data_6JEC # _entry.id 6JEC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6JEC WWPDB D_1300010963 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JEC _pdbx_database_status.recvd_initial_deposition_date 2019-02-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, X.' 1 ? 'Zhu, Y.' 2 ? 'Ye, S.' 3 ? 'Zhang, R.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of a triple-helix region of human collagen type II.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, X.' 1 ? primary 'Zhu, Y.' 2 ? primary 'Ye, S.' 3 ? primary 'Zhang, R.' 4 ? primary 'Lu, L.' 5 ? # _cell.angle_alpha 102.76 _cell.angle_alpha_esd ? _cell.angle_beta 92.14 _cell.angle_beta_esd ? _cell.angle_gamma 113.97 _cell.angle_gamma_esd ? _cell.entry_id 6JEC _cell.details ? _cell.formula_units_Z ? _cell.length_a 19.360 _cell.length_a_esd ? _cell.length_b 22.990 _cell.length_b_esd ? _cell.length_c 39.909 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 3 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'human collagen type II' 2739.927 3 ? ? ? ? 2 water nat water 18.015 127 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)P(HYP)GP(HYP)GP(HYP)GRAGEPGLQGPAGP(HYP)GP(HYP)GP(HYP)G' _entity_poly.pdbx_seq_one_letter_code_can XPPGPPGPPGRAGEPGLQGPAGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 PRO n 1 3 HYP n 1 4 GLY n 1 5 PRO n 1 6 HYP n 1 7 GLY n 1 8 PRO n 1 9 HYP n 1 10 GLY n 1 11 ARG n 1 12 ALA n 1 13 GLY n 1 14 GLU n 1 15 PRO n 1 16 GLY n 1 17 LEU n 1 18 GLN n 1 19 GLY n 1 20 PRO n 1 21 ALA n 1 22 GLY n 1 23 PRO n 1 24 HYP n 1 25 GLY n 1 26 PRO n 1 27 HYP n 1 28 GLY n 1 29 PRO n 1 30 HYP n 1 31 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 31 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6JEC _struct_ref.pdbx_db_accession 6JEC _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JEC A 1 ? 31 ? 6JEC 0 ? 30 ? 0 30 2 1 6JEC B 1 ? 31 ? 6JEC 0 ? 30 ? 0 30 3 1 6JEC C 1 ? 31 ? 6JEC 0 ? 30 ? 0 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JEC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Sodium Acetate 20%(w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-01 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6JEC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.049 _reflns.d_resolution_low 20.294 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3550 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.79 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.09 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6JEC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.049 _refine.ls_d_res_low 20.294 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3550 _refine.ls_number_reflns_R_free 196 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.79 _refine.ls_percent_reflns_R_free 5.52 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1806 _refine.ls_R_factor_R_free 0.2156 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1786 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.16 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.99 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.16 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 573 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 700 _refine_hist.d_res_high 2.049 _refine_hist.d_res_low 20.294 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 612 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.331 ? 850 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.629 ? 371 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.092 ? 81 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 118 ? f_plane_restr ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.049 _refine_ls_shell.d_res_low 2.09 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 196 _refine_ls_shell.number_reflns_R_work 3354 _refine_ls_shell.percent_reflns_obs 93.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2156 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1786 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6JEC _struct.title 'Structure of a triple-helix region of human collagen type II' _struct.pdbx_descriptor 'collagen type III peptide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JEC _struct_keywords.text 'collagen, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A ACE 1 C ? ? ? 1_555 A PRO 2 N ? ? A ACE 0 A PRO 1 1_555 ? ? ? ? ? ? ? 1.341 ? covale2 covale both ? A PRO 2 C ? ? ? 1_555 A HYP 3 N ? ? A PRO 1 A HYP 2 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale both ? A HYP 3 C ? ? ? 1_555 A GLY 4 N ? ? A HYP 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale both ? A PRO 5 C ? ? ? 1_555 A HYP 6 N ? ? A PRO 4 A HYP 5 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale both ? A HYP 6 C ? ? ? 1_555 A GLY 7 N ? ? A HYP 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale both ? A PRO 8 C ? ? ? 1_555 A HYP 9 N ? ? A PRO 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale both ? A HYP 9 C ? ? ? 1_555 A GLY 10 N ? ? A HYP 8 A GLY 9 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale both ? A PRO 23 C ? ? ? 1_555 A HYP 24 N ? ? A PRO 22 A HYP 23 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale both ? A HYP 24 C ? ? ? 1_555 A GLY 25 N ? ? A HYP 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale both ? A PRO 26 C ? ? ? 1_555 A HYP 27 N ? ? A PRO 25 A HYP 26 1_555 ? ? ? ? ? ? ? 1.326 ? covale11 covale both ? A HYP 27 C ? ? ? 1_555 A GLY 28 N ? ? A HYP 26 A GLY 27 1_555 ? ? ? ? ? ? ? 1.328 ? covale12 covale both ? A PRO 29 C ? ? ? 1_555 A HYP 30 N ? ? A PRO 28 A HYP 29 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale both ? B PRO 2 C ? ? ? 1_555 B HYP 3 N ? ? B PRO 1 B HYP 2 1_555 ? ? ? ? ? ? ? 1.330 ? covale14 covale both ? B HYP 3 C ? ? ? 1_555 B GLY 4 N ? ? B HYP 2 B GLY 3 1_555 ? ? ? ? ? ? ? 1.328 ? covale15 covale both ? B PRO 5 C ? ? ? 1_555 B HYP 6 N ? ? B PRO 4 B HYP 5 1_555 ? ? ? ? ? ? ? 1.328 ? covale16 covale both ? B HYP 6 C ? ? ? 1_555 B GLY 7 N ? ? B HYP 5 B GLY 6 1_555 ? ? ? ? ? ? ? 1.328 ? covale17 covale both ? B PRO 8 C ? ? ? 1_555 B HYP 9 N ? ? B PRO 7 B HYP 8 1_555 ? ? ? ? ? ? ? 1.329 ? covale18 covale both ? B HYP 9 C ? ? ? 1_555 B GLY 10 N ? ? B HYP 8 B GLY 9 1_555 ? ? ? ? ? ? ? 1.328 ? covale19 covale both ? B PRO 23 C ? ? ? 1_555 B HYP 24 N ? ? B PRO 22 B HYP 23 1_555 ? ? ? ? ? ? ? 1.326 ? covale20 covale both ? B HYP 24 C ? ? ? 1_555 B GLY 25 N ? ? B HYP 23 B GLY 24 1_555 ? ? ? ? ? ? ? 1.327 ? covale21 covale both ? B PRO 26 C ? ? ? 1_555 B HYP 27 N ? ? B PRO 25 B HYP 26 1_555 ? ? ? ? ? ? ? 1.326 ? covale22 covale both ? B HYP 27 C ? ? ? 1_555 B GLY 28 N ? ? B HYP 26 B GLY 27 1_555 ? ? ? ? ? ? ? 1.326 ? covale23 covale both ? B PRO 29 C ? ? ? 1_555 B HYP 30 N ? ? B PRO 28 B HYP 29 1_555 ? ? ? ? ? ? ? 1.326 ? covale24 covale both ? B HYP 30 C ? ? ? 1_555 B GLY 31 N ? ? B HYP 29 B GLY 30 1_555 ? ? ? ? ? ? ? 1.329 ? covale25 covale both ? C ACE 1 C ? ? ? 1_555 C PRO 2 N ? ? C ACE 0 C PRO 1 1_555 ? ? ? ? ? ? ? 1.336 ? covale26 covale both ? C PRO 2 C ? ? ? 1_555 C HYP 3 N ? ? C PRO 1 C HYP 2 1_555 ? ? ? ? ? ? ? 1.333 ? covale27 covale both ? C HYP 3 C ? ? ? 1_555 C GLY 4 N ? ? C HYP 2 C GLY 3 1_555 ? ? ? ? ? ? ? 1.328 ? covale28 covale both ? C PRO 5 C ? ? ? 1_555 C HYP 6 N ? ? C PRO 4 C HYP 5 1_555 ? ? ? ? ? ? ? 1.326 ? covale29 covale both ? C HYP 6 C ? ? ? 1_555 C GLY 7 N ? ? C HYP 5 C GLY 6 1_555 ? ? ? ? ? ? ? 1.329 ? covale30 covale both ? C PRO 8 C ? ? ? 1_555 C HYP 9 N ? ? C PRO 7 C HYP 8 1_555 ? ? ? ? ? ? ? 1.327 ? covale31 covale both ? C HYP 9 C ? ? ? 1_555 C GLY 10 N ? ? C HYP 8 C GLY 9 1_555 ? ? ? ? ? ? ? 1.327 ? covale32 covale both ? C PRO 23 C ? ? ? 1_555 C HYP 24 N ? ? C PRO 22 C HYP 23 1_555 ? ? ? ? ? ? ? 1.327 ? covale33 covale both ? C HYP 24 C ? ? ? 1_555 C GLY 25 N ? ? C HYP 23 C GLY 24 1_555 ? ? ? ? ? ? ? 1.327 ? covale34 covale both ? C PRO 26 C ? ? ? 1_555 C HYP 27 N ? ? C PRO 25 C HYP 26 1_555 ? ? ? ? ? ? ? 1.326 ? covale35 covale both ? C HYP 27 C ? ? ? 1_555 C GLY 28 N ? ? C HYP 26 C GLY 27 1_555 ? ? ? ? ? ? ? 1.327 ? covale36 covale both ? C PRO 29 C ? ? ? 1_555 C HYP 30 N ? ? C PRO 28 C HYP 29 1_555 ? ? ? ? ? ? ? 1.328 ? covale37 covale both ? C HYP 30 C ? ? ? 1_555 C GLY 31 N ? ? C HYP 29 C GLY 30 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6JEC _atom_sites.fract_transf_matrix[1][1] 0.051653 _atom_sites.fract_transf_matrix[1][2] 0.022962 _atom_sites.fract_transf_matrix[1][3] 0.008139 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.047601 _atom_sites.fract_transf_matrix[2][3] 0.012739 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025957 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 PRO 2 1 1 PRO PRO A . n A 1 3 HYP 3 2 2 HYP HYP A . n A 1 4 GLY 4 3 3 GLY GLY A . n A 1 5 PRO 5 4 4 PRO PRO A . n A 1 6 HYP 6 5 5 HYP HYP A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 HYP 9 8 8 HYP HYP A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 GLN 18 17 17 GLN GLN A . n A 1 19 GLY 19 18 18 GLY GLY A . n A 1 20 PRO 20 19 19 PRO PRO A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 GLY 22 21 21 GLY GLY A . n A 1 23 PRO 23 22 22 PRO PRO A . n A 1 24 HYP 24 23 23 HYP HYP A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 HYP 27 26 26 HYP HYP A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 HYP 30 29 29 HYP HYP A . n A 1 31 GLY 31 30 ? ? ? A . n B 1 1 ACE 1 0 ? ? ? B . n B 1 2 PRO 2 1 1 PRO PRO B . n B 1 3 HYP 3 2 2 HYP HYP B . n B 1 4 GLY 4 3 3 GLY GLY B . n B 1 5 PRO 5 4 4 PRO PRO B . n B 1 6 HYP 6 5 5 HYP HYP B . n B 1 7 GLY 7 6 6 GLY GLY B . n B 1 8 PRO 8 7 7 PRO PRO B . n B 1 9 HYP 9 8 8 HYP HYP B . n B 1 10 GLY 10 9 9 GLY GLY B . n B 1 11 ARG 11 10 10 ARG ARG B . n B 1 12 ALA 12 11 11 ALA ALA B . n B 1 13 GLY 13 12 12 GLY GLY B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 PRO 15 14 14 PRO PRO B . n B 1 16 GLY 16 15 15 GLY GLY B . n B 1 17 LEU 17 16 16 LEU LEU B . n B 1 18 GLN 18 17 17 GLN GLN B . n B 1 19 GLY 19 18 18 GLY GLY B . n B 1 20 PRO 20 19 19 PRO PRO B . n B 1 21 ALA 21 20 20 ALA ALA B . n B 1 22 GLY 22 21 21 GLY GLY B . n B 1 23 PRO 23 22 22 PRO PRO B . n B 1 24 HYP 24 23 23 HYP HYP B . n B 1 25 GLY 25 24 24 GLY GLY B . n B 1 26 PRO 26 25 25 PRO PRO B . n B 1 27 HYP 27 26 26 HYP HYP B . n B 1 28 GLY 28 27 27 GLY GLY B . n B 1 29 PRO 29 28 28 PRO PRO B . n B 1 30 HYP 30 29 29 HYP HYP B . n B 1 31 GLY 31 30 30 GLY GLY B . n C 1 1 ACE 1 0 0 ACE ACE C . n C 1 2 PRO 2 1 1 PRO PRO C . n C 1 3 HYP 3 2 2 HYP HYP C . n C 1 4 GLY 4 3 3 GLY GLY C . n C 1 5 PRO 5 4 4 PRO PRO C . n C 1 6 HYP 6 5 5 HYP HYP C . n C 1 7 GLY 7 6 6 GLY GLY C . n C 1 8 PRO 8 7 7 PRO PRO C . n C 1 9 HYP 9 8 8 HYP HYP C . n C 1 10 GLY 10 9 9 GLY GLY C . n C 1 11 ARG 11 10 10 ARG ARG C . n C 1 12 ALA 12 11 11 ALA ALA C . n C 1 13 GLY 13 12 12 GLY GLY C . n C 1 14 GLU 14 13 13 GLU GLU C . n C 1 15 PRO 15 14 14 PRO PRO C . n C 1 16 GLY 16 15 15 GLY GLY C . n C 1 17 LEU 17 16 16 LEU LEU C . n C 1 18 GLN 18 17 17 GLN GLN C . n C 1 19 GLY 19 18 18 GLY GLY C . n C 1 20 PRO 20 19 19 PRO PRO C . n C 1 21 ALA 21 20 20 ALA ALA C . n C 1 22 GLY 22 21 21 GLY GLY C . n C 1 23 PRO 23 22 22 PRO PRO C . n C 1 24 HYP 24 23 23 HYP HYP C . n C 1 25 GLY 25 24 24 GLY GLY C . n C 1 26 PRO 26 25 25 PRO PRO C . n C 1 27 HYP 27 26 26 HYP HYP C . n C 1 28 GLY 28 27 27 GLY GLY C . n C 1 29 PRO 29 28 28 PRO PRO C . n C 1 30 HYP 30 29 29 HYP HYP C . n C 1 31 GLY 31 30 30 GLY GLY C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 101 75 HOH HOH A . D 2 HOH 2 102 107 HOH HOH A . D 2 HOH 3 103 37 HOH HOH A . D 2 HOH 4 104 64 HOH HOH A . D 2 HOH 5 105 14 HOH HOH A . D 2 HOH 6 106 56 HOH HOH A . D 2 HOH 7 107 39 HOH HOH A . D 2 HOH 8 108 19 HOH HOH A . D 2 HOH 9 109 93 HOH HOH A . D 2 HOH 10 110 42 HOH HOH A . D 2 HOH 11 111 20 HOH HOH A . D 2 HOH 12 112 1 HOH HOH A . D 2 HOH 13 113 8 HOH HOH A . D 2 HOH 14 114 53 HOH HOH A . D 2 HOH 15 115 3 HOH HOH A . D 2 HOH 16 116 50 HOH HOH A . D 2 HOH 17 117 123 HOH HOH A . D 2 HOH 18 118 92 HOH HOH A . D 2 HOH 19 119 94 HOH HOH A . D 2 HOH 20 120 95 HOH HOH A . D 2 HOH 21 121 97 HOH HOH A . D 2 HOH 22 122 23 HOH HOH A . D 2 HOH 23 123 67 HOH HOH A . D 2 HOH 24 124 106 HOH HOH A . D 2 HOH 25 125 26 HOH HOH A . D 2 HOH 26 126 115 HOH HOH A . D 2 HOH 27 127 48 HOH HOH A . D 2 HOH 28 128 85 HOH HOH A . D 2 HOH 29 129 101 HOH HOH A . D 2 HOH 30 130 47 HOH HOH A . D 2 HOH 31 131 18 HOH HOH A . D 2 HOH 32 132 24 HOH HOH A . D 2 HOH 33 133 10 HOH HOH A . D 2 HOH 34 134 21 HOH HOH A . D 2 HOH 35 135 68 HOH HOH A . D 2 HOH 36 136 52 HOH HOH A . D 2 HOH 37 137 87 HOH HOH A . D 2 HOH 38 138 36 HOH HOH A . D 2 HOH 39 139 98 HOH HOH A . D 2 HOH 40 140 70 HOH HOH A . D 2 HOH 41 141 69 HOH HOH A . D 2 HOH 42 142 127 HOH HOH A . D 2 HOH 43 143 81 HOH HOH A . E 2 HOH 1 101 57 HOH HOH B . E 2 HOH 2 102 27 HOH HOH B . E 2 HOH 3 103 110 HOH HOH B . E 2 HOH 4 104 5 HOH HOH B . E 2 HOH 5 105 55 HOH HOH B . E 2 HOH 6 106 126 HOH HOH B . E 2 HOH 7 107 60 HOH HOH B . E 2 HOH 8 108 77 HOH HOH B . E 2 HOH 9 109 120 HOH HOH B . E 2 HOH 10 110 108 HOH HOH B . E 2 HOH 11 111 72 HOH HOH B . E 2 HOH 12 112 4 HOH HOH B . E 2 HOH 13 113 104 HOH HOH B . E 2 HOH 14 114 79 HOH HOH B . E 2 HOH 15 115 54 HOH HOH B . E 2 HOH 16 116 44 HOH HOH B . E 2 HOH 17 117 116 HOH HOH B . E 2 HOH 18 118 96 HOH HOH B . E 2 HOH 19 119 34 HOH HOH B . E 2 HOH 20 120 35 HOH HOH B . E 2 HOH 21 121 114 HOH HOH B . E 2 HOH 22 122 46 HOH HOH B . E 2 HOH 23 123 6 HOH HOH B . E 2 HOH 24 124 109 HOH HOH B . E 2 HOH 25 125 12 HOH HOH B . E 2 HOH 26 126 99 HOH HOH B . E 2 HOH 27 127 80 HOH HOH B . E 2 HOH 28 128 73 HOH HOH B . E 2 HOH 29 129 118 HOH HOH B . E 2 HOH 30 130 113 HOH HOH B . E 2 HOH 31 131 124 HOH HOH B . E 2 HOH 32 132 76 HOH HOH B . E 2 HOH 33 133 43 HOH HOH B . E 2 HOH 34 134 121 HOH HOH B . E 2 HOH 35 135 15 HOH HOH B . E 2 HOH 36 136 88 HOH HOH B . E 2 HOH 37 137 86 HOH HOH B . E 2 HOH 38 138 105 HOH HOH B . F 2 HOH 1 101 29 HOH HOH C . F 2 HOH 2 102 25 HOH HOH C . F 2 HOH 3 103 125 HOH HOH C . F 2 HOH 4 104 78 HOH HOH C . F 2 HOH 5 105 82 HOH HOH C . F 2 HOH 6 106 71 HOH HOH C . F 2 HOH 7 107 49 HOH HOH C . F 2 HOH 8 108 38 HOH HOH C . F 2 HOH 9 109 66 HOH HOH C . F 2 HOH 10 110 7 HOH HOH C . F 2 HOH 11 111 51 HOH HOH C . F 2 HOH 12 112 16 HOH HOH C . F 2 HOH 13 113 22 HOH HOH C . F 2 HOH 14 114 17 HOH HOH C . F 2 HOH 15 115 62 HOH HOH C . F 2 HOH 16 116 9 HOH HOH C . F 2 HOH 17 117 90 HOH HOH C . F 2 HOH 18 118 45 HOH HOH C . F 2 HOH 19 119 30 HOH HOH C . F 2 HOH 20 120 28 HOH HOH C . F 2 HOH 21 121 74 HOH HOH C . F 2 HOH 22 122 2 HOH HOH C . F 2 HOH 23 123 103 HOH HOH C . F 2 HOH 24 124 32 HOH HOH C . F 2 HOH 25 125 11 HOH HOH C . F 2 HOH 26 126 84 HOH HOH C . F 2 HOH 27 127 33 HOH HOH C . F 2 HOH 28 128 61 HOH HOH C . F 2 HOH 29 129 122 HOH HOH C . F 2 HOH 30 130 89 HOH HOH C . F 2 HOH 31 131 112 HOH HOH C . F 2 HOH 32 132 102 HOH HOH C . F 2 HOH 33 133 13 HOH HOH C . F 2 HOH 34 134 83 HOH HOH C . F 2 HOH 35 135 59 HOH HOH C . F 2 HOH 36 136 65 HOH HOH C . F 2 HOH 37 137 91 HOH HOH C . F 2 HOH 38 138 40 HOH HOH C . F 2 HOH 39 139 117 HOH HOH C . F 2 HOH 40 140 100 HOH HOH C . F 2 HOH 41 141 63 HOH HOH C . F 2 HOH 42 142 119 HOH HOH C . F 2 HOH 43 143 58 HOH HOH C . F 2 HOH 44 144 31 HOH HOH C . F 2 HOH 45 145 111 HOH HOH C . F 2 HOH 46 146 41 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5320 ? 1 MORE -29 ? 1 'SSA (A^2)' 5530 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 3.5897 37.1673 5.4479 -0.0391 0.0649 0.1189 0.0213 -0.0728 0.0189 0.0047 0.2740 0.4766 0.0224 -0.0284 -0.3239 0.0091 0.0021 -0.0816 0.0785 0.0655 -0.0949 0.0706 0.0789 0.3770 'X-RAY DIFFRACTION' 2 ? refined 0.3670 59.1120 -8.6152 0.0422 0.0448 0.0618 0.0008 -0.0116 -0.0075 1.0008 3.3179 0.5270 0.4285 -0.2974 -0.7226 0.0527 0.0471 0.0859 0.0074 0.0153 0.0800 -0.0211 -0.0983 0.0382 'X-RAY DIFFRACTION' 3 ? refined 0.6321 73.8975 -9.0802 0.0689 0.0077 0.1238 0.0140 0.0619 -0.0079 0.6435 0.2463 0.6319 -0.3059 0.1986 0.0236 -0.0126 0.0411 -0.0836 -0.0262 0.0271 0.0332 0.1369 0.0082 0.0002 'X-RAY DIFFRACTION' 4 ? refined 5.4136 89.1483 -15.0400 0.1215 0.0658 0.0508 -0.0274 0.0039 -0.0006 0.5294 1.1804 0.9685 0.0381 -0.1070 0.4159 0.0561 -0.0073 0.0003 -0.0019 0.0673 -0.0970 -0.0781 0.1307 0.1423 'X-RAY DIFFRACTION' 5 ? refined 0.8643 34.7183 7.8362 0.0891 0.0761 0.1217 0.0122 -0.0484 -0.0131 0.4442 3.0309 1.2011 0.4510 -0.3861 -1.3012 0.1200 -0.0438 -0.0102 0.1815 0.0061 -0.0227 -0.1499 0.0324 0.0554 'X-RAY DIFFRACTION' 6 ? refined 4.3226 64.5850 -8.3335 0.1205 0.0772 0.0539 0.0050 0.0229 0.0139 0.3939 0.4857 0.0916 -0.2889 0.0722 0.0941 -0.0177 0.0751 -0.0214 -0.0430 0.0500 0.0020 -0.0718 0.0404 0.0380 'X-RAY DIFFRACTION' 7 ? refined 0.5784 86.5631 -17.3082 0.0622 -0.0176 0.0370 -0.0932 -0.0230 -0.1655 2.0359 0.3100 1.5952 0.0130 0.0664 -0.4106 -0.0197 0.0957 0.2432 -0.0415 0.0505 0.0008 -0.0990 0.0682 0.0180 'X-RAY DIFFRACTION' 8 ? refined 4.3302 26.0054 9.2487 0.1975 0.2834 0.1148 -0.0062 0.0344 0.0721 1.0073 5.0963 3.6962 -1.0779 1.0676 -3.6983 -0.0256 -0.0944 -0.0991 0.1017 -0.0894 -0.0674 0.1684 0.2638 0.0774 'X-RAY DIFFRACTION' 9 ? refined -0.9494 41.6034 1.3952 0.1256 0.0561 0.0232 -0.0884 0.1695 0.0764 0.0573 1.7444 0.4267 0.1080 -0.1136 -0.7788 0.0216 -0.1264 -0.0019 0.0564 0.0135 0.0950 0.0013 -0.0994 -0.0209 'X-RAY DIFFRACTION' 10 ? refined -0.0788 58.7299 -1.6532 0.1902 0.1642 -0.0144 0.0846 -0.0072 0.0006 0.8065 3.0608 1.4588 0.6105 0.0206 0.0828 0.0494 -0.0673 -0.0124 0.0948 -0.0003 -0.0151 -0.0162 -0.1880 0.0124 'X-RAY DIFFRACTION' 11 ? refined 5.3331 80.9056 -14.6474 0.0558 0.0521 0.0780 -0.0021 -0.0396 -0.0148 0.2632 0.9506 0.5799 -0.2090 0.1697 0.1551 -0.0110 0.0224 -0.0695 -0.0848 0.1043 -0.1206 -0.1915 0.0817 0.0617 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 0 through 12 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 13 through 17 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 18 through 22 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 24 through 28 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 13 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 14 through 24 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 25 through 30 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 0 through 6 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 7 through 12 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 13 through 17 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 18 through 30 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 22 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 101 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.98 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 142 ? ? 1_555 O B HOH 132 ? ? 1_545 1.87 2 1 O A HOH 138 ? ? 1_555 O A HOH 143 ? ? 1_435 2.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 30 ? A GLY 31 2 1 Y 1 B ACE 0 ? B ACE 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #