HEADER PLANT PROTEIN 31-MAR-19 6JQH TITLE CRYSTAL STRUCTURE OF MADA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MADA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MORUS ALBA; SOURCE 3 ORGANISM_TAXID: 3498; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS DIELS-ALDER REACTION, FAD-DEPENDENT ENZYME, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.X.DU,X.G.LEI REVDAT 3 22-NOV-23 6JQH 1 REMARK REVDAT 2 03-MAR-21 6JQH 1 JRNL REVDAT 1 08-APR-20 6JQH 0 JRNL AUTH L.GAO,C.SU,X.DU,R.WANG,S.CHEN,Y.ZHOU,C.LIU,X.LIU,R.TIAN, JRNL AUTH 2 L.ZHANG,K.XIE,S.CHEN,Q.GUO,L.GUO,Y.HANO,M.SHIMAZAKI, JRNL AUTH 3 A.MINAMI,H.OIKAWA,N.HUANG,K.N.HOUK,L.HUANG,J.DAI,X.LEI JRNL TITL FAD-DEPENDENT ENZYME-CATALYSED INTERMOLECULAR [4+2] JRNL TITL 2 CYCLOADDITION IN NATURAL PRODUCT BIOSYNTHESIS. JRNL REF NAT.CHEM. V. 12 620 2020 JRNL REFN ESSN 1755-4349 JRNL PMID 32451436 JRNL DOI 10.1038/S41557-020-0467-7 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 65780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.0516 - 5.5463 0.91 4596 145 0.2164 0.2426 REMARK 3 2 5.5463 - 4.4035 0.90 4473 139 0.1596 0.1689 REMARK 3 3 4.4035 - 3.8473 0.95 4729 149 0.1533 0.2066 REMARK 3 4 3.8473 - 3.4957 0.96 4775 150 0.1733 0.2345 REMARK 3 5 3.4957 - 3.2452 0.97 4768 149 0.1917 0.2288 REMARK 3 6 3.2452 - 3.0539 0.88 4389 138 0.1948 0.2245 REMARK 3 7 3.0539 - 2.9010 0.82 4044 127 0.1908 0.2540 REMARK 3 8 2.9010 - 2.7748 0.90 4425 137 0.1958 0.2148 REMARK 3 9 2.7748 - 2.6679 0.92 4548 143 0.1904 0.2328 REMARK 3 10 2.6679 - 2.5759 0.93 4602 144 0.1957 0.2543 REMARK 3 11 2.5759 - 2.4954 0.94 4654 146 0.1929 0.2504 REMARK 3 12 2.4954 - 2.4240 0.94 4664 146 0.2018 0.2463 REMARK 3 13 2.4240 - 2.3602 0.95 4647 146 0.2044 0.2632 REMARK 3 14 2.3602 - 2.3026 0.91 4467 140 0.2074 0.2618 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8439 REMARK 3 ANGLE : 0.996 11455 REMARK 3 CHIRALITY : 0.055 1243 REMARK 3 PLANARITY : 0.006 1446 REMARK 3 DIHEDRAL : 17.192 4943 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JQH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011297. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.61700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3VTE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M ZINC ACETATE DIHYDRATE, 0.1 M REMARK 280 SODIUM CACODYLATE TRIHYDRATE, PH 6.5, 18% PEG 8000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.69050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 45 REMARK 465 SER A 46 REMARK 465 THR A 47 REMARK 465 SER A 300 REMARK 465 THR A 301 REMARK 465 ASP A 302 REMARK 465 GLU A 303 REMARK 465 GLU A 304 REMARK 465 GLY A 305 REMARK 465 ASN A 306 REMARK 465 GLU A 307 REMARK 465 PHE A 375 REMARK 465 GLU A 376 REMARK 465 SER B 46 REMARK 465 THR B 47 REMARK 465 PHE B 375 REMARK 465 GLU B 376 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS B 116 C8M FAD B 601 1.62 REMARK 500 O HOH A 842 O HOH A 852 1.85 REMARK 500 O HOH A 773 O HOH A 847 1.85 REMARK 500 NH1 ARG A 74 O HOH A 701 1.85 REMARK 500 O LYS B 477 O HOH B 701 1.87 REMARK 500 O HOH B 927 O HOH B 968 1.93 REMARK 500 O LEU A 543 O HOH A 702 1.95 REMARK 500 O HOH A 708 O HOH A 721 1.97 REMARK 500 O HOH B 715 O HOH B 940 1.98 REMARK 500 O HOH A 814 O HOH A 872 1.99 REMARK 500 OE2 GLU A 427 O HOH A 703 1.99 REMARK 500 OE2 GLU B 497 O HOH B 702 1.99 REMARK 500 O HOH B 938 O HOH B 946 2.01 REMARK 500 ND1 HIS B 91 O HOH B 703 2.02 REMARK 500 O TYR B 418 O HOH B 704 2.03 REMARK 500 OD1 ASP B 490 O HOH B 705 2.08 REMARK 500 OD2 ASP A 208 O HOH A 704 2.09 REMARK 500 NH2 ARG B 276 O HOH B 706 2.09 REMARK 500 ND1 HIS A 31 OE2 GLU A 107 2.10 REMARK 500 OE2 GLU B 407 NE2 HIS B 460 2.10 REMARK 500 NE2 HIS B 105 O HOH B 707 2.10 REMARK 500 ND1 HIS B 31 OE1 GLU B 107 2.12 REMARK 500 ND1 HIS B 355 O HOH B 708 2.13 REMARK 500 NH1 ARG B 276 O HOH B 709 2.13 REMARK 500 O HOH B 821 O HOH B 867 2.14 REMARK 500 OE1 GLU A 261 NE2 HIS A 355 2.14 REMARK 500 O HOH B 921 O HOH B 957 2.16 REMARK 500 O HOH B 832 O HOH B 917 2.17 REMARK 500 OD1 ASP B 67 NH1 ARG B 81 2.17 REMARK 500 O HOH B 723 O HOH B 962 2.17 REMARK 500 O HOH A 878 O HOH A 885 2.18 REMARK 500 O HOH A 776 O HOH A 898 2.18 REMARK 500 O HOH A 811 O HOH A 887 2.18 REMARK 500 OE1 GLU B 261 NE2 HIS B 355 2.18 REMARK 500 O HOH A 801 O HOH A 883 2.19 REMARK 500 O ASN B 438 O HOH B 710 2.19 REMARK 500 NE ARG B 249 O HOH B 711 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 742 O HOH B 901 2455 1.80 REMARK 500 O HOH A 798 O HOH B 879 1655 1.98 REMARK 500 OE2 GLU A 342 O HOH B 705 2444 2.14 REMARK 500 O HOH A 841 O HOH B 733 1655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 32 CB GLU A 32 CG 0.133 REMARK 500 GLU A 32 CG GLU A 32 CD 0.096 REMARK 500 GLU A 107 CB GLU A 107 CG 0.154 REMARK 500 GLU A 261 CB GLU A 261 CG 0.143 REMARK 500 GLU A 261 CG GLU A 261 CD 0.105 REMARK 500 GLU B 32 CB GLU B 32 CG 0.164 REMARK 500 GLU B 32 CG GLU B 32 CD 0.115 REMARK 500 GLU B 32 CD GLU B 32 OE1 0.084 REMARK 500 GLU B 261 CB GLU B 261 CG 0.134 REMARK 500 GLU B 261 CG GLU B 261 CD 0.100 REMARK 500 GLU B 407 CG GLU B 407 CD 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 523 CB - CG - OD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 ASP A 523 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 523 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 81 59.39 -98.97 REMARK 500 SER A 113 -85.30 -103.32 REMARK 500 TYR A 123 26.56 -147.90 REMARK 500 SER A 168 147.08 -170.65 REMARK 500 ILE A 309 102.68 65.52 REMARK 500 LEU A 358 33.02 70.22 REMARK 500 ASP A 361 -48.20 63.92 REMARK 500 VAL A 367 4.15 -69.49 REMARK 500 ARG A 435 -121.91 -122.73 REMARK 500 ARG A 515 -101.49 -110.96 REMARK 500 SER B 113 -78.75 -109.02 REMARK 500 TYR B 123 23.74 -142.90 REMARK 500 ASP B 220 -169.75 -123.51 REMARK 500 ASP B 302 -152.14 -80.61 REMARK 500 GLU B 304 -166.95 -76.29 REMARK 500 GLU B 362 -39.11 133.71 REMARK 500 VAL B 363 90.95 49.42 REMARK 500 ARG B 435 -122.35 -116.57 REMARK 500 LYS B 477 -63.36 -121.57 REMARK 500 ARG B 515 -100.15 -120.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 970 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH B 971 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH B 972 DISTANCE = 8.21 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 601 DBREF 6JQH A 30 546 PDB 6JQH 6JQH 30 546 DBREF 6JQH B 30 546 PDB 6JQH 6JQH 30 546 SEQRES 1 A 517 THR HIS GLU ALA PHE LEU GLU CYS LEU THR THR ARG ILE SEQRES 2 A 517 PRO SER ASN SER THR PHE THR PRO GLN SER ILE ILE TYR SEQRES 3 A 517 THR PRO ASP ASN PRO SER TYR SER THR ILE LEU ASP SER SEQRES 4 A 517 THR THR GLN ASN PRO ARG PHE LEU SER SER SER THR ARG SEQRES 5 A 517 ASN PRO PHE ALA ILE ILE THR PRO LEU HIS ALA SER HIS SEQRES 6 A 517 ILE GLN ALA ALA LEU TYR CYS SER GLN LYS HIS GLY GLU SEQRES 7 A 517 GLN MET ARG ILE ARG SER GLY GLY HIS ASP TYR GLU GLY SEQRES 8 A 517 LEU SER TYR GLN SER SER VAL PRO PHE PHE ILE LEU ASP SEQRES 9 A 517 LEU ARG ASN LEU SER SER ILE SER ILE ASP ALA LYS SER SEQRES 10 A 517 LYS SER ALA TRP VAL GLN ALA GLY ALA THR ILE GLY GLU SEQRES 11 A 517 LEU TYR TYR GLY ILE ALA LYS THR SER LEU ASN LEU SER SEQRES 12 A 517 PHE PRO GLY GLY VAL ALA HIS THR ILE GLY VAL GLY GLY SEQRES 13 A 517 GLN LEU GLY GLY GLY GLY TYR GLY TYR SER THR ARG LYS SEQRES 14 A 517 TYR GLY LEU ALA SER ASP ASN VAL ILE ASP ALA GLN LEU SEQRES 15 A 517 ILE ASP ALA ARG GLY ARG ILE LEU ASP ARG LYS THR MET SEQRES 16 A 517 GLY GLU ASP LEU PHE TRP ALA ILE ARG GLY GLY GLY ALA SEQRES 17 A 517 GLY SER PHE GLY ILE VAL LEU ALA TRP LYS ILE ARG LEU SEQRES 18 A 517 VAL ASN THR PRO SER THR VAL THR ILE PHE GLU ALA VAL SEQRES 19 A 517 ARG SER TRP GLU ASN ASN THR THR LYS LYS PHE ILE ARG SEQRES 20 A 517 ARG TYR GLN ARG ARG ALA SER LYS THR ASP LYS ASP LEU SEQRES 21 A 517 THR ILE PHE VAL GLY PHE ARG THR THR SER SER THR ASP SEQRES 22 A 517 GLU GLU GLY ASN GLU ARG ILE SER ILE LEU THR ILE VAL SEQRES 23 A 517 SER ALA THR PHE HIS GLY SER LYS ASP ARG LEU LEU GLN SEQRES 24 A 517 LEU VAL GLN LYS GLU PHE PRO ASP LEU GLY LEU VAL SER SEQRES 25 A 517 GLU GLU CYS THR GLU MET SER TRP VAL ARG SER ILE ILE SEQRES 26 A 517 HIS PHE ASN LEU PHE GLY ASP GLU VAL PRO LEU GLU VAL SEQRES 27 A 517 LEU LEU ASN ARG THR LEU ASN PHE GLU MET LYS ALA PHE SEQRES 28 A 517 LYS LEU ARG SER ASP TYR VAL GLN LYS PRO ILE PRO ASP SEQRES 29 A 517 ASP VAL LEU GLU LYS LEU LEU SER LYS LEU TYR ASP GLU SEQRES 30 A 517 GLU THR GLY GLU GLY TYR ILE GLU PHE PHE PRO TYR GLY SEQRES 31 A 517 GLY LYS MET SER LYS ILE SER GLU SER GLU ILE PRO PHE SEQRES 32 A 517 PRO TYR ARG ALA GLY ASN LEU TYR ASN LEU ARG TYR MET SEQRES 33 A 517 VAL SER TRP LYS ASP ASP GLY ASN ILE THR ARG THR ASN SEQRES 34 A 517 MET HIS LEU SER TRP ILE LYS ASP ALA TYR ASP TYR MET SEQRES 35 A 517 THR PRO TYR VAL SER LYS ASP PRO ARG GLY ALA TYR LEU SEQRES 36 A 517 ASN PHE ARG ASP LEU ASP ILE GLY VAL ASN VAL ASN GLU SEQRES 37 A 517 SER ASP TYR ASP TYR VAL ALA LYS ALA SER VAL TRP GLY SEQRES 38 A 517 THR LYS TYR PHE ARG ASN ASN PHE TYR ARG LEU VAL ASP SEQRES 39 A 517 ILE LYS THR ILE VAL ASP PRO THR ASN PHE PHE LYS TYR SEQRES 40 A 517 GLU GLN SER ILE PRO PRO LEU PRO PRO LEU SEQRES 1 B 517 THR HIS GLU ALA PHE LEU GLU CYS LEU THR THR ARG ILE SEQRES 2 B 517 PRO SER ASN SER THR PHE THR PRO GLN SER ILE ILE TYR SEQRES 3 B 517 THR PRO ASP ASN PRO SER TYR SER THR ILE LEU ASP SER SEQRES 4 B 517 THR THR GLN ASN PRO ARG PHE LEU SER SER SER THR ARG SEQRES 5 B 517 ASN PRO PHE ALA ILE ILE THR PRO LEU HIS ALA SER HIS SEQRES 6 B 517 ILE GLN ALA ALA LEU TYR CYS SER GLN LYS HIS GLY GLU SEQRES 7 B 517 GLN MET ARG ILE ARG SER GLY GLY HIS ASP TYR GLU GLY SEQRES 8 B 517 LEU SER TYR GLN SER SER VAL PRO PHE PHE ILE LEU ASP SEQRES 9 B 517 LEU ARG ASN LEU SER SER ILE SER ILE ASP ALA LYS SER SEQRES 10 B 517 LYS SER ALA TRP VAL GLN ALA GLY ALA THR ILE GLY GLU SEQRES 11 B 517 LEU TYR TYR GLY ILE ALA LYS THR SER LEU ASN LEU SER SEQRES 12 B 517 PHE PRO GLY GLY VAL ALA HIS THR ILE GLY VAL GLY GLY SEQRES 13 B 517 GLN LEU GLY GLY GLY GLY TYR GLY TYR SER THR ARG LYS SEQRES 14 B 517 TYR GLY LEU ALA SER ASP ASN VAL ILE ASP ALA GLN LEU SEQRES 15 B 517 ILE ASP ALA ARG GLY ARG ILE LEU ASP ARG LYS THR MET SEQRES 16 B 517 GLY GLU ASP LEU PHE TRP ALA ILE ARG GLY GLY GLY ALA SEQRES 17 B 517 GLY SER PHE GLY ILE VAL LEU ALA TRP LYS ILE ARG LEU SEQRES 18 B 517 VAL ASN THR PRO SER THR VAL THR ILE PHE GLU ALA VAL SEQRES 19 B 517 ARG SER TRP GLU ASN ASN THR THR LYS LYS PHE ILE ARG SEQRES 20 B 517 ARG TYR GLN ARG ARG ALA SER LYS THR ASP LYS ASP LEU SEQRES 21 B 517 THR ILE PHE VAL GLY PHE ARG THR THR SER SER THR ASP SEQRES 22 B 517 GLU GLU GLY ASN GLU ARG ILE SER ILE LEU THR ILE VAL SEQRES 23 B 517 SER ALA THR PHE HIS GLY SER LYS ASP ARG LEU LEU GLN SEQRES 24 B 517 LEU VAL GLN LYS GLU PHE PRO ASP LEU GLY LEU VAL SER SEQRES 25 B 517 GLU GLU CYS THR GLU MET SER TRP VAL ARG SER ILE ILE SEQRES 26 B 517 HIS PHE ASN LEU PHE GLY ASP GLU VAL PRO LEU GLU VAL SEQRES 27 B 517 LEU LEU ASN ARG THR LEU ASN PHE GLU MET LYS ALA PHE SEQRES 28 B 517 LYS LEU ARG SER ASP TYR VAL GLN LYS PRO ILE PRO ASP SEQRES 29 B 517 ASP VAL LEU GLU LYS LEU LEU SER LYS LEU TYR ASP GLU SEQRES 30 B 517 GLU THR GLY GLU GLY TYR ILE GLU PHE PHE PRO TYR GLY SEQRES 31 B 517 GLY LYS MET SER LYS ILE SER GLU SER GLU ILE PRO PHE SEQRES 32 B 517 PRO TYR ARG ALA GLY ASN LEU TYR ASN LEU ARG TYR MET SEQRES 33 B 517 VAL SER TRP LYS ASP ASP GLY ASN ILE THR ARG THR ASN SEQRES 34 B 517 MET HIS LEU SER TRP ILE LYS ASP ALA TYR ASP TYR MET SEQRES 35 B 517 THR PRO TYR VAL SER LYS ASP PRO ARG GLY ALA TYR LEU SEQRES 36 B 517 ASN PHE ARG ASP LEU ASP ILE GLY VAL ASN VAL ASN GLU SEQRES 37 B 517 SER ASP TYR ASP TYR VAL ALA LYS ALA SER VAL TRP GLY SEQRES 38 B 517 THR LYS TYR PHE ARG ASN ASN PHE TYR ARG LEU VAL ASP SEQRES 39 B 517 ILE LYS THR ILE VAL ASP PRO THR ASN PHE PHE LYS TYR SEQRES 40 B 517 GLU GLN SER ILE PRO PRO LEU PRO PRO LEU HET FAD A 601 53 HET FAD B 601 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 5 HOH *473(H2 O) HELIX 1 AA1 HIS A 31 ILE A 42 1 12 HELIX 2 AA2 THR A 49 SER A 52 5 4 HELIX 3 AA3 PRO A 60 THR A 69 1 10 HELIX 4 AA4 ASN A 72 LEU A 76 5 5 HELIX 5 AA5 HIS A 91 HIS A 105 1 15 HELIX 6 AA6 THR A 156 LYS A 166 1 11 HELIX 7 AA7 GLY A 182 GLY A 188 1 7 HELIX 8 AA8 SER A 195 GLY A 200 1 6 HELIX 9 AA9 LEU A 201 ASP A 204 5 4 HELIX 10 AB1 ASP A 220 GLY A 225 1 6 HELIX 11 AB2 GLY A 225 ILE A 232 1 8 HELIX 12 AB3 GLY A 236 PHE A 240 5 5 HELIX 13 AB4 ASN A 268 ALA A 282 1 15 HELIX 14 AB5 SER A 322 PHE A 334 1 13 HELIX 15 AB6 PRO A 335 GLY A 338 5 4 HELIX 16 AB7 VAL A 340 GLU A 342 5 3 HELIX 17 AB8 SER A 348 ASN A 357 1 10 HELIX 18 AB9 LEU A 365 ARG A 371 5 7 HELIX 19 AC1 PRO A 392 LYS A 402 1 11 HELIX 20 AC2 LEU A 403 GLU A 406 5 4 HELIX 21 AC3 GLY A 419 ILE A 425 5 7 HELIX 22 AC4 ASN A 453 THR A 472 1 20 HELIX 23 AC5 PRO A 473 VAL A 475 5 3 HELIX 24 AC6 ASP A 488 GLY A 492 5 5 HELIX 25 AC7 ASP A 501 PHE A 514 1 14 HELIX 26 AC8 ASN A 516 ASP A 529 1 14 HELIX 27 AC9 HIS B 31 ILE B 42 1 12 HELIX 28 AD1 THR B 49 SER B 52 5 4 HELIX 29 AD2 SER B 61 THR B 69 1 9 HELIX 30 AD3 ASN B 72 LEU B 76 5 5 HELIX 31 AD4 HIS B 91 HIS B 105 1 15 HELIX 32 AD5 THR B 156 SER B 168 1 13 HELIX 33 AD6 GLY B 182 GLY B 190 1 9 HELIX 34 AD7 SER B 195 GLY B 200 1 6 HELIX 35 AD8 LEU B 201 ASP B 204 5 4 HELIX 36 AD9 ASP B 220 ARG B 233 1 14 HELIX 37 AE1 GLY B 236 PHE B 240 5 5 HELIX 38 AE2 ASN B 268 ALA B 282 1 15 HELIX 39 AE3 SER B 322 PHE B 334 1 13 HELIX 40 AE4 PRO B 335 GLY B 338 5 4 HELIX 41 AE5 VAL B 340 GLU B 342 5 3 HELIX 42 AE6 SER B 348 ASN B 357 1 10 HELIX 43 AE7 LEU B 365 ARG B 371 5 7 HELIX 44 AE8 PRO B 392 LYS B 402 1 11 HELIX 45 AE9 LEU B 403 GLU B 406 5 4 HELIX 46 AF1 GLY B 419 ILE B 425 5 7 HELIX 47 AF2 ASN B 453 MET B 471 1 19 HELIX 48 AF3 THR B 472 VAL B 475 5 4 HELIX 49 AF4 ASP B 488 GLY B 492 5 5 HELIX 50 AF5 ASP B 501 PHE B 514 1 14 HELIX 51 AF6 ASN B 516 ASP B 529 1 14 SHEET 1 AA1 4 ILE A 54 TYR A 55 0 SHEET 2 AA1 4 ALA A 85 ILE A 87 -1 O ILE A 86 N TYR A 55 SHEET 3 AA1 4 PHE A 129 ASP A 133 1 O ASP A 133 N ILE A 87 SHEET 4 AA1 4 GLN A 108 ARG A 112 1 N ARG A 110 O LEU A 132 SHEET 1 AA2 5 ILE A 140 ASP A 143 0 SHEET 2 AA2 5 SER A 148 GLN A 152 -1 O SER A 148 N ASP A 143 SHEET 3 AA2 5 ILE A 242 ARG A 249 -1 O TRP A 246 N VAL A 151 SHEET 4 AA2 5 VAL A 206 ILE A 212 -1 N GLN A 210 O LEU A 244 SHEET 5 AA2 5 ILE A 218 LEU A 219 -1 O LEU A 219 N LEU A 211 SHEET 1 AA3 2 LEU A 171 SER A 172 0 SHEET 2 AA3 2 VAL A 251 ASN A 252 -1 O VAL A 251 N SER A 172 SHEET 1 AA4 7 CYS A 344 MET A 347 0 SHEET 2 AA4 7 VAL A 257 SER A 265 -1 N VAL A 257 O MET A 347 SHEET 3 AA4 7 SER A 310 PHE A 319 -1 O VAL A 315 N ALA A 262 SHEET 4 AA4 7 LEU A 289 THR A 298 -1 N GLY A 294 O ILE A 314 SHEET 5 AA4 7 GLY A 411 PRO A 417 -1 O PHE A 415 N VAL A 293 SHEET 6 AA4 7 TYR A 440 TRP A 448 -1 O ASN A 441 N PHE A 416 SHEET 7 AA4 7 ALA A 379 VAL A 387 -1 N ASP A 385 O LEU A 442 SHEET 1 AA5 4 ILE B 54 TYR B 55 0 SHEET 2 AA5 4 ALA B 85 ILE B 87 -1 O ILE B 86 N TYR B 55 SHEET 3 AA5 4 PHE B 130 ASP B 133 1 O ILE B 131 N ILE B 87 SHEET 4 AA5 4 MET B 109 ARG B 112 1 N ARG B 110 O LEU B 132 SHEET 1 AA6 5 ILE B 140 ASP B 143 0 SHEET 2 AA6 5 SER B 148 GLN B 152 -1 O SER B 148 N ASP B 143 SHEET 3 AA6 5 ILE B 242 ARG B 249 -1 O TRP B 246 N VAL B 151 SHEET 4 AA6 5 VAL B 206 ILE B 212 -1 N GLN B 210 O LEU B 244 SHEET 5 AA6 5 ILE B 218 LEU B 219 -1 O LEU B 219 N LEU B 211 SHEET 1 AA7 2 LEU B 171 SER B 172 0 SHEET 2 AA7 2 VAL B 251 ASN B 252 -1 O VAL B 251 N SER B 172 SHEET 1 AA8 7 CYS B 344 MET B 347 0 SHEET 2 AA8 7 VAL B 257 SER B 265 -1 N VAL B 257 O MET B 347 SHEET 3 AA8 7 GLU B 307 PHE B 319 -1 O VAL B 315 N ALA B 262 SHEET 4 AA8 7 LEU B 289 THR B 301 -1 N SER B 300 O ARG B 308 SHEET 5 AA8 7 GLY B 411 PRO B 417 -1 O PHE B 415 N VAL B 293 SHEET 6 AA8 7 TYR B 440 TRP B 448 -1 O ASN B 441 N PHE B 416 SHEET 7 AA8 7 ALA B 379 VAL B 387 -1 N ASP B 385 O LEU B 442 SSBOND 1 CYS A 37 CYS A 101 1555 1555 2.09 SSBOND 2 CYS B 37 CYS B 101 1555 1555 2.09 LINK ND1 HIS A 116 C8M FAD A 601 1555 1555 1.59 CISPEP 1 ASP A 478 PRO A 479 0 2.45 CISPEP 2 ASP B 478 PRO B 479 0 6.77 SITE 1 AC1 26 ILE A 111 ARG A 112 SER A 113 GLY A 114 SITE 2 AC1 26 GLY A 115 HIS A 116 ASP A 117 TYR A 118 SITE 3 AC1 26 SER A 122 LEU A 134 ALA A 153 ALA A 178 SITE 4 AC1 26 ILE A 181 GLY A 182 GLY A 185 GLN A 186 SITE 5 AC1 26 GLY A 191 TYR A 192 GLY A 238 GLY A 241 SITE 6 AC1 26 VAL A 243 TYR A 483 ASN A 485 ARG A 487 SITE 7 AC1 26 HOH A 740 HOH A 796 SITE 1 AC2 28 ILE B 111 ARG B 112 SER B 113 GLY B 114 SITE 2 AC2 28 GLY B 115 HIS B 116 ASP B 117 TYR B 118 SITE 3 AC2 28 SER B 122 LEU B 134 ALA B 153 ALA B 178 SITE 4 AC2 28 ILE B 181 GLY B 182 GLY B 184 GLY B 185 SITE 5 AC2 28 GLN B 186 GLY B 191 TYR B 192 GLY B 238 SITE 6 AC2 28 GLY B 241 VAL B 243 TYR B 483 ASN B 485 SITE 7 AC2 28 ARG B 487 HOH B 787 HOH B 793 HOH B 875 CRYST1 74.665 115.381 95.870 90.00 96.23 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013393 0.000000 0.001462 0.00000 SCALE2 0.000000 0.008667 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010493 0.00000