data_6JJF # _entry.id 6JJF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JJF pdb_00006jjf 10.2210/pdb6jjf/pdb WWPDB D_1300011095 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-02-26 2 'Structure model' 1 1 2020-09-09 3 'Structure model' 1 2 2020-10-07 4 'Structure model' 1 3 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' struct_conn 4 3 'Structure model' citation 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_struct_conn.pdbx_dist_value' 11 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 3 'Structure model' '_citation.journal_volume' 26 3 'Structure model' '_citation.page_first' 27 3 'Structure model' '_citation.page_last' 28 4 'Structure model' '_database_2.pdbx_DOI' 29 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JJF _pdbx_database_status.recvd_initial_deposition_date 2019-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Y.S.' 1 0000-0002-4948-6449 'EI Omari, K.' 2 0000-0003-3506-6045 'Duman, R.' 3 0000-0002-3566-8698 'Wagner, A.' 4 0000-0001-8995-7324 'Parkinson, G.N.' 5 0000-0002-1865-9685 'Wei, D.G.' 6 0000-0001-7776-7320 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 9886 _citation.page_last 9898 _citation.title 'Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkaa439 _citation.pdbx_database_id_PubMed 32453431 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.' 1 ? primary 'El Omari, K.' 2 ? primary 'Duman, R.' 3 ? primary 'Liu, S.' 4 ? primary 'Haider, S.' 5 ? primary 'Wagner, A.' 6 ? primary 'Parkinson, G.N.' 7 ? primary 'Wei, D.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3') ; 4362.816 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 3 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 67 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DC)(DT)(DC)(DG)(DG)(DC)(DG)(DG)(DC)(DG)(DG)(DA)' _entity_poly.pdbx_seq_one_letter_code_can GGCTCGGCGGCGGA _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'COBALT HEXAMMINE(III)' NCO 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 DT n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DC n 1 9 DG n 1 10 DG n 1 11 DC n 1 12 DG n 1 13 DG n 1 14 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 14 _pdbx_entity_src_syn.organism_scientific 'Pseudorabies virus Ea' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 101947 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DC 8 8 8 DC DC A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DA 14 14 14 DA DA A . n B 1 1 DG 1 1 1 DG DG B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DC 5 5 5 DC DC B . n B 1 6 DG 6 6 6 DG DG B . n B 1 7 DG 7 7 7 DG DG B . n B 1 8 DC 8 8 8 DC DC B . n B 1 9 DG 9 9 9 DG DG B . n B 1 10 DG 10 10 10 DG DG B . n B 1 11 DC 11 11 11 DC DC B . n B 1 12 DG 12 12 12 DG DG B . n B 1 13 DG 13 13 13 DG DG B . n B 1 14 DA 14 14 14 DA DA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 3 NCO 1 104 101 NCO NCO A . G 3 NCO 1 105 102 NCO NCO A . H 4 NA 1 106 1 NA NA A . I 3 NCO 1 101 103 NCO NCO B . J 5 HOH 1 201 31 HOH HOH A . J 5 HOH 2 202 51 HOH HOH A . J 5 HOH 3 203 57 HOH HOH A . J 5 HOH 4 204 8 HOH HOH A . J 5 HOH 5 205 55 HOH HOH A . J 5 HOH 6 206 59 HOH HOH A . J 5 HOH 7 207 41 HOH HOH A . J 5 HOH 8 208 9 HOH HOH A . J 5 HOH 9 209 23 HOH HOH A . J 5 HOH 10 210 48 HOH HOH A . J 5 HOH 11 211 22 HOH HOH A . J 5 HOH 12 212 1 HOH HOH A . J 5 HOH 13 213 29 HOH HOH A . J 5 HOH 14 214 49 HOH HOH A . J 5 HOH 15 215 42 HOH HOH A . J 5 HOH 16 216 28 HOH HOH A . J 5 HOH 17 217 38 HOH HOH A . J 5 HOH 18 218 67 HOH HOH A . J 5 HOH 19 219 35 HOH HOH A . J 5 HOH 20 220 6 HOH HOH A . J 5 HOH 21 221 4 HOH HOH A . J 5 HOH 22 222 10 HOH HOH A . J 5 HOH 23 223 5 HOH HOH A . J 5 HOH 24 224 24 HOH HOH A . J 5 HOH 25 225 65 HOH HOH A . J 5 HOH 26 226 44 HOH HOH A . J 5 HOH 27 227 15 HOH HOH A . J 5 HOH 28 228 53 HOH HOH A . J 5 HOH 29 229 7 HOH HOH A . J 5 HOH 30 230 63 HOH HOH A . J 5 HOH 31 231 30 HOH HOH A . J 5 HOH 32 232 16 HOH HOH A . J 5 HOH 33 233 37 HOH HOH A . J 5 HOH 34 234 3 HOH HOH A . J 5 HOH 35 235 18 HOH HOH A . J 5 HOH 36 236 33 HOH HOH A . J 5 HOH 37 237 25 HOH HOH A . J 5 HOH 38 238 52 HOH HOH A . J 5 HOH 39 239 66 HOH HOH A . J 5 HOH 40 240 61 HOH HOH A . J 5 HOH 41 241 14 HOH HOH A . J 5 HOH 42 242 45 HOH HOH A . J 5 HOH 43 243 43 HOH HOH A . J 5 HOH 44 244 68 HOH HOH A . K 5 HOH 1 201 21 HOH HOH B . K 5 HOH 2 202 34 HOH HOH B . K 5 HOH 3 203 13 HOH HOH B . K 5 HOH 4 204 32 HOH HOH B . K 5 HOH 5 205 50 HOH HOH B . K 5 HOH 6 206 58 HOH HOH B . K 5 HOH 7 207 56 HOH HOH B . K 5 HOH 8 208 2 HOH HOH B . K 5 HOH 9 209 20 HOH HOH B . K 5 HOH 10 210 27 HOH HOH B . K 5 HOH 11 211 36 HOH HOH B . K 5 HOH 12 212 12 HOH HOH B . K 5 HOH 13 213 46 HOH HOH B . K 5 HOH 14 214 19 HOH HOH B . K 5 HOH 15 215 26 HOH HOH B . K 5 HOH 16 216 62 HOH HOH B . K 5 HOH 17 217 17 HOH HOH B . K 5 HOH 18 218 11 HOH HOH B . K 5 HOH 19 219 39 HOH HOH B . K 5 HOH 20 220 60 HOH HOH B . K 5 HOH 21 221 54 HOH HOH B . K 5 HOH 22 222 64 HOH HOH B . K 5 HOH 23 223 47 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL2Map ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 110.020 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6JJF _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.370 _cell.length_a_esd ? _cell.length_b 47.600 _cell.length_b_esd ? _cell.length_c 37.730 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JJF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.93 _exptl_crystal.description square _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Potassium cacodylate, Sodium cacodylate, Potassium chloride, Sodium chloride, Lithium chloride, Hexammine cobalt (III) chloride, MPD ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt _diffrn.pdbx_serial_crystal_experiment ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? N ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? N ? 100 ? ? 1 ? ? ? 3 ? ? ? ? ? ? N # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date _diffrn_detector.pdbx_frequency ? PIXEL 1 'DECTRIS PILATUS 12M' ? ? ? ? 2018-05-21 ? ? PIXEL 2 'DECTRIS PILATUS 12M' ? ? ? ? 2018-06-25 ? ? PIXEL 3 'DECTRIS PILATUS 12M' ? ? ? ? 2018-06-27 ? # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? ? ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? ? ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 3 ? ? ? ? ? ? ? ? 3 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5895 1.0 2 3.3509 1.0 3 . 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 1.5895 ? I23 Diamond ? ? 2 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 3.3509 ? I23 Diamond ? ? 3 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 1.5895 ? I23 Diamond # loop_ _reflns.B_iso_Wilson_estimate _reflns.entry_id _reflns.data_reduction_details _reflns.data_reduction_method _reflns.d_resolution_high _reflns.d_resolution_low _reflns.details _reflns.limit_h_max _reflns.limit_h_min _reflns.limit_k_max _reflns.limit_k_min _reflns.limit_l_max _reflns.limit_l_min _reflns.number_all _reflns.number_obs _reflns.observed_criterion _reflns.observed_criterion_F_max _reflns.observed_criterion_F_min _reflns.observed_criterion_I_max _reflns.observed_criterion_I_min _reflns.observed_criterion_sigma_F _reflns.observed_criterion_sigma_I _reflns.percent_possible_obs _reflns.R_free_details _reflns.Rmerge_F_all _reflns.Rmerge_F_obs _reflns.Friedel_coverage _reflns.number_gt _reflns.threshold_expression _reflns.pdbx_redundancy _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rmerge_I_all _reflns.pdbx_Rsym_value _reflns.pdbx_netI_over_av_sigmaI _reflns.pdbx_netI_over_sigmaI _reflns.pdbx_res_netI_over_av_sigmaI_2 _reflns.pdbx_res_netI_over_sigmaI_2 _reflns.pdbx_chi_squared _reflns.pdbx_scaling_rejects _reflns.pdbx_d_res_high_opt _reflns.pdbx_d_res_low_opt _reflns.pdbx_d_res_opt_method _reflns.phase_calculation_details _reflns.pdbx_Rrim_I_all _reflns.pdbx_Rpim_I_all _reflns.pdbx_d_opt _reflns.pdbx_number_measured_all _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.pdbx_CC_half _reflns.pdbx_CC_star _reflns.pdbx_R_split 25.090 6JJF ? ? 1.47 23.800 ? ? ? ? ? ? ? ? 12704 ? ? ? ? ? ? ? 98 ? ? ? ? ? ? 6.4 0.036 ? ? ? 17.7 ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.998 ? ? ? 6JJF ? ? 2.19 35.34 ? ? ? ? ? ? ? ? 3865 ? ? ? ? ? ? ? 98.6 ? ? ? ? ? ? 6.4 0.076 ? ? ? 36.7 ? ? ? ? ? ? ? ? ? ? ? ? 2 2 0.999 ? ? ? 6JJF ? ? 1.4 35.37 ? ? ? ? ? ? ? ? 14880 ? ? ? ? ? ? ? 99.7 ? ? ? ? ? ? 6.4 0.064 ? ? ? 26.8 ? ? ? ? ? ? ? ? ? ? ? ? 3 3 1 ? ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.47 1.52 ? 1.1 ? ? ? ? 1122 86.6 ? ? ? ? 0.513 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.644 ? ? 2.19 2.26 ? 11.4 ? ? ? ? 286 86.4 ? ? ? ? 0.163 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 2 0.975 ? ? 1.4 1.42 ? 1 ? ? ? ? 1480 ? ? ? ? ? 2.179 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 3 0.668 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 91.760 _refine.B_iso_mean 33.7619 _refine.B_iso_min 19.850 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6JJF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4700 _refine.ls_d_res_low 23.8000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12683 _refine.ls_number_reflns_R_free 610 _refine.ls_number_reflns_R_work 12073 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.0400 _refine.ls_percent_reflns_R_free 4.8100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1924 _refine.ls_R_factor_R_free 0.1992 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1921 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.8600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4700 _refine_hist.d_res_low 23.8000 _refine_hist.number_atoms_solvent 67 _refine_hist.number_atoms_total 672 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 28 _refine_hist.pdbx_B_iso_mean_ligand 50.68 _refine_hist.pdbx_B_iso_mean_solvent 39.21 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 580 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4700 1.6179 . . 121 2917 94.0000 . . . 0.3471 0.0000 0.2829 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6179 1.8520 . . 156 3023 99.0000 . . . 0.2591 0.0000 0.2065 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8520 2.3330 . . 179 3043 100.0000 . . . 0.2218 0.0000 0.2147 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3330 23.8 . . 154 3090 99.0000 . . . 0.1736 0.0000 0.1772 . . . . . . . . . . . # _struct.entry_id 6JJF _struct.title 'Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JJF _struct_keywords.text 'G-quadruplex, two-quartet, mixed-parallel/antiparallel, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 3 ? J N N 5 ? K N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6JJF _struct_ref.pdbx_db_accession 6JJF _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JJF A 1 ? 14 ? 6JJF 1 ? 14 ? 1 14 2 1 6JJF B 1 ? 14 ? 6JJF 1 ? 14 ? 1 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1570 ? 1 MORE -5 ? 1 'SSA (A^2)' 5270 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details dimer # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 C K . K ? ? A DG 1 A K 101 1_555 ? ? ? ? ? ? ? 2.853 ? ? metalc2 metalc ? ? A DG 1 O6 ? ? ? 1_555 D K . K ? ? A DG 1 A K 102 1_555 ? ? ? ? ? ? ? 2.831 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 101 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc4 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 2.661 ? ? metalc5 metalc ? ? A DG 7 O6 ? ? ? 1_555 C K . K ? ? A DG 7 A K 101 1_555 ? ? ? ? ? ? ? 2.881 ? ? metalc6 metalc ? ? A DG 7 O6 ? ? ? 1_555 D K . K ? ? A DG 7 A K 102 1_555 ? ? ? ? ? ? ? 2.818 ? ? metalc7 metalc ? ? A DG 9 O6 ? ? ? 1_555 D K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 2.816 ? ? metalc8 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 103 1_555 ? ? ? ? ? ? ? 2.899 ? ? metalc9 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 103 1_555 ? ? ? ? ? ? ? 2.870 ? ? metalc10 metalc ? ? A DG 10 O6 ? ? ? 1_555 H NA . NA ? ? A DG 10 A NA 106 1_555 ? ? ? ? ? ? ? 3.046 ? ? metalc11 metalc ? ? A DG 12 O6 ? ? ? 1_555 D K . K ? ? A DG 12 A K 102 1_555 ? ? ? ? ? ? ? 2.801 ? ? metalc12 metalc ? ? A DG 12 O6 ? ? ? 1_555 E K . K ? ? A DG 12 A K 103 1_555 ? ? ? ? ? ? ? 2.834 ? ? metalc13 metalc ? ? A DG 13 O6 ? ? ? 1_555 E K . K ? ? A DG 13 A K 103 1_555 ? ? ? ? ? ? ? 2.829 ? ? metalc14 metalc ? ? A DG 13 O6 ? ? ? 1_555 H NA . NA ? ? A DG 13 A NA 106 1_555 ? ? ? ? ? ? ? 2.837 ? ? metalc15 metalc ? ? C K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 101 B DG 1 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc16 metalc ? ? C K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 101 B DG 2 1_555 ? ? ? ? ? ? ? 2.731 ? ? metalc17 metalc ? ? C K . K ? ? ? 1_555 B DG 6 O6 ? ? A K 101 B DG 6 1_555 ? ? ? ? ? ? ? 2.656 ? ? metalc18 metalc ? ? C K . K ? ? ? 1_555 B DG 7 O6 ? ? A K 101 B DG 7 1_555 ? ? ? ? ? ? ? 2.926 ? ? metalc19 metalc ? ? D K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 102 B DG 1 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc20 metalc ? ? D K . K ? ? ? 1_555 B DG 7 O6 ? ? A K 102 B DG 7 1_555 ? ? ? ? ? ? ? 2.792 ? ? metalc21 metalc ? ? D K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 102 B DG 9 1_555 ? ? ? ? ? ? ? 2.798 ? ? metalc22 metalc ? ? D K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 102 B DG 12 1_555 ? ? ? ? ? ? ? 2.792 ? ? metalc23 metalc ? ? E K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 103 B DG 9 1_555 ? ? ? ? ? ? ? 2.926 ? ? metalc24 metalc ? ? E K . K ? ? ? 1_555 B DG 10 O6 ? ? A K 103 B DG 10 1_555 ? ? ? ? ? ? ? 2.885 ? ? metalc25 metalc ? ? E K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 103 B DG 12 1_555 ? ? ? ? ? ? ? 2.859 ? ? metalc26 metalc ? ? E K . K ? ? ? 1_555 B DG 13 O6 ? ? A K 103 B DG 13 1_555 ? ? ? ? ? ? ? 2.765 ? ? metalc27 metalc ? ? H NA . NA ? ? ? 1_555 B DG 10 O6 ? ? A NA 106 B DG 10 1_555 ? ? ? ? ? ? ? 3.022 ? ? metalc28 metalc ? ? H NA . NA ? ? ? 1_555 B DG 13 O6 ? ? A NA 106 B DG 13 1_555 ? ? ? ? ? ? ? 2.976 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 7 N2 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 7 N1 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DG 7 O6 ? ? A DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DG 7 N7 ? ? A DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 B DG 6 N2 ? ? A DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DG 6 N1 ? ? A DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DC 5 O2 ? ? A DC 5 B DC 5 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DC 5 N4 ? ? A DC 5 B DC 5 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog11 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DG 2 O6 ? ? A DG 6 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 2 N7 ? ? A DG 6 B DG 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 7 N7 ? ? ? 1_555 B DG 1 N2 ? ? A DG 7 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DG 1 N1 ? ? A DG 7 B DG 1 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 9 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N7 ? ? ? 1_555 B DG 12 N2 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DG 12 N1 ? ? A DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 10 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 10 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 13 N2 ? ? A DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 13 N1 ? ? A DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DG 9 O6 ? ? A DG 12 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DG 9 N7 ? ? A DG 12 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 13 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 13 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B DG 1 N7 ? ? ? 1_555 B DG 7 N2 ? ? B DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DG 7 N1 ? ? B DG 1 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B DG 2 N1 ? ? ? 1_555 B DG 6 O6 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG 6 N7 ? ? B DG 2 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B DG 9 N1 ? ? ? 1_555 B DG 12 O6 ? ? B DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B DG 9 N2 ? ? ? 1_555 B DG 12 N7 ? ? B DG 9 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DG 10 N1 ? ? ? 1_555 B DG 13 O6 ? ? B DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 10 N2 ? ? ? 1_555 B DG 13 N7 ? ? B DG 10 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 69.1 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 98.4 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 75.5 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 67.8 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 120.6 ? 6 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 72.5 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 102.7 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 163.0 ? 9 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 121.2 ? 10 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 66.4 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 164.0 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 122.0 ? 13 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 75.4 ? 14 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 96.2 ? 15 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 69.5 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 119.0 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.6 ? 18 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 121.0 ? 19 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 161.0 ? 20 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 94.6 ? 21 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 76.3 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 66.1 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 96.2 ? 24 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 164.4 ? 25 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 101.6 ? 26 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 66.8 ? 27 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 120.0 ? 28 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.6 ? 29 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 69.0 ? 30 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 81.8 ? 31 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 87.1 ? 32 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 88.7 ? 33 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 149.9 ? 34 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 69.5 ? 35 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 104.5 ? 36 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 67.9 ? 37 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 148.9 ? 38 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 1 ? B DG 1 ? 1_555 139.8 ? 39 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 68.2 ? 40 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 106.7 ? 41 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 138.5 ? 42 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 81.5 ? 43 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 7 ? B DG 7 ? 1_555 69.3 ? 44 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 149.0 ? 45 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 138.5 ? 46 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 109.0 ? 47 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 69.5 ? 48 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 81.4 ? 49 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 86.5 ? 50 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 139.5 ? 51 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 81.3 ? 52 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 69.4 ? 53 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 106.3 ? 54 O6 ? B DG 1 ? B DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 88.1 ? 55 O6 ? B DG 7 ? B DG 7 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 149.8 ? 56 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 70.1 ? 57 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 78.5 ? 58 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 67.9 ? 59 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 88.1 ? 60 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 137.3 ? 61 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 71.5 ? 62 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 81.1 ? 63 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 103.4 ? 64 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 151.5 ? 65 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 67.2 ? 66 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 90.1 ? 67 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 152.1 ? 68 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 112.2 ? 69 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 135.5 ? 70 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 69.7 ? 71 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 79.6 ? 72 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 67.4 ? 73 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 135.6 ? 74 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 103.6 ? 75 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 151.9 ? 76 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 67.4 ? 77 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 12 ? B DG 12 ? 1_555 89.1 ? 78 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 88.7 ? 79 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 69.6 ? 80 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 150.7 ? 81 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 107.9 ? 82 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 138.4 ? 83 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 72.6 ? 84 O6 ? B DG 12 ? B DG 12 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 81.7 ? 85 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 68.9 ? 86 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 103.9 ? 87 O6 ? A DG 13 ? A DG 13 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 67.7 ? 88 O6 ? A DG 10 ? A DG 10 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 64.5 ? 89 O6 ? A DG 13 ? A DG 13 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 102.1 ? 90 O6 ? B DG 10 ? B DG 10 ? 1_555 NA ? H NA . ? A NA 106 ? 1_555 O6 ? B DG 13 ? B DG 13 ? 1_555 67.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 101 ? 9 'binding site for residue K A 101' AC2 Software A K 102 ? 10 'binding site for residue K A 102' AC3 Software A K 103 ? 10 'binding site for residue K A 103' AC4 Software A NCO 104 ? 5 'binding site for residue NCO A 104' AC5 Software A NCO 105 ? 7 'binding site for residue NCO A 105' AC6 Software A NA 106 ? 9 'binding site for residue NA A 106' AC7 Software B NCO 101 ? 5 'binding site for residue NCO B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 1 ? DG A 1 . ? 1_555 ? 2 AC1 9 DG A 2 ? DG A 2 . ? 1_555 ? 3 AC1 9 DG A 6 ? DG A 6 . ? 1_555 ? 4 AC1 9 DG A 7 ? DG A 7 . ? 1_555 ? 5 AC1 9 K D . ? K A 102 . ? 1_555 ? 6 AC1 9 DG B 1 ? DG B 1 . ? 1_555 ? 7 AC1 9 DG B 2 ? DG B 2 . ? 1_555 ? 8 AC1 9 DG B 6 ? DG B 6 . ? 1_555 ? 9 AC1 9 DG B 7 ? DG B 7 . ? 1_555 ? 10 AC2 10 DG A 1 ? DG A 1 . ? 1_555 ? 11 AC2 10 DG A 7 ? DG A 7 . ? 1_555 ? 12 AC2 10 DG A 9 ? DG A 9 . ? 1_555 ? 13 AC2 10 DG A 12 ? DG A 12 . ? 1_555 ? 14 AC2 10 K C . ? K A 101 . ? 1_555 ? 15 AC2 10 K E . ? K A 103 . ? 1_555 ? 16 AC2 10 DG B 1 ? DG B 1 . ? 1_555 ? 17 AC2 10 DG B 7 ? DG B 7 . ? 1_555 ? 18 AC2 10 DG B 9 ? DG B 9 . ? 1_555 ? 19 AC2 10 DG B 12 ? DG B 12 . ? 1_555 ? 20 AC3 10 DG A 9 ? DG A 9 . ? 1_555 ? 21 AC3 10 DG A 10 ? DG A 10 . ? 1_555 ? 22 AC3 10 DG A 12 ? DG A 12 . ? 1_555 ? 23 AC3 10 DG A 13 ? DG A 13 . ? 1_555 ? 24 AC3 10 K D . ? K A 102 . ? 1_555 ? 25 AC3 10 NA H . ? NA A 106 . ? 1_555 ? 26 AC3 10 DG B 9 ? DG B 9 . ? 1_555 ? 27 AC3 10 DG B 10 ? DG B 10 . ? 1_555 ? 28 AC3 10 DG B 12 ? DG B 12 . ? 1_555 ? 29 AC3 10 DG B 13 ? DG B 13 . ? 1_555 ? 30 AC4 5 DC A 11 ? DC A 11 . ? 2_555 ? 31 AC4 5 DA A 14 ? DA A 14 . ? 1_555 ? 32 AC4 5 HOH J . ? HOH A 203 . ? 1_555 ? 33 AC4 5 HOH J . ? HOH A 204 . ? 1_555 ? 34 AC4 5 DG B 2 ? DG B 2 . ? 4_455 ? 35 AC5 7 DC A 3 ? DC A 3 . ? 2_554 ? 36 AC5 7 DT A 4 ? DT A 4 . ? 2_554 ? 37 AC5 7 DA A 14 ? DA A 14 . ? 2_555 ? 38 AC5 7 HOH J . ? HOH A 214 . ? 1_555 ? 39 AC5 7 HOH J . ? HOH A 218 . ? 1_555 ? 40 AC5 7 DC B 8 ? DC B 8 . ? 2_555 ? 41 AC5 7 DC B 11 ? DC B 11 . ? 3_555 ? 42 AC6 9 DG A 10 ? DG A 10 . ? 1_555 ? 43 AC6 9 DG A 13 ? DG A 13 . ? 1_555 ? 44 AC6 9 DA A 14 ? DA A 14 . ? 1_555 ? 45 AC6 9 DA A 14 ? DA A 14 . ? 2_555 ? 46 AC6 9 K E . ? K A 103 . ? 1_555 ? 47 AC6 9 DG B 10 ? DG B 10 . ? 1_555 ? 48 AC6 9 DG B 13 ? DG B 13 . ? 1_555 ? 49 AC6 9 DA B 14 ? DA B 14 . ? 1_555 ? 50 AC6 9 DA B 14 ? DA B 14 . ? 2_555 ? 51 AC7 5 DG B 7 ? DG B 7 . ? 3_545 ? 52 AC7 5 DC B 11 ? DC B 11 . ? 2_555 ? 53 AC7 5 DA B 14 ? DA B 14 . ? 1_555 ? 54 AC7 5 HOH K . ? HOH B 203 . ? 1_555 ? 55 AC7 5 HOH K . ? HOH B 205 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.86 108.30 2.56 0.30 N 2 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 113.59 108.30 5.29 0.30 N 3 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.23 108.30 1.93 0.30 N 4 1 "O4'" B DG 7 ? ? "C1'" B DG 7 ? ? N9 B DG 7 ? ? 112.95 108.30 4.65 0.30 N 5 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.12 108.30 1.82 0.30 N # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -3.6030 _pdbx_refine_tls.origin_y -7.6468 _pdbx_refine_tls.origin_z -7.6421 _pdbx_refine_tls.T[1][1] 0.2338 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0152 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0058 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2214 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0077 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2398 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.7307 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.6688 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.6631 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.4693 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.1010 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.0666 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0404 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.1328 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.1068 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0897 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0395 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0078 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0505 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0480 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0005 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? A 14 ? all 2 'X-RAY DIFFRACTION' 1 ? ? B 1 ? ? B 14 ? all 3 'X-RAY DIFFRACTION' 1 ? ? C 1 ? ? C 3 ? all 4 'X-RAY DIFFRACTION' 1 ? ? D 1 ? ? D 1 ? all 5 'X-RAY DIFFRACTION' 1 ? ? E 101 ? ? E 103 ? all 6 'X-RAY DIFFRACTION' 1 ? ? S 1 ? ? S 68 ? all # _pdbx_entry_details.entry_id 6JJF _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 244 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.53 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 K K K N N 147 NA NA NA N N 148 NCO CO CO N N 149 NCO N1 N N N 150 NCO N2 N N N 151 NCO N3 N N N 152 NCO N4 N N N 153 NCO N5 N N N 154 NCO N6 N N N 155 NCO HN11 H N N 156 NCO HN12 H N N 157 NCO HN13 H N N 158 NCO HN21 H N N 159 NCO HN22 H N N 160 NCO HN23 H N N 161 NCO HN31 H N N 162 NCO HN32 H N N 163 NCO HN33 H N N 164 NCO HN41 H N N 165 NCO HN42 H N N 166 NCO HN43 H N N 167 NCO HN51 H N N 168 NCO HN52 H N N 169 NCO HN53 H N N 170 NCO HN61 H N N 171 NCO HN62 H N N 172 NCO HN63 H N N 173 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 NCO CO N1 sing N N 152 NCO CO N2 sing N N 153 NCO CO N3 sing N N 154 NCO CO N4 sing N N 155 NCO CO N5 sing N N 156 NCO CO N6 sing N N 157 NCO N1 HN11 sing N N 158 NCO N1 HN12 sing N N 159 NCO N1 HN13 sing N N 160 NCO N2 HN21 sing N N 161 NCO N2 HN22 sing N N 162 NCO N2 HN23 sing N N 163 NCO N3 HN31 sing N N 164 NCO N3 HN32 sing N N 165 NCO N3 HN33 sing N N 166 NCO N4 HN41 sing N N 167 NCO N4 HN42 sing N N 168 NCO N4 HN43 sing N N 169 NCO N5 HN51 sing N N 170 NCO N5 HN52 sing N N 171 NCO N5 HN53 sing N N 172 NCO N6 HN61 sing N N 173 NCO N6 HN62 sing N N 174 NCO N6 HN63 sing N N 175 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6JJF 'double helix' 6JJF 'parallel strands' 6JJF 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 5 1_555 B DC 5 1_555 -1.862 1.220 0.111 -3.189 10.961 -179.669 1 A_DC5:DC5_B A 5 ? B 5 ? 15 2 1 A DG 2 1_555 B DG 6 1_555 1.855 -3.321 -0.094 2.374 8.482 -89.497 2 A_DG2:DG6_B A 2 ? B 6 ? 6 3 1 A DG 10 1_555 B DG 13 1_555 1.643 -3.439 -0.146 5.030 -4.584 -91.831 3 A_DG10:DG13_B A 10 ? B 13 ? 6 3 1 A DG 13 1_555 B DG 10 1_555 -1.656 3.428 0.108 -2.367 4.423 91.435 4 A_DG13:DG10_B A 13 ? B 10 ? 6 3 1 B DG 12 1_555 B DG 9 1_555 1.568 -3.553 0.005 -1.734 1.964 -90.823 5 B_DG12:DG9_B B 12 ? B 9 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 5 1_555 B DC 5 1_555 A DG 2 1_555 B DG 6 1_555 -1.552 1.817 3.027 -3.328 -4.560 59.257 2.042 1.410 2.968 -4.601 3.357 59.501 1 AA_DC5DG2:DG6DC5_BB A 5 ? B 5 ? A 2 ? B 6 ? 1 A DG 10 1_555 B DG 13 1_555 A DG 13 1_555 B DG 10 1_555 -1.692 3.580 -0.013 10.027 5.302 179.667 1.790 0.846 -0.013 2.651 -5.013 179.668 2 AA_DG10DG13:DG10DG13_BB A 10 ? B 13 ? A 13 ? B 10 ? 1 A DG 13 1_555 B DG 10 1_555 B DG 12 1_555 B DG 9 1_555 0.815 -1.444 3.496 -2.385 2.985 -53.993 1.388 0.737 3.596 -3.283 -2.624 -54.117 3 AB_DG13DG12:DG9DG10_BB A 13 ? B 10 ? B 12 ? B 9 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 31672558 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 NA ? ? NA ? ? 'SUBJECT OF INVESTIGATION' ? 2 NCO ? ? NCO ? ? 'SUBJECT OF INVESTIGATION' ? 3 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 6JJF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022041 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008031 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021008 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028209 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CO K N NA O P # loop_