data_6JJE # _entry.id 6JJE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JJE pdb_00006jje 10.2210/pdb6jje/pdb WWPDB D_1300011173 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JJE _pdbx_database_status.recvd_initial_deposition_date 2019-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Y.S.' 1 0000-0002-4948-6449 'Wei, D.G.' 2 0000-0001-7776-7320 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex (BrU)' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.S.' 1 0000-0002-4948-6449 primary 'Parkinson, G.N.' 2 ? primary 'Wagner, A.' 3 ? primary 'Wei, D.G.' 4 0000-0001-7776-7320 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 109.960 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6JJE _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.786 _cell.length_a_esd ? _cell.length_b 47.454 _cell.length_b_esd ? _cell.length_c 37.782 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JJE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*CP*(BRU)P*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3') ; 4427.686 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 3 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DC)(BRU)(DC)(DG)(DG)(DC)(DG)(DG)(DC)(DG)(DG)(DA)' _entity_poly.pdbx_seq_one_letter_code_can GGCUCGGCGGCGGA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 BRU n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DC n 1 9 DG n 1 10 DG n 1 11 DC n 1 12 DG n 1 13 DG n 1 14 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 14 _pdbx_entity_src_syn.organism_scientific 'Pseudorabies virus Ea' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 101947 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6JJE _struct_ref.pdbx_db_accession 6JJE _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JJE A 1 ? 14 ? 6JJE 1 ? 14 ? 1 14 2 1 6JJE B 1 ? 14 ? 6JJE 1 ? 14 ? 1 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JJE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.27 _exptl_crystal.description square _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Potassium cacodylate,Sodium cacodylate,Potassium chloride,Sodium chloride,hexammine cobalt(III) chloride,MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-05-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91944 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91944 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6JJE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.378 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15296 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.536 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.378 _reflns_shell.d_res_low 1.428 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.289 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 84.410 _refine.B_iso_mean 19.3874 _refine.B_iso_min 6.240 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6JJE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.3780 _refine.ls_d_res_low 31.49 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15259 _refine.ls_number_reflns_R_free 762 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.8500 _refine.ls_percent_reflns_R_free 4.9900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1976 _refine.ls_R_factor_R_free 0.2250 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1962 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.420 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6JJF _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.4800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3780 _refine_hist.d_res_low 31.49 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 700 _refine_hist.pdbx_number_residues_total 28 _refine_hist.pdbx_B_iso_mean_ligand 31.50 _refine_hist.pdbx_B_iso_mean_solvent 28.93 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 580 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.3783 1.4847 3041 . 161 2880 99.0000 . . . 0.2497 0.0000 0.2248 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 1.4847 1.6341 3063 . 130 2933 100.0000 . . . 0.2293 0.0000 0.1973 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 1.6341 1.8706 3038 . 153 2885 99.0000 . . . 0.2019 0.0000 0.1722 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 1.8706 2.3566 3075 . 153 2922 100.0000 . . . 0.2061 0.0000 0.2029 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.3566 35.5240 3042 . 165 2877 97.0000 . . . 0.2372 0.0000 0.1964 . . . . . . 5 . . . # _struct.entry_id 6JJE _struct.title 'Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex (BrU)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JJE _struct_keywords.text 'G-quadruplex, two-quartet, mixed-parallel/antiparallel, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 3 ? I N N 3 ? J N N 5 ? K N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 3 "O3'" ? ? ? 1_555 A BRU 4 P ? ? A DC 3 A BRU 4 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? A BRU 4 "O3'" ? ? ? 1_555 A DC 5 P ? ? A BRU 4 A DC 5 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale3 covale both ? B DC 3 "O3'" ? ? ? 1_555 B BRU 4 P ? ? B DC 3 B BRU 4 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale4 covale both ? B BRU 4 "O3'" ? ? ? 1_555 B DC 5 P ? ? B BRU 4 B DC 5 1_555 ? ? ? ? ? ? ? 1.601 ? ? metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 C K . K ? ? A DG 1 A K 101 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc2 metalc ? ? A DG 1 O6 ? ? ? 1_555 D K . K ? ? A DG 1 A K 102 1_555 ? ? ? ? ? ? ? 2.772 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 101 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc4 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 2.664 ? ? metalc5 metalc ? ? A DG 7 O6 ? ? ? 1_555 C K . K ? ? A DG 7 A K 101 1_555 ? ? ? ? ? ? ? 2.847 ? ? metalc6 metalc ? ? A DG 7 O6 ? ? ? 1_555 D K . K ? ? A DG 7 A K 102 1_555 ? ? ? ? ? ? ? 2.867 ? ? metalc7 metalc ? ? A DG 9 O6 ? ? ? 1_555 D K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 2.782 ? ? metalc8 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 103 1_555 ? ? ? ? ? ? ? 2.924 ? ? metalc9 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 103 1_555 ? ? ? ? ? ? ? 2.812 ? ? metalc10 metalc ? ? A DG 10 O6 ? ? ? 1_555 G NA . NA ? ? A DG 10 A NA 105 1_555 ? ? ? ? ? ? ? 3.109 ? ? metalc11 metalc ? ? A DG 12 O6 ? ? ? 1_555 D K . K ? ? A DG 12 A K 102 1_555 ? ? ? ? ? ? ? 2.798 ? ? metalc12 metalc ? ? A DG 12 O6 ? ? ? 1_555 E K . K ? ? A DG 12 A K 103 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc13 metalc ? ? A DG 13 O6 ? ? ? 1_555 E K . K ? ? A DG 13 A K 103 1_555 ? ? ? ? ? ? ? 2.761 ? ? metalc14 metalc ? ? A DG 13 O6 ? ? ? 1_555 G NA . NA ? ? A DG 13 A NA 105 1_555 ? ? ? ? ? ? ? 2.921 ? ? metalc15 metalc ? ? C K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 101 B DG 1 1_555 ? ? ? ? ? ? ? 2.874 ? ? metalc16 metalc ? ? C K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 101 B DG 2 1_555 ? ? ? ? ? ? ? 2.737 ? ? metalc17 metalc ? ? C K . K ? ? ? 1_555 B DG 6 O6 ? ? A K 101 B DG 6 1_555 ? ? ? ? ? ? ? 2.632 ? ? metalc18 metalc ? ? C K . K ? ? ? 1_555 B DG 7 O6 ? ? A K 101 B DG 7 1_555 ? ? ? ? ? ? ? 2.960 ? ? metalc19 metalc ? ? D K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 102 B DG 1 1_555 ? ? ? ? ? ? ? 2.810 ? ? metalc20 metalc ? ? D K . K ? ? ? 1_555 B DG 7 O6 ? ? A K 102 B DG 7 1_555 ? ? ? ? ? ? ? 2.773 ? ? metalc21 metalc ? ? D K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 102 B DG 9 1_555 ? ? ? ? ? ? ? 2.810 ? ? metalc22 metalc ? ? D K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 102 B DG 12 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc23 metalc ? ? E K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 103 B DG 9 1_555 ? ? ? ? ? ? ? 2.885 ? ? metalc24 metalc ? ? E K . K ? ? ? 1_555 B DG 10 O6 ? ? A K 103 B DG 10 1_555 ? ? ? ? ? ? ? 2.843 ? ? metalc25 metalc ? ? E K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 103 B DG 12 1_555 ? ? ? ? ? ? ? 2.859 ? ? metalc26 metalc ? ? E K . K ? ? ? 1_555 B DG 13 O6 ? ? A K 103 B DG 13 1_555 ? ? ? ? ? ? ? 2.744 ? ? metalc27 metalc ? ? G NA . NA ? ? ? 1_555 B DG 10 O6 ? ? A NA 105 B DG 10 1_555 ? ? ? ? ? ? ? 3.062 ? ? metalc28 metalc ? ? G NA . NA ? ? ? 1_555 B DG 13 O6 ? ? A NA 105 B DG 13 1_555 ? ? ? ? ? ? ? 2.977 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 7 N2 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 7 N1 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DG 7 O6 ? ? A DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DG 7 N7 ? ? A DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 B DG 6 N2 ? ? A DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DG 6 N1 ? ? A DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DC 5 O2 ? ? A DC 5 B DC 5 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DC 5 N4 ? ? A DC 5 B DC 5 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog11 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DG 2 O6 ? ? A DG 6 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 2 N7 ? ? A DG 6 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 7 N7 ? ? ? 1_555 B DG 1 N2 ? ? A DG 7 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DG 1 N1 ? ? A DG 7 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N7 ? ? ? 1_555 B DG 12 N2 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DG 12 N1 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 10 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 10 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 13 N2 ? ? A DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 13 N1 ? ? A DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DG 9 O6 ? ? A DG 12 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DG 9 N7 ? ? A DG 12 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 13 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 13 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B DG 1 N7 ? ? ? 1_555 B DG 7 N2 ? ? B DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DG 7 N1 ? ? B DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B DG 2 N1 ? ? ? 1_555 B DG 6 O6 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG 6 N7 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B DG 9 N1 ? ? ? 1_555 B DG 12 O6 ? ? B DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B DG 9 N2 ? ? ? 1_555 B DG 12 N7 ? ? B DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DG 10 N1 ? ? ? 1_555 B DG 13 O6 ? ? B DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 10 N2 ? ? ? 1_555 B DG 13 N7 ? ? B DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 101 ? 9 'binding site for residue K A 101' AC2 Software A K 102 ? 10 'binding site for residue K A 102' AC3 Software A K 103 ? 10 'binding site for residue K A 103' AC4 Software A NCO 104 ? 6 'binding site for residue NCO A 104' AC5 Software A NA 105 ? 9 'binding site for residue NA A 105' AC6 Software B NCO 101 ? 7 'binding site for residue NCO B 101' AC7 Software B NCO 102 ? 6 'binding site for residue NCO B 102' AC8 Software B DC 3 ? 5 'binding site for Di-nucleotide DC B 3 and BRU B 4' AC9 Software B BRU 4 ? 8 'binding site for Di-nucleotide BRU B 4 and DC B 5' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 1 ? DG A 1 . ? 1_555 ? 2 AC1 9 DG A 2 ? DG A 2 . ? 1_555 ? 3 AC1 9 DG A 6 ? DG A 6 . ? 1_555 ? 4 AC1 9 DG A 7 ? DG A 7 . ? 1_555 ? 5 AC1 9 K D . ? K A 102 . ? 1_555 ? 6 AC1 9 DG B 1 ? DG B 1 . ? 1_555 ? 7 AC1 9 DG B 2 ? DG B 2 . ? 1_555 ? 8 AC1 9 DG B 6 ? DG B 6 . ? 1_555 ? 9 AC1 9 DG B 7 ? DG B 7 . ? 1_555 ? 10 AC2 10 DG A 1 ? DG A 1 . ? 1_555 ? 11 AC2 10 DG A 7 ? DG A 7 . ? 1_555 ? 12 AC2 10 DG A 9 ? DG A 9 . ? 1_555 ? 13 AC2 10 DG A 12 ? DG A 12 . ? 1_555 ? 14 AC2 10 K C . ? K A 101 . ? 1_555 ? 15 AC2 10 K E . ? K A 103 . ? 1_555 ? 16 AC2 10 DG B 1 ? DG B 1 . ? 1_555 ? 17 AC2 10 DG B 7 ? DG B 7 . ? 1_555 ? 18 AC2 10 DG B 9 ? DG B 9 . ? 1_555 ? 19 AC2 10 DG B 12 ? DG B 12 . ? 1_555 ? 20 AC3 10 DG A 9 ? DG A 9 . ? 1_555 ? 21 AC3 10 DG A 10 ? DG A 10 . ? 1_555 ? 22 AC3 10 DG A 12 ? DG A 12 . ? 1_555 ? 23 AC3 10 DG A 13 ? DG A 13 . ? 1_555 ? 24 AC3 10 K D . ? K A 102 . ? 1_555 ? 25 AC3 10 NA G . ? NA A 105 . ? 1_555 ? 26 AC3 10 DG B 9 ? DG B 9 . ? 1_555 ? 27 AC3 10 DG B 10 ? DG B 10 . ? 1_555 ? 28 AC3 10 DG B 12 ? DG B 12 . ? 1_555 ? 29 AC3 10 DG B 13 ? DG B 13 . ? 1_555 ? 30 AC4 6 DC A 3 ? DC A 3 . ? 1_554 ? 31 AC4 6 BRU A 4 ? BRU A 4 . ? 1_554 ? 32 AC4 6 DA A 14 ? DA A 14 . ? 1_555 ? 33 AC4 6 HOH J . ? HOH A 201 . ? 1_555 ? 34 AC4 6 DC B 8 ? DC B 8 . ? 1_555 ? 35 AC4 6 DC B 11 ? DC B 11 . ? 4_554 ? 36 AC5 9 DG A 10 ? DG A 10 . ? 1_555 ? 37 AC5 9 DG A 13 ? DG A 13 . ? 1_555 ? 38 AC5 9 DA A 14 ? DA A 14 . ? 1_555 ? 39 AC5 9 DA A 14 ? DA A 14 . ? 2_554 ? 40 AC5 9 K E . ? K A 103 . ? 1_555 ? 41 AC5 9 DG B 10 ? DG B 10 . ? 1_555 ? 42 AC5 9 DG B 13 ? DG B 13 . ? 1_555 ? 43 AC5 9 DA B 14 ? DA B 14 . ? 1_555 ? 44 AC5 9 DA B 14 ? DA B 14 . ? 2_554 ? 45 AC6 7 DG B 7 ? DG B 7 . ? 4_544 ? 46 AC6 7 DC B 11 ? DC B 11 . ? 1_555 ? 47 AC6 7 DA B 14 ? DA B 14 . ? 2_554 ? 48 AC6 7 HOH K . ? HOH B 202 . ? 1_555 ? 49 AC6 7 HOH K . ? HOH B 208 . ? 1_555 ? 50 AC6 7 HOH K . ? HOH B 214 . ? 1_555 ? 51 AC6 7 HOH K . ? HOH B 237 . ? 1_555 ? 52 AC7 6 DA A 14 ? DA A 14 . ? 4_544 ? 53 AC7 6 HOH J . ? HOH A 206 . ? 4_544 ? 54 AC7 6 DG B 2 ? DG B 2 . ? 1_555 ? 55 AC7 6 HOH K . ? HOH B 207 . ? 1_555 ? 56 AC7 6 HOH K . ? HOH B 228 . ? 1_555 ? 57 AC7 6 HOH K . ? HOH B 235 . ? 1_555 ? 58 AC8 5 DC A 11 ? DC A 11 . ? 3_545 ? 59 AC8 5 DG B 2 ? DG B 2 . ? 1_555 ? 60 AC8 5 DC B 5 ? DC B 5 . ? 1_555 ? 61 AC8 5 HOH K . ? HOH B 231 . ? 1_555 ? 62 AC8 5 HOH K . ? HOH B 235 . ? 1_555 ? 63 AC9 8 DG A 2 ? DG A 2 . ? 1_555 ? 64 AC9 8 DC A 5 ? DC A 5 . ? 1_555 ? 65 AC9 8 DG A 6 ? DG A 6 . ? 1_555 ? 66 AC9 8 DG B 2 ? DG B 2 . ? 1_555 ? 67 AC9 8 DC B 3 ? DC B 3 . ? 1_555 ? 68 AC9 8 DG B 6 ? DG B 6 . ? 1_555 ? 69 AC9 8 HOH K . ? HOH B 231 . ? 1_555 ? 70 AC9 8 HOH K . ? HOH B 236 . ? 1_555 ? # _atom_sites.entry_id 6JJE _atom_sites.fract_transf_matrix[1][1] 0.022328 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008109 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021073 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028159 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C CO K N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 BRU 4 4 4 BRU BRU A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DA 14 14 14 DA DA A . n B 1 1 DG 1 1 1 DG DG B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 BRU 4 4 4 BRU BRU B . n B 1 5 DC 5 5 5 DC DC B . n B 1 6 DG 6 6 6 DG DG B . n B 1 7 DG 7 7 7 DG DG B . n B 1 8 DC 8 8 8 DC DC B . n B 1 9 DG 9 9 9 DG DG B . n B 1 10 DG 10 10 10 DG DG B . n B 1 11 DC 11 11 11 DC DC B . n B 1 12 DG 12 12 12 DG DG B . n B 1 13 DG 13 13 13 DG DG B . n B 1 14 DA 14 14 14 DA DA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 3 NCO 1 104 1 NCO NCO A . G 4 NA 1 105 1 NA NA A . H 3 NCO 1 101 2 NCO NCO B . I 3 NCO 1 102 3 NCO NCO B . J 5 HOH 1 201 20 HOH HOH A . J 5 HOH 2 202 45 HOH HOH A . J 5 HOH 3 203 50 HOH HOH A . J 5 HOH 4 204 22 HOH HOH A . J 5 HOH 5 205 57 HOH HOH A . J 5 HOH 6 206 5 HOH HOH A . J 5 HOH 7 207 27 HOH HOH A . J 5 HOH 8 208 37 HOH HOH A . J 5 HOH 9 209 17 HOH HOH A . J 5 HOH 10 210 74 HOH HOH A . J 5 HOH 11 211 1 HOH HOH A . J 5 HOH 12 212 52 HOH HOH A . J 5 HOH 13 213 83 HOH HOH A . J 5 HOH 14 214 3 HOH HOH A . J 5 HOH 15 215 65 HOH HOH A . J 5 HOH 16 216 93 HOH HOH A . J 5 HOH 17 217 58 HOH HOH A . J 5 HOH 18 218 32 HOH HOH A . J 5 HOH 19 219 30 HOH HOH A . J 5 HOH 20 220 88 HOH HOH A . J 5 HOH 21 221 75 HOH HOH A . J 5 HOH 22 222 10 HOH HOH A . J 5 HOH 23 223 35 HOH HOH A . J 5 HOH 24 224 47 HOH HOH A . J 5 HOH 25 225 48 HOH HOH A . J 5 HOH 26 226 29 HOH HOH A . J 5 HOH 27 227 41 HOH HOH A . J 5 HOH 28 228 18 HOH HOH A . J 5 HOH 29 229 25 HOH HOH A . J 5 HOH 30 230 33 HOH HOH A . J 5 HOH 31 231 28 HOH HOH A . J 5 HOH 32 232 62 HOH HOH A . J 5 HOH 33 233 7 HOH HOH A . J 5 HOH 34 234 78 HOH HOH A . J 5 HOH 35 235 91 HOH HOH A . J 5 HOH 36 236 31 HOH HOH A . J 5 HOH 37 237 81 HOH HOH A . J 5 HOH 38 238 21 HOH HOH A . J 5 HOH 39 239 2 HOH HOH A . J 5 HOH 40 240 24 HOH HOH A . J 5 HOH 41 241 15 HOH HOH A . J 5 HOH 42 242 8 HOH HOH A . J 5 HOH 43 243 68 HOH HOH A . J 5 HOH 44 244 44 HOH HOH A . J 5 HOH 45 245 63 HOH HOH A . J 5 HOH 46 246 72 HOH HOH A . J 5 HOH 47 247 92 HOH HOH A . K 5 HOH 1 201 84 HOH HOH B . K 5 HOH 2 202 76 HOH HOH B . K 5 HOH 3 203 42 HOH HOH B . K 5 HOH 4 204 55 HOH HOH B . K 5 HOH 5 205 39 HOH HOH B . K 5 HOH 6 206 80 HOH HOH B . K 5 HOH 7 207 36 HOH HOH B . K 5 HOH 8 208 56 HOH HOH B . K 5 HOH 9 209 79 HOH HOH B . K 5 HOH 10 210 85 HOH HOH B . K 5 HOH 11 211 4 HOH HOH B . K 5 HOH 12 212 38 HOH HOH B . K 5 HOH 13 213 9 HOH HOH B . K 5 HOH 14 214 6 HOH HOH B . K 5 HOH 15 215 73 HOH HOH B . K 5 HOH 16 216 64 HOH HOH B . K 5 HOH 17 217 94 HOH HOH B . K 5 HOH 18 218 40 HOH HOH B . K 5 HOH 19 219 13 HOH HOH B . K 5 HOH 20 220 14 HOH HOH B . K 5 HOH 21 221 43 HOH HOH B . K 5 HOH 22 222 34 HOH HOH B . K 5 HOH 23 223 12 HOH HOH B . K 5 HOH 24 224 53 HOH HOH B . K 5 HOH 25 225 11 HOH HOH B . K 5 HOH 26 226 51 HOH HOH B . K 5 HOH 27 227 19 HOH HOH B . K 5 HOH 28 228 67 HOH HOH B . K 5 HOH 29 229 61 HOH HOH B . K 5 HOH 30 230 26 HOH HOH B . K 5 HOH 31 231 59 HOH HOH B . K 5 HOH 32 232 77 HOH HOH B . K 5 HOH 33 233 16 HOH HOH B . K 5 HOH 34 234 87 HOH HOH B . K 5 HOH 35 235 89 HOH HOH B . K 5 HOH 36 236 60 HOH HOH B . K 5 HOH 37 237 82 HOH HOH B . K 5 HOH 38 238 95 HOH HOH B . K 5 HOH 39 239 66 HOH HOH B . K 5 HOH 40 240 70 HOH HOH B . K 5 HOH 41 241 54 HOH HOH B . K 5 HOH 42 242 86 HOH HOH B . K 5 HOH 43 243 46 HOH HOH B . K 5 HOH 44 244 69 HOH HOH B . K 5 HOH 45 245 23 HOH HOH B . K 5 HOH 46 246 71 HOH HOH B . K 5 HOH 47 247 49 HOH HOH B . K 5 HOH 48 248 90 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2520 ? 1 MORE -0 ? 1 'SSA (A^2)' 5190 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 247 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 70.0 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 98.7 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 75.3 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 67.9 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 120.0 ? 6 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 71.2 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 101.5 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 162.8 ? 9 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 121.6 ? 10 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 67.2 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 163.7 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 122.0 ? 13 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 75.8 ? 14 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 95.8 ? 15 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 69.8 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 118.6 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.8 ? 18 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 121.9 ? 19 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 161.4 ? 20 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 94.3 ? 21 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 76.6 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 65.7 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 97.0 ? 24 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 164.4 ? 25 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 102.3 ? 26 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 65.8 ? 27 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 119.5 ? 28 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.2 ? 29 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 68.7 ? 30 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.7 ? 31 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 88.2 ? 32 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 89.5 ? 33 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 151.1 ? 34 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 69.5 ? 35 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 105.2 ? 36 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 67.8 ? 37 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 149.3 ? 38 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 139.0 ? 39 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 69.3 ? 40 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 106.7 ? 41 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 138.9 ? 42 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 81.4 ? 43 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 69.2 ? 44 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 149.4 ? 45 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 138.6 ? 46 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 108.0 ? 47 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 68.4 ? 48 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 81.4 ? 49 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 86.1 ? 50 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 140.0 ? 51 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 82.9 ? 52 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 69.4 ? 53 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 104.8 ? 54 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 88.3 ? 55 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 148.7 ? 56 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 68.7 ? 57 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 78.1 ? 58 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 67.4 ? 59 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 87.4 ? 60 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 137.5 ? 61 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 72.7 ? 62 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 80.9 ? 63 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 102.3 ? 64 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 151.5 ? 65 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 67.2 ? 66 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 89.9 ? 67 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 151.2 ? 68 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 114.7 ? 69 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 135.4 ? 70 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 70.8 ? 71 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 78.7 ? 72 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 66.8 ? 73 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 134.9 ? 74 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 103.4 ? 75 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 151.6 ? 76 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 67.1 ? 77 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 88.0 ? 78 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 88.9 ? 79 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 71.7 ? 80 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 151.5 ? 81 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 109.8 ? 82 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 136.6 ? 83 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 72.5 ? 84 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 79.9 ? 85 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 66.4 ? 86 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 101.0 ? 87 O6 ? A DG 13 ? A DG 13 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 65.7 ? 88 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 64.6 ? 89 O6 ? A DG 13 ? A DG 13 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 99.6 ? 90 O6 ? B DG 10 ? B DG 10 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 66.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-02-26 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.value' 10 2 'Structure model' '_struct_conn.conn_type_id' 11 2 'Structure model' '_struct_conn.id' 12 2 'Structure model' '_struct_conn.pdbx_dist_value' 13 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 2 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.19 108.30 3.89 0.30 N 2 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.16 108.30 1.86 0.30 N 3 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 103.63 108.00 -4.37 0.70 N 4 1 "O4'" B DG 7 ? ? "C1'" B DG 7 ? ? N9 B DG 7 ? ? 112.40 108.30 4.10 0.30 N # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 247 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.05 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BRU N1 N N N 1 BRU C2 C N N 2 BRU N3 N N N 3 BRU C4 C N N 4 BRU C5 C N N 5 BRU C6 C N N 6 BRU O2 O N N 7 BRU O4 O N N 8 BRU BR BR N N 9 BRU "C1'" C N R 10 BRU "C2'" C N N 11 BRU "C3'" C N S 12 BRU "C4'" C N R 13 BRU "O3'" O N N 14 BRU "O4'" O N N 15 BRU "C5'" C N N 16 BRU "O5'" O N N 17 BRU P P N N 18 BRU OP1 O N N 19 BRU OP2 O N N 20 BRU OP3 O N N 21 BRU HN3 H N N 22 BRU H6 H N N 23 BRU "H1'" H N N 24 BRU "H2'" H N N 25 BRU "H2''" H N N 26 BRU "H3'" H N N 27 BRU "H4'" H N N 28 BRU "HO3'" H N N 29 BRU "H5'" H N N 30 BRU "H5''" H N N 31 BRU HOP2 H N N 32 BRU HOP3 H N N 33 DA OP3 O N N 34 DA P P N N 35 DA OP1 O N N 36 DA OP2 O N N 37 DA "O5'" O N N 38 DA "C5'" C N N 39 DA "C4'" C N R 40 DA "O4'" O N N 41 DA "C3'" C N S 42 DA "O3'" O N N 43 DA "C2'" C N N 44 DA "C1'" C N R 45 DA N9 N Y N 46 DA C8 C Y N 47 DA N7 N Y N 48 DA C5 C Y N 49 DA C6 C Y N 50 DA N6 N N N 51 DA N1 N Y N 52 DA C2 C Y N 53 DA N3 N Y N 54 DA C4 C Y N 55 DA HOP3 H N N 56 DA HOP2 H N N 57 DA "H5'" H N N 58 DA "H5''" H N N 59 DA "H4'" H N N 60 DA "H3'" H N N 61 DA "HO3'" H N N 62 DA "H2'" H N N 63 DA "H2''" H N N 64 DA "H1'" H N N 65 DA H8 H N N 66 DA H61 H N N 67 DA H62 H N N 68 DA H2 H N N 69 DC OP3 O N N 70 DC P P N N 71 DC OP1 O N N 72 DC OP2 O N N 73 DC "O5'" O N N 74 DC "C5'" C N N 75 DC "C4'" C N R 76 DC "O4'" O N N 77 DC "C3'" C N S 78 DC "O3'" O N N 79 DC "C2'" C N N 80 DC "C1'" C N R 81 DC N1 N N N 82 DC C2 C N N 83 DC O2 O N N 84 DC N3 N N N 85 DC C4 C N N 86 DC N4 N N N 87 DC C5 C N N 88 DC C6 C N N 89 DC HOP3 H N N 90 DC HOP2 H N N 91 DC "H5'" H N N 92 DC "H5''" H N N 93 DC "H4'" H N N 94 DC "H3'" H N N 95 DC "HO3'" H N N 96 DC "H2'" H N N 97 DC "H2''" H N N 98 DC "H1'" H N N 99 DC H41 H N N 100 DC H42 H N N 101 DC H5 H N N 102 DC H6 H N N 103 DG OP3 O N N 104 DG P P N N 105 DG OP1 O N N 106 DG OP2 O N N 107 DG "O5'" O N N 108 DG "C5'" C N N 109 DG "C4'" C N R 110 DG "O4'" O N N 111 DG "C3'" C N S 112 DG "O3'" O N N 113 DG "C2'" C N N 114 DG "C1'" C N R 115 DG N9 N Y N 116 DG C8 C Y N 117 DG N7 N Y N 118 DG C5 C Y N 119 DG C6 C N N 120 DG O6 O N N 121 DG N1 N N N 122 DG C2 C N N 123 DG N2 N N N 124 DG N3 N N N 125 DG C4 C Y N 126 DG HOP3 H N N 127 DG HOP2 H N N 128 DG "H5'" H N N 129 DG "H5''" H N N 130 DG "H4'" H N N 131 DG "H3'" H N N 132 DG "HO3'" H N N 133 DG "H2'" H N N 134 DG "H2''" H N N 135 DG "H1'" H N N 136 DG H8 H N N 137 DG H1 H N N 138 DG H21 H N N 139 DG H22 H N N 140 HOH O O N N 141 HOH H1 H N N 142 HOH H2 H N N 143 K K K N N 144 NA NA NA N N 145 NCO CO CO N N 146 NCO N1 N N N 147 NCO N2 N N N 148 NCO N3 N N N 149 NCO N4 N N N 150 NCO N5 N N N 151 NCO N6 N N N 152 NCO HN11 H N N 153 NCO HN12 H N N 154 NCO HN13 H N N 155 NCO HN21 H N N 156 NCO HN22 H N N 157 NCO HN23 H N N 158 NCO HN31 H N N 159 NCO HN32 H N N 160 NCO HN33 H N N 161 NCO HN41 H N N 162 NCO HN42 H N N 163 NCO HN43 H N N 164 NCO HN51 H N N 165 NCO HN52 H N N 166 NCO HN53 H N N 167 NCO HN61 H N N 168 NCO HN62 H N N 169 NCO HN63 H N N 170 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BRU N1 C2 sing N N 1 BRU N1 C6 sing N N 2 BRU N1 "C1'" sing N N 3 BRU C2 N3 sing N N 4 BRU C2 O2 doub N N 5 BRU N3 C4 sing N N 6 BRU N3 HN3 sing N N 7 BRU C4 C5 sing N N 8 BRU C4 O4 doub N N 9 BRU C5 C6 doub N N 10 BRU C5 BR sing N N 11 BRU C6 H6 sing N N 12 BRU "C1'" "C2'" sing N N 13 BRU "C1'" "O4'" sing N N 14 BRU "C1'" "H1'" sing N N 15 BRU "C2'" "C3'" sing N N 16 BRU "C2'" "H2'" sing N N 17 BRU "C2'" "H2''" sing N N 18 BRU "C3'" "C4'" sing N N 19 BRU "C3'" "O3'" sing N N 20 BRU "C3'" "H3'" sing N N 21 BRU "C4'" "O4'" sing N N 22 BRU "C4'" "C5'" sing N N 23 BRU "C4'" "H4'" sing N N 24 BRU "O3'" "HO3'" sing N N 25 BRU "C5'" "O5'" sing N N 26 BRU "C5'" "H5'" sing N N 27 BRU "C5'" "H5''" sing N N 28 BRU "O5'" P sing N N 29 BRU P OP1 doub N N 30 BRU P OP2 sing N N 31 BRU P OP3 sing N N 32 BRU OP2 HOP2 sing N N 33 BRU OP3 HOP3 sing N N 34 DA OP3 P sing N N 35 DA OP3 HOP3 sing N N 36 DA P OP1 doub N N 37 DA P OP2 sing N N 38 DA P "O5'" sing N N 39 DA OP2 HOP2 sing N N 40 DA "O5'" "C5'" sing N N 41 DA "C5'" "C4'" sing N N 42 DA "C5'" "H5'" sing N N 43 DA "C5'" "H5''" sing N N 44 DA "C4'" "O4'" sing N N 45 DA "C4'" "C3'" sing N N 46 DA "C4'" "H4'" sing N N 47 DA "O4'" "C1'" sing N N 48 DA "C3'" "O3'" sing N N 49 DA "C3'" "C2'" sing N N 50 DA "C3'" "H3'" sing N N 51 DA "O3'" "HO3'" sing N N 52 DA "C2'" "C1'" sing N N 53 DA "C2'" "H2'" sing N N 54 DA "C2'" "H2''" sing N N 55 DA "C1'" N9 sing N N 56 DA "C1'" "H1'" sing N N 57 DA N9 C8 sing Y N 58 DA N9 C4 sing Y N 59 DA C8 N7 doub Y N 60 DA C8 H8 sing N N 61 DA N7 C5 sing Y N 62 DA C5 C6 sing Y N 63 DA C5 C4 doub Y N 64 DA C6 N6 sing N N 65 DA C6 N1 doub Y N 66 DA N6 H61 sing N N 67 DA N6 H62 sing N N 68 DA N1 C2 sing Y N 69 DA C2 N3 doub Y N 70 DA C2 H2 sing N N 71 DA N3 C4 sing Y N 72 DC OP3 P sing N N 73 DC OP3 HOP3 sing N N 74 DC P OP1 doub N N 75 DC P OP2 sing N N 76 DC P "O5'" sing N N 77 DC OP2 HOP2 sing N N 78 DC "O5'" "C5'" sing N N 79 DC "C5'" "C4'" sing N N 80 DC "C5'" "H5'" sing N N 81 DC "C5'" "H5''" sing N N 82 DC "C4'" "O4'" sing N N 83 DC "C4'" "C3'" sing N N 84 DC "C4'" "H4'" sing N N 85 DC "O4'" "C1'" sing N N 86 DC "C3'" "O3'" sing N N 87 DC "C3'" "C2'" sing N N 88 DC "C3'" "H3'" sing N N 89 DC "O3'" "HO3'" sing N N 90 DC "C2'" "C1'" sing N N 91 DC "C2'" "H2'" sing N N 92 DC "C2'" "H2''" sing N N 93 DC "C1'" N1 sing N N 94 DC "C1'" "H1'" sing N N 95 DC N1 C2 sing N N 96 DC N1 C6 sing N N 97 DC C2 O2 doub N N 98 DC C2 N3 sing N N 99 DC N3 C4 doub N N 100 DC C4 N4 sing N N 101 DC C4 C5 sing N N 102 DC N4 H41 sing N N 103 DC N4 H42 sing N N 104 DC C5 C6 doub N N 105 DC C5 H5 sing N N 106 DC C6 H6 sing N N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 HOH O H1 sing N N 147 HOH O H2 sing N N 148 NCO CO N1 sing N N 149 NCO CO N2 sing N N 150 NCO CO N3 sing N N 151 NCO CO N4 sing N N 152 NCO CO N5 sing N N 153 NCO CO N6 sing N N 154 NCO N1 HN11 sing N N 155 NCO N1 HN12 sing N N 156 NCO N1 HN13 sing N N 157 NCO N2 HN21 sing N N 158 NCO N2 HN22 sing N N 159 NCO N2 HN23 sing N N 160 NCO N3 HN31 sing N N 161 NCO N3 HN32 sing N N 162 NCO N3 HN33 sing N N 163 NCO N4 HN41 sing N N 164 NCO N4 HN42 sing N N 165 NCO N4 HN43 sing N N 166 NCO N5 HN51 sing N N 167 NCO N5 HN52 sing N N 168 NCO N5 HN53 sing N N 169 NCO N6 HN61 sing N N 170 NCO N6 HN62 sing N N 171 NCO N6 HN63 sing N N 172 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6JJE 'double helix' 6JJE 'z-form double helix' 6JJE 'parallel strands' 6JJE 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 5 1_555 B DC 5 1_555 -1.887 -1.266 -0.085 -3.498 -9.323 -178.871 1 A_DC5:DC5_B A 5 ? B 5 ? 15 2 1 B DG 2 1_555 B DG 6 1_555 1.797 3.363 0.002 6.381 -4.376 -87.909 2 B_DG2:DG6_B B 2 ? B 6 ? 6 3 1 A DG 7 1_555 B DG 1 1_555 -1.498 -3.474 -0.178 3.531 1.977 91.099 3 A_DG7:DG1_B A 7 ? B 1 ? 6 3 1 B DG 12 1_555 B DG 9 1_555 -1.526 -3.508 -0.022 2.311 -0.273 90.619 4 B_DG12:DG9_B B 12 ? B 9 ? 6 3 1 A DG 13 1_555 B DG 10 1_555 1.632 3.394 -0.138 3.436 3.212 -91.682 5 A_DG13:DG10_B A 13 ? B 10 ? 6 3 1 B DG 13 1_555 A DG 10 1_555 -1.653 3.389 0.109 -4.969 3.764 91.817 6 B_DG13:DG10_A B 13 ? A 10 ? 6 3 1 A DG 12 1_555 A DG 9 1_555 1.528 -3.528 -0.017 -3.361 2.309 -89.598 7 A_DG12:DG9_A A 12 ? A 9 ? 6 3 1 B DG 7 1_555 A DG 1 1_555 1.517 -3.479 0.184 -6.238 -1.510 -90.070 8 B_DG7:DG1_A B 7 ? A 1 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 5 1_555 B DC 5 1_555 B DG 2 1_555 B DG 6 1_555 -3.780 1.973 -3.021 9.417 6.714 30.789 4.676 5.021 -3.501 12.123 -17.002 32.840 1 AB_DC5DG2:DG6DC5_BB A 5 ? B 5 ? B 2 ? B 6 ? 1 B DG 2 1_555 B DG 6 1_555 A DG 7 1_555 B DG 1 1_555 -3.654 -2.774 -1.436 -44.736 -169.172 131.269 -1.518 1.862 0.182 -84.801 22.425 177.932 2 BA_DG2DG7:DG1DG6_BB B 2 ? B 6 ? A 7 ? B 1 ? 1 A DG 7 1_555 B DG 1 1_555 B DG 12 1_555 B DG 9 1_555 0.386 1.100 3.460 -2.747 -3.579 -38.126 -1.192 0.218 3.563 5.455 -4.187 -38.383 3 AB_DG7DG12:DG9DG1_BB A 7 ? B 1 ? B 12 ? B 9 ? 1 B DG 12 1_555 B DG 9 1_555 A DG 13 1_555 B DG 10 1_555 0.823 1.462 3.407 -2.197 -2.245 -53.653 -1.470 0.766 3.489 2.485 -2.431 -53.738 4 BA_DG12DG13:DG10DG9_BB B 12 ? B 9 ? A 13 ? B 10 ? 1 B DG 13 1_555 A DG 10 1_555 A DG 12 1_555 A DG 9 1_555 0.801 -1.417 3.432 -2.599 1.824 -53.251 1.456 0.717 3.508 -2.032 -2.897 -53.338 5 BA_DG13DG12:DG9DG10_AA B 13 ? A 10 ? A 12 ? A 9 ? 1 A DG 12 1_555 A DG 9 1_555 B DG 7 1_555 A DG 1 1_555 0.369 -1.079 3.363 -2.375 3.309 -38.356 1.206 0.251 3.456 -5.019 -3.603 -38.564 6 AB_DG12DG7:DG1DG9_AA A 12 ? A 9 ? B 7 ? A 1 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 31672558 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BRU ? ? BRU ? ? 'SUBJECT OF INVESTIGATION' ? 2 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? 3 NA ? ? NA ? ? 'SUBJECT OF INVESTIGATION' ? 4 NCO ? ? NCO ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'COBALT HEXAMMINE(III)' NCO 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6JJF _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details dimer #