLN n 1 52 LYS n 1 53 TYR n 1 54 ARG n 1 55 THR n 1 56 ALA n 1 57 ARG n 1 58 TYR n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DT n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DT n 2 9 DG n 2 10 DA n 2 11 DC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DA n 3 5 DT n 3 6 DA n 3 7 DT n 3 8 DA n 3 9 DT n 3 10 DG n 3 11 DG n 4 1 DG n 4 2 DG n 4 3 DT n 4 4 DA n 4 5 DT n 4 6 DA n 4 7 DT n 4 8 DA n 4 9 DC n 4 10 DT n 4 11 DG n 5 1 DC n 5 2 DA n 5 3 DG n 5 4 DT n 5 5 DA n 5 6 DT n 5 7 DA n 5 8 DT n 5 9 DA n 5 10 DC n 5 11 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 58 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PHR1, At4g28610, T5F17.60' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 11 'synthetic construct' ? 32630 ? 3 1 sample 1 11 'synthetic construct' ? 32630 ? 4 1 sample 1 11 'synthetic construct' ? 32630 ? 5 1 sample 1 11 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 225 225 LYS LYS A . n A 1 2 ALA 2 226 226 ALA ALA A . n A 1 3 ARG 3 227 227 ARG ARG A . n A 1 4 MET 4 228 228 MET MET A . n A 1 5 ARG 5 229 229 ARG ARG A . n A 1 6 TRP 6 230 230 TRP TRP A . n A 1 7 THR 7 231 231 THR THR A . n A 1 8 PRO 8 232 232 PRO PRO A . n A 1 9 GLU 9 233 233 GLU GLU A . n A 1 10 LEU 10 234 234 LEU LEU A . n A 1 11 HIS 11 235 235 HIS HIS A . n A 1 12 GLU 12 236 236 GLU GLU A . n A 1 13 ALA 13 237 237 ALA ALA A . n A 1 14 PHE 14 238 238 PHE PHE A . n A 1 15 VAL 15 239 239 VAL VAL A . n A 1 16 GLU 16 240 240 GLU GLU A . n A 1 17 ALA 17 241 241 ALA ALA A . n A 1 18 VAL 18 242 242 VAL VAL A . n A 1 19 ASN 19 243 243 ASN ASN A . n A 1 20 SER 20 244 244 SER SER A . n A 1 21 LEU 21 245 245 LEU LEU A . n A 1 22 GLY 22 246 246 GLY GLY A . n A 1 23 GLY 23 247 247 GLY GLY A . n A 1 24 SER 24 248 248 SER SER A . n A 1 25 GLU 25 249 249 GLU GLU A . n A 1 26 ARG 26 250 250 ARG ARG A . n A 1 27 ALA 27 251 251 ALA ALA A . n A 1 28 THR 28 252 252 THR THR A . n A 1 29 PRO 29 253 253 PRO PRO A . n A 1 30 LYS 30 254 254 LYS LYS A . n A 1 31 GLY 31 255 255 GLY GLY A . n A 1 32 VAL 32 256 256 VAL VAL A . n A 1 33 LEU 33 257 257 LEU LEU A . n A 1 34 LYS 34 258 258 LYS LYS A . n A 1 35 ILE 35 259 259 ILE ILE A . n A 1 36 MET 36 260 260 MET MET A . n A 1 37 LYS 37 261 261 LYS LYS A . n A 1 38 VAL 38 262 262 VAL VAL A . n A 1 39 GLU 39 263 263 GLU GLU A . n A 1 40 GLY 40 264 264 GLY GLY A . n A 1 41 LEU 41 265 265 LEU LEU A . n A 1 42 THR 42 266 266 THR THR A . n A 1 43 ILE 43 267 267 ILE ILE A . n A 1 44 TYR 44 268 268 TYR TYR A . n A 1 45 HIS 45 269 269 HIS HIS A . n A 1 46 VAL 46 270 270 VAL VAL A . n A 1 47 LYS 47 271 271 LYS LYS A . n A 1 48 SER 48 272 272 SER SER A . n A 1 49 HIS 49 273 273 HIS HIS A . n A 1 50 LEU 50 274 274 LEU LEU A . n A 1 51 GLN 51 275 275 GLN GLN A . n A 1 52 LYS 52 276 276 LYS LYS A . n A 1 53 TYR 53 277 277 TYR TYR A . n A 1 54 ARG 54 278 278 ARG ARG A . n A 1 55 THR 55 279 279 THR THR A . n A 1 56 ALA 56 280 280 ALA ALA A . n A 1 57 ARG 57 281 281 ARG ARG A . n A 1 58 TYR 58 282 282 TYR TYR A . n B 1 1 LYS 1 225 ? ? ? B . n B 1 2 ALA 2 226 226 ALA ALA B . n B 1 3 ARG 3 227 227 ARG ARG B . n B 1 4 MET 4 228 228 MET MET B . n B 1 5 ARG 5 229 229 ARG ARG B . n B 1 6 TRP 6 230 230 TRP TRP B . n B 1 7 THR 7 231 231 THR THR B . n B 1 8 PRO 8 232 232 PRO PRO B . n B 1 9 GLU 9 233 233 GLU GLU B . n B 1 10 LEU 10 234 234 LEU LEU B . n B 1 11 HIS 11 235 235 HIS HIS B . n B 1 12 GLU 12 236 236 GLU GLU B . n B 1 13 ALA 13 237 237 ALA ALA B . n B 1 14 PHE 14 238 238 PHE PHE B . n B 1 15 VAL 15 239 239 VAL VAL B . n B 1 16 GLU 16 240 240 GLU GLU B . n B 1 17 ALA 17 241 241 ALA ALA B . n B 1 18 VAL 18 242 242 VAL VAL B . n B 1 19 ASN 19 243 243 ASN ASN B . n B 1 20 SER 20 244 244 SER SER B . n B 1 21 LEU 21 245 245 LEU LEU B . n B 1 22 GLY 22 246 246 GLY GLY B . n B 1 23 GLY 23 247 247 GLY GLY B . n B 1 24 SER 24 248 248 SER SER B . n B 1 25 GLU 25 249 249 GLU GLU B . n B 1 26 ARG 26 250 250 ARG ARG B . n B 1 27 ALA 27 251 251 ALA ALA B . n B 1 28 THR 28 252 252 THR THR B . n B 1 29 PRO 29 253 253 PRO PRO B . n B 1 30 LYS 30 254 254 LYS LYS B . n B 1 31 GLY 31 255 255 GLY GLY B . n B 1 32 VAL 32 256 256 VAL VAL B . n B 1 33 LEU 33 257 257 LEU LEU B . n B 1 34 LYS 34 258 258 LYS LYS B . n B 1 35 ILE 35 259 259 ILE ILE B . n B 1 36 MET 36 260 260 MET MET B . n B 1 37 LYS 37 261 261 LYS LYS B . n B 1 38 VAL 38 262 262 VAL VAL B . n B 1 39 GLU 39 263 263 GLU GLU B . n B 1 40 GLY 40 264 264 GLY GLY B . n B 1 41 LEU 41 265 265 LEU LEU B . n B 1 42 THR 42 266 266 THR THR B . n B 1 43 ILE 43 267 267 ILE ILE B . n B 1 44 TYR 44 268 268 TYR TYR B . n B 1 45 HIS 45 269 269 HIS HIS B . n B 1 46 VAL 46 270 270 VAL VAL B . n B 1 47 LYS 47 271 271 LYS LYS B . n B 1 48 SER 48 272 272 SER SER B . n B 1 49 HIS 49 273 273 HIS HIS B . n B 1 50 LEU 50 274 274 LEU LEU B . n B 1 51 GLN 51 275 275 GLN GLN B . n B 1 52 LYS 52 276 276 LYS LYS B . n B 1 53 TYR 53 277 277 TYR TYR B . n B 1 54 ARG 54 278 278 ARG ARG B . n B 1 55 THR 55 279 279 THR THR B . n B 1 56 ALA 56 280 280 ALA ALA B . n B 1 57 ARG 57 281 281 ARG ARG B . n B 1 58 TYR 58 282 282 TYR TYR B . n C 1 1 LYS 1 225 ? ? ? C . n C 1 2 ALA 2 226 226 ALA ALA C . n C 1 3 ARG 3 227 227 ARG ARG C . n C 1 4 MET 4 228 228 MET MET C . n C 1 5 ARG 5 229 229 ARG ARG C . n C 1 6 TRP 6 230 230 TRP TRP C . n C 1 7 THR 7 231 231 THR THR C . n C 1 8 PRO 8 232 232 PRO PRO C . n C 1 9 GLU 9 233 233 GLU GLU C . n C 1 10 LEU 10 234 234 LEU LEU C . n C 1 11 HIS 11 235 235 HIS HIS C . n C 1 12 GLU 12 236 236 GLU GLU C . n C 1 13 ALA 13 237 237 ALA ALA C . n C 1 14 PHE 14 238 238 PHE PHE C . n C 1 15 VAL 15 239 239 VAL VAL C . n C 1 16 GLU 16 240 240 GLU GLU C . n C 1 17 ALA 17 241 241 ALA ALA C . n C 1 18 VAL 18 242 242 VAL VAL C . n C 1 19 ASN 19 243 243 ASN ASN C . n C 1 20 SER 20 244 244 SER SER C . n C 1 21 LEU 21 245 245 LEU LEU C . n C 1 22 GLY 22 246 246 GLY GLY C . n C 1 23 GLY 23 247 247 GLY GLY C . n C 1 24 SER 24 248 248 SER SER C . n C 1 25 GLU 25 249 249 GLU GLU C . n C 1 26 ARG 26 250 250 ARG ARG C . n C 1 27 ALA 27 251 251 ALA ALA C . n C 1 28 THR 28 252 252 THR THR C . n C 1 29 PRO 29 253 253 PRO PRO C . n C 1 30 LYS 30 254 254 LYS LYS C . n C 1 31 GLY 31 255 255 GLY GLY C . n C 1 32 VAL 32 256 256 VAL VAL C . n C 1 33 LEU 33 257 257 LEU LEU C . n C 1 34 LYS 34 258 258 LYS LYS C . n C 1 35 ILE 35 259 259 ILE ILE C . n C 1 36 MET 36 260 260 MET MET C . n C 1 37 LYS 37 261 261 LYS LYS C . n C 1 38 VAL 38 262 262 VAL VAL C . n C 1 39 GLU 39 263 263 GLU GLU C . n C 1 40 GLY 40 264 264 GLY GLY C . n C 1 41 LEU 41 265 265 LEU LEU C . n C 1 42 THR 42 266 266 THR THR C . n C 1 43 ILE 43 267 267 ILE ILE C . n C 1 44 TYR 44 268 268 TYR TYR C . n C 1 45 HIS 45 269 269 HIS HIS C . n C 1 46 VAL 46 270 270 VAL VAL C . n C 1 47 LYS 47 271 271 LYS LYS C . n C 1 48 SER 48 272 272 SER SER C . n C 1 49 HIS 49 273 273 HIS HIS C . n C 1 50 LEU 50 274 274 LEU LEU C . n C 1 51 GLN 51 275 275 GLN GLN C . n C 1 52 LYS 52 276 276 LYS LYS C . n C 1 53 TYR 53 277 277 TYR TYR C . n C 1 54 ARG 54 278 278 ARG ARG C . n C 1 55 THR 55 279 279 THR THR C . n C 1 56 ALA 56 280 280 ALA ALA C . n C 1 57 ARG 57 281 ? ? ? C . n C 1 58 TYR 58 282 ? ? ? C . n D 1 1 LYS 1 225 225 LYS LYS D . n D 1 2 ALA 2 226 226 ALA ALA D . n D 1 3 ARG 3 227 227 ARG ARG D . n D 1 4 MET 4 228 228 MET MET D . n D 1 5 ARG 5 229 229 ARG ARG D . n D 1 6 TRP 6 230 230 TRP TRP D . n D 1 7 THR 7 231 231 THR THR D . n D 1 8 PRO 8 232 232 PRO PRO D . n D 1 9 GLU 9 233 233 GLU GLU D . n D 1 10 LEU 10 234 234 LEU LEU D . n D 1 11 HIS 11 235 235 HIS HIS D . n D 1 12 GLU 12 236 236 GLU GLU D . n D 1 13 ALA 13 237 237 ALA ALA D . n D 1 14 PHE 14 238 238 PHE PHE D . n D 1 15 VAL 15 239 239 VAL VAL D . n D 1 16 GLU 16 240 240 GLU GLU D . n D 1 17 ALA 17 241 241 ALA ALA D . n D 1 18 VAL 18 242 242 VAL VAL D . n D 1 19 ASN 19 243 243 ASN ASN D . n D 1 20 SER 20 244 244 SER SER D . n D 1 21 LEU 21 245 245 LEU LEU D . n D 1 22 GLY 22 246 246 GLY GLY D . n D 1 23 GLY 23 247 247 GLY GLY D . n D 1 24 SER 24 248 248 SER SER D . n D 1 25 GLU 25 249 249 GLU GLU D . n D 1 26 ARG 26 250 250 ARG ARG D . n D 1 27 ALA 27 251 251 ALA ALA D . n D 1 28 THR 28 252 252 THR THR D . n D 1 29 PRO 29 253 253 PRO PRO D . n D 1 30 LYS 30 254 254 LYS LYS D . n D 1 31 GLY 31 255 255 GLY GLY D . n D 1 32 VAL 32 256 256 VAL VAL D . n D 1 33 LEU 33 257 257 LEU LEU D . n D 1 34 LYS 34 258 258 LYS LYS D . n D 1 35 ILE 35 259 259 ILE ILE D . n D 1 36 MET 36 260 260 MET MET D . n D 1 37 LYS 37 261 261 LYS LYS D . n D 1 38 VAL 38 262 262 VAL VAL D . n D 1 39 GLU 39 263 263 GLU GLU D . n D 1 40 GLY 40 264 264 GLY GLY D . n D 1 41 LEU 41 265 265 LEU LEU D . n D 1 42 THR 42 266 266 THR THR D . n D 1 43 ILE 43 267 267 ILE ILE D . n D 1 44 TYR 44 268 268 TYR TYR D . n D 1 45 HIS 45 269 269 HIS HIS D . n D 1 46 VAL 46 270 270 VAL VAL D . n D 1 47 LYS 47 271 271 LYS LYS D . n D 1 48 SER 48 272 272 SER SER D . n D 1 49 HIS 49 273 273 HIS HIS D . n D 1 50 LEU 50 274 274 LEU LEU D . n D 1 51 GLN 51 275 275 GLN GLN D . n D 1 52 LYS 52 276 276 LYS LYS D . n D 1 53 TYR 53 277 277 TYR TYR D . n D 1 54 ARG 54 278 278 ARG ARG D . n D 1 55 THR 55 279 279 THR THR D . n D 1 56 ALA 56 280 280 ALA ALA D . n D 1 57 ARG 57 281 281 ARG ARG D . n D 1 58 TYR 58 282 ? ? ? D . n E 2 1 DC 1 1 1 DC DC F . n E 2 2 DC 2 2 2 DC DC F . n E 2 3 DA 3 3 3 DA DA F . n E 2 4 DT 4 4 4 DT DT F . n E 2 5 DA 5 5 5 DA DA F . n E 2 6 DT 6 6 6 DT DT F . n E 2 7 DA 7 7 7 DA DA F . n E 2 8 DT 8 8 8 DT DT F . n E 2 9 DG 9 9 9 DG DG F . n E 2 10 DA 10 10 10 DA DA F . n E 2 11 DC 11 11 11 DC DC F . n F 3 1 DG 1 1 1 DG DG E . n F 3 2 DT 2 2 2 DT DT E . n F 3 3 DC 3 3 3 DC DC E . n F 3 4 DA 4 4 4 DA DA E . n F 3 5 DT 5 5 5 DT DT E . n F 3 6 DA 6 6 6 DA DA E . n F 3 7 DT 7 7 7 DT DT E . n F 3 8 DA 8 8 8 DA DA E . n F 3 9 DT 9 9 9 DT DT E . n F 3 10 DG 10 10 10 DG DG E . n F 3 11 DG 11 11 11 DG DG E . n G 4 1 DG 1 1 1 DG DG X . n G 4 2 DG 2 2 2 DG DG X . n G 4 3 DT 3 3 3 DT DT X . n G 4 4 DA 4 4 4 DA DA X . n G 4 5 DT 5 5 5 DT DT X . n G 4 6 DA 6 6 6 DA DA X . n G 4 7 DT 7 7 7 DT DT X . n G 4 8 DA 8 8 8 DA DA X . n G 4 9 DC 9 9 9 DC DC X . n G 4 10 DT 10 10 10 DT DT X . n G 4 11 DG 11 11 11 DG DG X . n H 5 1 DC 1 1 1 DC DC Y . n H 5 2 DA 2 2 2 DA DA Y . n H 5 3 DG 3 3 3 DG DG Y . n H 5 4 DT 4 4 4 DT DT Y . n H 5 5 DA 5 5 5 DA DA Y . n H 5 6 DT 6 6 6 DT DT Y . n H 5 7 DA 7 7 7 DA DA Y . n H 5 8 DT 8 8 8 DT DT Y . n H 5 9 DA 9 9 9 DA DA Y . n H 5 10 DC 10 10 10 DC DC Y . n H 5 11 DC 11 11 11 DC DC Y . n # _pdbx_nonpoly_scheme.asym_id I _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id HOH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 23 _pdbx_nonpoly_scheme.pdb_mon_id HOH _pdbx_nonpoly_scheme.auth_mon_id HOH _pdbx_nonpoly_scheme.pdb_strand_id F _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 281 ? CG ? A ARG 57 CG 2 1 Y 1 A ARG 281 ? CD ? A ARG 57 CD 3 1 Y 1 A ARG 281 ? NE ? A ARG 57 NE 4 1 Y 1 A ARG 281 ? CZ ? A ARG 57 CZ 5 1 Y 1 A ARG 281 ? NH1 ? A ARG 57 NH1 6 1 Y 1 A ARG 281 ? NH2 ? A ARG 57 NH2 7 1 Y 1 F DC 1 ? "O5'" ? E DC 1 "O5'" 8 1 Y 1 E DG 1 ? "O5'" ? F DG 1 "O5'" 9 1 Y 1 X DG 1 ? "O5'" ? G DG 1 "O5'" 10 1 Y 1 Y DC 1 ? "O5'" ? H DC 1 "O5'" # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6J4R _cell.details ? _cell.formula_units_Z ? _cell.length_a 88.966 _cell.length_a_esd ? _cell.length_b 88.966 _cell.length_b_esd ? _cell.length_c 143.445 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 32 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6J4R _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.53 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 64.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '28%PEG3350 , 0.1M citrate-Na pH 5.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-04 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6J4R _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.800 _reflns.d_resolution_low 75.610 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14723 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.600 _reflns.pdbx_Rmerge_I_obs 0.111 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.116 _reflns.pdbx_Rpim_I_all 0.033 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.800 2.950 ? ? ? ? ? ? 2082 99.200 ? ? ? ? 4.072 ? ? ? ? ? ? ? ? 13.200 ? ? ? ? 4.235 1.157 ? 1 1 0.619 ? 8.850 75.610 ? ? ? ? ? ? 562 99.800 ? ? ? ? 2.8 ? ? ? ? ? ? ? ? 9.700 ? ? ? ? 0.030 0.010 ? 2 1 0.999 ? # _refine.aniso_B[1][1] 6.1600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 6.1600 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -12.3200 _refine.B_iso_max 222.950 _refine.B_iso_mean 102.8500 _refine.B_iso_min 50.940 _refine.correlation_coeff_Fo_to_Fc 0.9620 _refine.correlation_coeff_Fo_to_Fc_free 0.9540 _refine.details 'U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6J4R _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 71.7200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13959 _refine.ls_number_reflns_R_free 720 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.0500 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2171 _refine.ls_R_factor_R_free 0.2491 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2154 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.5720 _refine.pdbx_overall_ESU_R_Free 0.3130 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 19.3220 _refine.overall_SU_ML 0.3240 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 71.7200 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 2708 _refine_hist.pdbx_number_residues_total 271 _refine_hist.pdbx_B_iso_mean_solvent 50.94 _refine_hist.pdbx_number_atoms_protein 1821 _refine_hist.pdbx_number_atoms_nucleic_acid 886 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.011 2851 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.629 1.467 4023 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.153 5.000 223 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 23.646 19.149 94 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.247 15.000 352 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.941 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 367 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.020 1826 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.8000 _refine_ls_shell.d_res_low 2.8720 _refine_ls_shell.number_reflns_all 1056 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_R_work 1007 _refine_ls_shell.percent_reflns_obs 98.7800 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.5320 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.4990 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6J4R _struct.title 'Structural basis for the target DNA recognition and binding by the MYB domain of phosphate starvation response regulator 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6J4R _struct_keywords.text 'MYB domain DNA, TRANSCRIPTION, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PHR1_ARATH Q94CL7 ? 1 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARY 225 2 PDB 6J4R 6J4R ? 2 ? 1 3 PDB 6J4R 6J4R ? 3 ? 1 4 PDB 6J4R 6J4R ? 4 ? 1 5 PDB 6J4R 6J4R ? 5 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6J4R A 1 ? 58 ? Q94CL7 225 ? 282 ? 225 282 2 1 6J4R B 1 ? 58 ? Q94CL7 225 ? 282 ? 225 282 3 1 6J4R C 1 ? 58 ? Q94CL7 225 ? 282 ? 225 282 4 1 6J4R D 1 ? 58 ? Q94CL7 225 ? 282 ? 225 282 5 2 6J4R F 1 ? 11 ? 6J4R 1 ? 11 ? 1 11 6 3 6J4R E 1 ? 11 ? 6J4R 1 ? 11 ? 1 11 7 4 6J4R X 1 ? 11 ? 6J4R 1 ? 11 ? 1 11 8 5 6J4R Y 1 ? 11 ? 6J4R 1 ? 11 ? 1 11 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4540 ? 1 MORE -14 ? 1 'SSA (A^2)' 10100 ? 2 'ABSA (A^2)' 4490 ? 2 MORE -11 ? 2 'SSA (A^2)' 9600 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E,F,I 2 1 B,C,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 7 ? LEU A 21 ? THR A 231 LEU A 245 1 ? 15 HELX_P HELX_P2 AA2 GLY A 22 ? ALA A 27 ? GLY A 246 ALA A 251 1 ? 6 HELX_P HELX_P3 AA3 THR A 28 ? LYS A 37 ? THR A 252 LYS A 261 1 ? 10 HELX_P HELX_P4 AA4 THR A 42 ? ALA A 56 ? THR A 266 ALA A 280 1 ? 15 HELX_P HELX_P5 AA5 THR B 7 ? LEU B 21 ? THR B 231 LEU B 245 1 ? 15 HELX_P HELX_P6 AA6 THR B 28 ? LYS B 37 ? THR B 252 LYS B 261 1 ? 10 HELX_P HELX_P7 AA7 THR B 42 ? ALA B 56 ? THR B 266 ALA B 280 1 ? 15 HELX_P HELX_P8 AA8 THR C 7 ? LEU C 21 ? THR C 231 LEU C 245 1 ? 15 HELX_P HELX_P9 AA9 THR C 28 ? LYS C 37 ? THR C 252 LYS C 261 1 ? 10 HELX_P HELX_P10 AB1 THR C 42 ? ALA C 56 ? THR C 266 ALA C 280 1 ? 15 HELX_P HELX_P11 AB2 THR D 7 ? LEU D 21 ? THR D 231 LEU D 245 1 ? 15 HELX_P HELX_P12 AB3 THR D 28 ? LYS D 37 ? THR D 252 LYS D 261 1 ? 10 HELX_P HELX_P13 AB4 THR D 42 ? ALA D 56 ? THR D 266 ALA D 280 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? E DC 1 N3 ? ? ? 1_555 F DG 11 N1 ? ? F DC 1 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? E DC 1 N4 ? ? ? 1_555 F DG 11 O6 ? ? F DC 1 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? E DC 1 O2 ? ? ? 1_555 F DG 11 N2 ? ? F DC 1 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 10 N2 ? ? F DC 2 E DG 10 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog5 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 9 N3 ? ? F DA 3 E DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? E DA 3 N6 ? ? ? 1_555 F DT 9 O4 ? ? F DA 3 E DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 8 N1 ? ? F DT 4 E DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 8 N6 ? ? F DT 4 E DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 7 N3 ? ? F DA 5 E DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 7 O4 ? ? F DA 5 E DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 6 N1 ? ? F DT 6 E DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 6 N6 ? ? F DT 6 E DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? E DA 7 N1 ? ? ? 1_555 F DT 5 N3 ? ? F DA 7 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? E DA 7 N6 ? ? ? 1_555 F DT 5 O4 ? ? F DA 7 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 4 N1 ? ? F DT 8 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 4 N6 ? ? F DT 8 E DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 3 N3 ? ? F DG 9 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 3 O2 ? ? F DG 9 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 3 N4 ? ? F DG 9 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? E DA 10 N1 ? ? ? 1_555 F DT 2 N3 ? ? F DA 10 E DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? E DA 10 N6 ? ? ? 1_555 F DT 2 O4 ? ? F DA 10 E DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 1 N1 ? ? F DC 11 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 1 O6 ? ? F DC 11 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 1 N2 ? ? F DC 11 E DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? G DG 1 N1 ? ? ? 1_555 H DC 11 N3 ? ? X DG 1 Y DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? G DG 1 N2 ? ? ? 1_555 H DC 11 O2 ? ? X DG 1 Y DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? G DG 1 O6 ? ? ? 1_555 H DC 11 N4 ? ? X DG 1 Y DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? G DG 2 N1 ? ? ? 1_555 H DC 10 N3 ? ? X DG 2 Y DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? G DG 2 N2 ? ? ? 1_555 H DC 10 O2 ? ? X DG 2 Y DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? G DG 2 O6 ? ? ? 1_555 H DC 10 N4 ? ? X DG 2 Y DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? G DT 3 N3 ? ? ? 1_555 H DA 9 N1 ? ? X DT 3 Y DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? G DT 3 O4 ? ? ? 1_555 H DA 9 N6 ? ? X DT 3 Y DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? G DA 4 N1 ? ? ? 1_555 H DT 8 N3 ? ? X DA 4 Y DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? G DA 4 N6 ? ? ? 1_555 H DT 8 O4 ? ? X DA 4 Y DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? G DT 5 N3 ? ? ? 1_555 H DA 7 N1 ? ? X DT 5 Y DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? G DT 5 O4 ? ? ? 1_555 H DA 7 N6 ? ? X DT 5 Y DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? G DA 6 N1 ? ? ? 1_555 H DT 6 N3 ? ? X DA 6 Y DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? G DA 6 N6 ? ? ? 1_555 H DT 6 O4 ? ? X DA 6 Y DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? G DT 7 N3 ? ? ? 1_555 H DA 5 N1 ? ? X DT 7 Y DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? G DT 7 O4 ? ? ? 1_555 H DA 5 N6 ? ? X DT 7 Y DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? G DA 8 N1 ? ? ? 1_555 H DT 4 N3 ? ? X DA 8 Y DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? G DA 8 N6 ? ? ? 1_555 H DT 4 O4 ? ? X DA 8 Y DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? G DC 9 N3 ? ? ? 1_555 H DG 3 N1 ? ? X DC 9 Y DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? G DC 9 N4 ? ? ? 1_555 H DG 3 O6 ? ? X DC 9 Y DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? G DC 9 O2 ? ? ? 1_555 H DG 3 N2 ? ? X DC 9 Y DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? G DT 10 N3 ? ? ? 1_555 H DA 2 N1 ? ? X DT 10 Y DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? G DT 10 O4 ? ? ? 1_555 H DA 2 N6 ? ? X DT 10 Y DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? G DG 11 N1 ? ? ? 1_555 H DC 1 N3 ? ? X DG 11 Y DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? G DG 11 N2 ? ? ? 1_555 H DC 1 O2 ? ? X DG 11 Y DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? G DG 11 O6 ? ? ? 1_555 H DC 1 N4 ? ? X DG 11 Y DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A ARG 229 ? ? NE A ARG 229 ? ? 1.222 1.460 -0.238 0.017 N 2 1 NE A ARG 229 ? ? CZ A ARG 229 ? ? 1.479 1.326 0.153 0.013 N 3 1 CZ B ARG 229 ? ? NH2 B ARG 229 ? ? 1.498 1.326 0.172 0.013 N 4 1 CZ C ARG 229 ? ? NH2 C ARG 229 ? ? 1.417 1.326 0.091 0.013 N 5 1 CZ D ARG 229 ? ? NH2 D ARG 229 ? ? 1.445 1.326 0.119 0.013 N 6 1 "O3'" F DA 10 ? ? P F DC 11 ? ? 1.524 1.607 -0.083 0.012 Y 7 1 "O3'" E DA 8 ? ? P E DT 9 ? ? 1.498 1.607 -0.109 0.012 Y 8 1 "O3'" X DT 7 ? ? P X DA 8 ? ? 1.517 1.607 -0.090 0.012 Y 9 1 "O3'" Y DT 4 ? ? P Y DA 5 ? ? 1.534 1.607 -0.073 0.012 Y 10 1 "O3'" Y DA 5 ? ? P Y DT 6 ? ? 1.531 1.607 -0.076 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 229 ? ? CZ A ARG 229 ? ? NH2 A ARG 229 ? ? 116.55 120.30 -3.75 0.50 N 2 1 CG B ARG 229 ? ? CD B ARG 229 ? ? NE B ARG 229 ? ? 99.02 111.80 -12.78 2.10 N 3 1 "O5'" F DG 9 ? ? P F DG 9 ? ? OP1 F DG 9 ? ? 100.11 105.70 -5.59 0.90 N 4 1 "O5'" X DG 2 ? ? P X DG 2 ? ? OP1 X DG 2 ? ? 100.01 105.70 -5.69 0.90 N 5 1 "O5'" X DT 5 ? ? P X DT 5 ? ? OP2 X DT 5 ? ? 120.25 110.70 9.55 1.20 N 6 1 "C1'" Y DT 4 ? ? "O4'" Y DT 4 ? ? "C4'" Y DT 4 ? ? 103.44 110.10 -6.66 1.00 N 7 1 "C1'" Y DT 6 ? ? "O4'" Y DT 6 ? ? "C4'" Y DT 6 ? ? 103.36 110.10 -6.74 1.00 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 225 ? B LYS 1 2 1 Y 1 C LYS 225 ? C LYS 1 3 1 Y 1 C ARG 281 ? C ARG 57 4 1 Y 1 C TYR 282 ? C TYR 58 5 1 Y 1 D TYR 282 ? D TYR 58 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 DA OP3 O N N 58 DA P P N N 59 DA OP1 O N N 60 DA OP2 O N N 61 DA "O5'" O N N 62 DA "C5'" C N N 63 DA "C4'" C N R 64 DA "O4'" O N N 65 DA "C3'" C N S 66 DA "O3'" O N N 67 DA "C2'" C N N 68 DA "C1'" C N R 69 DA N9 N Y N 70 DA C8 C Y N 71 DA N7 N Y N 72 DA C5 C Y N 73 DA C6 C Y N 74 DA N6 N N N 75 DA N1 N Y N 76 DA C2 C Y N 77 DA N3 N Y N 78 DA C4 C Y N 79 DA HOP3 H N N 80 DA HOP2 H N N 81 DA "H5'" H N N 82 DA "H5''" H N N 83 DA "H4'" H N N 84 DA "H3'" H N N 85 DA "HO3'" H N N 86 DA "H2'" H N N 87 DA "H2''" H N N 88 DA "H1'" H N N 89 DA H8 H N N 90 DA H61 H N N 91 DA H62 H N N 92 DA H2 H N N 93 DC OP3 O N N 94 DC P P N N 95 DC OP1 O N N 96 DC OP2 O N N 97 DC "O5'" O N N 98 DC "C5'" C N N 99 DC "C4'" C N R 100 DC "O4'" O N N 101 DC "C3'" C N S 102 DC "O3'" O N N 103 DC "C2'" C N N 104 DC "C1'" C N R 105 DC N1 N N N 106 DC C2 C N N 107 DC O2 O N N 108 DC N3 N N N 109 DC C4 C N N 110 DC N4 N N N 111 DC C5 C N N 112 DC C6 C N N 113 DC HOP3 H N N 114 DC HOP2 H N N 115 DC "H5'" H N N 116 DC "H5''" H N N 117 DC "H4'" H N N 118 DC "H3'" H N N 119 DC "HO3'" H N N 120 DC "H2'" H N N 121 DC "H2''" H N N 122 DC "H1'" H N N 123 DC H41 H N N 124 DC H42 H N N 125 DC H5 H N N 126 DC H6 H N N 127 DG OP3 O N N 128 DG P P N N 129 DG OP1 O N N 130 DG OP2 O N N 131 DG "O5'" O N N 132 DG "C5'" C N N 133 DG "C4'" C N R 134 DG "O4'" O N N 135 DG "C3'" C N S 136 DG "O3'" O N N 137 DG "C2'" C N N 138 DG "C1'" C N R 139 DG N9 N Y N 140 DG C8 C Y N 141 DG N7 N Y N 142 DG C5 C Y N 143 DG C6 C N N 144 DG O6 O N N 145 DG N1 N N N 146 DG C2 C N N 147 DG N2 N N N 148 DG N3 N N N 149 DG C4 C Y N 150 DG HOP3 H N N 151 DG HOP2 H N N 152 DG "H5'" H N N 153 DG "H5''" H N N 154 DG "H4'" H N N 155 DG "H3'" H N N 156 DG "HO3'" H N N 157 DG "H2'" H N N 158 DG "H2''" H N N 159 DG "H1'" H N N 160 DG H8 H N N 161 DG H1 H N N 162 DG H21 H N N 163 DG H22 H N N 164 DT OP3 O N N 165 DT P P N N 166 DT OP1 O N N 167 DT OP2 O N N 168 DT "O5'" O N N 169 DT "C5'" C N N 170 DT "C4'" C N R 171 DT "O4'" O N N 172 DT "C3'" C N S 173 DT "O3'" O N N 174 DT "C2'" C N N 175 DT "C1'" C N R 176 DT N1 N N N 177 DT C2 C N N 178 DT O2 O N N 179 DT N3 N N N 180 DT C4 C N N 181 DT O4 O N N 182 DT C5 C N N 183 DT C7 C N N 184 DT C6 C N N 185 DT HOP3 H N N 186 DT HOP2 H N N 187 DT "H5'" H N N 188 DT "H5''" H N N 189 DT "H4'" H N N 190 DT "H3'" H N N 191 DT "HO3'" H N N 192 DT "H2'" H N N 193 DT "H2''" H N N 194 DT "H1'" H N N 195 DT H3 H N N 196 DT H71 H N N 197 DT H72 H N N 198 DT H73 H N N 199 DT H6 H N N 200 GLN N N N N 201 GLN CA C N S 202 GLN C C N N 203 GLN O O N N 204 GLN CB C N N 205 GLN CG C N N 206 GLN CD C N N 207 GLN OE1 O N N 208 GLN NE2 N N N 209 GLN OXT O N N 210 GLN H H N N 211 GLN H2 H N N 212 GLN HA H N N 213 GLN HB2 H N N 214 GLN HB3 H N N 215 GLN HG2 H N N 216 GLN HG3 H N N 217 GLN HE21 H N N 218 GLN HE22 H N N 219 GLN HXT H N N 220 GLU N N N N 221 GLU CA C N S 222 GLU C C N N 223 GLU O O N N 224 GLU CB C N N 225 GLU CG C N N 226 GLU CD C N N 227 GLU OE1 O N N 228 GLU OE2 O N N 229 GLU OXT O N N 230 GLU H H N N 231 GLU H2 H N N 232 GLU HA H N N 233 GLU HB2 H N N 234 GLU HB3 H N N 235 GLU HG2 H N N 236 GLU HG3 H N N 237 GLU HE2 H N N 238 GLU HXT H N N 239 GLY N N N N 240 GLY CA C N N 241 GLY C C N N 242 GLY O O N N 243 GLY OXT O N N 244 GLY H H N N 245 GLY H2 H N N 246 GLY HA2 H N N 247 GLY HA3 H N N 248 GLY HXT H N N 249 HIS N N N N 250 HIS CA C N S 251 HIS C C N N 252 HIS O O N N 253 HIS CB C N N 254 HIS CG C Y N 255 HIS ND1 N Y N 256 HIS CD2 C Y N 257 HIS CE1 C Y N 258 HIS NE2 N Y N 259 HIS OXT O N N 260 HIS H H N N 261 HIS H2 H N N 262 HIS HA H N N 263 HIS HB2 H N N 264 HIS HB3 H N N 265 HIS HD1 H N N 266 HIS HD2 H N N 267 HIS HE1 H N N 268 HIS HE2 H N N 269 HIS HXT H N N 270 HOH O O N N 271 HOH H1 H N N 272 HOH H2 H N N 273 ILE N N N N 274 ILE CA C N S 275 ILE C C N N 276 ILE O O N N 277 ILE CB C N S 278 ILE CG1 C N N 279 ILE CG2 C N N 280 ILE CD1 C N N 281 ILE OXT O N N 282 ILE H H N N 283 ILE H2 H N N 284 ILE HA H N N 285 ILE HB H N N 286 ILE HG12 H N N 287 ILE HG13 H N N 288 ILE HG21 H N N 289 ILE HG22 H N N 290 ILE HG23 H N N 291 ILE HD11 H N N 292 ILE HD12 H N N 293 ILE HD13 H N N 294 ILE HXT H N N 295 LEU N N N N 296 LEU CA C N S 297 LEU C C N N 298 LEU O O N N 299 LEU CB C N N 300 LEU CG C N N 301 LEU CD1 C N N 302 LEU CD2 C N N 303 LEU OXT O N N 304 LEU H H N N 305 LEU H2 H N N 306 LEU HA H N N 307 LEU HB2 H N N 308 LEU HB3 H N N 309 LEU HG H N N 310 LEU HD11 H N N 311 LEU HD12 H N N 312 LEU HD13 H N N 313 LEU HD21 H N N 314 LEU HD22 H N N 315 LEU HD23 H N N 316 LEU HXT H N N 317 LYS N N N N 318 LYS CA C N S 319 LYS C C N N 320 LYS O O N N 321 LYS CB C N N 322 LYS CG C N N 323 LYS CD C N N 324 LYS CE C N N 325 LYS NZ N N N 326 LYS OXT O N N 327 LYS H H N N 328 LYS H2 H N N 329 LYS HA H N N 330 LYS HB2 H N N 331 LYS HB3 H N N 332 LYS HG2 H N N 333 LYS HG3 H N N 334 LYS HD2 H N N 335 LYS HD3 H N N 336 LYS HE2 H N N 337 LYS HE3 H N N 338 LYS HZ1 H N N 339 LYS HZ2 H N N 340 LYS HZ3 H N N 341 LYS HXT H N N 342 MET N N N N 343 MET CA C N S 344 MET C C N N 345 MET O O N N 346 MET CB C N N 347 MET CG C N N 348 MET SD S N N 349 MET CE C N N 350 MET OXT O N N 351 MET H H N N 352 MET H2 H N N 353 MET HA H N N 354 MET HB2 H N N 355 MET HB3 H N N 356 MET HG2 H N N 357 MET HG3 H N N 358 MET HE1 H N N 359 MET HE2 H N N 360 MET HE3 H N N 361 MET HXT H N N 362 PHE N N N N 363 PHE CA C N S 364 PHE C C N N 365 PHE O O N N 366 PHE CB C N N 367 PHE CG C Y N 368 PHE CD1 C Y N 369 PHE CD2 C Y N 370 PHE CE1 C Y N 371 PHE CE2 C Y N 372 PHE CZ C Y N 373 PHE OXT O N N 374 PHE H H N N 375 PHE H2 H N N 376 PHE HA H N N 377 PHE HB2 H N N 378 PHE HB3 H N N 379 PHE HD1 H N N 380 PHE HD2 H N N 381 PHE HE1 H N N 382 PHE HE2 H N N 383 PHE HZ H N N 384 PHE HXT H N N 385 PRO N N N N 386 PRO CA C N S 387 PRO C C N N 388 PRO O O N N 389 PRO CB C N N 390 PRO CG C N N 391 PRO CD C N N 392 PRO OXT O N N 393 PRO H H N N 394 PRO HA H N N 395 PRO HB2 H N N 396 PRO HB3 H N N 397 PRO HG2 H N N 398 PRO HG3 H N N 399 PRO HD2 H N N 400 PRO HD3 H N N 401 PRO HXT H N N 402 SER N N N N 403 SER CA C N S 404 SER C C N N 405 SER O O N N 406 SER CB C N N 407 SER OG O N N 408 SER OXT O N N 409 SER H H N N 410 SER H2 H N N 411 SER HA H N N 412 SER HB2 H N N 413 SER HB3 H N N 414 SER HG H N N 415 SER HXT H N N 416 THR N N N N 417 THR CA C N S 418 THR C C N N 419 THR O O N N 420 THR CB C N R 421 THR OG1 O N N 422 THR CG2 C N N 423 THR OXT O N N 424 THR H H N N 425 THR H2 H N N 426 THR HA H N N 427 THR HB H N N 428 THR HG1 H N N 429 THR HG21 H N N 430 THR HG22 H N N 431 THR HG23 H N N 432 THR HXT H N N 433 TRP N N N N 434 TRP CA C N S 435 TRP C C N N 436 TRP O O N N 437 TRP CB C N N 438 TRP CG C Y N 439 TRP CD1 C Y N 440 TRP CD2 C Y N 441 TRP NE1 N Y N 442 TRP CE2 C Y N 443 TRP CE3 C Y N 444 TRP CZ2 C Y N 445 TRP CZ3 C Y N 446 TRP CH2 C Y N 447 TRP OXT O N N 448 TRP H H N N 449 TRP H2 H N N 450 TRP HA H N N 451 TRP HB2 H N N 452 TRP HB3 H N N 453 TRP HD1 H N N 454 TRP HE1 H N N 455 TRP HE3 H N N 456 TRP HZ2 H N N 457 TRP HZ3 H N N 458 TRP HH2 H N N 459 TRP HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 VAL N N N N 485 VAL CA C N S 486 VAL C C N N 487 VAL O O N N 488 VAL CB C N N 489 VAL CG1 C N N 490 VAL CG2 C N N 491 VAL OXT O N N 492 VAL H H N N 493 VAL H2 H N N 494 VAL HA H N N 495 VAL HB H N N 496 VAL HG11 H N N 497 VAL HG12 H N N 498 VAL HG13 H N N 499 VAL HG21 H N N 500 VAL HG22 H N N 501 VAL HG23 H N N 502 VAL HXT H N N 503 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 DA OP3 P sing N N 55 DA OP3 HOP3 sing N N 56 DA P OP1 doub N N 57 DA P OP2 sing N N 58 DA P "O5'" sing N N 59 DA OP2 HOP2 sing N N 60 DA "O5'" "C5'" sing N N 61 DA "C5'" "C4'" sing N N 62 DA "C5'" "H5'" sing N N 63 DA "C5'" "H5''" sing N N 64 DA "C4'" "O4'" sing N N 65 DA "C4'" "C3'" sing N N 66 DA "C4'" "H4'" sing N N 67 DA "O4'" "C1'" sing N N 68 DA "C3'" "O3'" sing N N 69 DA "C3'" "C2'" sing N N 70 DA "C3'" "H3'" sing N N 71 DA "O3'" "HO3'" sing N N 72 DA "C2'" "C1'" sing N N 73 DA "C2'" "H2'" sing N N 74 DA "C2'" "H2''" sing N N 75 DA "C1'" N9 sing N N 76 DA "C1'" "H1'" sing N N 77 DA N9 C8 sing Y N 78 DA N9 C4 sing Y N 79 DA C8 N7 doub Y N 80 DA C8 H8 sing N N 81 DA N7 C5 sing Y N 82 DA C5 C6 sing Y N 83 DA C5 C4 doub Y N 84 DA C6 N6 sing N N 85 DA C6 N1 doub Y N 86 DA N6 H61 sing N N 87 DA N6 H62 sing N N 88 DA N1 C2 sing Y N 89 DA C2 N3 doub Y N 90 DA C2 H2 sing N N 91 DA N3 C4 sing Y N 92 DC OP3 P sing N N 93 DC OP3 HOP3 sing N N 94 DC P OP1 doub N N 95 DC P OP2 sing N N 96 DC P "O5'" sing N N 97 DC OP2 HOP2 sing N N 98 DC "O5'" "C5'" sing N N 99 DC "C5'" "C4'" sing N N 100 DC "C5'" "H5'" sing N N 101 DC "C5'" "H5''" sing N N 102 DC "C4'" "O4'" sing N N 103 DC "C4'" "C3'" sing N N 104 DC "C4'" "H4'" sing N N 105 DC "O4'" "C1'" sing N N 106 DC "C3'" "O3'" sing N N 107 DC "C3'" "C2'" sing N N 108 DC "C3'" "H3'" sing N N 109 DC "O3'" "HO3'" sing N N 110 DC "C2'" "C1'" sing N N 111 DC "C2'" "H2'" sing N N 112 DC "C2'" "H2''" sing N N 113 DC "C1'" N1 sing N N 114 DC "C1'" "H1'" sing N N 115 DC N1 C2 sing N N 116 DC N1 C6 sing N N 117 DC C2 O2 doub N N 118 DC C2 N3 sing N N 119 DC N3 C4 doub N N 120 DC C4 N4 sing N N 121 DC C4 C5 sing N N 122 DC N4 H41 sing N N 123 DC N4 H42 sing N N 124 DC C5 C6 doub N N 125 DC C5 H5 sing N N 126 DC C6 H6 sing N N 127 DG OP3 P sing N N 128 DG OP3 HOP3 sing N N 129 DG P OP1 doub N N 130 DG P OP2 sing N N 131 DG P "O5'" sing N N 132 DG OP2 HOP2 sing N N 133 DG "O5'" "C5'" sing N N 134 DG "C5'" "C4'" sing N N 135 DG "C5'" "H5'" sing N N 136 DG "C5'" "H5''" sing N N 137 DG "C4'" "O4'" sing N N 138 DG "C4'" "C3'" sing N N 139 DG "C4'" "H4'" sing N N 140 DG "O4'" "C1'" sing N N 141 DG "C3'" "O3'" sing N N 142 DG "C3'" "C2'" sing N N 143 DG "C3'" "H3'" sing N N 144 DG "O3'" "HO3'" sing N N 145 DG "C2'" "C1'" sing N N 146 DG "C2'" "H2'" sing N N 147 DG "C2'" "H2''" sing N N 148 DG "C1'" N9 sing N N 149 DG "C1'" "H1'" sing N N 150 DG N9 C8 sing Y N 151 DG N9 C4 sing Y N 152 DG C8 N7 doub Y N 153 DG C8 H8 sing N N 154 DG N7 C5 sing Y N 155 DG C5 C6 sing N N 156 DG C5 C4 doub Y N 157 DG C6 O6 doub N N 158 DG C6 N1 sing N N 159 DG N1 C2 sing N N 160 DG N1 H1 sing N N 161 DG C2 N2 sing N N 162 DG C2 N3 doub N N 163 DG N2 H21 sing N N 164 DG N2 H22 sing N N 165 DG N3 C4 sing N N 166 DT OP3 P sing N N 167 DT OP3 HOP3 sing N N 168 DT P OP1 doub N N 169 DT P OP2 sing N N 170 DT P "O5'" sing N N 171 DT OP2 HOP2 sing N N 172 DT "O5'" "C5'" sing N N 173 DT "C5'" "C4'" sing N N 174 DT "C5'" "H5'" sing N N 175 DT "C5'" "H5''" sing N N 176 DT "C4'" "O4'" sing N N 177 DT "C4'" "C3'" sing N N 178 DT "C4'" "H4'" sing N N 179 DT "O4'" "C1'" sing N N 180 DT "C3'" "O3'" sing N N 181 DT "C3'" "C2'" sing N N 182 DT "C3'" "H3'" sing N N 183 DT "O3'" "HO3'" sing N N 184 DT "C2'" "C1'" sing N N 185 DT "C2'" "H2'" sing N N 186 DT "C2'" "H2''" sing N N 187 DT "C1'" N1 sing N N 188 DT "C1'" "H1'" sing N N 189 DT N1 C2 sing N N 190 DT N1 C6 sing N N 191 DT C2 O2 doub N N 192 DT C2 N3 sing N N 193 DT N3 C4 sing N N 194 DT N3 H3 sing N N 195 DT C4 O4 doub N N 196 DT C4 C5 sing N N 197 DT C5 C7 sing N N 198 DT C5 C6 doub N N 199 DT C7 H71 sing N N 200 DT C7 H72 sing N N 201 DT C7 H73 sing N N 202 DT C6 H6 sing N N 203 GLN N CA sing N N 204 GLN N H sing N N 205 GLN N H2 sing N N 206 GLN CA C sing N N 207 GLN CA CB sing N N 208 GLN CA HA sing N N 209 GLN C O doub N N 210 GLN C OXT sing N N 211 GLN CB CG sing N N 212 GLN CB HB2 sing N N 213 GLN CB HB3 sing N N 214 GLN CG CD sing N N 215 GLN CG HG2 sing N N 216 GLN CG HG3 sing N N 217 GLN CD OE1 doub N N 218 GLN CD NE2 sing N N 219 GLN NE2 HE21 sing N N 220 GLN NE2 HE22 sing N N 221 GLN OXT HXT sing N N 222 GLU N CA sing N N 223 GLU N H sing N N 224 GLU N H2 sing N N 225 GLU CA C sing N N 226 GLU CA CB sing N N 227 GLU CA HA sing N N 228 GLU C O doub N N 229 GLU C OXT sing N N 230 GLU CB CG sing N N 231 GLU CB HB2 sing N N 232 GLU CB HB3 sing N N 233 GLU CG CD sing N N 234 GLU CG HG2 sing N N 235 GLU CG HG3 sing N N 236 GLU CD OE1 doub N N 237 GLU CD OE2 sing N N 238 GLU OE2 HE2 sing N N 239 GLU OXT HXT sing N N 240 GLY N CA sing N N 241 GLY N H sing N N 242 GLY N H2 sing N N 243 GLY CA C sing N N 244 GLY CA HA2 sing N N 245 GLY CA HA3 sing N N 246 GLY C O doub N N 247 GLY C OXT sing N N 248 GLY OXT HXT sing N N 249 HIS N CA sing N N 250 HIS N H sing N N 251 HIS N H2 sing N N 252 HIS CA C sing N N 253 HIS CA CB sing N N 254 HIS CA HA sing N N 255 HIS C O doub N N 256 HIS C OXT sing N N 257 HIS CB CG sing N N 258 HIS CB HB2 sing N N 259 HIS CB HB3 sing N N 260 HIS CG ND1 sing Y N 261 HIS CG CD2 doub Y N 262 HIS ND1 CE1 doub Y N 263 HIS ND1 HD1 sing N N 264 HIS CD2 NE2 sing Y N 265 HIS CD2 HD2 sing N N 266 HIS CE1 NE2 sing Y N 267 HIS CE1 HE1 sing N N 268 HIS NE2 HE2 sing N N 269 HIS OXT HXT sing N N 270 HOH O H1 sing N N 271 HOH O H2 sing N N 272 ILE N CA sing N N 273 ILE N H sing N N 274 ILE N H2 sing N N 275 ILE CA C sing N N 276 ILE CA CB sing N N 277 ILE CA HA sing N N 278 ILE C O doub N N 279 ILE C OXT sing N N 280 ILE CB CG1 sing N N 281 ILE CB CG2 sing N N 282 ILE CB HB sing N N 283 ILE CG1 CD1 sing N N 284 ILE CG1 HG12 sing N N 285 ILE CG1 HG13 sing N N 286 ILE CG2 HG21 sing N N 287 ILE CG2 HG22 sing N N 288 ILE CG2 HG23 sing N N 289 ILE CD1 HD11 sing N N 290 ILE CD1 HD12 sing N N 291 ILE CD1 HD13 sing N N 292 ILE OXT HXT sing N N 293 LEU N CA sing N N 294 LEU N H sing N N 295 LEU N H2 sing N N 296 LEU CA C sing N N 297 LEU CA CB sing N N 298 LEU CA HA sing N N 299 LEU C O doub N N 300 LEU C OXT sing N N 301 LEU CB CG sing N N 302 LEU CB HB2 sing N N 303 LEU CB HB3 sing N N 304 LEU CG CD1 sing N N 305 LEU CG CD2 sing N N 306 LEU CG HG sing N N 307 LEU CD1 HD11 sing N N 308 LEU CD1 HD12 sing N N 309 LEU CD1 HD13 sing N N 310 LEU CD2 HD21 sing N N 311 LEU CD2 HD22 sing N N 312 LEU CD2 HD23 sing N N 313 LEU OXT HXT sing N N 314 LYS N CA sing N N 315 LYS N H sing N N 316 LYS N H2 sing N N 317 LYS CA C sing N N 318 LYS CA CB sing N N 319 LYS CA HA sing N N 320 LYS C O doub N N 321 LYS C OXT sing N N 322 LYS CB CG sing N N 323 LYS CB HB2 sing N N 324 LYS CB HB3 sing N N 325 LYS CG CD sing N N 326 LYS CG HG2 sing N N 327 LYS CG HG3 sing N N 328 LYS CD CE sing N N 329 LYS CD HD2 sing N N 330 LYS CD HD3 sing N N 331 LYS CE NZ sing N N 332 LYS CE HE2 sing N N 333 LYS CE HE3 sing N N 334 LYS NZ HZ1 sing N N 335 LYS NZ HZ2 sing N N 336 LYS NZ HZ3 sing N N 337 LYS OXT HXT sing N N 338 MET N CA sing N N 339 MET N H sing N N 340 MET N H2 sing N N 341 MET CA C sing N N 342 MET CA CB sing N N 343 MET CA HA sing N N 344 MET C O doub N N 345 MET C OXT sing N N 346 MET CB CG sing N N 347 MET CB HB2 sing N N 348 MET CB HB3 sing N N 349 MET CG SD sing N N 350 MET CG HG2 sing N N 351 MET CG HG3 sing N N 352 MET SD CE sing N N 353 MET CE HE1 sing N N 354 MET CE HE2 sing N N 355 MET CE HE3 sing N N 356 MET OXT HXT sing N N 357 PHE N CA sing N N 358 PHE N H sing N N 359 PHE N H2 sing N N 360 PHE CA C sing N N 361 PHE CA CB sing N N 362 PHE CA HA sing N N 363 PHE C O doub N N 364 PHE C OXT sing N N 365 PHE CB CG sing N N 366 PHE CB HB2 sing N N 367 PHE CB HB3 sing N N 368 PHE CG CD1 doub Y N 369 PHE CG CD2 sing Y N 370 PHE CD1 CE1 sing Y N 371 PHE CD1 HD1 sing N N 372 PHE CD2 CE2 doub Y N 373 PHE CD2 HD2 sing N N 374 PHE CE1 CZ doub Y N 375 PHE CE1 HE1 sing N N 376 PHE CE2 CZ sing Y N 377 PHE CE2 HE2 sing N N 378 PHE CZ HZ sing N N 379 PHE OXT HXT sing N N 380 PRO N CA sing N N 381 PRO N CD sing N N 382 PRO N H sing N N 383 PRO CA C sing N N 384 PRO CA CB sing N N 385 PRO CA HA sing N N 386 PRO C O doub N N 387 PRO C OXT sing N N 388 PRO CB CG sing N N 389 PRO CB HB2 sing N N 390 PRO CB HB3 sing N N 391 PRO CG CD sing N N 392 PRO CG HG2 sing N N 393 PRO CG HG3 sing N N 394 PRO CD HD2 sing N N 395 PRO CD HD3 sing N N 396 PRO OXT HXT sing N N 397 SER N CA sing N N 398 SER N H sing N N 399 SER N H2 sing N N 400 SER CA C sing N N 401 SER CA CB sing N N 402 SER CA HA sing N N 403 SER C O doub N N 404 SER C OXT sing N N 405 SER CB OG sing N N 406 SER CB HB2 sing N N 407 SER CB HB3 sing N N 408 SER OG HG sing N N 409 SER OXT HXT sing N N 410 THR N CA sing N N 411 THR N H sing N N 412 THR N H2 sing N N 413 THR CA C sing N N 414 THR CA CB sing N N 415 THR CA HA sing N N 416 THR C O doub N N 417 THR C OXT sing N N 418 THR CB OG1 sing N N 419 THR CB CG2 sing N N 420 THR CB HB sing N N 421 THR OG1 HG1 sing N N 422 THR CG2 HG21 sing N N 423 THR CG2 HG22 sing N N 424 THR CG2 HG23 sing N N 425 THR OXT HXT sing N N 426 TRP N CA sing N N 427 TRP N H sing N N 428 TRP N H2 sing N N 429 TRP CA C sing N N 430 TRP CA CB sing N N 431 TRP CA HA sing N N 432 TRP C O doub N N 433 TRP C OXT sing N N 434 TRP CB CG sing N N 435 TRP CB HB2 sing N N 436 TRP CB HB3 sing N N 437 TRP CG CD1 doub Y N 438 TRP CG CD2 sing Y N 439 TRP CD1 NE1 sing Y N 440 TRP CD1 HD1 sing N N 441 TRP CD2 CE2 doub Y N 442 TRP CD2 CE3 sing Y N 443 TRP NE1 CE2 sing Y N 444 TRP NE1 HE1 sing N N 445 TRP CE2 CZ2 sing Y N 446 TRP CE3 CZ3 doub Y N 447 TRP CE3 HE3 sing N N 448 TRP CZ2 CH2 doub Y N 449 TRP CZ2 HZ2 sing N N 450 TRP CZ3 CH2 sing Y N 451 TRP CZ3 HZ3 sing N N 452 TRP CH2 HH2 sing N N 453 TRP OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6J4R 'double helix' 6J4R 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 E DC 1 1_555 F DG 11 1_555 -0.302 -0.201 -0.040 4.141 -4.074 -1.789 1 F_DC1:DG11_E F 1 ? E 11 ? 19 1 1 E DC 2 1_555 F DG 10 1_555 -1.224 0.462 0.189 7.206 -6.622 14.701 2 F_DC2:DG10_E F 2 ? E 10 ? ? 1 1 E DA 3 1_555 F DT 9 1_555 -0.780 -0.456 0.401 8.734 -9.065 -6.778 3 F_DA3:DT9_E F 3 ? E 9 ? 20 1 1 E DT 4 1_555 F DA 8 1_555 -0.262 -0.310 0.302 0.501 -6.000 -0.682 4 F_DT4:DA8_E F 4 ? E 8 ? 20 1 1 E DA 5 1_555 F DT 7 1_555 -0.182 -0.120 0.152 -3.854 -6.930 -0.143 5 F_DA5:DT7_E F 5 ? E 7 ? 20 1 1 E DT 6 1_555 F DA 6 1_555 -0.037 -0.252 0.234 0.696 -12.915 3.597 6 F_DT6:DA6_E F 6 ? E 6 ? 20 1 1 E DA 7 1_555 F DT 5 1_555 0.318 -0.163 0.020 -3.028 -9.140 7.250 7 F_DA7:DT5_E F 7 ? E 5 ? 20 1 1 E DT 8 1_555 F DA 4 1_555 -0.510 -0.088 -0.035 4.289 -9.124 4.635 8 F_DT8:DA4_E F 8 ? E 4 ? 20 1 1 E DG 9 1_555 F DC 3 1_555 -0.229 0.133 -0.239 -0.099 -12.728 5.511 9 F_DG9:DC3_E F 9 ? E 3 ? 19 1 1 E DA 10 1_555 F DT 2 1_555 0.660 -0.520 -0.358 -6.950 -10.015 -2.630 10 F_DA10:DT2_E F 10 ? E 2 ? 20 1 1 E DC 11 1_555 F DG 1 1_555 0.620 -0.119 0.480 -14.390 -8.206 -2.177 11 F_DC11:DG1_E F 11 ? E 1 ? 19 1 1 G DG 1 1_555 H DC 11 1_555 -0.564 -0.276 0.183 -3.767 -10.899 -5.015 12 X_DG1:DC11_Y X 1 ? Y 11 ? 19 1 1 G DG 2 1_555 H DC 10 1_555 -0.366 0.037 -0.429 -1.569 -6.950 -0.063 13 X_DG2:DC10_Y X 2 ? Y 10 ? 19 1 1 G DT 3 1_555 H DA 9 1_555 0.504 -0.138 -0.280 5.627 -8.598 -6.267 14 X_DT3:DA9_Y X 3 ? Y 9 ? 20 1 1 G DA 4 1_555 H DT 8 1_555 -0.647 -0.294 0.202 1.782 -12.820 -3.277 15 X_DA4:DT8_Y X 4 ? Y 8 ? 20 1 1 G DT 5 1_555 H DA 7 1_555 0.136 -0.020 -0.007 3.722 -14.421 8.358 16 X_DT5:DA7_Y X 5 ? Y 7 ? 20 1 1 G DA 6 1_555 H DT 6 1_555 0.470 -0.216 0.304 -1.151 -13.839 1.068 17 X_DA6:DT6_Y X 6 ? Y 6 ? 20 1 1 G DT 7 1_555 H DA 5 1_555 -0.038 -0.117 0.487 1.571 -10.615 5.471 18 X_DT7:DA5_Y X 7 ? Y 5 ? 20 1 1 G DA 8 1_555 H DT 4 1_555 0.156 -0.135 0.355 6.136 -6.333 -5.043 19 X_DA8:DT4_Y X 8 ? Y 4 ? 20 1 1 G DC 9 1_555 H DG 3 1_555 0.575 -0.373 0.321 -3.424 -11.018 0.050 20 X_DC9:DG3_Y X 9 ? Y 3 ? 19 1 1 G DT 10 1_555 H DA 2 1_555 -0.326 -0.152 0.298 -5.412 -10.107 1.254 21 X_DT10:DA2_Y X 10 ? Y 2 ? 20 1 1 G DG 11 1_555 H DC 1 1_555 0.272 -0.296 0.092 -3.275 -7.801 -0.950 22 X_DG11:DC1_Y X 11 ? Y 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 E DC 1 1_555 F DG 11 1_555 E DC 2 1_555 F DG 10 1_555 0.372 -0.512 3.361 0.732 1.356 32.410 -1.160 -0.534 3.345 2.428 -1.311 32.446 1 FF_DC1DC2:DG10DG11_EE F 1 ? E 11 ? F 2 ? E 10 ? 1 E DC 2 1_555 F DG 10 1_555 E DA 3 1_555 F DT 9 1_555 -0.353 -0.472 3.201 -4.342 3.803 36.621 -1.241 -0.014 3.157 6.007 6.857 37.058 2 FF_DC2DA3:DT9DG10_EE F 2 ? E 10 ? F 3 ? E 9 ? 1 E DA 3 1_555 F DT 9 1_555 E DT 4 1_555 F DA 8 1_555 0.640 -1.081 3.592 3.560 -2.996 35.879 -1.268 -0.470 3.711 -4.839 -5.748 36.170 3 FF_DA3DT4:DA8DT9_EE F 3 ? E 9 ? F 4 ? E 8 ? 1 E DT 4 1_555 F DA 8 1_555 E DA 5 1_555 F DT 7 1_555 -0.162 -0.511 3.274 2.041 1.929 41.479 -0.924 0.444 3.237 2.720 -2.878 41.570 4 FF_DT4DA5:DT7DA8_EE F 4 ? E 8 ? F 5 ? E 7 ? 1 E DA 5 1_555 F DT 7 1_555 E DT 6 1_555 F DA 6 1_555 0.254 -0.534 3.180 -0.479 -3.348 32.723 -0.383 -0.528 3.213 -5.922 0.847 32.892 5 FF_DA5DT6:DA6DT7_EE F 5 ? E 7 ? F 6 ? E 6 ? 1 E DT 6 1_555 F DA 6 1_555 E DA 7 1_555 F DT 5 1_555 -0.073 -0.253 3.483 0.036 -4.838 40.852 0.200 0.108 3.490 -6.901 -0.051 41.125 6 FF_DT6DA7:DT5DA6_EE F 6 ? E 6 ? F 7 ? E 5 ? 1 E DA 7 1_555 F DT 5 1_555 E DT 8 1_555 F DA 4 1_555 -0.388 -0.594 3.043 -0.735 -3.552 27.571 -0.432 0.641 3.102 -7.413 1.533 27.804 7 FF_DA7DT8:DA4DT5_EE F 7 ? E 5 ? F 8 ? E 4 ? 1 E DT 8 1_555 F DA 4 1_555 E DG 9 1_555 F DC 3 1_555 0.330 -0.117 3.513 0.047 -2.826 41.871 0.152 -0.456 3.514 -3.948 -0.066 41.962 8 FF_DT8DG9:DC3DA4_EE F 8 ? E 4 ? F 9 ? E 3 ? 1 E DG 9 1_555 F DC 3 1_555 E DA 10 1_555 F DT 2 1_555 -0.817 -0.431 3.579 -2.171 -0.259 35.547 -0.664 0.988 3.624 -0.424 3.551 35.612 9 FF_DG9DA10:DT2DC3_EE F 9 ? E 3 ? F 10 ? E 2 ? 1 E DA 10 1_555 F DT 2 1_555 E DC 11 1_555 F DG 1 1_555 -0.102 -1.074 3.523 -5.545 5.136 37.568 -2.319 -0.581 3.334 7.877 8.505 38.294 10 FF_DA10DC11:DG1DT2_EE F 10 ? E 2 ? F 11 ? E 1 ? 1 G DG 1 1_555 H DC 11 1_555 G DG 2 1_555 H DC 10 1_555 0.147 -0.981 3.243 4.169 10.414 37.454 -2.669 0.261 2.879 15.790 -6.322 39.040 11 XX_DG1DG2:DC10DC11_YY X 1 ? Y 11 ? X 2 ? Y 10 ? 1 G DG 2 1_555 H DC 10 1_555 G DT 3 1_555 H DA 9 1_555 -0.030 -0.948 3.274 0.687 -4.198 37.897 -0.912 0.134 3.355 -6.439 -1.053 38.126 12 XX_DG2DT3:DA9DC10_YY X 2 ? Y 10 ? X 3 ? Y 9 ? 1 G DT 3 1_555 H DA 9 1_555 G DA 4 1_555 H DT 8 1_555 0.214 -0.552 3.407 -1.239 -5.531 31.102 0.069 -0.636 3.440 -10.210 2.287 31.602 13 XX_DT3DA4:DT8DA9_YY X 3 ? Y 9 ? X 4 ? Y 8 ? 1 G DA 4 1_555 H DT 8 1_555 G DT 5 1_555 H DA 7 1_555 0.538 -0.348 3.281 3.469 -2.492 37.683 -0.212 -0.378 3.331 -3.843 -5.350 37.916 14 XX_DA4DT5:DA7DT8_YY X 4 ? Y 8 ? X 5 ? Y 7 ? 1 G DT 5 1_555 H DA 7 1_555 G DA 6 1_555 H DT 6 1_555 -0.068 -0.381 3.496 -2.645 -4.507 39.048 0.009 -0.237 3.514 -6.706 3.935 39.383 15 XX_DT5DA6:DT6DA7_YY X 5 ? Y 7 ? X 6 ? Y 6 ? 1 G DA 6 1_555 H DT 6 1_555 G DT 7 1_555 H DA 5 1_555 0.071 -0.678 3.182 -0.544 -3.218 31.513 -0.658 -0.228 3.232 -5.905 0.998 31.677 16 XX_DA6DT7:DA5DT6_YY X 6 ? Y 6 ? X 7 ? Y 5 ? 1 G DT 7 1_555 H DA 5 1_555 G DA 8 1_555 H DT 4 1_555 -0.339 -0.565 3.033 -2.959 -0.873 39.773 -0.734 0.179 3.061 -1.281 4.342 39.887 17 XX_DT7DA8:DT4DA5_YY X 7 ? Y 5 ? X 8 ? Y 4 ? 1 G DA 8 1_555 H DT 4 1_555 G DC 9 1_555 H DG 3 1_555 -0.226 -1.252 3.544 -3.197 -1.934 36.270 -1.707 -0.124 3.610 -3.097 5.119 36.455 18 XX_DA8DC9:DG3DT4_YY X 8 ? Y 4 ? X 9 ? Y 3 ? 1 G DC 9 1_555 H DG 3 1_555 G DT 10 1_555 H DA 2 1_555 -0.413 -0.953 3.310 -0.145 4.734 29.102 -2.872 0.780 3.121 9.342 0.287 29.476 19 XX_DC9DT10:DA2DG3_YY X 9 ? Y 3 ? X 10 ? Y 2 ? 1 G DT 10 1_555 H DA 2 1_555 G DG 11 1_555 H DC 1 1_555 0.113 -0.390 3.311 -0.129 0.547 37.650 -0.676 -0.192 3.304 0.848 0.200 37.654 20 XX_DT10DG11:DC1DA2_YY X 10 ? Y 2 ? X 11 ? Y 1 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 31470741 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6J4R _atom_sites.fract_transf_matrix[1][1] 0.011240 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011240 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006971 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_