HEADER PROTEIN BINDING 18-FEB-19 6JHK TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS RSBS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RSBS NEGATIVE REGULATOR OF SIGMA-B; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: RSBT ANTAGONIST PROTEIN RSBS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: B4122_0858, B4417_4413, CJ481_02205, ETA10_02695, ETK61_02665, SOURCE 5 ETK71_02600; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS RSBS, STRESSOSOME, ICOSAHEDRON, STAS DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR E.KWON,D.PATHAK,P.DAHAL,D.Y.KIM REVDAT 2 20-NOV-19 6JHK 1 JRNL REVDAT 1 11-SEP-19 6JHK 0 JRNL AUTH E.KWON,D.PATHAK,H.U.KIM,P.DAHAL,S.C.HA,S.S.LEE,H.JEONG, JRNL AUTH 2 D.JEOUNG,H.W.CHANG,H.S.JUNG,D.Y.KIM JRNL TITL STRUCTURAL INSIGHTS INTO STRESSOSOME ASSEMBLY. JRNL REF IUCRJ V. 6 938 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31576226 JRNL DOI 10.1107/S205225251900945X REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2313 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 17280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8682 - 7.0701 0.87 1197 127 0.1697 0.2071 REMARK 3 2 7.0701 - 5.6240 1.00 1330 145 0.2256 0.2550 REMARK 3 3 5.6240 - 4.9166 1.00 1321 151 0.2046 0.2347 REMARK 3 4 4.9166 - 4.4687 1.00 1309 149 0.1850 0.2028 REMARK 3 5 4.4687 - 4.1493 1.00 1301 144 0.1820 0.2132 REMARK 3 6 4.1493 - 3.9052 1.00 1287 149 0.2200 0.2487 REMARK 3 7 3.9052 - 3.7100 1.00 1314 142 0.2252 0.2409 REMARK 3 8 3.7100 - 3.5488 1.00 1299 148 0.2177 0.2296 REMARK 3 9 3.5488 - 3.4124 1.00 1317 147 0.2605 0.3158 REMARK 3 10 3.4124 - 3.2948 1.00 1289 145 0.2843 0.2935 REMARK 3 11 3.2948 - 3.1919 1.00 1299 140 0.2939 0.3532 REMARK 3 12 3.1919 - 3.1008 1.00 1285 145 0.2879 0.3218 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 92.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4473 REMARK 3 ANGLE : 0.717 6081 REMARK 3 CHIRALITY : 0.049 796 REMARK 3 PLANARITY : 0.003 741 REMARK 3 DIHEDRAL : 13.277 2741 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JHK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300011147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17310 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.970 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, LISO4, PH 6.0, BATCH MODE, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 89.60050 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 89.60050 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 89.60050 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 89.60050 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 89.60050 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 89.60050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 179.20100 REMARK 350 BIOMT2 2 0.000000 0.000000 -1.000000 179.20100 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 358.40200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 358.40200 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -179.20100 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 179.20100 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 HIS A 3 REMARK 465 GLY A 120 REMARK 465 GLU A 121 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 HIS B 3 REMARK 465 PRO B 4 REMARK 465 GLY B 120 REMARK 465 GLU B 121 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ARG C 2 REMARK 465 HIS C 3 REMARK 465 PRO C 4 REMARK 465 GLY C 120 REMARK 465 GLU C 121 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 ARG D 2 REMARK 465 HIS D 3 REMARK 465 PRO D 4 REMARK 465 GLY D 120 REMARK 465 GLU D 121 REMARK 465 GLY E -1 REMARK 465 SER E 0 REMARK 465 MET E 1 REMARK 465 ARG E 2 REMARK 465 HIS E 3 REMARK 465 PRO E 4 REMARK 465 GLY E 120 REMARK 465 GLU E 121 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP C 50 OG1 THR C 52 2.10 REMARK 500 O GLU D 33 ND2 ASN D 37 2.11 REMARK 500 OD1 ASP D 24 OG1 THR D 27 2.14 REMARK 500 OD1 ASP B 50 OG1 THR B 52 2.17 REMARK 500 O LYS C 38 OG1 THR C 42 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR C 12 OE2 GLU C 113 2755 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 12 -119.28 57.08 REMARK 500 ALA A 98 64.10 -68.55 REMARK 500 TYR B 12 -110.57 59.78 REMARK 500 ALA B 98 107.27 -51.68 REMARK 500 TYR C 12 -129.13 64.56 REMARK 500 ALA C 98 70.74 -64.30 REMARK 500 TYR D 12 -122.31 56.69 REMARK 500 TYR E 12 -119.44 62.78 REMARK 500 GLN E 20 57.95 -151.24 REMARK 500 GLU E 22 -165.20 -113.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU E 23 ASP E 24 149.51 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6JHK A 1 121 UNP A0A063XHI7_BACIU DBREF2 6JHK A A0A063XHI7 1 121 DBREF1 6JHK B 1 121 UNP A0A063XHI7_BACIU DBREF2 6JHK B A0A063XHI7 1 121 DBREF1 6JHK C 1 121 UNP A0A063XHI7_BACIU DBREF2 6JHK C A0A063XHI7 1 121 DBREF1 6JHK D 1 121 UNP A0A063XHI7_BACIU DBREF2 6JHK D A0A063XHI7 1 121 DBREF1 6JHK E 1 121 UNP A0A063XHI7_BACIU DBREF2 6JHK E A0A063XHI7 1 121 SEQADV 6JHK GLY A -1 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK SER A 0 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK GLY B -1 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK SER B 0 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK GLY C -1 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK SER C 0 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK GLY D -1 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK SER D 0 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK GLY E -1 UNP A0A063XHI EXPRESSION TAG SEQADV 6JHK SER E 0 UNP A0A063XHI EXPRESSION TAG SEQRES 1 A 123 GLY SER MET ARG HIS PRO LYS ILE PRO ILE LEU LYS LEU SEQRES 2 A 123 TYR ASN CYS LEU LEU VAL SER ILE GLN TRP GLU LEU ASP SEQRES 3 A 123 ASP GLN THR ALA LEU THR PHE GLN GLU ASP LEU LEU ASN SEQRES 4 A 123 LYS ILE TYR GLU THR GLY ALA ASN GLY VAL VAL ILE ASP SEQRES 5 A 123 LEU THR SER VAL ASP MET ILE ASP SEP PHE ILE ALA LYS SEQRES 6 A 123 VAL LEU GLY ASP VAL ILE THR MET SER LYS LEU MET GLY SEQRES 7 A 123 ALA LYS VAL VAL LEU THR GLY ILE GLN PRO ALA VAL ALA SEQRES 8 A 123 VAL THR LEU ILE GLU LEU GLY ILE ALA LEU GLU GLU ILE SEQRES 9 A 123 GLU THR ALA LEU ASP LEU GLU GLN GLY LEU GLU THR LEU SEQRES 10 A 123 LYS ARG GLU LEU GLY GLU SEQRES 1 B 123 GLY SER MET ARG HIS PRO LYS ILE PRO ILE LEU LYS LEU SEQRES 2 B 123 TYR ASN CYS LEU LEU VAL SER ILE GLN TRP GLU LEU ASP SEQRES 3 B 123 ASP GLN THR ALA LEU THR PHE GLN GLU ASP LEU LEU ASN SEQRES 4 B 123 LYS ILE TYR GLU THR GLY ALA ASN GLY VAL VAL ILE ASP SEQRES 5 B 123 LEU THR SER VAL ASP MET ILE ASP SEP PHE ILE ALA LYS SEQRES 6 B 123 VAL LEU GLY ASP VAL ILE THR MET SER LYS LEU MET GLY SEQRES 7 B 123 ALA LYS VAL VAL LEU THR GLY ILE GLN PRO ALA VAL ALA SEQRES 8 B 123 VAL THR LEU ILE GLU LEU GLY ILE ALA LEU GLU GLU ILE SEQRES 9 B 123 GLU THR ALA LEU ASP LEU GLU GLN GLY LEU GLU THR LEU SEQRES 10 B 123 LYS ARG GLU LEU GLY GLU SEQRES 1 C 123 GLY SER MET ARG HIS PRO LYS ILE PRO ILE LEU LYS LEU SEQRES 2 C 123 TYR ASN CYS LEU LEU VAL SER ILE GLN TRP GLU LEU ASP SEQRES 3 C 123 ASP GLN THR ALA LEU THR PHE GLN GLU ASP LEU LEU ASN SEQRES 4 C 123 LYS ILE TYR GLU THR GLY ALA ASN GLY VAL VAL ILE ASP SEQRES 5 C 123 LEU THR SER VAL ASP MET ILE ASP SEP PHE ILE ALA LYS SEQRES 6 C 123 VAL LEU GLY ASP VAL ILE THR MET SER LYS LEU MET GLY SEQRES 7 C 123 ALA LYS VAL VAL LEU THR GLY ILE GLN PRO ALA VAL ALA SEQRES 8 C 123 VAL THR LEU ILE GLU LEU GLY ILE ALA LEU GLU GLU ILE SEQRES 9 C 123 GLU THR ALA LEU ASP LEU GLU GLN GLY LEU GLU THR LEU SEQRES 10 C 123 LYS ARG GLU LEU GLY GLU SEQRES 1 D 123 GLY SER MET ARG HIS PRO LYS ILE PRO ILE LEU LYS LEU SEQRES 2 D 123 TYR ASN CYS LEU LEU VAL SER ILE GLN TRP GLU LEU ASP SEQRES 3 D 123 ASP GLN THR ALA LEU THR PHE GLN GLU ASP LEU LEU ASN SEQRES 4 D 123 LYS ILE TYR GLU THR GLY ALA ASN GLY VAL VAL ILE ASP SEQRES 5 D 123 LEU THR SER VAL ASP MET ILE ASP SEP PHE ILE ALA LYS SEQRES 6 D 123 VAL LEU GLY ASP VAL ILE THR MET SER LYS LEU MET GLY SEQRES 7 D 123 ALA LYS VAL VAL LEU THR GLY ILE GLN PRO ALA VAL ALA SEQRES 8 D 123 VAL THR LEU ILE GLU LEU GLY ILE ALA LEU GLU GLU ILE SEQRES 9 D 123 GLU THR ALA LEU ASP LEU GLU GLN GLY LEU GLU THR LEU SEQRES 10 D 123 LYS ARG GLU LEU GLY GLU SEQRES 1 E 123 GLY SER MET ARG HIS PRO LYS ILE PRO ILE LEU LYS LEU SEQRES 2 E 123 TYR ASN CYS LEU LEU VAL SER ILE GLN TRP GLU LEU ASP SEQRES 3 E 123 ASP GLN THR ALA LEU THR PHE GLN GLU ASP LEU LEU ASN SEQRES 4 E 123 LYS ILE TYR GLU THR GLY ALA ASN GLY VAL VAL ILE ASP SEQRES 5 E 123 LEU THR SER VAL ASP MET ILE ASP SEP PHE ILE ALA LYS SEQRES 6 E 123 VAL LEU GLY ASP VAL ILE THR MET SER LYS LEU MET GLY SEQRES 7 E 123 ALA LYS VAL VAL LEU THR GLY ILE GLN PRO ALA VAL ALA SEQRES 8 E 123 VAL THR LEU ILE GLU LEU GLY ILE ALA LEU GLU GLU ILE SEQRES 9 E 123 GLU THR ALA LEU ASP LEU GLU GLN GLY LEU GLU THR LEU SEQRES 10 E 123 LYS ARG GLU LEU GLY GLU MODRES 6JHK SEP A 59 SER MODIFIED RESIDUE MODRES 6JHK SEP B 59 SER MODIFIED RESIDUE MODRES 6JHK SEP C 59 SER MODIFIED RESIDUE MODRES 6JHK SEP D 59 SER MODIFIED RESIDUE MODRES 6JHK SEP E 59 SER MODIFIED RESIDUE HET SEP A 59 10 HET SEP B 59 10 HET SEP C 59 10 HET SEP D 59 10 HET SEP E 59 10 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 5(C3 H8 N O6 P) HELIX 1 AA1 ASP A 24 GLY A 43 1 20 HELIX 2 AA2 ASP A 58 GLY A 76 1 19 HELIX 3 AA3 GLN A 85 LEU A 95 1 11 HELIX 4 AA4 ASP A 107 LEU A 119 1 13 HELIX 5 AA5 ASP B 24 GLY B 43 1 20 HELIX 6 AA6 ASP B 58 GLY B 76 1 19 HELIX 7 AA7 GLN B 85 LEU B 95 1 11 HELIX 8 AA8 ASP B 107 GLU B 118 1 12 HELIX 9 AA9 ASP C 24 GLY C 43 1 20 HELIX 10 AB1 ASP C 58 GLY C 76 1 19 HELIX 11 AB2 GLN C 85 GLY C 96 1 12 HELIX 12 AB3 ASP C 107 GLU C 118 1 12 HELIX 13 AB4 ASP D 24 GLY D 43 1 20 HELIX 14 AB5 ASP D 58 GLY D 76 1 19 HELIX 15 AB6 GLN D 85 GLY D 96 1 12 HELIX 16 AB7 ASP D 107 LEU D 119 1 13 HELIX 17 AB8 ASP E 24 GLY E 43 1 20 HELIX 18 AB9 ASP E 58 MET E 75 1 18 HELIX 19 AC1 GLN E 85 LEU E 95 1 11 HELIX 20 AC2 ASP E 107 LEU E 119 1 13 SHEET 1 AA1 5 LEU A 9 LEU A 11 0 SHEET 2 AA1 5 CYS A 14 SER A 18 -1 O LEU A 16 N LEU A 9 SHEET 3 AA1 5 GLY A 46 ASP A 50 1 O GLY A 46 N LEU A 15 SHEET 4 AA1 5 LYS A 78 THR A 82 1 O VAL A 80 N ILE A 49 SHEET 5 AA1 5 THR A 104 ALA A 105 1 O ALA A 105 N LEU A 81 SHEET 1 AA2 5 LEU B 9 LEU B 11 0 SHEET 2 AA2 5 CYS B 14 SER B 18 -1 O LEU B 16 N LEU B 9 SHEET 3 AA2 5 GLY B 46 ASP B 50 1 O VAL B 48 N LEU B 15 SHEET 4 AA2 5 LYS B 78 THR B 82 1 O LYS B 78 N VAL B 47 SHEET 5 AA2 5 GLU B 103 ALA B 105 1 O ALA B 105 N LEU B 81 SHEET 1 AA3 5 LEU C 9 LEU C 11 0 SHEET 2 AA3 5 CYS C 14 SER C 18 -1 O LEU C 16 N LEU C 9 SHEET 3 AA3 5 GLY C 46 ASP C 50 1 O ASP C 50 N VAL C 17 SHEET 4 AA3 5 LYS C 78 THR C 82 1 O VAL C 80 N ILE C 49 SHEET 5 AA3 5 GLU C 103 ALA C 105 1 O ALA C 105 N LEU C 81 SHEET 1 AA4 5 ILE D 8 LEU D 11 0 SHEET 2 AA4 5 CYS D 14 SER D 18 -1 O CYS D 14 N LEU D 11 SHEET 3 AA4 5 GLY D 46 ASP D 50 1 O VAL D 48 N LEU D 15 SHEET 4 AA4 5 LYS D 78 THR D 82 1 O LYS D 78 N VAL D 47 SHEET 5 AA4 5 THR D 104 ALA D 105 1 O ALA D 105 N LEU D 81 SHEET 1 AA5 5 LEU E 9 LEU E 11 0 SHEET 2 AA5 5 CYS E 14 SER E 18 -1 O LEU E 16 N LEU E 9 SHEET 3 AA5 5 GLY E 46 ASP E 50 1 O ASP E 50 N VAL E 17 SHEET 4 AA5 5 LYS E 78 THR E 82 1 O VAL E 80 N ILE E 49 SHEET 5 AA5 5 GLU E 103 ALA E 105 1 O GLU E 103 N LEU E 81 LINK C ASP A 58 N SEP A 59 1555 1555 1.33 LINK C SEP A 59 N PHE A 60 1555 1555 1.33 LINK C ASP B 58 N SEP B 59 1555 1555 1.33 LINK C SEP B 59 N PHE B 60 1555 1555 1.33 LINK C ASP C 58 N SEP C 59 1555 1555 1.33 LINK C SEP C 59 N PHE C 60 1555 1555 1.33 LINK C ASP D 58 N SEP D 59 1555 1555 1.33 LINK C SEP D 59 N PHE D 60 1555 1555 1.33 LINK C ASP E 58 N SEP E 59 1555 1555 1.33 LINK C SEP E 59 N PHE E 60 1555 1555 1.33 CISPEP 1 LEU A 95 GLY A 96 0 0.70 CISPEP 2 TRP C 21 GLU C 22 0 15.18 CISPEP 3 TRP E 21 GLU E 22 0 -1.92 CRYST1 179.201 179.201 179.201 90.00 90.00 90.00 I 2 3 120 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005580 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005580 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005580 0.00000