HEADER STRUCTURAL PROTEIN 25-FEB-19 6JJ7 TITLE CRYSTAL STRUCTURE OF OSHXK6-GLC COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICE HEXOKINASE 6; COMPND 3 CHAIN: A, C, E; COMPND 4 SYNONYM: HEXOKINASE-2; COMPND 5 EC: 2.7.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA JAPONICA GROUP; SOURCE 3 ORGANISM_COMMON: RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 GENE: HXK6, HXK2, OS01G0742500, LOC_OS01G53930, P0439E07.19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEXOKINASE ATP, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.HE,P.WEI,J.CHEN,H.WANG,Y.WAN,J.ZHOU,Y.ZHU,W.HUANG,L.YIN REVDAT 3 22-NOV-23 6JJ7 1 HETSYN REVDAT 2 29-JUL-20 6JJ7 1 COMPND REMARK HETNAM SITE REVDAT 1 03-JUL-19 6JJ7 0 JRNL AUTH C.HE,P.WEI,J.CHEN,H.WANG,Y.WAN,J.ZHOU,Y.ZHU,W.HUANG,L.YIN JRNL TITL CRYSTAL STRUCTURE OF OSHXK6-GLC COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 42411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7823 - 6.9831 1.00 3066 148 0.1747 0.2134 REMARK 3 2 6.9831 - 5.5452 1.00 2944 144 0.2086 0.2653 REMARK 3 3 5.5452 - 4.8450 1.00 2911 143 0.1750 0.2136 REMARK 3 4 4.8450 - 4.4023 1.00 2893 147 0.1596 0.1988 REMARK 3 5 4.4023 - 4.0869 1.00 2901 143 0.1713 0.2009 REMARK 3 6 4.0869 - 3.8461 1.00 2871 142 0.1874 0.2246 REMARK 3 7 3.8461 - 3.6535 1.00 2857 140 0.1962 0.2601 REMARK 3 8 3.6535 - 3.4945 1.00 2888 145 0.2044 0.2784 REMARK 3 9 3.4945 - 3.3600 1.00 2848 142 0.2144 0.2782 REMARK 3 10 3.3600 - 3.2441 1.00 2852 140 0.2435 0.2830 REMARK 3 11 3.2441 - 3.1427 1.00 2844 143 0.2528 0.3042 REMARK 3 12 3.1427 - 3.0529 1.00 2840 138 0.2501 0.3572 REMARK 3 13 3.0529 - 2.9725 1.00 2883 140 0.2539 0.2747 REMARK 3 14 2.9725 - 2.9000 0.99 2818 142 0.2514 0.3140 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 10989 REMARK 3 ANGLE : 1.460 14856 REMARK 3 CHIRALITY : 0.073 1686 REMARK 3 PLANARITY : 0.010 1935 REMARK 3 DIHEDRAL : 22.463 6591 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JJ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300011211. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.03132 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14540 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4QS7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M ADA 6.5, REMARK 280 30% V/V PEG 400, AND THE ADDITIVE 29 (C5) FROM KIT ADDITIVE REMARK 280 SCREENTM HR2-428 (HAMPTON RESEARCH),2MM GLUCOSE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.85467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.92733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.92733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 125.85467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 252 O ARG A 443 1.62 REMARK 500 NH2 ARG E 176 O TYR E 502 1.63 REMARK 500 NH2 ARG A 119 OE1 GLN A 133 1.82 REMARK 500 OD1 ASP E 437 CB SER E 439 1.86 REMARK 500 NH2 ARG C 119 OE1 GLN C 133 1.88 REMARK 500 OH TYR C 106 OE1 GLU C 166 1.90 REMARK 500 OE1 GLU A 160 NZ LYS A 164 1.99 REMARK 500 O THR C 261 OG SER C 327 2.03 REMARK 500 OE2 GLU C 166 NH1 ARG C 178 2.06 REMARK 500 O THR E 261 OG SER E 327 2.06 REMARK 500 NH2 ARG E 119 OE1 GLN E 133 2.09 REMARK 500 OE1 GLU A 179 OG SER A 500 2.10 REMARK 500 OD2 ASP A 437 OG SER A 439 2.12 REMARK 500 OD1 ASP E 437 N SER E 439 2.16 REMARK 500 NH1 ARG A 128 O TYR A 248 2.19 REMARK 500 O GLY A 328 CG2 THR A 365 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 167 N - CA - C ANGL. DEV. = -15.1 DEGREES REMARK 500 GLY A 227 N - CA - C ANGL. DEV. = -27.3 DEGREES REMARK 500 GLY C 167 N - CA - C ANGL. DEV. = -22.7 DEGREES REMARK 500 GLU C 474 CA - CB - CG ANGL. DEV. = 20.5 DEGREES REMARK 500 GLU C 474 OE1 - CD - OE2 ANGL. DEV. = -7.6 DEGREES REMARK 500 TYR C 502 N - CA - C ANGL. DEV. = -24.2 DEGREES REMARK 500 GLY E 227 N - CA - C ANGL. DEV. = -16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 42 -31.14 -36.68 REMARK 500 ASP A 100 37.19 -89.06 REMARK 500 ARG A 128 -129.14 62.09 REMARK 500 VAL A 145 24.33 -142.28 REMARK 500 PRO A 173 159.40 -47.83 REMARK 500 SER A 185 43.15 -80.75 REMARK 500 LYS A 203 -124.58 55.03 REMARK 500 SER A 206 92.07 -160.90 REMARK 500 ASN A 251 5.84 -67.92 REMARK 500 ILE A 326 -48.44 -132.59 REMARK 500 SER A 396 171.34 -54.18 REMARK 500 SER A 436 -51.75 143.12 REMARK 500 SER A 439 146.58 97.76 REMARK 500 SER A 498 5.34 -69.88 REMARK 500 TYR A 502 15.05 58.13 REMARK 500 ARG C 41 -79.13 -50.88 REMARK 500 ARG C 42 -22.24 -35.55 REMARK 500 ALA C 80 42.27 70.91 REMARK 500 MET C 88 71.35 43.98 REMARK 500 ASP C 100 40.05 -92.89 REMARK 500 ARG C 128 -128.04 62.97 REMARK 500 VAL C 145 23.04 -143.12 REMARK 500 SER C 185 44.88 -80.96 REMARK 500 LYS C 203 -126.41 56.20 REMARK 500 SER C 206 93.85 -160.68 REMARK 500 PRO C 435 103.92 -49.94 REMARK 500 SER C 436 1.67 -49.18 REMARK 500 ASP C 437 -91.88 -124.42 REMARK 500 GLN C 440 146.31 -32.24 REMARK 500 SER C 498 2.26 -63.97 REMARK 500 SER C 500 179.90 -55.44 REMARK 500 TYR C 502 54.00 -114.38 REMARK 500 ASP E 100 33.30 -87.28 REMARK 500 VAL E 145 27.36 -145.79 REMARK 500 SER E 185 42.70 -78.50 REMARK 500 LYS E 203 -130.85 61.26 REMARK 500 SER E 206 93.69 -161.29 REMARK 500 LYS E 276 2.08 -68.25 REMARK 500 GLU E 299 -4.44 -55.62 REMARK 500 SER E 436 -22.91 173.34 REMARK 500 ASP E 437 152.83 76.24 REMARK 500 GLN E 440 133.22 -32.58 REMARK 500 LYS E 441 50.96 100.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 6JJ7 A 39 503 UNP Q8LQ68 HXK6_ORYSJ 39 503 DBREF 6JJ7 C 39 503 UNP Q8LQ68 HXK6_ORYSJ 39 503 DBREF 6JJ7 E 39 503 UNP Q8LQ68 HXK6_ORYSJ 39 503 SEQRES 1 A 465 GLU GLU ARG ARG ARG ARG ALA ALA ALA VAL ILE GLU GLU SEQRES 2 A 465 VAL GLU GLN ARG PHE SER THR PRO THR ALA LEU LEU ARG SEQRES 3 A 465 GLY ILE ALA ASP ALA MET VAL GLU GLU MET GLU ARG GLY SEQRES 4 A 465 LEU ARG ALA ASP PRO HIS ALA PRO LEU LYS MET LEU ILE SEQRES 5 A 465 SER TYR VAL ASP ASN LEU PRO THR GLY ASP GLU HIS GLY SEQRES 6 A 465 LEU PHE TYR ALA LEU ASP LEU GLY GLY THR ASN PHE ARG SEQRES 7 A 465 VAL ILE ARG VAL GLN LEU GLY GLY ARG GLU LYS ARG VAL SEQRES 8 A 465 VAL SER GLN GLN TYR GLU GLU VAL ALA ILE PRO PRO HIS SEQRES 9 A 465 LEU MET VAL GLY THR SER MET GLU LEU PHE ASP PHE ILE SEQRES 10 A 465 ALA ALA GLU LEU GLU SER PHE VAL LYS THR GLU GLY GLU SEQRES 11 A 465 ASP PHE HIS LEU PRO GLU GLY ARG GLN ARG GLU LEU GLY SEQRES 12 A 465 PHE THR PHE SER PHE PRO VAL HIS GLN THR SER ILE SER SEQRES 13 A 465 SER GLY THR LEU ILE LYS TRP THR LYS GLY PHE SER ILE SEQRES 14 A 465 ASN GLY THR VAL GLY GLU ASP VAL VAL ALA GLU LEU SER SEQRES 15 A 465 ARG ALA MET GLU ARG GLN GLY LEU ASP MET LYS VAL THR SEQRES 16 A 465 ALA LEU VAL ASN ASP THR VAL GLY THR LEU ALA GLY GLY SEQRES 17 A 465 ARG TYR VAL ASP ASN ASP VAL ALA ALA ALA VAL ILE LEU SEQRES 18 A 465 GLY THR GLY THR ASN ALA ALA TYR VAL GLU HIS ALA ASN SEQRES 19 A 465 ALA ILE PRO LYS TRP THR GLY LEU LEU PRO ARG SER GLY SEQRES 20 A 465 ASN MET VAL ILE ASN MET GLU TRP GLY ASN PHE LYS SER SEQRES 21 A 465 GLU ARG LEU PRO ARG SER ASP TYR ASP ASN ALA LEU ASP SEQRES 22 A 465 PHE GLU SER LEU ASN PRO GLY GLU GLN ILE TYR GLU LYS SEQRES 23 A 465 MET ILE SER GLY MET TYR LEU GLY GLU ILE VAL ARG ARG SEQRES 24 A 465 ILE LEU LEU LYS LEU ALA HIS ASP ALA SER LEU PHE GLY SEQRES 25 A 465 ASP VAL VAL PRO THR LYS LEU GLU GLN ARG PHE ILE LEU SEQRES 26 A 465 ARG THR PRO ASP MET SER ALA MET HIS HIS ASP THR SER SEQRES 27 A 465 HIS ASP LEU LYS HIS LEU GLY ALA LYS LEU LYS ASP ILE SEQRES 28 A 465 LEU GLY VAL ALA ASP THR SER LEU GLU ALA ARG TYR ILE SEQRES 29 A 465 THR LEU HIS VAL CYS ASP LEU VAL ALA GLU ARG GLY ALA SEQRES 30 A 465 ARG LEU ALA ALA ALA GLY ILE TYR GLY ILE LEU LYS LYS SEQRES 31 A 465 LEU GLY ARG ASP ARG VAL PRO SER ASP GLY SER GLN LYS SEQRES 32 A 465 GLN ARG THR VAL ILE ALA LEU ASP GLY GLY LEU TYR GLU SEQRES 33 A 465 HIS TYR LYS LYS PHE ARG THR CYS LEU GLU ALA THR LEU SEQRES 34 A 465 ALA ASP LEU LEU GLY GLU GLU ALA ALA SER SER VAL VAL SEQRES 35 A 465 VAL LYS LEU ALA ASN ASP GLY SER GLY ILE GLY ALA ALA SEQRES 36 A 465 LEU LEU ALA ALA SER HIS SER GLN TYR ALA SEQRES 1 C 465 GLU GLU ARG ARG ARG ARG ALA ALA ALA VAL ILE GLU GLU SEQRES 2 C 465 VAL GLU GLN ARG PHE SER THR PRO THR ALA LEU LEU ARG SEQRES 3 C 465 GLY ILE ALA ASP ALA MET VAL GLU GLU MET GLU ARG GLY SEQRES 4 C 465 LEU ARG ALA ASP PRO HIS ALA PRO LEU LYS MET LEU ILE SEQRES 5 C 465 SER TYR VAL ASP ASN LEU PRO THR GLY ASP GLU HIS GLY SEQRES 6 C 465 LEU PHE TYR ALA LEU ASP LEU GLY GLY THR ASN PHE ARG SEQRES 7 C 465 VAL ILE ARG VAL GLN LEU GLY GLY ARG GLU LYS ARG VAL SEQRES 8 C 465 VAL SER GLN GLN TYR GLU GLU VAL ALA ILE PRO PRO HIS SEQRES 9 C 465 LEU MET VAL GLY THR SER MET GLU LEU PHE ASP PHE ILE SEQRES 10 C 465 ALA ALA GLU LEU GLU SER PHE VAL LYS THR GLU GLY GLU SEQRES 11 C 465 ASP PHE HIS LEU PRO GLU GLY ARG GLN ARG GLU LEU GLY SEQRES 12 C 465 PHE THR PHE SER PHE PRO VAL HIS GLN THR SER ILE SER SEQRES 13 C 465 SER GLY THR LEU ILE LYS TRP THR LYS GLY PHE SER ILE SEQRES 14 C 465 ASN GLY THR VAL GLY GLU ASP VAL VAL ALA GLU LEU SER SEQRES 15 C 465 ARG ALA MET GLU ARG GLN GLY LEU ASP MET LYS VAL THR SEQRES 16 C 465 ALA LEU VAL ASN ASP THR VAL GLY THR LEU ALA GLY GLY SEQRES 17 C 465 ARG TYR VAL ASP ASN ASP VAL ALA ALA ALA VAL ILE LEU SEQRES 18 C 465 GLY THR GLY THR ASN ALA ALA TYR VAL GLU HIS ALA ASN SEQRES 19 C 465 ALA ILE PRO LYS TRP THR GLY LEU LEU PRO ARG SER GLY SEQRES 20 C 465 ASN MET VAL ILE ASN MET GLU TRP GLY ASN PHE LYS SER SEQRES 21 C 465 GLU ARG LEU PRO ARG SER ASP TYR ASP ASN ALA LEU ASP SEQRES 22 C 465 PHE GLU SER LEU ASN PRO GLY GLU GLN ILE TYR GLU LYS SEQRES 23 C 465 MET ILE SER GLY MET TYR LEU GLY GLU ILE VAL ARG ARG SEQRES 24 C 465 ILE LEU LEU LYS LEU ALA HIS ASP ALA SER LEU PHE GLY SEQRES 25 C 465 ASP VAL VAL PRO THR LYS LEU GLU GLN ARG PHE ILE LEU SEQRES 26 C 465 ARG THR PRO ASP MET SER ALA MET HIS HIS ASP THR SER SEQRES 27 C 465 HIS ASP LEU LYS HIS LEU GLY ALA LYS LEU LYS ASP ILE SEQRES 28 C 465 LEU GLY VAL ALA ASP THR SER LEU GLU ALA ARG TYR ILE SEQRES 29 C 465 THR LEU HIS VAL CYS ASP LEU VAL ALA GLU ARG GLY ALA SEQRES 30 C 465 ARG LEU ALA ALA ALA GLY ILE TYR GLY ILE LEU LYS LYS SEQRES 31 C 465 LEU GLY ARG ASP ARG VAL PRO SER ASP GLY SER GLN LYS SEQRES 32 C 465 GLN ARG THR VAL ILE ALA LEU ASP GLY GLY LEU TYR GLU SEQRES 33 C 465 HIS TYR LYS LYS PHE ARG THR CYS LEU GLU ALA THR LEU SEQRES 34 C 465 ALA ASP LEU LEU GLY GLU GLU ALA ALA SER SER VAL VAL SEQRES 35 C 465 VAL LYS LEU ALA ASN ASP GLY SER GLY ILE GLY ALA ALA SEQRES 36 C 465 LEU LEU ALA ALA SER HIS SER GLN TYR ALA SEQRES 1 E 465 GLU GLU ARG ARG ARG ARG ALA ALA ALA VAL ILE GLU GLU SEQRES 2 E 465 VAL GLU GLN ARG PHE SER THR PRO THR ALA LEU LEU ARG SEQRES 3 E 465 GLY ILE ALA ASP ALA MET VAL GLU GLU MET GLU ARG GLY SEQRES 4 E 465 LEU ARG ALA ASP PRO HIS ALA PRO LEU LYS MET LEU ILE SEQRES 5 E 465 SER TYR VAL ASP ASN LEU PRO THR GLY ASP GLU HIS GLY SEQRES 6 E 465 LEU PHE TYR ALA LEU ASP LEU GLY GLY THR ASN PHE ARG SEQRES 7 E 465 VAL ILE ARG VAL GLN LEU GLY GLY ARG GLU LYS ARG VAL SEQRES 8 E 465 VAL SER GLN GLN TYR GLU GLU VAL ALA ILE PRO PRO HIS SEQRES 9 E 465 LEU MET VAL GLY THR SER MET GLU LEU PHE ASP PHE ILE SEQRES 10 E 465 ALA ALA GLU LEU GLU SER PHE VAL LYS THR GLU GLY GLU SEQRES 11 E 465 ASP PHE HIS LEU PRO GLU GLY ARG GLN ARG GLU LEU GLY SEQRES 12 E 465 PHE THR PHE SER PHE PRO VAL HIS GLN THR SER ILE SER SEQRES 13 E 465 SER GLY THR LEU ILE LYS TRP THR LYS GLY PHE SER ILE SEQRES 14 E 465 ASN GLY THR VAL GLY GLU ASP VAL VAL ALA GLU LEU SER SEQRES 15 E 465 ARG ALA MET GLU ARG GLN GLY LEU ASP MET LYS VAL THR SEQRES 16 E 465 ALA LEU VAL ASN ASP THR VAL GLY THR LEU ALA GLY GLY SEQRES 17 E 465 ARG TYR VAL ASP ASN ASP VAL ALA ALA ALA VAL ILE LEU SEQRES 18 E 465 GLY THR GLY THR ASN ALA ALA TYR VAL GLU HIS ALA ASN SEQRES 19 E 465 ALA ILE PRO LYS TRP THR GLY LEU LEU PRO ARG SER GLY SEQRES 20 E 465 ASN MET VAL ILE ASN MET GLU TRP GLY ASN PHE LYS SER SEQRES 21 E 465 GLU ARG LEU PRO ARG SER ASP TYR ASP ASN ALA LEU ASP SEQRES 22 E 465 PHE GLU SER LEU ASN PRO GLY GLU GLN ILE TYR GLU LYS SEQRES 23 E 465 MET ILE SER GLY MET TYR LEU GLY GLU ILE VAL ARG ARG SEQRES 24 E 465 ILE LEU LEU LYS LEU ALA HIS ASP ALA SER LEU PHE GLY SEQRES 25 E 465 ASP VAL VAL PRO THR LYS LEU GLU GLN ARG PHE ILE LEU SEQRES 26 E 465 ARG THR PRO ASP MET SER ALA MET HIS HIS ASP THR SER SEQRES 27 E 465 HIS ASP LEU LYS HIS LEU GLY ALA LYS LEU LYS ASP ILE SEQRES 28 E 465 LEU GLY VAL ALA ASP THR SER LEU GLU ALA ARG TYR ILE SEQRES 29 E 465 THR LEU HIS VAL CYS ASP LEU VAL ALA GLU ARG GLY ALA SEQRES 30 E 465 ARG LEU ALA ALA ALA GLY ILE TYR GLY ILE LEU LYS LYS SEQRES 31 E 465 LEU GLY ARG ASP ARG VAL PRO SER ASP GLY SER GLN LYS SEQRES 32 E 465 GLN ARG THR VAL ILE ALA LEU ASP GLY GLY LEU TYR GLU SEQRES 33 E 465 HIS TYR LYS LYS PHE ARG THR CYS LEU GLU ALA THR LEU SEQRES 34 E 465 ALA ASP LEU LEU GLY GLU GLU ALA ALA SER SER VAL VAL SEQRES 35 E 465 VAL LYS LEU ALA ASN ASP GLY SER GLY ILE GLY ALA ALA SEQRES 36 E 465 LEU LEU ALA ALA SER HIS SER GLN TYR ALA HET BGC A 601 12 HET BGC C 601 12 HET BGC E 601 12 HETNAM BGC BETA-D-GLUCOPYRANOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 4 BGC 3(C6 H12 O6) HELIX 1 AA1 GLU A 40 PHE A 56 1 17 HELIX 2 AA2 PRO A 59 ARG A 79 1 21 HELIX 3 AA3 GLY A 124 ARG A 128 1 5 HELIX 4 AA4 PRO A 140 VAL A 145 5 6 HELIX 5 AA5 THR A 147 VAL A 163 1 17 HELIX 6 AA6 LYS A 164 GLU A 166 5 3 HELIX 7 AA7 ASP A 214 ARG A 225 1 12 HELIX 8 AA8 ASN A 237 TYR A 248 1 12 HELIX 9 AA9 ASN A 272 ILE A 274 5 3 HELIX 10 AB1 GLU A 292 PHE A 296 5 5 HELIX 11 AB2 SER A 304 GLU A 313 1 10 HELIX 12 AB3 TYR A 322 ILE A 326 5 5 HELIX 13 AB4 TYR A 330 ALA A 346 1 17 HELIX 14 AB5 PRO A 354 GLN A 359 5 6 HELIX 15 AB6 ARG A 364 HIS A 373 1 10 HELIX 16 AB7 LEU A 379 GLY A 391 1 13 HELIX 17 AB8 SER A 396 LEU A 429 1 34 HELIX 18 AB9 GLY A 450 TYR A 456 1 7 HELIX 19 AC1 TYR A 456 GLY A 472 1 17 HELIX 20 AC2 GLY A 472 SER A 477 1 6 HELIX 21 AC3 ASP A 486 SER A 498 1 13 HELIX 22 AC4 GLU C 40 PHE C 56 1 17 HELIX 23 AC5 PRO C 59 ARG C 79 1 21 HELIX 24 AC6 GLY C 124 ARG C 128 1 5 HELIX 25 AC7 PRO C 140 VAL C 145 5 6 HELIX 26 AC8 THR C 147 LYS C 164 1 18 HELIX 27 AC9 ASP C 214 ARG C 225 1 12 HELIX 28 AD1 ASN C 237 TYR C 248 1 12 HELIX 29 AD2 ASN C 272 ILE C 274 5 3 HELIX 30 AD3 GLU C 292 PHE C 296 5 5 HELIX 31 AD4 SER C 304 GLU C 313 1 10 HELIX 32 AD5 TYR C 322 ILE C 326 5 5 HELIX 33 AD6 SER C 327 ALA C 346 1 20 HELIX 34 AD7 PRO C 354 GLN C 359 5 6 HELIX 35 AD8 ARG C 364 HIS C 373 1 10 HELIX 36 AD9 LYS C 380 GLY C 391 1 12 HELIX 37 AE1 SER C 396 LEU C 429 1 34 HELIX 38 AE2 GLY C 450 TYR C 456 1 7 HELIX 39 AE3 TYR C 456 LEU C 471 1 16 HELIX 40 AE4 GLU C 474 SER C 477 5 4 HELIX 41 AE5 ASP C 486 SER C 498 1 13 HELIX 42 AE6 GLU E 40 SER E 57 1 18 HELIX 43 AE7 PRO E 59 ARG E 79 1 21 HELIX 44 AE8 GLY E 124 ARG E 128 1 5 HELIX 45 AE9 PRO E 140 VAL E 145 5 6 HELIX 46 AF1 THR E 147 LYS E 164 1 18 HELIX 47 AF2 ASP E 214 ARG E 225 1 12 HELIX 48 AF3 ASN E 237 ASP E 250 1 14 HELIX 49 AF4 ASN E 272 ILE E 274 5 3 HELIX 50 AF5 GLU E 292 PHE E 296 5 5 HELIX 51 AF6 SER E 304 GLU E 313 1 10 HELIX 52 AF7 TYR E 322 ILE E 326 5 5 HELIX 53 AF8 TYR E 330 ALA E 346 1 17 HELIX 54 AF9 PRO E 354 GLN E 359 5 6 HELIX 55 AG1 ARG E 364 HIS E 373 1 10 HELIX 56 AG2 LEU E 379 GLY E 391 1 13 HELIX 57 AG3 SER E 396 LEU E 429 1 34 HELIX 58 AG4 GLY E 450 TYR E 456 1 7 HELIX 59 AG5 TYR E 456 LEU E 471 1 16 HELIX 60 AG6 GLY E 472 SER E 477 1 6 HELIX 61 AG7 ASP E 486 SER E 498 1 13 SHEET 1 AA1 6 LEU A 89 ILE A 90 0 SHEET 2 AA1 6 ASN A 286 ASN A 290 -1 O ASN A 290 N LEU A 89 SHEET 3 AA1 6 THR A 263 HIS A 270 -1 N GLU A 269 O MET A 287 SHEET 4 AA1 6 VAL A 253 LEU A 259 -1 N ILE A 258 O ASN A 264 SHEET 5 AA1 6 THR A 444 ASP A 449 1 O ALA A 447 N VAL A 257 SHEET 6 AA1 6 VAL A 479 LEU A 483 1 O LYS A 482 N LEU A 448 SHEET 1 AA2 5 VAL A 129 ALA A 138 0 SHEET 2 AA2 5 ASN A 114 GLY A 123 -1 N GLN A 121 O VAL A 130 SHEET 3 AA2 5 HIS A 102 LEU A 110 -1 N GLY A 103 O LEU A 122 SHEET 4 AA2 5 ARG A 178 PHE A 184 1 O GLY A 181 N LEU A 108 SHEET 5 AA2 5 MET A 230 VAL A 236 1 O VAL A 236 N PHE A 182 SHEET 1 AA3 2 VAL A 188 SER A 192 0 SHEET 2 AA3 2 SER A 195 LEU A 198 -1 O THR A 197 N HIS A 189 SHEET 1 AA4 6 LEU C 89 ILE C 90 0 SHEET 2 AA4 6 ASN C 286 ASN C 290 -1 O ASN C 290 N LEU C 89 SHEET 3 AA4 6 THR C 263 HIS C 270 -1 N TYR C 267 O ILE C 289 SHEET 4 AA4 6 VAL C 253 LEU C 259 -1 N ILE C 258 O ASN C 264 SHEET 5 AA4 6 THR C 444 ASP C 449 1 O ALA C 447 N VAL C 257 SHEET 6 AA4 6 VAL C 479 LEU C 483 1 O VAL C 480 N ILE C 446 SHEET 1 AA5 5 VAL C 129 ALA C 138 0 SHEET 2 AA5 5 ASN C 114 GLY C 123 -1 N PHE C 115 O VAL C 137 SHEET 3 AA5 5 HIS C 102 LEU C 110 -1 N ALA C 107 O ILE C 118 SHEET 4 AA5 5 ARG C 178 PHE C 184 1 O THR C 183 N LEU C 108 SHEET 5 AA5 5 MET C 230 VAL C 236 1 O ALA C 234 N PHE C 182 SHEET 1 AA6 2 VAL C 188 SER C 192 0 SHEET 2 AA6 2 SER C 195 LEU C 198 -1 O SER C 195 N THR C 191 SHEET 1 AA7 6 LEU E 89 ILE E 90 0 SHEET 2 AA7 6 ASN E 286 ASN E 290 -1 O ASN E 290 N LEU E 89 SHEET 3 AA7 6 THR E 263 HIS E 270 -1 N GLU E 269 O MET E 287 SHEET 4 AA7 6 VAL E 253 LEU E 259 -1 N ALA E 256 O ALA E 266 SHEET 5 AA7 6 THR E 444 ASP E 449 1 O ALA E 447 N VAL E 257 SHEET 6 AA7 6 VAL E 479 LEU E 483 1 O LYS E 482 N LEU E 448 SHEET 1 AA8 5 VAL E 129 ALA E 138 0 SHEET 2 AA8 5 ASN E 114 GLY E 123 -1 N GLN E 121 O VAL E 130 SHEET 3 AA8 5 HIS E 102 LEU E 110 -1 N GLY E 103 O LEU E 122 SHEET 4 AA8 5 ARG E 178 PHE E 184 1 O THR E 183 N LEU E 108 SHEET 5 AA8 5 MET E 230 VAL E 236 1 O VAL E 236 N PHE E 184 SHEET 1 AA9 2 VAL E 188 SER E 192 0 SHEET 2 AA9 2 SER E 195 LEU E 198 -1 O SER E 195 N THR E 191 CISPEP 1 GLU A 166 GLY A 167 0 1.84 CISPEP 2 GLN A 226 GLY A 227 0 -5.34 CISPEP 3 PRO A 435 SER A 436 0 9.06 CISPEP 4 GLY A 438 SER A 439 0 1.18 CISPEP 5 GLU C 166 GLY C 167 0 3.18 CISPEP 6 GLN C 226 GLY C 227 0 -14.33 CISPEP 7 ASP C 437 GLY C 438 0 2.41 CISPEP 8 GLN C 501 TYR C 502 0 -5.71 CISPEP 9 LYS E 127 ARG E 128 0 -2.99 CISPEP 10 GLU E 166 GLY E 167 0 5.37 CISPEP 11 GLN E 226 GLY E 227 0 -12.03 CISPEP 12 PRO E 435 SER E 436 0 4.24 CISPEP 13 SER E 436 ASP E 437 0 -0.84 CISPEP 14 ASP E 437 GLY E 438 0 -1.85 CISPEP 15 GLN E 440 LYS E 441 0 7.25 CISPEP 16 GLN E 501 TYR E 502 0 -9.59 CRYST1 131.569 131.569 188.782 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007601 0.004388 0.000000 0.00000 SCALE2 0.000000 0.008776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005297 0.00000