HEADER TRANSFERASE 23-FEB-19 6JIR TITLE CRYSTAL STRUCTURE OF C. CRESCENTUS BETA SLIDING CLAMP WITH PEG BOUND TITLE 2 TO PUTATIVE BETA-MOTIF TETHERING REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA SLIDING CLAMP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SLIDING CLAMP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES CB15; SOURCE 3 ORGANISM_COMMON: CAULOBACTER CRESCENTUS; SOURCE 4 ORGANISM_TAXID: 190650; SOURCE 5 GENE: DNAN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS CAULOBACTER CRESCENTUS, PEPTIDE BOUND, HOMODIMER, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.JIANG,M.TENG,X.LI REVDAT 3 22-NOV-23 6JIR 1 REMARK REVDAT 2 10-JUN-20 6JIR 1 JRNL REVDAT 1 27-NOV-19 6JIR 0 JRNL AUTH X.JIANG,L.ZHANG,J.AN,M.WANG,M.TENG,Q.GUO,X.LI JRNL TITL CAULOBACTER CRESCENTUS BETA SLIDING CLAMP EMPLOYS A JRNL TITL 2 NONCANONICAL REGULATORY MODEL OF DNA REPLICATION. JRNL REF FEBS J. V. 287 2292 2020 JRNL REFN ISSN 1742-464X JRNL PMID 31725950 JRNL DOI 10.1111/FEBS.15138 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 74116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3737 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5119 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 267 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5660 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 364 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : -1.59000 REMARK 3 B33 (A**2) : 0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.213 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.764 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5824 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5703 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7896 ; 1.500 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13101 ; 0.940 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 750 ; 6.623 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 244 ;36.624 ;23.648 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 958 ;11.995 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;13.628 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 929 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6566 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1225 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3012 ; 2.493 ; 3.136 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3011 ; 2.491 ; 3.136 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3758 ; 2.598 ; 4.692 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3759 ; 2.599 ; 4.693 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2812 ; 2.603 ; 3.466 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2813 ; 2.604 ; 3.467 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4139 ; 2.522 ; 5.050 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6254 ; 2.719 ;24.920 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6137 ; 2.695 ;24.767 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 11527 ; 4.611 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 118 ;11.803 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 11687 ; 4.519 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6JIR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300011190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74116 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : 0.19400 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4TR8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG1000, 0.2 M NACL AND 0.1 M REMARK 280 NA/K PHOSPHATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.36200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.76350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.36200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 61.76350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 69.72351 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 74.44903 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B 93 REMARK 465 ASP B 94 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -2 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 95 CG OD1 OD2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 MET A 303 CG SD CE REMARK 470 VAL A 372 CG1 CG2 REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 165 CG OD1 ND2 REMARK 470 GLU B 169 CG CD OE1 OE2 REMARK 470 VAL B 194 CG1 CG2 REMARK 470 ARG B 252 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 2 119.11 -160.72 REMARK 500 LEU A 49 -36.08 70.78 REMARK 500 ASP A 95 64.43 -119.53 REMARK 500 ASN A 157 40.29 -85.63 REMARK 500 SER A 284 59.18 -96.82 REMARK 500 GLU A 304 46.98 -106.94 REMARK 500 ALA A 305 18.89 57.37 REMARK 500 ALA A 347 -96.95 -108.47 REMARK 500 LEU B 49 -24.48 74.48 REMARK 500 PRO B 96 39.01 -96.13 REMARK 500 SER B 122 43.39 -145.83 REMARK 500 ARG B 181 167.28 179.37 REMARK 500 VAL B 194 130.37 -172.08 REMARK 500 ASP B 249 98.91 -65.64 REMARK 500 ALA B 347 -109.02 -111.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 403 DBREF 6JIR A 1 372 UNP P0CAU5 DPO3B_CAUVC 1 372 DBREF 6JIR B 1 372 UNP P0CAU5 DPO3B_CAUVC 1 372 SEQADV 6JIR MET A -19 UNP P0CAU5 INITIATING METHIONINE SEQADV 6JIR GLY A -18 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER A -17 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER A -16 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -15 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -14 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -13 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -12 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -11 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS A -10 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER A -9 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER A -8 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY A -7 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR LEU A -6 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR VAL A -5 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR PRO A -4 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY A -3 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR ARG A -2 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY A -1 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER A 0 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR MET B -19 UNP P0CAU5 INITIATING METHIONINE SEQADV 6JIR GLY B -18 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER B -17 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER B -16 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -15 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -14 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -13 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -12 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -11 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR HIS B -10 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER B -9 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER B -8 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY B -7 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR LEU B -6 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR VAL B -5 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR PRO B -4 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY B -3 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR ARG B -2 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR GLY B -1 UNP P0CAU5 EXPRESSION TAG SEQADV 6JIR SER B 0 UNP P0CAU5 EXPRESSION TAG SEQRES 1 A 392 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 392 LEU VAL PRO GLY ARG GLY SER MET LYS LEU THR ILE GLU SEQRES 3 A 392 ARG ALA ALA LEU LEU LYS ALA LEU GLY HIS VAL GLN SER SEQRES 4 A 392 VAL VAL GLU ARG ARG ASN THR ILE PRO ILE LEU SER ASN SEQRES 5 A 392 ILE LEU LEU SER ALA GLU GLY ASP ARG LEU SER PHE SER SEQRES 6 A 392 ALA THR ASP LEU ASP MET GLU ILE ILE ASP GLU GLY PHE SEQRES 7 A 392 ALA GLN ILE ASP VAL PRO GLY GLN ILE THR ALA PRO ALA SEQRES 8 A 392 HIS THR LEU TYR GLU ILE VAL ARG LYS LEU PRO ASP GLY SEQRES 9 A 392 ALA ASP VAL SER LEU SER PHE SER GLY ASP ASP PRO ARG SEQRES 10 A 392 LEU VAL ILE GLN ALA GLY ARG SER ARG PHE ASN LEU PRO SEQRES 11 A 392 VAL LEU PRO ALA GLY ASP PHE PRO VAL MET SER SER ASP SEQRES 12 A 392 GLY LEU SER SER ARG ILE ALA VAL ASP THR ASN GLU LEU SEQRES 13 A 392 ILE ARG LEU ILE ASP LYS THR ARG PHE ALA ILE SER THR SEQRES 14 A 392 GLU GLU THR ARG TYR TYR LEU ASN GLY LEU TYR VAL HIS SEQRES 15 A 392 THR VAL ASN GLU GLY GLY GLU THR LYS LEU ARG ALA VAL SEQRES 16 A 392 ALA THR ASP GLY HIS ARG LEU ALA LEU ALA GLU MET PRO SEQRES 17 A 392 ALA PRO GLU GLY ALA VAL GLY ILE PRO GLY VAL ILE VAL SEQRES 18 A 392 PRO ARG LYS THR ILE ALA GLU ALA ARG ARG LEU MET GLU SEQRES 19 A 392 SER ALA GLY GLU THR VAL ASP LEU GLN VAL SER PRO GLN SEQRES 20 A 392 LYS VAL ARG PHE GLU PHE GLY ALA ALA ALA LEU THR SER SEQRES 21 A 392 LYS VAL ILE ASP GLY ALA PHE PRO ASP TYR MET ARG VAL SEQRES 22 A 392 ILE PRO ARG ASP ASN ALA LYS ILE LEU THR LEU ASP ASN SEQRES 23 A 392 ASP LEU PHE ALA LYS ALA VAL ASP ARG VAL ALA THR ILE SEQRES 24 A 392 SER ALA GLU LYS SER ARG SER VAL LYS LEU ALA VAL GLU SEQRES 25 A 392 PRO GLY ARG ILE THR LEU THR VAL ARG ASN MET GLU ALA SEQRES 26 A 392 GLY GLN ALA VAL GLU GLU VAL GLU VAL ASP TYR ASP GLY SEQRES 27 A 392 GLU PRO PHE GLU ILE GLY PHE ASN ALA ARG TYR LEU LEU SEQRES 28 A 392 ASP VAL CYS GLY GLN ILE ALA GLY PRO GLN ALA GLU PHE SEQRES 29 A 392 ARG PHE ALA ASP PRO ALA SER PRO THR LEU VAL VAL ASP SEQRES 30 A 392 PRO VAL ASP PRO GLY VAL LYS TYR VAL LEU MET PRO LEU SEQRES 31 A 392 ARG VAL SEQRES 1 B 392 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 392 LEU VAL PRO GLY ARG GLY SER MET LYS LEU THR ILE GLU SEQRES 3 B 392 ARG ALA ALA LEU LEU LYS ALA LEU GLY HIS VAL GLN SER SEQRES 4 B 392 VAL VAL GLU ARG ARG ASN THR ILE PRO ILE LEU SER ASN SEQRES 5 B 392 ILE LEU LEU SER ALA GLU GLY ASP ARG LEU SER PHE SER SEQRES 6 B 392 ALA THR ASP LEU ASP MET GLU ILE ILE ASP GLU GLY PHE SEQRES 7 B 392 ALA GLN ILE ASP VAL PRO GLY GLN ILE THR ALA PRO ALA SEQRES 8 B 392 HIS THR LEU TYR GLU ILE VAL ARG LYS LEU PRO ASP GLY SEQRES 9 B 392 ALA ASP VAL SER LEU SER PHE SER GLY ASP ASP PRO ARG SEQRES 10 B 392 LEU VAL ILE GLN ALA GLY ARG SER ARG PHE ASN LEU PRO SEQRES 11 B 392 VAL LEU PRO ALA GLY ASP PHE PRO VAL MET SER SER ASP SEQRES 12 B 392 GLY LEU SER SER ARG ILE ALA VAL ASP THR ASN GLU LEU SEQRES 13 B 392 ILE ARG LEU ILE ASP LYS THR ARG PHE ALA ILE SER THR SEQRES 14 B 392 GLU GLU THR ARG TYR TYR LEU ASN GLY LEU TYR VAL HIS SEQRES 15 B 392 THR VAL ASN GLU GLY GLY GLU THR LYS LEU ARG ALA VAL SEQRES 16 B 392 ALA THR ASP GLY HIS ARG LEU ALA LEU ALA GLU MET PRO SEQRES 17 B 392 ALA PRO GLU GLY ALA VAL GLY ILE PRO GLY VAL ILE VAL SEQRES 18 B 392 PRO ARG LYS THR ILE ALA GLU ALA ARG ARG LEU MET GLU SEQRES 19 B 392 SER ALA GLY GLU THR VAL ASP LEU GLN VAL SER PRO GLN SEQRES 20 B 392 LYS VAL ARG PHE GLU PHE GLY ALA ALA ALA LEU THR SER SEQRES 21 B 392 LYS VAL ILE ASP GLY ALA PHE PRO ASP TYR MET ARG VAL SEQRES 22 B 392 ILE PRO ARG ASP ASN ALA LYS ILE LEU THR LEU ASP ASN SEQRES 23 B 392 ASP LEU PHE ALA LYS ALA VAL ASP ARG VAL ALA THR ILE SEQRES 24 B 392 SER ALA GLU LYS SER ARG SER VAL LYS LEU ALA VAL GLU SEQRES 25 B 392 PRO GLY ARG ILE THR LEU THR VAL ARG ASN MET GLU ALA SEQRES 26 B 392 GLY GLN ALA VAL GLU GLU VAL GLU VAL ASP TYR ASP GLY SEQRES 27 B 392 GLU PRO PHE GLU ILE GLY PHE ASN ALA ARG TYR LEU LEU SEQRES 28 B 392 ASP VAL CYS GLY GLN ILE ALA GLY PRO GLN ALA GLU PHE SEQRES 29 B 392 ARG PHE ALA ASP PRO ALA SER PRO THR LEU VAL VAL ASP SEQRES 30 B 392 PRO VAL ASP PRO GLY VAL LYS TYR VAL LEU MET PRO LEU SEQRES 31 B 392 ARG VAL HET GOL A 401 6 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET P6G A 406 19 HET PEG B 401 7 HET EDO B 402 4 HET PGE B 403 10 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM P6G HEXAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 GOL C3 H8 O3 FORMUL 4 EDO 5(C2 H6 O2) FORMUL 8 P6G C12 H26 O7 FORMUL 9 PEG C4 H10 O3 FORMUL 11 PGE C6 H14 O4 FORMUL 12 HOH *364(H2 O) HELIX 1 AA1 ARG A 7 SER A 19 1 13 HELIX 2 AA2 ILE A 27 LEU A 30 5 4 HELIX 3 AA3 ALA A 71 LEU A 81 1 11 HELIX 4 AA4 PRO A 113 PHE A 117 5 5 HELIX 5 AA5 THR A 133 LYS A 142 1 10 HELIX 6 AA6 THR A 143 ILE A 147 5 5 HELIX 7 AA7 ARG A 153 LEU A 156 5 4 HELIX 8 AA8 ARG A 203 SER A 215 1 13 HELIX 9 AA9 ASP A 249 VAL A 253 5 5 HELIX 10 AB1 ASN A 266 THR A 278 1 13 HELIX 11 AB2 ALA A 327 GLY A 335 1 9 HELIX 12 AB3 ARG B 7 SER B 19 1 13 HELIX 13 AB4 ILE B 27 LEU B 30 5 4 HELIX 14 AB5 ALA B 71 LEU B 81 1 11 HELIX 15 AB6 PRO B 113 PHE B 117 5 5 HELIX 16 AB7 THR B 133 LYS B 142 1 10 HELIX 17 AB8 THR B 143 ILE B 147 5 5 HELIX 18 AB9 TYR B 154 LEU B 156 5 3 HELIX 19 AC1 ARG B 203 GLU B 214 1 12 HELIX 20 AC2 ASN B 266 THR B 278 1 13 HELIX 21 AC3 ALA B 327 ILE B 337 1 11 SHEET 1 AA1 5 GLN A 60 VAL A 63 0 SHEET 2 AA1 5 MET A 1 GLU A 6 -1 N THR A 4 O GLN A 60 SHEET 3 AA1 5 ASP A 86 PHE A 91 -1 O VAL A 87 N ILE A 5 SHEET 4 AA1 5 LEU A 98 ALA A 102 -1 O VAL A 99 N SER A 90 SHEET 5 AA1 5 SER A 105 LEU A 109 -1 O PHE A 107 N ILE A 100 SHEET 1 AA2 8 GLY A 65 PRO A 70 0 SHEET 2 AA2 8 ASN A 32 GLU A 38 -1 N LEU A 35 O ILE A 67 SHEET 3 AA2 8 ARG A 41 THR A 47 -1 O SER A 43 N SER A 36 SHEET 4 AA2 8 MET A 51 PHE A 58 -1 O GLY A 57 N LEU A 42 SHEET 5 AA2 8 ALA A 237 LYS A 241 -1 O ALA A 237 N ILE A 54 SHEET 6 AA2 8 LYS A 228 GLU A 232 -1 N VAL A 229 O SER A 240 SHEET 7 AA2 8 THR A 219 VAL A 224 -1 N ASP A 221 O GLU A 232 SHEET 8 AA2 8 ILE A 129 ASP A 132 -1 N VAL A 131 O VAL A 220 SHEET 1 AA3 8 VAL A 199 PRO A 202 0 SHEET 2 AA3 8 GLY A 158 GLU A 166 -1 N LEU A 159 O VAL A 201 SHEET 3 AA3 8 GLU A 169 THR A 177 -1 O ARG A 173 N HIS A 162 SHEET 4 AA3 8 ARG A 181 PRO A 188 -1 O ALA A 185 N ALA A 174 SHEET 5 AA3 8 ASP A 360 LEU A 367 -1 O VAL A 366 N LEU A 182 SHEET 6 AA3 8 THR A 353 ASP A 357 -1 N THR A 353 O LEU A 367 SHEET 7 AA3 8 GLN A 341 PHE A 346 -1 N GLU A 343 O VAL A 356 SHEET 8 AA3 8 LYS A 260 ASP A 265 -1 N LEU A 262 O PHE A 344 SHEET 1 AA4 4 GLN A 307 GLU A 313 0 SHEET 2 AA4 4 ARG A 295 ARG A 301 -1 N LEU A 298 O GLU A 310 SHEET 3 AA4 4 SER A 286 GLU A 292 -1 N ALA A 290 O THR A 297 SHEET 4 AA4 4 PHE A 321 ASN A 326 -1 O ILE A 323 N LEU A 289 SHEET 1 AA5 5 GLN B 60 VAL B 63 0 SHEET 2 AA5 5 MET B 1 GLU B 6 -1 N LYS B 2 O VAL B 63 SHEET 3 AA5 5 ASP B 86 PHE B 91 -1 O VAL B 87 N ILE B 5 SHEET 4 AA5 5 LEU B 98 ALA B 102 -1 O VAL B 99 N SER B 90 SHEET 5 AA5 5 SER B 105 LEU B 109 -1 O PHE B 107 N ILE B 100 SHEET 1 AA6 8 GLY B 65 PRO B 70 0 SHEET 2 AA6 8 ASN B 32 GLU B 38 -1 N LEU B 35 O ILE B 67 SHEET 3 AA6 8 ARG B 41 THR B 47 -1 O SER B 43 N SER B 36 SHEET 4 AA6 8 MET B 51 PHE B 58 -1 O ASP B 55 N PHE B 44 SHEET 5 AA6 8 ALA B 237 LYS B 241 -1 O ALA B 237 N ILE B 54 SHEET 6 AA6 8 LYS B 228 GLU B 232 -1 N VAL B 229 O SER B 240 SHEET 7 AA6 8 THR B 219 VAL B 224 -1 N ASP B 221 O GLU B 232 SHEET 8 AA6 8 ILE B 129 ASP B 132 -1 N VAL B 131 O VAL B 220 SHEET 1 AA7 8 VAL B 199 PRO B 202 0 SHEET 2 AA7 8 GLY B 158 GLU B 166 -1 N VAL B 161 O VAL B 199 SHEET 3 AA7 8 GLU B 169 THR B 177 -1 O ARG B 173 N HIS B 162 SHEET 4 AA7 8 ARG B 181 PRO B 188 -1 O ALA B 185 N ALA B 174 SHEET 5 AA7 8 ASP B 360 LEU B 367 -1 O VAL B 366 N LEU B 182 SHEET 6 AA7 8 THR B 353 ASP B 357 -1 N THR B 353 O LEU B 367 SHEET 7 AA7 8 GLN B 341 PHE B 346 -1 N GLU B 343 O VAL B 356 SHEET 8 AA7 8 LYS B 260 ASP B 265 -1 N LEU B 262 O PHE B 344 SHEET 1 AA8 4 GLN B 307 GLU B 313 0 SHEET 2 AA8 4 ARG B 295 ARG B 301 -1 N LEU B 298 O GLU B 310 SHEET 3 AA8 4 SER B 286 GLU B 292 -1 N LYS B 288 O THR B 299 SHEET 4 AA8 4 PHE B 321 ASN B 326 -1 O ILE B 323 N LEU B 289 SITE 1 AC1 3 SER A 215 ALA A 216 GLY A 217 SITE 1 AC2 3 LYS A 271 HOH A 526 HOH A 559 SITE 1 AC3 3 ARG A 104 ARG A 106 GLU A 311 SITE 1 AC4 3 ASP A 50 PRO A 202 HOH A 587 SITE 1 AC5 2 ASN A 134 GLU A 135 SITE 1 AC6 10 GLU A 166 ARG A 173 LEU A 184 GLU A 186 SITE 2 AC6 10 ILE A 254 PRO A 255 ARG A 345 LEU A 354 SITE 3 AC6 10 PRO A 361 LYS A 364 SITE 1 AC7 3 ARG B 104 ARG B 106 GLU B 311 SITE 1 AC8 5 HIS B 180 MET B 368 PRO B 369 LEU B 370 SITE 2 AC8 5 HOH B 501 SITE 1 AC9 5 ARG B 173 LEU B 184 ILE B 254 LEU B 354 SITE 2 AC9 5 LYS B 364 CRYST1 112.724 123.527 85.975 90.00 120.01 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008871 0.000000 0.005123 0.00000 SCALE2 0.000000 0.008095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013431 0.00000