HEADER OXIDOREDUCTASE 17-JAN-19 6J76 TITLE STRUCTURE OF 3,6-ANHYDRO-L-GALACTOSE DEHYDROGENASE IN COMPLEX WITH NAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE DEHYDROGENASE A; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.2.1.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VARIABILIS; SOURCE 3 ORGANISM_TAXID: 990271; SOURCE 4 GENE: JCM19239_2055; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ALDEHYDE DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.Y.LI,Y.WANG,X.L.CHEN,Y.Z.ZHANG REVDAT 3 22-NOV-23 6J76 1 REMARK REVDAT 2 05-AUG-20 6J76 1 JRNL REVDAT 1 22-JAN-20 6J76 0 JRNL AUTH Y.WANG,P.Y.LI,Y.ZHANG,H.Y.CAO,Y.J.WANG,C.Y.LI,P.WANG,H.N.SU, JRNL AUTH 2 Y.CHEN,X.L.CHEN,Y.Z.ZHANG JRNL TITL 3,6-ANHYDRO-L-GALACTOSE DEHYDROGENASE VVAHGD IS A MEMBER OF JRNL TITL 2 A NEW ALDEHYDE DEHYDROGENASE FAMILY AND CATALYZES BY A NOVEL JRNL TITL 3 MECHANISM WITH CONFORMATIONAL SWITCH OF TWO CATALYTIC JRNL TITL 4 RESIDUES CYSTEINE 282 AND GLUTAMATE 248. JRNL REF J.MOL.BIOL. V. 432 2186 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 32087198 JRNL DOI 10.1016/J.JMB.2020.02.008 REMARK 2 REMARK 2 RESOLUTION. 2.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 42552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 2071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9923 - 5.8366 0.98 2876 149 0.1891 0.1943 REMARK 3 2 5.8366 - 4.6341 1.00 2771 147 0.1620 0.2073 REMARK 3 3 4.6341 - 4.0487 1.00 2734 145 0.1357 0.1700 REMARK 3 4 4.0487 - 3.6787 1.00 2751 137 0.1410 0.1915 REMARK 3 5 3.6787 - 3.4151 1.00 2707 147 0.1520 0.2105 REMARK 3 6 3.4151 - 3.2138 1.00 2697 150 0.1612 0.2016 REMARK 3 7 3.2138 - 3.0529 1.00 2698 136 0.1607 0.1984 REMARK 3 8 3.0529 - 2.9200 1.00 2743 112 0.1665 0.2037 REMARK 3 9 2.9200 - 2.8076 1.00 2682 145 0.1590 0.1954 REMARK 3 10 2.8076 - 2.7108 1.00 2715 122 0.1622 0.1925 REMARK 3 11 2.7108 - 2.6260 1.00 2678 142 0.1701 0.2625 REMARK 3 12 2.6260 - 2.5509 1.00 2684 133 0.1647 0.2183 REMARK 3 13 2.5509 - 2.4838 1.00 2696 135 0.1693 0.1993 REMARK 3 14 2.4838 - 2.4232 1.00 2651 146 0.1705 0.2675 REMARK 3 15 2.4232 - 2.3681 0.89 2398 125 0.1756 0.2486 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7598 REMARK 3 ANGLE : 1.053 10312 REMARK 3 CHIRALITY : 0.052 1133 REMARK 3 PLANARITY : 0.005 1350 REMARK 3 DIHEDRAL : 18.472 4632 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42618 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.368 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.16500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 44.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6J75 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAAC, SODIUM CACODYLATE TRIHYDRATE, REMARK 280 PEG 8,000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.36850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.52600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.36850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 74.52600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASN A 480 REMARK 465 LEU A 481 REMARK 465 GLU A 482 REMARK 465 HIS A 483 REMARK 465 HIS A 484 REMARK 465 HIS A 485 REMARK 465 HIS A 486 REMARK 465 HIS A 487 REMARK 465 HIS A 488 REMARK 465 MET B 1 REMARK 465 TYR B 479 REMARK 465 ASN B 480 REMARK 465 LEU B 481 REMARK 465 GLU B 482 REMARK 465 HIS B 483 REMARK 465 HIS B 484 REMARK 465 HIS B 485 REMARK 465 HIS B 486 REMARK 465 HIS B 487 REMARK 465 HIS B 488 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 5 -164.08 -107.78 REMARK 500 ASP A 37 69.55 -113.02 REMARK 500 ASP A 39 -158.93 -111.74 REMARK 500 THR A 208 -76.90 -107.35 REMARK 500 LEU A 249 -148.20 -114.88 REMARK 500 LYS A 252 59.01 -152.12 REMARK 500 GLU A 358 -25.95 121.88 REMARK 500 SER A 407 144.17 -174.78 REMARK 500 LEU A 411 -83.43 -93.28 REMARK 500 LYS A 453 -137.56 58.67 REMARK 500 THR A 457 -117.37 -90.52 REMARK 500 ASP A 461 164.58 77.74 REMARK 500 ASP B 39 -161.75 -119.00 REMARK 500 THR B 208 -74.29 -114.90 REMARK 500 LEU B 249 -144.26 -119.27 REMARK 500 GLN B 280 64.51 -101.37 REMARK 500 ASN B 285 101.77 -56.51 REMARK 500 GLU B 358 0.42 -67.32 REMARK 500 PHE B 359 29.72 -140.54 REMARK 500 LEU B 411 -93.05 -88.51 REMARK 500 LYS B 453 -125.42 60.32 REMARK 500 ASP B 461 167.32 81.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 501 DBREF1 6J76 A 1 480 UNP A0A090SK43_9VIBR DBREF2 6J76 A A0A090SK43 1 480 DBREF1 6J76 B 1 480 UNP A0A090SK43_9VIBR DBREF2 6J76 B A0A090SK43 1 480 SEQADV 6J76 LEU A 481 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 GLU A 482 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 483 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 484 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 485 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 486 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 487 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS A 488 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 LEU B 481 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 GLU B 482 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 483 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 484 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 485 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 486 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 487 UNP A0A090SK4 EXPRESSION TAG SEQADV 6J76 HIS B 488 UNP A0A090SK4 EXPRESSION TAG SEQRES 1 A 488 MET LYS GLN TYR GLN MET TYR VAL GLY GLY GLU TRP ILE SEQRES 2 A 488 ASP ALA SER ASN GLY GLN THR GLU PRO VAL VAL SER PRO SEQRES 3 A 488 ILE ASN GLU GLU VAL LEU ALA TYR ILE GLN ASP ALA ASP SEQRES 4 A 488 ALA SER ASP ALA GLU ARG VAL LEU ALA VAL ALA THR THR SEQRES 5 A 488 ALA GLN LYS GLU TRP ALA LYS GLN PRO ALA ARG GLN ARG SEQRES 6 A 488 ALA GLU VAL LEU ARG LYS PHE ALA GLN LEU ILE ARG ASP SEQRES 7 A 488 ASN LYS GLN TYR LEU ALA GLU LEU LEU VAL LYS GLU GLN SEQRES 8 A 488 GLY LYS LEU LEU LYS VAL ALA LEU GLY GLU VAL GLU ALA SEQRES 9 A 488 THR SER THR PHE ILE GLU TYR ALA CYS ASP TRP ALA ARG SEQRES 10 A 488 GLN MET ASP GLY ASP ILE VAL LYS SER ASP ASN ALA ASN SEQRES 11 A 488 GLU GLN ILE MET ILE HIS LYS ILE PRO ARG GLY VAL VAL SEQRES 12 A 488 VAL ALA ILE THR ALA TRP ASN PHE PRO LEU ALA LEU ALA SEQRES 13 A 488 GLY ARG LYS ILE GLY PRO ALA LEU VAL ALA GLY ASN SER SEQRES 14 A 488 ILE VAL VAL LYS PRO THR SER GLU THR PRO LEU ALA THR SEQRES 15 A 488 LEU GLU LEU GLY TYR LEU ALA GLU GLN ALA GLY ILE PRO SEQRES 16 A 488 ALA GLY VAL LEU ASN ILE VAL THR GLY GLY GLY ARG THR SEQRES 17 A 488 LEU GLY ASN GLU LEU VAL GLY HIS ARG MET THR ASN MET SEQRES 18 A 488 VAL SER MET THR GLY SER THR PRO ALA GLY GLN SER ILE SEQRES 19 A 488 ILE ARG ALA SER ALA ASN ASN MET ALA HIS VAL GLN LEU SEQRES 20 A 488 GLU LEU GLY GLY LYS ALA PRO PHE ILE VAL MET GLU ASP SEQRES 21 A 488 ALA ASP LEU GLU GLN ALA ALA ALA ALA ALA LEU HIS SER SEQRES 22 A 488 ARG PHE ASP ASN CYS GLY GLN VAL CYS THR CYS ASN GLU SEQRES 23 A 488 ARG MET TYR VAL HIS GLY ALA VAL TYR ASP GLU PHE MET SEQRES 24 A 488 ARG ILE PHE MET GLY LYS VAL GLU ALA ILE LYS VAL GLY SEQRES 25 A 488 ASP PRO MET ASP PRO ALA SER ASP MET GLY PRO LYS VAL SEQRES 26 A 488 ASN ALA ASN GLU LEU ALA HIS MET GLU GLU LEU VAL ALA SEQRES 27 A 488 GLU ALA VAL ASP GLU GLY ALA THR VAL LEU PHE GLY GLY SEQRES 28 A 488 LYS LYS LEU GLU GLY PRO GLU PHE GLU LYS GLY PHE TRP SEQRES 29 A 488 PHE GLU PRO THR VAL LEU THR ASN VAL THR GLN ASP MET SEQRES 30 A 488 THR ILE VAL HIS GLU GLU SER PHE GLY PRO ILE LEU PRO SEQRES 31 A 488 VAL ILE LYS PHE ASP SER PHE ASP GLU VAL ILE GLU TYR SEQRES 32 A 488 ALA ASN ASP SER ASP TYR GLY LEU ALA ALA MET ILE CYS SEQRES 33 A 488 THR GLN ASN MET HIS TYR ILE ASN ARG LEU LEU THR GLU SEQRES 34 A 488 LEU GLU SER GLY GLU ILE TYR VAL ASN ARG GLY HIS GLY SEQRES 35 A 488 GLU GLN HIS GLN GLY PHE HIS ASN GLY TYR LYS LEU SER SEQRES 36 A 488 GLY THR GLY GLY GLU ASP GLY LYS TYR GLY PHE GLU GLN SEQRES 37 A 488 TYR LEU GLU LYS LYS THR PHE TYR ILE ASN TYR ASN LEU SEQRES 38 A 488 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 488 MET LYS GLN TYR GLN MET TYR VAL GLY GLY GLU TRP ILE SEQRES 2 B 488 ASP ALA SER ASN GLY GLN THR GLU PRO VAL VAL SER PRO SEQRES 3 B 488 ILE ASN GLU GLU VAL LEU ALA TYR ILE GLN ASP ALA ASP SEQRES 4 B 488 ALA SER ASP ALA GLU ARG VAL LEU ALA VAL ALA THR THR SEQRES 5 B 488 ALA GLN LYS GLU TRP ALA LYS GLN PRO ALA ARG GLN ARG SEQRES 6 B 488 ALA GLU VAL LEU ARG LYS PHE ALA GLN LEU ILE ARG ASP SEQRES 7 B 488 ASN LYS GLN TYR LEU ALA GLU LEU LEU VAL LYS GLU GLN SEQRES 8 B 488 GLY LYS LEU LEU LYS VAL ALA LEU GLY GLU VAL GLU ALA SEQRES 9 B 488 THR SER THR PHE ILE GLU TYR ALA CYS ASP TRP ALA ARG SEQRES 10 B 488 GLN MET ASP GLY ASP ILE VAL LYS SER ASP ASN ALA ASN SEQRES 11 B 488 GLU GLN ILE MET ILE HIS LYS ILE PRO ARG GLY VAL VAL SEQRES 12 B 488 VAL ALA ILE THR ALA TRP ASN PHE PRO LEU ALA LEU ALA SEQRES 13 B 488 GLY ARG LYS ILE GLY PRO ALA LEU VAL ALA GLY ASN SER SEQRES 14 B 488 ILE VAL VAL LYS PRO THR SER GLU THR PRO LEU ALA THR SEQRES 15 B 488 LEU GLU LEU GLY TYR LEU ALA GLU GLN ALA GLY ILE PRO SEQRES 16 B 488 ALA GLY VAL LEU ASN ILE VAL THR GLY GLY GLY ARG THR SEQRES 17 B 488 LEU GLY ASN GLU LEU VAL GLY HIS ARG MET THR ASN MET SEQRES 18 B 488 VAL SER MET THR GLY SER THR PRO ALA GLY GLN SER ILE SEQRES 19 B 488 ILE ARG ALA SER ALA ASN ASN MET ALA HIS VAL GLN LEU SEQRES 20 B 488 GLU LEU GLY GLY LYS ALA PRO PHE ILE VAL MET GLU ASP SEQRES 21 B 488 ALA ASP LEU GLU GLN ALA ALA ALA ALA ALA LEU HIS SER SEQRES 22 B 488 ARG PHE ASP ASN CYS GLY GLN VAL CYS THR CYS ASN GLU SEQRES 23 B 488 ARG MET TYR VAL HIS GLY ALA VAL TYR ASP GLU PHE MET SEQRES 24 B 488 ARG ILE PHE MET GLY LYS VAL GLU ALA ILE LYS VAL GLY SEQRES 25 B 488 ASP PRO MET ASP PRO ALA SER ASP MET GLY PRO LYS VAL SEQRES 26 B 488 ASN ALA ASN GLU LEU ALA HIS MET GLU GLU LEU VAL ALA SEQRES 27 B 488 GLU ALA VAL ASP GLU GLY ALA THR VAL LEU PHE GLY GLY SEQRES 28 B 488 LYS LYS LEU GLU GLY PRO GLU PHE GLU LYS GLY PHE TRP SEQRES 29 B 488 PHE GLU PRO THR VAL LEU THR ASN VAL THR GLN ASP MET SEQRES 30 B 488 THR ILE VAL HIS GLU GLU SER PHE GLY PRO ILE LEU PRO SEQRES 31 B 488 VAL ILE LYS PHE ASP SER PHE ASP GLU VAL ILE GLU TYR SEQRES 32 B 488 ALA ASN ASP SER ASP TYR GLY LEU ALA ALA MET ILE CYS SEQRES 33 B 488 THR GLN ASN MET HIS TYR ILE ASN ARG LEU LEU THR GLU SEQRES 34 B 488 LEU GLU SER GLY GLU ILE TYR VAL ASN ARG GLY HIS GLY SEQRES 35 B 488 GLU GLN HIS GLN GLY PHE HIS ASN GLY TYR LYS LEU SER SEQRES 36 B 488 GLY THR GLY GLY GLU ASP GLY LYS TYR GLY PHE GLU GLN SEQRES 37 B 488 TYR LEU GLU LYS LYS THR PHE TYR ILE ASN TYR ASN LEU SEQRES 38 B 488 GLU HIS HIS HIS HIS HIS HIS HET NAP A 501 48 HET NAP B 501 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *560(H2 O) HELIX 1 AA1 ASP A 39 SER A 41 5 3 HELIX 2 AA2 ASP A 42 GLN A 60 1 19 HELIX 3 AA3 PRO A 61 ASN A 79 1 19 HELIX 4 AA4 ASN A 79 GLY A 92 1 14 HELIX 5 AA5 LEU A 94 ASP A 114 1 21 HELIX 6 AA6 TRP A 115 GLN A 118 5 4 HELIX 7 AA7 PHE A 151 ALA A 166 1 16 HELIX 8 AA8 PRO A 179 GLY A 193 1 15 HELIX 9 AA9 THR A 208 HIS A 216 1 9 HELIX 10 AB1 SER A 227 SER A 238 1 12 HELIX 11 AB2 ASP A 262 ASP A 276 1 15 HELIX 12 AB3 ASN A 277 GLN A 280 5 4 HELIX 13 AB4 VAL A 294 ALA A 308 1 15 HELIX 14 AB5 ASN A 326 GLY A 344 1 19 HELIX 15 AB6 MET A 377 HIS A 381 5 5 HELIX 16 AB7 SER A 396 ASP A 406 1 11 HELIX 17 AB8 ASN A 419 LEU A 430 1 12 HELIX 18 AB9 ASP A 461 GLU A 467 1 7 HELIX 19 AC1 ASP B 39 SER B 41 5 3 HELIX 20 AC2 ASP B 42 GLN B 60 1 19 HELIX 21 AC3 PRO B 61 ASN B 79 1 19 HELIX 22 AC4 ASN B 79 GLY B 92 1 14 HELIX 23 AC5 LEU B 94 ASP B 114 1 21 HELIX 24 AC6 TRP B 115 GLN B 118 5 4 HELIX 25 AC7 PHE B 151 ALA B 166 1 16 HELIX 26 AC8 PRO B 179 GLY B 193 1 15 HELIX 27 AC9 THR B 208 GLY B 215 1 8 HELIX 28 AD1 SER B 227 ALA B 239 1 13 HELIX 29 AD2 ASP B 262 ASP B 276 1 15 HELIX 30 AD3 ASN B 277 GLN B 280 5 4 HELIX 31 AD4 VAL B 294 ALA B 308 1 15 HELIX 32 AD5 ASN B 326 GLU B 343 1 18 HELIX 33 AD6 GLY B 356 GLU B 360 5 5 HELIX 34 AD7 MET B 377 HIS B 381 5 5 HELIX 35 AD8 SER B 396 ASP B 406 1 11 HELIX 36 AD9 ASN B 419 LEU B 430 1 12 HELIX 37 AE1 ASP B 461 GLU B 467 1 7 SHEET 1 AA1 2 MET A 6 VAL A 8 0 SHEET 2 AA1 2 GLU A 11 ILE A 13 -1 O ILE A 13 N MET A 6 SHEET 1 AA2 2 THR A 20 VAL A 24 0 SHEET 2 AA2 2 VAL A 31 GLN A 36 -1 O LEU A 32 N VAL A 23 SHEET 1 AA310 ASP A 122 LYS A 125 0 SHEET 2 AA310 GLU A 131 PRO A 139 -1 O ILE A 135 N ASP A 122 SHEET 3 AA310 LEU A 470 ASN A 478 -1 O LYS A 473 N HIS A 136 SHEET 4 AA310 GLU B 434 VAL B 437 1 O ILE B 435 N THR A 474 SHEET 5 AA310 ALA B 412 CYS B 416 1 N ALA B 413 O TYR B 436 SHEET 6 AA310 ALA B 253 VAL B 257 1 N ILE B 256 O MET B 414 SHEET 7 AA310 ASN B 285 HIS B 291 1 O TYR B 289 N VAL B 257 SHEET 8 AA310 ILE B 388 PHE B 394 1 O PRO B 390 N MET B 288 SHEET 9 AA310 THR B 368 THR B 371 1 N THR B 368 O LEU B 389 SHEET 10 AA310 THR B 346 PHE B 349 -1 N THR B 346 O THR B 371 SHEET 1 AA4 5 LEU A 199 ILE A 201 0 SHEET 2 AA4 5 SER A 169 LYS A 173 1 N VAL A 172 O ASN A 200 SHEET 3 AA4 5 VAL A 142 ILE A 146 1 N ALA A 145 O LYS A 173 SHEET 4 AA4 5 MET A 221 THR A 225 1 O MET A 221 N VAL A 144 SHEET 5 AA4 5 HIS A 244 GLU A 248 1 O GLN A 246 N VAL A 222 SHEET 1 AA510 THR A 346 PHE A 349 0 SHEET 2 AA510 THR A 368 THR A 371 -1 O THR A 371 N THR A 346 SHEET 3 AA510 ILE A 388 PHE A 394 1 O LEU A 389 N LEU A 370 SHEET 4 AA510 ASN A 285 HIS A 291 1 N MET A 288 O ILE A 392 SHEET 5 AA510 ALA A 253 VAL A 257 1 N PHE A 255 O TYR A 289 SHEET 6 AA510 ALA A 412 CYS A 416 1 O MET A 414 N ILE A 256 SHEET 7 AA510 GLU A 434 VAL A 437 1 O TYR A 436 N ALA A 413 SHEET 8 AA510 LEU B 470 ILE B 477 1 O THR B 474 N ILE A 435 SHEET 9 AA510 GLN B 132 PRO B 139 -1 N ILE B 138 O GLU B 471 SHEET 10 AA510 ASP B 122 LYS B 125 -1 N VAL B 124 O ILE B 133 SHEET 1 AA6 2 TYR A 409 GLY A 410 0 SHEET 2 AA6 2 TYR A 452 LYS A 453 -1 O TYR A 452 N GLY A 410 SHEET 1 AA7 2 MET B 6 VAL B 8 0 SHEET 2 AA7 2 GLU B 11 ILE B 13 -1 O ILE B 13 N MET B 6 SHEET 1 AA8 2 THR B 20 VAL B 24 0 SHEET 2 AA8 2 VAL B 31 GLN B 36 -1 O LEU B 32 N VAL B 23 SHEET 1 AA9 6 LEU B 199 ILE B 201 0 SHEET 2 AA9 6 SER B 169 LYS B 173 1 N VAL B 172 O ASN B 200 SHEET 3 AA9 6 VAL B 142 ILE B 146 1 N ALA B 145 O LYS B 173 SHEET 4 AA9 6 MET B 221 THR B 225 1 O MET B 221 N VAL B 144 SHEET 5 AA9 6 HIS B 244 GLU B 248 1 O GLN B 246 N VAL B 222 SHEET 6 AA9 6 GLY B 456 THR B 457 -1 O THR B 457 N LEU B 247 SHEET 1 AB1 2 TYR B 409 GLY B 410 0 SHEET 2 AB1 2 TYR B 452 LYS B 453 -1 O TYR B 452 N GLY B 410 SITE 1 AC1 30 ILE A 146 THR A 147 ALA A 148 TRP A 149 SITE 2 AC1 30 ASN A 150 LYS A 173 THR A 175 SER A 176 SITE 3 AC1 30 GLY A 204 GLY A 206 GLY A 210 THR A 225 SITE 4 AC1 30 GLY A 226 SER A 227 ALA A 230 SER A 233 SITE 5 AC1 30 GLU A 248 LEU A 249 GLY A 250 CYS A 282 SITE 6 AC1 30 GLU A 383 PHE A 385 LEU A 411 HIS A 449 SITE 7 AC1 30 HOH A 613 HOH A 616 HOH A 696 HOH A 728 SITE 8 AC1 30 HOH A 750 HOH A 757 SITE 1 AC2 34 ILE B 146 THR B 147 ALA B 148 TRP B 149 SITE 2 AC2 34 ASN B 150 LYS B 173 THR B 175 SER B 176 SITE 3 AC2 34 GLY B 204 GLY B 206 ARG B 207 GLY B 210 SITE 4 AC2 34 ASN B 211 THR B 225 GLY B 226 SER B 227 SITE 5 AC2 34 ALA B 230 SER B 233 GLU B 248 LEU B 249 SITE 6 AC2 34 CYS B 282 GLU B 383 PHE B 385 LEU B 411 SITE 7 AC2 34 HIS B 449 HOH B 608 HOH B 614 HOH B 618 SITE 8 AC2 34 HOH B 636 HOH B 656 HOH B 666 HOH B 687 SITE 9 AC2 34 HOH B 700 HOH B 766 CRYST1 76.378 90.737 149.052 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013093 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011021 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006709 0.00000