HEADER HYDROLASE 12-JAN-19 6J5X TITLE CRYSTAL STRUCTURE OF FUMARYLPYRUVATE HYDROLASE FROM CORYNEBACTERIUM TITLE 2 GLUTAMICUM IN COMPLEX WITH MN2+ AND PYRUVATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED 2-KETO-4-PENTENOATE HYDRATASE/2-OXOHEPTA-3-ENE-1, COMPND 3 7-DIOIC ACID HYDRATASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: BETA-KETO HYDROLASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_COMMON: BREVIBACTERIUM SACCHAROLYTICUM; SOURCE 4 ORGANISM_TAXID: 1718; SOURCE 5 GENE: CG3350; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.HONG,H.SEO,K.-J.KIM,W.PARK REVDAT 4 22-NOV-23 6J5X 1 REMARK REVDAT 3 15-NOV-23 6J5X 1 LINK ATOM REVDAT 2 15-JAN-20 6J5X 1 JRNL REVDAT 1 18-DEC-19 6J5X 0 JRNL AUTH H.HONG,H.SEO,W.PARK,K.J.KIM JRNL TITL SEQUENCE, STRUCTURE AND FUNCTION-BASED CLASSIFICATION OF THE JRNL TITL 2 BROADLY CONSERVED FAH SUPERFAMILY REVEALS TWO DISTINCT JRNL TITL 3 FUMARYLPYRUVATE HYDROLASE SUBFAMILIES. JRNL REF ENVIRON.MICROBIOL. V. 22 270 2020 JRNL REFN ESSN 1462-2920 JRNL PMID 31657110 JRNL DOI 10.1111/1462-2920.14844 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 51553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2479 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3256 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4328 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.96000 REMARK 3 B22 (A**2) : 1.06000 REMARK 3 B33 (A**2) : 0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.134 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.101 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.369 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4473 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4072 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6093 ; 1.582 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9455 ; 1.353 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 560 ; 8.052 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 229 ;32.731 ;23.275 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 709 ;13.384 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;16.353 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 589 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5046 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 911 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6J5X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51565 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.785 REMARK 200 RESOLUTION RANGE LOW (A) : 60.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6J57 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, HEPES, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.31050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.13000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.64800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.13000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.31050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.64800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 GLU B 281 REMARK 465 HIS B 282 REMARK 465 HIS B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 9 -115.81 59.89 REMARK 500 ALA A 49 26.10 -141.82 REMARK 500 ALA A 118 51.12 -146.58 REMARK 500 SER A 175 27.58 -143.65 REMARK 500 ALA A 267 121.35 -39.99 REMARK 500 ASN B 40 34.96 -96.42 REMARK 500 LEU B 75 64.07 61.51 REMARK 500 ALA B 118 53.58 -142.38 REMARK 500 SER B 175 26.84 -144.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 305 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 122 OE1 REMARK 620 2 GLU A 124 OE2 99.0 REMARK 620 3 ASP A 153 OD2 88.9 112.2 REMARK 620 4 HOH A 415 O 176.8 82.4 93.2 REMARK 620 5 HOH A 482 O 90.6 134.2 112.7 86.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 122 OE1 REMARK 620 2 GLU B 124 OE2 94.6 REMARK 620 3 ASP B 153 OD2 85.7 103.5 REMARK 620 4 PYR B 305 O 92.1 94.8 161.7 REMARK 620 5 PYR B 305 O3 83.1 165.3 90.9 70.8 REMARK 620 6 HOH B 428 O 175.5 89.8 92.8 88.0 92.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PYR B 305 DBREF1 6J5X A 1 279 UNP A0A1R4GQY2_CORGT DBREF2 6J5X A A0A1R4GQY2 1 279 DBREF1 6J5X B 1 279 UNP A0A1R4GQY2_CORGT DBREF2 6J5X B A0A1R4GQY2 1 279 SEQADV 6J5X LEU A 280 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X GLU A 281 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 282 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 283 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 284 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 285 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 286 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS A 287 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X LEU B 280 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X GLU B 281 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 282 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 283 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 284 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 285 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 286 UNP A0A1R4GQY EXPRESSION TAG SEQADV 6J5X HIS B 287 UNP A0A1R4GQY EXPRESSION TAG SEQRES 1 A 287 MET ARG LEU ALA THR ILE ARG THR ASN GLY THR THR ILE SEQRES 2 A 287 ALA ALA ARG VAL GLU SER GLU ASN THR ALA THR THR ILE SEQRES 3 A 287 GLU GLY PHE ALA ASN VAL GLY GLU LEU LEU GLN GLU SER SEQRES 4 A 287 ASN TRP ARG GLU LEU ALA GLU ASN ALA ALA GLY GLU ALA SEQRES 5 A 287 VAL THR PHE GLU ASN LYS GLU LEU ASP ALA VAL VAL PRO SEQRES 6 A 287 ALA PRO LYS LYS ILE VAL CYS VAL GLY LEU ASN TYR ALA SEQRES 7 A 287 ASN HIS ILE LYS GLU MET GLY ARG ASP LEU PRO ASP THR SEQRES 8 A 287 PRO THR LEU PHE VAL LYS PHE PRO ASP ALA LEU ILE GLY SEQRES 9 A 287 PRO PHE ASP ASP VAL VAL VAL PRO GLU TRP ALA ASN LYS SEQRES 10 A 287 ALA LEU ASP TRP GLU GLY GLU MET ALA VAL ILE ILE GLY SEQRES 11 A 287 LYS ARG ALA ARG ARG VAL LYS GLN ALA ASP ALA ALA GLU SEQRES 12 A 287 TYR ILE ALA GLY TYR ALA VAL MET ASN ASP TYR THR THR SEQRES 13 A 287 ARG ASP PHE GLN TYR ALA ALA PRO ALA LYS THR PRO GLN SEQRES 14 A 287 TRP HIS GLN GLY LYS SER LEU GLU LYS SER ALA GLY PHE SEQRES 15 A 287 GLY PRO TRP MET THR THR PRO ASP SER PHE GLU PHE GLY SEQRES 16 A 287 GLY GLU LEU ALA THR TYR LEU GLU GLY GLU LYS VAL GLN SEQRES 17 A 287 SER THR PRO THR ASN ASP LEU VAL PHE SER PRO GLU LYS SEQRES 18 A 287 LEU ILE GLU TYR ILE THR HIS ILE TYR PRO LEU ASP ALA SEQRES 19 A 287 GLY ASP VAL ILE VAL THR GLY THR PRO GLY GLY VAL GLY SEQRES 20 A 287 HIS ALA ARG ASN PRO GLN ARG TYR ILE GLY ASP GLY GLU SEQRES 21 A 287 THR VAL LYS VAL GLU ILE ALA GLY LEU GLY PHE ILE GLU SEQRES 22 A 287 ASN LYS THR VAL PHE GLU LEU GLU HIS HIS HIS HIS HIS SEQRES 23 A 287 HIS SEQRES 1 B 287 MET ARG LEU ALA THR ILE ARG THR ASN GLY THR THR ILE SEQRES 2 B 287 ALA ALA ARG VAL GLU SER GLU ASN THR ALA THR THR ILE SEQRES 3 B 287 GLU GLY PHE ALA ASN VAL GLY GLU LEU LEU GLN GLU SER SEQRES 4 B 287 ASN TRP ARG GLU LEU ALA GLU ASN ALA ALA GLY GLU ALA SEQRES 5 B 287 VAL THR PHE GLU ASN LYS GLU LEU ASP ALA VAL VAL PRO SEQRES 6 B 287 ALA PRO LYS LYS ILE VAL CYS VAL GLY LEU ASN TYR ALA SEQRES 7 B 287 ASN HIS ILE LYS GLU MET GLY ARG ASP LEU PRO ASP THR SEQRES 8 B 287 PRO THR LEU PHE VAL LYS PHE PRO ASP ALA LEU ILE GLY SEQRES 9 B 287 PRO PHE ASP ASP VAL VAL VAL PRO GLU TRP ALA ASN LYS SEQRES 10 B 287 ALA LEU ASP TRP GLU GLY GLU MET ALA VAL ILE ILE GLY SEQRES 11 B 287 LYS ARG ALA ARG ARG VAL LYS GLN ALA ASP ALA ALA GLU SEQRES 12 B 287 TYR ILE ALA GLY TYR ALA VAL MET ASN ASP TYR THR THR SEQRES 13 B 287 ARG ASP PHE GLN TYR ALA ALA PRO ALA LYS THR PRO GLN SEQRES 14 B 287 TRP HIS GLN GLY LYS SER LEU GLU LYS SER ALA GLY PHE SEQRES 15 B 287 GLY PRO TRP MET THR THR PRO ASP SER PHE GLU PHE GLY SEQRES 16 B 287 GLY GLU LEU ALA THR TYR LEU GLU GLY GLU LYS VAL GLN SEQRES 17 B 287 SER THR PRO THR ASN ASP LEU VAL PHE SER PRO GLU LYS SEQRES 18 B 287 LEU ILE GLU TYR ILE THR HIS ILE TYR PRO LEU ASP ALA SEQRES 19 B 287 GLY ASP VAL ILE VAL THR GLY THR PRO GLY GLY VAL GLY SEQRES 20 B 287 HIS ALA ARG ASN PRO GLN ARG TYR ILE GLY ASP GLY GLU SEQRES 21 B 287 THR VAL LYS VAL GLU ILE ALA GLY LEU GLY PHE ILE GLU SEQRES 22 B 287 ASN LYS THR VAL PHE GLU LEU GLU HIS HIS HIS HIS HIS SEQRES 23 B 287 HIS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET MN A 305 1 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET MN B 304 1 HET PYR B 305 6 HETNAM SO4 SULFATE ION HETNAM MN MANGANESE (II) ION HETNAM PYR PYRUVIC ACID FORMUL 3 SO4 7(O4 S 2-) FORMUL 7 MN 2(MN 2+) FORMUL 12 PYR C3 H4 O3 FORMUL 13 HOH *174(H2 O) HELIX 1 AA1 ASN A 31 GLN A 37 1 7 HELIX 2 AA2 ASN A 40 ASN A 47 1 8 HELIX 3 AA3 GLU A 56 LEU A 60 5 5 HELIX 4 AA4 TYR A 77 MET A 84 1 8 HELIX 5 AA5 PHE A 98 ASP A 100 5 3 HELIX 6 AA6 PRO A 112 ASN A 116 5 5 HELIX 7 AA7 LYS A 137 GLU A 143 5 7 HELIX 8 AA8 ARG A 157 TYR A 161 1 5 HELIX 9 AA9 GLN A 169 LYS A 174 5 6 HELIX 10 AB1 PRO A 189 PHE A 192 5 4 HELIX 11 AB2 SER A 218 HIS A 228 1 11 HELIX 12 AB3 VAL A 246 ARG A 250 5 5 HELIX 13 AB4 ASN B 31 GLN B 37 1 7 HELIX 14 AB5 ASN B 40 ASN B 47 1 8 HELIX 15 AB6 GLU B 56 LYS B 58 5 3 HELIX 16 AB7 TYR B 77 MET B 84 1 8 HELIX 17 AB8 PHE B 98 ASP B 100 5 3 HELIX 18 AB9 PRO B 112 ASN B 116 5 5 HELIX 19 AC1 LYS B 137 GLU B 143 5 7 HELIX 20 AC2 ARG B 157 TYR B 161 1 5 HELIX 21 AC3 GLN B 169 LYS B 174 5 6 HELIX 22 AC4 PRO B 189 PHE B 192 5 4 HELIX 23 AC5 ASN B 213 LEU B 215 5 3 HELIX 24 AC6 SER B 218 HIS B 228 1 11 HELIX 25 AC7 VAL B 246 ARG B 250 5 5 SHEET 1 AA110 ALA A 52 THR A 54 0 SHEET 2 AA110 THR A 22 ILE A 26 -1 N ALA A 23 O VAL A 53 SHEET 3 AA110 THR A 11 SER A 19 -1 N ALA A 14 O ILE A 26 SHEET 4 AA110 ARG A 2 THR A 8 -1 N THR A 8 O THR A 11 SHEET 5 AA110 ALA A 180 THR A 187 -1 O MET A 186 N LEU A 3 SHEET 6 AA110 ILE A 145 ASN A 152 -1 N VAL A 150 O GLY A 183 SHEET 7 AA110 GLY A 123 ILE A 129 -1 N ALA A 126 O ALA A 149 SHEET 8 AA110 VAL A 237 VAL A 239 -1 O ILE A 238 N VAL A 127 SHEET 9 AA110 ILE A 70 VAL A 73 1 N VAL A 71 O VAL A 237 SHEET 10 AA110 LEU A 94 VAL A 96 -1 O PHE A 95 N CYS A 72 SHEET 1 AA2 6 ALA A 52 THR A 54 0 SHEET 2 AA2 6 THR A 22 ILE A 26 -1 N ALA A 23 O VAL A 53 SHEET 3 AA2 6 THR A 11 SER A 19 -1 N ALA A 14 O ILE A 26 SHEET 4 AA2 6 ARG A 2 THR A 8 -1 N THR A 8 O THR A 11 SHEET 5 AA2 6 ALA A 180 THR A 187 -1 O MET A 186 N LEU A 3 SHEET 6 AA2 6 LEU A 102 ILE A 103 1 N ILE A 103 O ALA A 180 SHEET 1 AA3 5 VAL A 109 VAL A 111 0 SHEET 2 AA3 5 GLY A 270 PHE A 278 1 O VAL A 277 N VAL A 109 SHEET 3 AA3 5 THR A 261 ILE A 266 -1 N VAL A 262 O ASN A 274 SHEET 4 AA3 5 GLU A 197 LEU A 202 -1 N ALA A 199 O GLU A 265 SHEET 5 AA3 5 GLU A 205 PRO A 211 -1 O VAL A 207 N THR A 200 SHEET 1 AA4 2 LEU A 119 ASP A 120 0 SHEET 2 AA4 2 THR A 155 THR A 156 -1 O THR A 155 N ASP A 120 SHEET 1 AA510 ALA B 52 THR B 54 0 SHEET 2 AA510 THR B 22 ILE B 26 -1 N ALA B 23 O VAL B 53 SHEET 3 AA510 THR B 11 SER B 19 -1 N GLU B 18 O THR B 22 SHEET 4 AA510 ARG B 2 THR B 8 -1 N ARG B 2 O VAL B 17 SHEET 5 AA510 ALA B 180 THR B 187 -1 O MET B 186 N LEU B 3 SHEET 6 AA510 ILE B 145 ASN B 152 -1 N VAL B 150 O GLY B 183 SHEET 7 AA510 GLY B 123 ILE B 129 -1 N ILE B 128 O GLY B 147 SHEET 8 AA510 VAL B 237 VAL B 239 -1 O ILE B 238 N VAL B 127 SHEET 9 AA510 ILE B 70 GLY B 74 1 N VAL B 71 O VAL B 237 SHEET 10 AA510 THR B 93 VAL B 96 -1 O PHE B 95 N CYS B 72 SHEET 1 AA6 4 LEU B 60 ASP B 61 0 SHEET 2 AA6 4 ARG B 2 THR B 8 -1 N THR B 5 O ASP B 61 SHEET 3 AA6 4 ALA B 180 THR B 187 -1 O MET B 186 N LEU B 3 SHEET 4 AA6 4 LEU B 102 ILE B 103 1 N ILE B 103 O ALA B 180 SHEET 1 AA7 5 VAL B 109 VAL B 111 0 SHEET 2 AA7 5 GLY B 270 PHE B 278 1 O VAL B 277 N VAL B 109 SHEET 3 AA7 5 THR B 261 ILE B 266 -1 N VAL B 262 O ASN B 274 SHEET 4 AA7 5 GLU B 197 LEU B 202 -1 N ALA B 199 O GLU B 265 SHEET 5 AA7 5 GLU B 205 PRO B 211 -1 O THR B 210 N LEU B 198 SHEET 1 AA8 2 LEU B 119 ASP B 120 0 SHEET 2 AA8 2 THR B 155 THR B 156 -1 O THR B 155 N ASP B 120 LINK OE1 GLU A 122 MN MN A 305 1555 1555 2.18 LINK OE2 GLU A 124 MN MN A 305 1555 1555 2.09 LINK OD2 ASP A 153 MN MN A 305 1555 1555 2.24 LINK MN MN A 305 O HOH A 415 1555 1555 2.28 LINK MN MN A 305 O HOH A 482 1555 1555 2.11 LINK OE1 GLU B 122 MN MN B 304 1555 1555 2.17 LINK OE2 GLU B 124 MN MN B 304 1555 1555 1.94 LINK OD2 ASP B 153 MN MN B 304 1555 1555 2.15 LINK MN MN B 304 O PYR B 305 1555 1555 2.35 LINK MN MN B 304 O3 PYR B 305 1555 1555 2.14 LINK MN MN B 304 O HOH B 428 1555 1555 2.31 CISPEP 1 ALA A 163 PRO A 164 0 -10.71 CISPEP 2 GLY A 183 PRO A 184 0 1.50 CISPEP 3 ASN A 251 PRO A 252 0 -0.97 CISPEP 4 ALA B 163 PRO B 164 0 -13.26 CISPEP 5 GLY B 183 PRO B 184 0 -1.31 CISPEP 6 ASN B 251 PRO B 252 0 2.89 SITE 1 AC1 4 ARG A 42 THR A 188 PRO A 189 ASP A 190 SITE 1 AC2 3 PHE A 192 GLU A 193 PHE A 194 SITE 1 AC3 5 PRO A 164 ALA A 165 LYS A 166 ARG B 86 SITE 2 AC3 5 ASP B 87 SITE 1 AC4 3 ARG A 2 SER A 19 GLU A 20 SITE 1 AC5 6 GLU A 122 GLU A 124 ASP A 153 LYS A 174 SITE 2 AC5 6 HOH A 415 HOH A 482 SITE 1 AC6 5 ARG B 2 SER B 19 GLU B 20 ARG B 132 SITE 2 AC6 5 HOH B 474 SITE 1 AC7 4 PRO A 89 HOH A 432 PRO B 164 ALA B 165 SITE 1 AC8 6 MET B 1 ARG B 2 ARG B 16 SER B 191 SITE 2 AC8 6 HOH B 437 HOH B 469 SITE 1 AC9 5 GLU B 122 GLU B 124 ASP B 153 PYR B 305 SITE 2 AC9 5 HOH B 428 SITE 1 AD1 15 VAL B 73 GLY B 74 LEU B 75 HIS B 80 SITE 2 AD1 15 PHE B 95 GLU B 122 GLU B 124 ASP B 153 SITE 3 AD1 15 TRP B 170 LYS B 174 GLY B 241 THR B 242 SITE 4 AD1 15 MN B 304 HOH B 430 HOH B 431 CRYST1 66.621 71.296 112.260 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015010 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014026 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008908 0.00000