HEADER HYDROLASE 07-FEB-19 6JET TITLE ACTINONIN BOUND CRYSTAL STRUCTURE OF CLASS I TYPE A PEPTIDE TITLE 2 DEFORMYLASE FROM ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE DEFORMYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PDF,POLYPEPTIDE DEFORMYLASE; COMPND 5 EC: 3.5.1.88; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII MRSN 3527; SOURCE 3 ORGANISM_TAXID: 1409923; SOURCE 4 GENE: DEF_1, DEF, T630_0214; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS PEPTIDE DEFORMYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.H.HO,I.H.LEE,L.W.KANG REVDAT 2 22-NOV-23 6JET 1 LINK REVDAT 1 12-FEB-20 6JET 0 JRNL AUTH T.H.HO,I.H.LEE,L.W.KANG JRNL TITL ACTINONIN BOUND CRYSTAL STRUCTURE OF CLASS I TYPE A PEPTIDE JRNL TITL 2 DEFORMYLASE FROM ACINETOBACTER BAUMANNII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 646 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 899 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 33 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2539 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.887 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.367 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.322 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.834 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.866 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.832 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2639 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2493 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3596 ; 1.696 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5755 ; 1.053 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 7.601 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;38.838 ;24.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 411 ;18.822 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.946 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 436 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2913 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 473 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6JET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300010985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16034 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6JER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.03 M MGCL2, 0.03 M CACL2, 15% (V/V) REMARK 280 PEGMME, 15% (W/V) PEG 20000, 0.1 M TRIS (BASE)/ BICINE PH 8.5, REMARK 280 EVAPORATION, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.45150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 172 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 GLN A 30 CG CD OE1 NE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 SER A 66 OG REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 GLN A 86 CG CD OE1 NE2 REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 154 CG CD OE1 NE2 REMARK 470 ARG A 155 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 ARG A 165 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 167 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 GLN B 30 CG CD OE1 NE2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 SER B 66 OG REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 GLU B 83 CG CD OE1 OE2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 GLN B 86 CG CD OE1 NE2 REMARK 470 GLN B 97 CG CD OE1 NE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 ARG B 107 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 154 CG CD OE1 NE2 REMARK 470 ARG B 155 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 GLU B 161 CG CD OE1 OE2 REMARK 470 ARG B 165 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 169 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 470 LYS B 171 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 27 O HOH A 301 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 151 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 69 60.80 -117.58 REMARK 500 ASN A 75 57.43 36.64 REMARK 500 GLU A 84 76.41 -157.42 REMARK 500 TYR A 88 115.06 -161.34 REMARK 500 GLN A 97 6.71 56.02 REMARK 500 GLU A 121 91.64 -162.80 REMARK 500 PRO B 10 49.36 -109.32 REMARK 500 HIS B 55 66.96 -105.74 REMARK 500 ASP B 68 31.42 -152.78 REMARK 500 ALA B 112 -168.85 -172.01 REMARK 500 ARG B 169 -4.12 -56.87 REMARK 500 LYS B 171 -160.90 -128.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 92 SG REMARK 620 2 HIS A 134 NE2 119.1 REMARK 620 3 HIS A 138 NE2 109.1 93.2 REMARK 620 4 BB2 A 202 O4 87.4 102.6 148.0 REMARK 620 5 BB2 A 202 O2 149.1 88.1 81.6 71.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 92 SG REMARK 620 2 HIS B 134 NE2 123.0 REMARK 620 3 HIS B 138 NE2 108.9 86.9 REMARK 620 4 BB2 B 202 O2 151.8 84.9 73.2 REMARK 620 5 BB2 B 202 O4 97.6 93.7 147.9 74.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BB2 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BB2 B 202 DBREF1 6JET A 2 172 UNP A0A0J1A8B1_ACIBA DBREF2 6JET A A0A0J1A8B1 2 172 DBREF1 6JET B 2 172 UNP A0A0J1A8B1_ACIBA DBREF2 6JET B A0A0J1A8B1 2 172 SEQRES 1 A 171 ALA LEU LEU PRO ILE LEU SER PHE PRO ASP PRO ARG LEU SEQRES 2 A 171 ARG THR ILE ALA LYS PRO VAL GLU GLU VAL THR ASP GLU SEQRES 3 A 171 ILE ARG GLN LEU ALA ALA ASP MET PHE GLU THR MET TYR SEQRES 4 A 171 ALA ALA PRO GLY ILE GLY LEU ALA ALA SER GLN VAL ASP SEQRES 5 A 171 ARG HIS ILE GLN LEU ILE VAL MET ASP LEU SER GLU SER SEQRES 6 A 171 LYS ASP GLU PRO MET VAL PHE ILE ASN PRO LYS VAL THR SEQRES 7 A 171 PRO LEU THR GLU GLU THR GLN PRO TYR GLU GLU GLY CYS SEQRES 8 A 171 LEU SER VAL PRO GLN ILE TYR ASP LYS VAL ASP ARG PRO SEQRES 9 A 171 SER ARG VAL LYS ILE GLU ALA ILE ASN LEU GLU GLY GLN SEQRES 10 A 171 ALA PHE GLU ILE GLU ALA ASP GLY LEU LEU ALA VAL CYS SEQRES 11 A 171 ILE GLN HIS GLU MET ASP HIS LEU ASN GLY LYS LEU PHE SEQRES 12 A 171 VAL ASP TYR LEU SER PRO LEU LYS ARG GLN ARG ALA ARG SEQRES 13 A 171 GLU LYS VAL GLU LYS ILE VAL ARG GLN ARG GLU ARG GLU SEQRES 14 A 171 LYS VAL SEQRES 1 B 171 ALA LEU LEU PRO ILE LEU SER PHE PRO ASP PRO ARG LEU SEQRES 2 B 171 ARG THR ILE ALA LYS PRO VAL GLU GLU VAL THR ASP GLU SEQRES 3 B 171 ILE ARG GLN LEU ALA ALA ASP MET PHE GLU THR MET TYR SEQRES 4 B 171 ALA ALA PRO GLY ILE GLY LEU ALA ALA SER GLN VAL ASP SEQRES 5 B 171 ARG HIS ILE GLN LEU ILE VAL MET ASP LEU SER GLU SER SEQRES 6 B 171 LYS ASP GLU PRO MET VAL PHE ILE ASN PRO LYS VAL THR SEQRES 7 B 171 PRO LEU THR GLU GLU THR GLN PRO TYR GLU GLU GLY CYS SEQRES 8 B 171 LEU SER VAL PRO GLN ILE TYR ASP LYS VAL ASP ARG PRO SEQRES 9 B 171 SER ARG VAL LYS ILE GLU ALA ILE ASN LEU GLU GLY GLN SEQRES 10 B 171 ALA PHE GLU ILE GLU ALA ASP GLY LEU LEU ALA VAL CYS SEQRES 11 B 171 ILE GLN HIS GLU MET ASP HIS LEU ASN GLY LYS LEU PHE SEQRES 12 B 171 VAL ASP TYR LEU SER PRO LEU LYS ARG GLN ARG ALA ARG SEQRES 13 B 171 GLU LYS VAL GLU LYS ILE VAL ARG GLN ARG GLU ARG GLU SEQRES 14 B 171 LYS VAL HET ZN A 201 1 HET BB2 A 202 27 HET ZN B 201 1 HET BB2 B 202 27 HETNAM ZN ZINC ION HETNAM BB2 ACTINONIN HETSYN BB2 2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEPTANOIC ACID [1-(2- HETSYN 2 BB2 HYDROXYMETHYL-PYRROLIDINE-1-CARBONYL)-2-METHYL- HETSYN 3 BB2 PROPYL]-AMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 BB2 2(C19 H35 N3 O5) FORMUL 7 HOH *56(H2 O) HELIX 1 AA1 ASP A 11 THR A 16 5 6 HELIX 2 AA2 THR A 25 ALA A 42 1 18 HELIX 3 AA3 SER A 50 ASP A 53 5 4 HELIX 4 AA4 ASP A 125 ASN A 140 1 16 HELIX 5 AA5 LEU A 143 LEU A 148 5 6 HELIX 6 AA6 SER A 149 LYS A 171 1 23 HELIX 7 AA7 ASP B 11 THR B 16 5 6 HELIX 8 AA8 THR B 25 ALA B 42 1 18 HELIX 9 AA9 SER B 50 ASP B 53 5 4 HELIX 10 AB1 ASP B 125 ASN B 140 1 16 HELIX 11 AB2 LEU B 143 LEU B 148 5 6 HELIX 12 AB3 SER B 149 ARG B 169 1 21 SHEET 1 AA1 5 GLY A 46 ALA A 48 0 SHEET 2 AA1 5 LEU A 58 ASP A 62 -1 O VAL A 60 N LEU A 47 SHEET 3 AA1 5 PRO A 70 PRO A 80 -1 O PHE A 73 N ILE A 59 SHEET 4 AA1 5 VAL A 108 ILE A 113 -1 O GLU A 111 N LYS A 77 SHEET 5 AA1 5 ALA A 119 ALA A 124 -1 O ALA A 124 N VAL A 108 SHEET 1 AA2 2 THR A 85 CYS A 92 0 SHEET 2 AA2 2 VAL A 95 PRO A 105 -1 O ASP A 100 N GLU A 90 SHEET 1 AA3 5 GLY B 46 ALA B 48 0 SHEET 2 AA3 5 LEU B 58 MET B 61 -1 O VAL B 60 N LEU B 47 SHEET 3 AA3 5 MET B 71 PRO B 80 -1 O MET B 71 N MET B 61 SHEET 4 AA3 5 VAL B 108 ILE B 113 -1 O GLU B 111 N LYS B 77 SHEET 5 AA3 5 ALA B 119 ALA B 124 -1 O ILE B 122 N ILE B 110 SHEET 1 AA4 2 THR B 85 CYS B 92 0 SHEET 2 AA4 2 VAL B 95 PRO B 105 -1 O ASP B 100 N GLU B 90 LINK SG CYS A 92 ZN ZN A 201 1555 1555 2.33 LINK NE2 HIS A 134 ZN ZN A 201 1555 1555 2.31 LINK NE2 HIS A 138 ZN ZN A 201 1555 1555 1.97 LINK ZN ZN A 201 O4 BB2 A 202 1555 1555 2.55 LINK ZN ZN A 201 O2 BB2 A 202 1555 1555 1.88 LINK SG CYS B 92 ZN ZN B 201 1555 1555 2.39 LINK NE2 HIS B 134 ZN ZN B 201 1555 1555 2.15 LINK NE2 HIS B 138 ZN ZN B 201 1555 1555 2.16 LINK ZN ZN B 201 O2 BB2 B 202 1555 1555 2.28 LINK ZN ZN B 201 O4 BB2 B 202 1555 1555 1.95 CISPEP 1 PHE A 9 PRO A 10 0 16.93 CISPEP 2 ALA A 42 PRO A 43 0 -9.81 CISPEP 3 PHE B 9 PRO B 10 0 0.94 CISPEP 4 ALA B 42 PRO B 43 0 -8.36 SITE 1 AC1 6 GLN A 51 CYS A 92 HIS A 134 HIS A 138 SITE 2 AC1 6 BB2 A 202 HOH A 318 SITE 1 AC2 14 GLY A 44 ILE A 45 GLY A 46 GLN A 51 SITE 2 AC2 14 GLU A 89 GLY A 91 CYS A 92 LEU A 93 SITE 3 AC2 14 TYR A 99 VAL A 130 HIS A 134 GLU A 135 SITE 4 AC2 14 HIS A 138 ZN A 201 SITE 1 AC3 5 GLN B 51 CYS B 92 HIS B 134 HIS B 138 SITE 2 AC3 5 BB2 B 202 SITE 1 AC4 14 GLN A 118 GLY B 44 ILE B 45 GLY B 46 SITE 2 AC4 14 GLN B 51 GLY B 91 CYS B 92 LEU B 93 SITE 3 AC4 14 TYR B 99 VAL B 130 HIS B 134 GLU B 135 SITE 4 AC4 14 HIS B 138 ZN B 201 CRYST1 43.666 112.903 43.678 90.00 102.85 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022901 0.000000 0.005223 0.00000 SCALE2 0.000000 0.008857 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023483 0.00000