HEADER TRANSCRIPTION/DNA 15-FEB-19 6JGX TITLE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA TITLE 2 IN COMPLEX WITH CADMIUM(II) AND DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CD(II)/PB(II)-RESPONSIVE TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(*CP*AP*CP*CP*CP*TP*AP*TP*AP*GP*TP*GP*GP*CP*TP*AP*CP*AP*GP*GP*GP*T)- COMPND 9 3'); COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*GP*AP*CP*CP*CP*TP*GP*TP*AP*GP*CP*CP*AP*CP*TP*AP*TP*AP*GP*GP*GP*T)- COMPND 15 3'); COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_COMMON: ARTHROBACTER SIDEROCAPSULATUS; SOURCE 4 ORGANISM_TAXID: 303; SOURCE 5 ATCC: 47054; SOURCE 6 GENE: CADR, BIW19_10095, BL240_26950; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 12 ORGANISM_TAXID: 303; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 16 ORGANISM_TAXID: 303 KEYWDS CADR, MERR FAMILY, CADMIUM REGULATOR, TRANSCRIPTION, TRANSCRIPTION- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.C.LIU,J.H.GAN,H.CHEN REVDAT 4 22-NOV-23 6JGX 1 LINK REVDAT 3 23-OCT-19 6JGX 1 JRNL REVDAT 2 09-OCT-19 6JGX 1 JRNL REVDAT 1 25-SEP-19 6JGX 0 JRNL AUTH X.LIU,Q.HU,J.YANG,S.HUANG,T.WEI,W.CHEN,Y.HE,D.WANG,Z.LIU, JRNL AUTH 2 K.WANG,J.GAN,H.CHEN JRNL TITL SELECTIVE CADMIUM REGULATION MEDIATED BY A COOPERATIVE JRNL TITL 2 BINDING MECHANISM IN CADR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 20398 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31548408 JRNL DOI 10.1073/PNAS.1908610116 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 21613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1128 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1491 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.3990 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2200 REMARK 3 NUCLEIC ACID ATOMS : 896 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.08000 REMARK 3 B22 (A**2) : -2.08000 REMARK 3 B33 (A**2) : 6.74000 REMARK 3 B12 (A**2) : -1.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.335 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.244 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.221 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.518 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3227 ; 0.008 ; 0.017 REMARK 3 BOND LENGTHS OTHERS (A): 2643 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4550 ; 1.359 ; 1.700 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6084 ; 1.172 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ; 5.924 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;41.475 ;23.504 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 402 ;18.026 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;16.620 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 481 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3069 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 730 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1113 ; 6.042 ; 8.762 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1112 ; 6.030 ; 8.759 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1386 ; 9.484 ;13.124 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1387 ; 9.484 ;13.128 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2114 ; 6.574 ; 8.528 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2113 ; 6.570 ; 8.529 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3165 ;10.202 ;12.703 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3903 ;13.664 ;69.132 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3902 ;13.662 ;69.129 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 135 B 1 135 15860 0.04 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6JGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300011101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22742 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 26.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JGV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, POTASSIUM CHLORIDE, REMARK 280 MAGNESIUM CHLORIDE, SODIUM CACODYLATE, PH 7.3, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.55900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.55900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.55900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 137 REMARK 465 HIS A 138 REMARK 465 GLY A 146 REMARK 465 HIS A 147 REMARK 465 GLU B 137 REMARK 465 HIS B 138 REMARK 465 SER B 139 REMARK 465 HIS B 140 REMARK 465 VAL B 141 REMARK 465 GLY B 142 REMARK 465 ARG B 143 REMARK 465 SER B 144 REMARK 465 HIS B 145 REMARK 465 GLY B 146 REMARK 465 HIS B 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 GLU B 135 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC C 3 C1' - O4' - C4' ANGL. DEV. = -6.6 DEGREES REMARK 500 DC D 3 C1' - O4' - C4' ANGL. DEV. = -6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 57 34.11 76.54 REMARK 500 ARG A 111 42.22 -89.04 REMARK 500 ARG A 143 -153.38 -96.11 REMARK 500 SER A 144 174.78 -58.49 REMARK 500 ASP B 57 34.20 76.38 REMARK 500 ARG B 111 42.27 -90.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE1 REMARK 620 2 GLU A 62 OE2 55.9 REMARK 620 3 HIS A 87 ND1 107.1 99.6 REMARK 620 4 HIS A 90 ND1 78.8 130.7 112.7 REMARK 620 5 HIS A 140 NE2 139.5 100.4 109.1 102.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1001 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 77 SG REMARK 620 2 ASN A 81 OD1 113.7 REMARK 620 3 CYS B 112 SG 109.5 91.9 REMARK 620 4 CYS B 119 SG 107.6 110.5 123.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 112 SG REMARK 620 2 CYS A 119 SG 125.1 REMARK 620 3 CYS B 77 SG 108.7 107.2 REMARK 620 4 ASN B 81 OD1 94.0 110.5 110.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 202 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 NE2 REMARK 620 2 GLU B 62 OE1 135.2 REMARK 620 3 GLU B 62 OE2 98.6 55.8 REMARK 620 4 HIS B 87 ND1 112.9 107.4 98.9 REMARK 620 5 HIS B 90 ND1 102.3 78.3 130.4 113.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD B 202 DBREF 6JGX A 1 147 UNP Q93TP7 Q93TP7_PSEPU 1 147 DBREF 6JGX B 1 147 UNP Q93TP7 Q93TP7_PSEPU 1 147 DBREF 6JGX C 1 22 PDB 6JGX 6JGX 1 22 DBREF 6JGX D 1 22 PDB 6JGX 6JGX 1 22 SEQRES 1 A 147 MET LYS ILE GLY GLU LEU ALA LYS ALA THR ASP CYS ALA SEQRES 2 A 147 VAL GLU THR ILE ARG TYR TYR GLU ARG GLU GLN LEU LEU SEQRES 3 A 147 PRO GLU PRO ALA ARG SER ASP GLY ASN TYR ARG LEU TYR SEQRES 4 A 147 THR GLN ALA HIS VAL GLU ARG LEU THR PHE ILE ARG ASN SEQRES 5 A 147 CYS ARG THR LEU ASP MET THR LEU ASP GLU ILE ARG SER SEQRES 6 A 147 LEU LEU ARG LEU ARG ASP SER PRO ASP ASP SER CYS GLY SEQRES 7 A 147 SER VAL ASN ALA LEU ILE ASP GLU HIS ILE GLU HIS VAL SEQRES 8 A 147 GLN ALA ARG ILE ASP GLY LEU VAL ALA LEU GLN GLU GLN SEQRES 9 A 147 LEU VAL GLU LEU ARG ARG ARG CYS ASN ALA GLN GLY ALA SEQRES 10 A 147 GLU CYS ALA ILE LEU GLN GLN LEU GLU THR ASN GLY ALA SEQRES 11 A 147 VAL SER VAL PRO GLU THR GLU HIS SER HIS VAL GLY ARG SEQRES 12 A 147 SER HIS GLY HIS SEQRES 1 B 147 MET LYS ILE GLY GLU LEU ALA LYS ALA THR ASP CYS ALA SEQRES 2 B 147 VAL GLU THR ILE ARG TYR TYR GLU ARG GLU GLN LEU LEU SEQRES 3 B 147 PRO GLU PRO ALA ARG SER ASP GLY ASN TYR ARG LEU TYR SEQRES 4 B 147 THR GLN ALA HIS VAL GLU ARG LEU THR PHE ILE ARG ASN SEQRES 5 B 147 CYS ARG THR LEU ASP MET THR LEU ASP GLU ILE ARG SER SEQRES 6 B 147 LEU LEU ARG LEU ARG ASP SER PRO ASP ASP SER CYS GLY SEQRES 7 B 147 SER VAL ASN ALA LEU ILE ASP GLU HIS ILE GLU HIS VAL SEQRES 8 B 147 GLN ALA ARG ILE ASP GLY LEU VAL ALA LEU GLN GLU GLN SEQRES 9 B 147 LEU VAL GLU LEU ARG ARG ARG CYS ASN ALA GLN GLY ALA SEQRES 10 B 147 GLU CYS ALA ILE LEU GLN GLN LEU GLU THR ASN GLY ALA SEQRES 11 B 147 VAL SER VAL PRO GLU THR GLU HIS SER HIS VAL GLY ARG SEQRES 12 B 147 SER HIS GLY HIS SEQRES 1 C 22 DC DA DC DC DC DT DA DT DA DG DT DG DG SEQRES 2 C 22 DC DT DA DC DA DG DG DG DT SEQRES 1 D 22 DG DA DC DC DC DT DG DT DA DG DC DC DA SEQRES 2 D 22 DC DT DA DT DA DG DG DG DT HET CD A1001 1 HET CD A1002 1 HET CD B 201 1 HET CD B 202 1 HETNAM CD CADMIUM ION FORMUL 5 CD 4(CD 2+) HELIX 1 AA1 LYS A 2 ASP A 11 1 10 HELIX 2 AA2 ALA A 13 GLU A 23 1 11 HELIX 3 AA3 THR A 40 LEU A 56 1 17 HELIX 4 AA4 THR A 59 ASP A 71 1 13 HELIX 5 AA5 SER A 76 ARG A 110 1 35 HELIX 6 AA6 CYS A 119 THR A 127 1 9 HELIX 7 AA7 LYS B 2 ASP B 11 1 10 HELIX 8 AA8 ALA B 13 GLU B 23 1 11 HELIX 9 AA9 THR B 40 LEU B 56 1 17 HELIX 10 AB1 THR B 59 ASP B 71 1 13 HELIX 11 AB2 SER B 76 ARG B 110 1 35 HELIX 12 AB3 CYS B 119 THR B 127 1 9 SHEET 1 AA1 2 ALA A 30 ARG A 31 0 SHEET 2 AA1 2 ARG A 37 LEU A 38 -1 O LEU A 38 N ALA A 30 SHEET 1 AA2 2 ALA B 30 ARG B 31 0 SHEET 2 AA2 2 ARG B 37 LEU B 38 -1 O LEU B 38 N ALA B 30 LINK OE1 GLU A 62 CD CD A1002 1555 1555 2.23 LINK OE2 GLU A 62 CD CD A1002 1555 1555 2.35 LINK SG CYS A 77 CD CD A1001 1555 1555 2.53 LINK OD1 ASN A 81 CD CD A1001 1555 1555 2.33 LINK ND1 HIS A 87 CD CD A1002 1555 1555 2.28 LINK ND1 HIS A 90 CD CD A1002 1555 1555 2.47 LINK SG CYS A 112 CD CD B 201 1555 1555 2.40 LINK SG CYS A 119 CD CD B 201 1555 1555 2.49 LINK NE2 HIS A 140 CD CD A1002 1555 1555 2.22 LINK NE2 HIS A 145 CD CD B 202 1555 1555 2.32 LINK CD CD A1001 SG CYS B 112 1555 1555 2.42 LINK CD CD A1001 SG CYS B 119 1555 1555 2.51 LINK OE1 GLU B 62 CD CD B 202 1555 1555 2.24 LINK OE2 GLU B 62 CD CD B 202 1555 1555 2.36 LINK SG CYS B 77 CD CD B 201 1555 1555 2.56 LINK OD1 ASN B 81 CD CD B 201 1555 1555 2.35 LINK ND1 HIS B 87 CD CD B 202 1555 1555 2.27 LINK ND1 HIS B 90 CD CD B 202 1555 1555 2.48 SITE 1 AC1 4 CYS A 77 ASN A 81 CYS B 112 CYS B 119 SITE 1 AC2 4 GLU A 62 HIS A 87 HIS A 90 HIS A 140 SITE 1 AC3 4 CYS A 112 CYS A 119 CYS B 77 ASN B 81 SITE 1 AC4 4 HIS A 145 GLU B 62 HIS B 87 HIS B 90 CRYST1 131.490 131.490 85.118 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007605 0.004391 0.000000 0.00000 SCALE2 0.000000 0.008782 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011748 0.00000