HEADER METAL TRANSPORT 15-JAN-19 6J6P TITLE CRYSTAL STRUCTURE OF DIAMONDBACK MOTH RYANODINE RECEPTOR TITLE 2 PHOSPHORYLATION DOMAIN(2836-3050) MUTANT S2946D COMPND MOL_ID: 1; COMPND 2 MOLECULE: RYANODINE RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PHOSPHORYLATION DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLUTELLA XYLOSTELLA; SOURCE 3 ORGANISM_COMMON: DIAMONDBACK MOTH; SOURCE 4 ORGANISM_TAXID: 51655; SOURCE 5 GENE: RYR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DIAMONDBACK MOTH, RYANODINE RECEPTOR, PHOSPHORYLATION DOMAIN, KEYWDS 2 TRANSPORT PROTEIN, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR T.XU,L.LIN,Z.YUCHI REVDAT 4 22-NOV-23 6J6P 1 REMARK REVDAT 3 23-OCT-19 6J6P 1 JRNL REVDAT 2 16-OCT-19 6J6P 1 JRNL REVDAT 1 04-SEP-19 6J6P 0 JRNL AUTH T.XU,Z.YUCHI JRNL TITL CRYSTAL STRUCTURE OF DIAMONDBACK MOTH RYANODINE RECEPTOR JRNL TITL 2 REPEAT34 DOMAIN REVEALS INSECT-SPECIFIC PHOSPHORYLATION JRNL TITL 3 SITES. JRNL REF BMC BIOL. V. 17 77 2019 JRNL REFN ESSN 1741-7007 JRNL PMID 31597572 JRNL DOI 10.1186/S12915-019-0698-5 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3247 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 36583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.490 REMARK 3 FREE R VALUE TEST SET COUNT : 2007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4884 - 3.6863 1.00 2663 155 0.1728 0.1971 REMARK 3 2 3.6863 - 2.9266 1.00 2531 145 0.1736 0.2204 REMARK 3 3 2.9266 - 2.5568 1.00 2515 147 0.1857 0.2281 REMARK 3 4 2.5568 - 2.3231 1.00 2492 138 0.1874 0.2104 REMARK 3 5 2.3231 - 2.1566 1.00 2485 144 0.1846 0.2317 REMARK 3 6 2.1566 - 2.0295 1.00 2477 142 0.1960 0.2440 REMARK 3 7 2.0295 - 1.9279 1.00 2444 145 0.2087 0.2630 REMARK 3 8 1.9279 - 1.8440 1.00 2463 143 0.2101 0.2271 REMARK 3 9 1.8440 - 1.7730 1.00 2451 144 0.2216 0.2335 REMARK 3 10 1.7730 - 1.7118 1.00 2444 144 0.2450 0.2690 REMARK 3 11 1.7118 - 1.6583 1.00 2422 143 0.2525 0.2879 REMARK 3 12 1.6583 - 1.6109 1.00 2427 142 0.2318 0.2600 REMARK 3 13 1.6109 - 1.5685 1.00 2440 138 0.2292 0.2714 REMARK 3 14 1.5685 - 1.5302 0.95 2322 137 0.2415 0.2442 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J6P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300009418. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36640 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4ETV, 5C30 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% V/V PEG 400, 0.1M SODIUM HEPES PH REMARK 280 7.5, 2.0M AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.85067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.70133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 87.70133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.85067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 ASN A 2836 REMARK 465 PRO A 2837 REMARK 465 GLU A 2931 REMARK 465 VAL A 2932 REMARK 465 ASP A 2933 REMARK 465 ILE A 2934 REMARK 465 PRO A 2935 REMARK 465 SER A 2936 REMARK 465 THR A 2937 REMARK 465 ASN A 2938 REMARK 465 ARG A 2939 REMARK 465 SER A 2940 REMARK 465 SER A 2941 REMARK 465 MET A 2942 REMARK 465 ARG A 2943 REMARK 465 ARG A 2944 REMARK 465 GLN A 2945 REMARK 465 ASP A 2946 REMARK 465 LYS A 2947 REMARK 465 SER A 2948 REMARK 465 GLY A 2949 REMARK 465 GLY A 2950 REMARK 465 ARG A 2951 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A2838 CG CD OE1 NE2 REMARK 470 ARG A2908 CG CD NE CZ NH1 NH2 REMARK 470 GLU A2928 CG CD OE1 OE2 REMARK 470 SER A2930 OG REMARK 470 ASP A2954 CG OD1 OD2 REMARK 470 ASN A2974 CG OD1 ND2 REMARK 470 LYS A2999 CG CD CE NZ REMARK 470 LYS A3028 CG CD CE NZ REMARK 470 LYS A3046 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3295 O HOH A 3357 2.03 REMARK 500 O HOH A 3241 O HOH A 3380 2.16 REMARK 500 O HOH A 3367 O HOH A 3398 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3321 O HOH A 3386 5554 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A2920 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A2848 -15.21 77.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 3101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 3102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 3103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 3111 DBREF 6J6P A 2836 3050 UNP I3NWV8 I3NWV8_PLUXY 2836 3050 SEQADV 6J6P SER A -2 UNP I3NWV8 EXPRESSION TAG SEQADV 6J6P ASN A -1 UNP I3NWV8 EXPRESSION TAG SEQADV 6J6P ALA A 0 UNP I3NWV8 EXPRESSION TAG SEQADV 6J6P ASP A 2946 UNP I3NWV8 SER 2946 ENGINEERED MUTATION SEQADV 6J6P ALA A 3023 UNP I3NWV8 ASP 3023 ENGINEERED MUTATION SEQADV 6J6P ALA A 3024 UNP I3NWV8 LYS 3024 ENGINEERED MUTATION SEQADV 6J6P ALA A 3027 UNP I3NWV8 LYS 3027 ENGINEERED MUTATION SEQRES 1 A 218 SER ASN ALA ASN PRO GLN TYR ASN PRO GLN PRO ILE ASN SEQRES 2 A 218 THR SER SER VAL ALA LEU ASN ASN ASP LEU ASN THR ILE SEQRES 3 A 218 VAL GLN LYS PHE SER GLU HIS TYR HIS ASP ALA TRP ALA SEQRES 4 A 218 SER ARG LYS ILE GLU ASN SER TRP VAL TYR GLY GLU ASN SEQRES 5 A 218 TRP SER ASP SER GLN LYS ALA HIS PRO ARG LEU LYS PRO SEQRES 6 A 218 TYR ASN MET LEU ASN ASP TYR GLU LYS GLU ARG TYR LYS SEQRES 7 A 218 GLU PRO VAL ARG GLU SER LEU LYS ALA LEU LEU ALA ILE SEQRES 8 A 218 GLY TRP SER VAL GLU HIS SER GLU VAL ASP ILE PRO SER SEQRES 9 A 218 THR ASN ARG SER SER MET ARG ARG GLN ASP LYS SER GLY SEQRES 10 A 218 GLY ARG PRO VAL ASP VAL VAL THR ASP SER ALA THR PRO SEQRES 11 A 218 PHE ASN TYR ASN PRO HIS PRO VAL ASP MET THR ASN LEU SEQRES 12 A 218 THR LEU SER ARG GLU MET GLN ASN MET ALA GLU ARG LEU SEQRES 13 A 218 ALA GLU ASN ALA HIS ASP ILE TRP ALA LYS LYS LYS LYS SEQRES 14 A 218 GLU GLU LEU THR VAL ASN GLY GLY GLY ILE HIS PRO GLN SEQRES 15 A 218 LEU VAL PRO TYR ASP LEU LEU THR ALA ALA GLU LYS ALA SEQRES 16 A 218 LYS ASP ARG GLU ARG SER GLN GLU PHE LEU LYS TYR LEU SEQRES 17 A 218 GLN TYR GLN GLY TYR LYS LEU HIS ARG PRO HET EPE A3101 15 HET CL A3102 1 HET CL A3103 1 HET GOL A3104 6 HET GOL A3105 6 HET GOL A3106 6 HET GOL A3107 6 HET GOL A3108 6 HET GOL A3109 6 HET GOL A3110 6 HET GOL A3111 6 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN EPE HEPES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 CL 2(CL 1-) FORMUL 5 GOL 8(C3 H8 O3) FORMUL 13 HOH *214(H2 O) HELIX 1 AA1 ASN A 2852 ASN A 2877 1 26 HELIX 2 AA2 PRO A 2897 LEU A 2901 5 5 HELIX 3 AA3 ASN A 2902 ILE A 2923 1 22 HELIX 4 AA4 ASP A 2954 SER A 2959 1 6 HELIX 5 AA5 SER A 2978 ASN A 3007 1 30 HELIX 6 AA6 PRO A 3017 LEU A 3021 5 5 HELIX 7 AA7 THR A 3022 GLN A 3043 1 22 SHEET 1 AA1 2 VAL A2880 TYR A2881 0 SHEET 2 AA1 2 ALA A2891 HIS A2892 1 O HIS A2892 N VAL A2880 SHEET 1 AA2 2 SER A2926 HIS A2929 0 SHEET 2 AA2 2 TYR A3045 HIS A3048 -1 O LYS A3046 N GLU A2928 SITE 1 AC1 8 TRP A2870 ARG A2873 LYS A2874 HIS A2892 SITE 2 AC1 8 ARG A2894 GOL A3104 HOH A3270 HOH A3310 SITE 1 AC2 1 ASN A2853 SITE 1 AC3 2 GLN A2860 LYS A2910 SITE 1 AC4 7 TYR A2866 TRP A2870 ARG A2908 TYR A2909 SITE 2 AC4 7 ARG A3032 EPE A3101 HOH A3237 SITE 1 AC5 4 PRO A3013 GLN A3014 LEU A3020 GLU A3025 SITE 1 AC6 9 ALA A2869 PRO A2969 VAL A2970 ASP A2971 SITE 2 AC6 9 MET A2972 ALA A3023 GLU A3035 HOH A3220 SITE 3 AC6 9 HOH A3254 SITE 1 AC7 3 SER A2886 ASP A2887 SER A2888 SITE 1 AC8 4 HIS A2993 GLN A3014 GOL A3110 HOH A3247 SITE 1 AC9 5 ILE A2844 ASN A2845 HOH A3209 HOH A3255 SITE 2 AC9 5 HOH A3291 SITE 1 AD1 4 TRP A2996 LYS A3000 HIS A3012 GOL A3108 SITE 1 AD2 4 LYS A2874 ASN A2877 TRP A2879 LYS A2890 CRYST1 55.828 55.828 131.552 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017912 0.010342 0.000000 0.00000 SCALE2 0.000000 0.020683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007602 0.00000