HEADER REPLICATION/DNA 15-APR-19 6JUP TITLE MUTANT POLIV-DNA INCOMING NUCLEOTIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: F, A; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: DNA POLYMERASE; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'- COMPND 11 D(P*CP*TP*GP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*CP*C)-3'); COMPND 12 CHAIN: G; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: DNA TEMPLATE; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'-D(P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'); COMPND 17 CHAIN: H, B, C; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: DNA PRIMER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DINB, DBH, DINB_1, DINB_2, A8C65_11955, A9R57_12995, SOURCE 5 ACU57_05495, AML35_26730, AUQ13_19210, BANRA_02184, BANRA_03427, SOURCE 6 BET08_31995, BHS87_01175, BJJ90_21040, BMT91_15875, BUE81_28425, SOURCE 7 C5N07_13800, C9E25_22940, CA593_02435, CRM83_14635, CV83915_01335, SOURCE 8 CWS33_23695, D0X26_15110, D2185_22400, D3O91_23685, D3Y67_06560, SOURCE 9 D9D20_20085, D9D69_23735, D9E22_12045, D9F57_19765, D9H66_20200, SOURCE 10 D9H68_19465, D9I18_13635, D9J11_18290, D9J11_27145, D9J44_21795, SOURCE 11 DNQ41_05075, DTL43_23485, EAI44_14085, EAI52_15440, EC1094V2_3597, SOURCE 12 EC3234A_186C00130, EC3426_01008, EC382_20155, EC382_27145, SOURCE 13 ECTO6_03825, EEP23_17825, EFV02_01800, EFV04_12320, EFV12_23405, SOURCE 14 EFV17_17010, ERS085365_04420, ERS139211_04423, ERS150873_03537, SOURCE 15 HW43_04975, NCTC10865_04963, NCTC11022_04998, NCTC11126_03759, SOURCE 16 NCTC13148_06847, NCTC13462_02133, NCTC8985_02971, NCTC9037_04075, SOURCE 17 NCTC9045_04586, NCTC9058_02901, NCTC9062_04328, NCTC9073_03243, SOURCE 18 NCTC9117_04957, NCTC9706_01202, RK56_027425, SAMEA3472043_03017, SOURCE 19 SAMEA3472047_03125, SAMEA3472070_01946, SAMEA3484427_04943, SOURCE 20 SAMEA3484429_04916, SAMEA3752557_00095, SAMEA3752559_04620, SOURCE 21 SAMEA3753300_00345, SK85_00262, WQ89_22460, WR15_21380; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 MOL_ID: 2; SOURCE 25 SYNTHETIC: YES; SOURCE 26 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 27 ORGANISM_TAXID: 562; SOURCE 28 MOL_ID: 3; SOURCE 29 SYNTHETIC: YES; SOURCE 30 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 31 ORGANISM_TAXID: 562 KEYWDS DNA POLYMERASE, REPLICATION, REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,M.K.JOHNSON REVDAT 3 22-NOV-23 6JUP 1 LINK REVDAT 2 26-FEB-20 6JUP 1 REMARK REVDAT 1 19-FEB-20 6JUP 0 JRNL AUTH M.K.JOHNSON,J.KOTTUR,D.T.NAIR JRNL TITL A POLAR FILTER IN DNA POLYMERASES PREVENTS RIBONUCLEOTIDE JRNL TITL 2 INCORPORATION. JRNL REF NUCLEIC ACIDS RES. V. 47 10693 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31544946 JRNL DOI 10.1093/NAR/GKZ792 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1788 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2436 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.3610 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5378 REMARK 3 NUCLEIC ACID ATOMS : 1351 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.87000 REMARK 3 B22 (A**2) : -2.81000 REMARK 3 B33 (A**2) : 4.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.311 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.653 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7053 ; 0.017 ; 0.017 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9787 ; 1.183 ; 1.791 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 682 ; 7.405 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 244 ;33.658 ;22.459 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 980 ;19.535 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;23.320 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1034 ; 0.042 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4815 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2734 ; 0.984 ; 8.751 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3414 ; 1.669 ;13.121 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4319 ; 1.393 ; 9.147 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 11180 ; 3.704 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7053 ; 6.359 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 20 ; 0.000 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6794 ;43.067 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 115.5555 38.4445 -40.0799 REMARK 3 T TENSOR REMARK 3 T11: 0.1607 T22: 0.0744 REMARK 3 T33: 0.0876 T12: 0.0435 REMARK 3 T13: 0.0665 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 2.3579 L22: 1.8290 REMARK 3 L33: 3.5285 L12: -0.9385 REMARK 3 L13: 1.2457 L23: -0.6123 REMARK 3 S TENSOR REMARK 3 S11: 0.1608 S12: 0.1055 S13: -0.0894 REMARK 3 S21: 0.0268 S22: -0.0534 S23: 0.1668 REMARK 3 S31: -0.3927 S32: -0.1365 S33: -0.1074 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 10 REMARK 3 RESIDUE RANGE : A 75 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 116.5523 21.7592 -58.1522 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.1526 REMARK 3 T33: 0.0107 T12: -0.0908 REMARK 3 T13: 0.0273 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 3.3276 L22: 0.9049 REMARK 3 L33: 0.2589 L12: -0.2394 REMARK 3 L13: -0.5479 L23: 0.0912 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.1059 S13: -0.0977 REMARK 3 S21: 0.0162 S22: 0.0134 S23: -0.0151 REMARK 3 S31: 0.1413 S32: -0.1667 S33: 0.0251 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 137.5984 18.1783 -50.2371 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.0526 REMARK 3 T33: 0.1231 T12: 0.0102 REMARK 3 T13: 0.0373 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.0588 L22: 0.3196 REMARK 3 L33: 1.4675 L12: -0.3471 REMARK 3 L13: -0.4123 L23: -0.2438 REMARK 3 S TENSOR REMARK 3 S11: 0.0792 S12: 0.0433 S13: -0.0639 REMARK 3 S21: -0.0213 S22: -0.0822 S23: -0.1076 REMARK 3 S31: 0.0987 S32: 0.2016 S33: 0.0030 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 341 REMARK 3 ORIGIN FOR THE GROUP (A): 117.7269 14.3648 -22.1742 REMARK 3 T TENSOR REMARK 3 T11: 0.0818 T22: 0.1171 REMARK 3 T33: 0.0662 T12: -0.0263 REMARK 3 T13: 0.0448 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.5255 L22: 1.1849 REMARK 3 L33: 2.3118 L12: 0.5894 REMARK 3 L13: 0.4766 L23: 0.4563 REMARK 3 S TENSOR REMARK 3 S11: -0.0712 S12: 0.0615 S13: -0.0655 REMARK 3 S21: -0.0975 S22: -0.0297 S23: 0.1129 REMARK 3 S31: 0.1344 S32: -0.0911 S33: 0.1010 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 837 B 854 REMARK 3 RESIDUE RANGE : C 858 C 873 REMARK 3 ORIGIN FOR THE GROUP (A): 132.1906 10.0104 -31.6077 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.1204 REMARK 3 T33: 0.1241 T12: -0.0154 REMARK 3 T13: 0.0748 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.7560 L22: 1.0047 REMARK 3 L33: 0.5943 L12: -0.6618 REMARK 3 L13: 0.6482 L23: -0.5694 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.0374 S13: -0.1005 REMARK 3 S21: -0.1136 S22: 0.0325 S23: -0.0862 REMARK 3 S31: 0.0669 S32: 0.0600 S33: -0.0489 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 12 F 79 REMARK 3 ORIGIN FOR THE GROUP (A): 103.3219 32.0249 15.0394 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.1174 REMARK 3 T33: 0.2531 T12: -0.0144 REMARK 3 T13: -0.0291 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.2929 L22: 1.4260 REMARK 3 L33: 0.0151 L12: 0.4755 REMARK 3 L13: -0.0562 L23: -0.0618 REMARK 3 S TENSOR REMARK 3 S11: 0.1166 S12: 0.0632 S13: -0.0134 REMARK 3 S21: 0.2339 S22: -0.1371 S23: -0.1482 REMARK 3 S31: -0.0314 S32: -0.0233 S33: 0.0205 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 0 F 11 REMARK 3 RESIDUE RANGE : F 80 F 166 REMARK 3 ORIGIN FOR THE GROUP (A): 84.8631 15.4079 14.7687 REMARK 3 T TENSOR REMARK 3 T11: 0.0958 T22: 0.1094 REMARK 3 T33: 0.2266 T12: -0.0030 REMARK 3 T13: 0.0323 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.2778 L22: 0.6692 REMARK 3 L33: 1.2988 L12: -0.2861 REMARK 3 L13: 0.5441 L23: -0.3576 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: 0.0346 S13: 0.0359 REMARK 3 S21: 0.1788 S22: -0.0835 S23: 0.0518 REMARK 3 S31: 0.0491 S32: -0.0677 S33: 0.0894 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 167 F 230 REMARK 3 ORIGIN FOR THE GROUP (A): 89.6712 14.6879 -10.5057 REMARK 3 T TENSOR REMARK 3 T11: 0.0812 T22: 0.1203 REMARK 3 T33: 0.2063 T12: 0.0123 REMARK 3 T13: -0.0265 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 1.8015 L22: 1.9862 REMARK 3 L33: 0.1360 L12: 1.4388 REMARK 3 L13: 0.2986 L23: -0.0146 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: -0.0123 S13: -0.0575 REMARK 3 S21: -0.1906 S22: -0.0162 S23: -0.0398 REMARK 3 S31: 0.0200 S32: 0.0102 S33: 0.0469 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 231 F 341 REMARK 3 ORIGIN FOR THE GROUP (A): 120.6433 9.9149 9.3477 REMARK 3 T TENSOR REMARK 3 T11: 0.0337 T22: 0.1356 REMARK 3 T33: 0.1791 T12: 0.0092 REMARK 3 T13: -0.0107 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.7880 L22: 1.1474 REMARK 3 L33: 0.4282 L12: 0.2969 REMARK 3 L13: -0.6259 L23: 0.0222 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0358 S13: 0.2239 REMARK 3 S21: 0.0369 S22: 0.0471 S23: 0.0372 REMARK 3 S31: 0.0762 S32: 0.0605 S33: -0.0229 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 838 G 855 REMARK 3 RESIDUE RANGE : H 860 H 873 REMARK 3 ORIGIN FOR THE GROUP (A): 109.2003 4.0533 -2.5281 REMARK 3 T TENSOR REMARK 3 T11: 0.0514 T22: 0.1236 REMARK 3 T33: 0.1531 T12: 0.0067 REMARK 3 T13: 0.0010 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.1570 L22: 1.8041 REMARK 3 L33: 0.8219 L12: -0.3938 REMARK 3 L13: -0.6441 L23: 1.0978 REMARK 3 S TENSOR REMARK 3 S11: -0.0814 S12: 0.0855 S13: -0.0230 REMARK 3 S21: 0.0007 S22: 0.0482 S23: 0.0390 REMARK 3 S31: 0.0326 S32: 0.0045 S33: 0.0332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011776. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0723 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40567 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 69.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.75500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IRC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD 2%, SODIUM PHOSPHATE BUFFER PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.48700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DG H 859 REMARK 465 DT C 856 REMARK 465 DC C 857 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER F 83 O LEU F 102 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC G 838 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 PRO A 158 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER F 1 111.54 4.19 REMARK 500 CYS F 11 50.24 38.39 REMARK 500 LEU F 69 116.94 -37.87 REMARK 500 SER F 101 -160.83 -167.18 REMARK 500 ASP F 111 49.20 -109.17 REMARK 500 HIS F 114 -80.71 -83.32 REMARK 500 HIS F 116 -138.29 42.41 REMARK 500 ASP F 230 84.05 -155.23 REMARK 500 PHE F 295 -0.87 64.59 REMARK 500 LEU F 307 106.27 -43.00 REMARK 500 SER A 101 -144.93 -160.56 REMARK 500 ASP A 111 52.63 -94.90 REMARK 500 VAL A 113 70.18 -102.87 REMARK 500 HIS A 116 28.73 47.92 REMARK 500 GLN A 128 -171.87 -69.48 REMARK 500 THR A 129 -61.15 69.73 REMARK 500 VAL A 145 -163.71 -123.69 REMARK 500 ASN A 156 47.76 -100.98 REMARK 500 LYS A 157 -136.89 -20.78 REMARK 500 PRO A 158 76.08 -16.91 REMARK 500 ASN A 159 64.84 77.45 REMARK 500 GLU A 231 5.47 -68.73 REMARK 500 VAL A 277 -20.53 71.04 REMARK 500 LYS A 278 62.38 -174.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 MET F 9 O 93.4 REMARK 620 3 ASP F 103 OD2 80.0 104.0 REMARK 620 4 0KX F 401 O1G 98.8 99.9 156.2 REMARK 620 5 0KX F 401 O2B 173.5 92.5 101.2 77.5 REMARK 620 6 0KX F 401 O2A 92.8 173.3 79.4 76.9 81.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 8 OD1 REMARK 620 2 ASP F 8 OD2 48.5 REMARK 620 3 ASP F 103 OD1 105.9 139.7 REMARK 620 4 ASP F 103 OD2 64.8 113.1 51.8 REMARK 620 5 GLU F 104 OE1 111.2 69.1 104.2 147.6 REMARK 620 6 0KX F 401 O2A 72.2 88.6 114.9 73.2 138.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 MET A 9 O 89.6 REMARK 620 3 ASP A 103 OD2 73.9 96.0 REMARK 620 4 0KX A 401 O1G 103.0 97.8 165.8 REMARK 620 5 0KX A 401 O2B 177.5 92.0 104.1 78.6 REMARK 620 6 0KX A 401 O1A 95.8 173.5 89.0 77.4 82.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 8 OD2 54.3 REMARK 620 3 ASP A 103 OD1 102.2 152.2 REMARK 620 4 ASP A 103 OD2 55.5 109.4 52.3 REMARK 620 5 GLU A 104 OE1 122.4 69.1 127.4 175.8 REMARK 620 6 0KX A 401 O1A 75.9 85.5 104.3 71.5 112.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX F 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 DBREF 6JUP F 2 341 UNP W8STT9 W8STT9_ECOLX 2 341 DBREF 6JUP G 838 855 PDB 6JUP 6JUP 838 855 DBREF 6JUP H 856 873 PDB 6JUP 6JUP 856 873 DBREF 6JUP A 2 341 UNP W8STT9 W8STT9_ECOLX 2 341 DBREF 6JUP B 837 854 PDB 6JUP 6JUP 837 854 DBREF 6JUP C 856 873 PDB 6JUP 6JUP 856 873 SEQADV 6JUP GLY F 0 UNP W8STT9 EXPRESSION TAG SEQADV 6JUP SER F 1 UNP W8STT9 EXPRESSION TAG SEQADV 6JUP ALA F 13 UNP W8STT9 PHE 13 ENGINEERED MUTATION SEQADV 6JUP CYS F 43 UNP W8STT9 THR 43 ENGINEERED MUTATION SEQADV 6JUP GLY A 0 UNP W8STT9 EXPRESSION TAG SEQADV 6JUP SER A 1 UNP W8STT9 EXPRESSION TAG SEQADV 6JUP ALA A 13 UNP W8STT9 PHE 13 ENGINEERED MUTATION SEQADV 6JUP CYS A 43 UNP W8STT9 THR 43 ENGINEERED MUTATION SEQRES 1 F 342 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 F 342 ALA ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 F 342 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 F 342 GLY VAL ILE SER CYS ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 F 342 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 F 342 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 F 342 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 F 342 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 F 342 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 F 342 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 F 342 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 F 342 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 F 342 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 F 342 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 F 342 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 F 342 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 F 342 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 F 342 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 F 342 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 F 342 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 F 342 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 F 342 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 F 342 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 F 342 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 F 342 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 F 342 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 F 342 LEU LEU ASP PRO SEQRES 1 G 18 DC DT DG DG DG DG DT DC DC DT DA DG DG SEQRES 2 G 18 DA DC DC DC DC SEQRES 1 H 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 H 18 DG DA DC DC DC SEQRES 1 A 342 GLY SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE SEQRES 2 A 342 ALA ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG SEQRES 3 A 342 ASP ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG SEQRES 4 A 342 GLY VAL ILE SER CYS ALA ASN TYR PRO ALA ARG LYS PHE SEQRES 5 A 342 GLY VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS SEQRES 6 A 342 LEU CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP SEQRES 7 A 342 ALA TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SEQRES 8 A 342 SER ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP SEQRES 9 A 342 GLU ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS SEQRES 10 A 342 GLY SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR SEQRES 11 A 342 ILE PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL SEQRES 12 A 342 ALA PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET SEQRES 13 A 342 ASN LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU SEQRES 14 A 342 VAL PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE SEQRES 15 A 342 PRO GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA SEQRES 16 A 342 MET GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP SEQRES 17 A 342 LEU VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG SEQRES 18 A 342 ILE LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP SEQRES 19 A 342 VAL ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU SEQRES 20 A 342 ARG THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS SEQRES 21 A 342 GLU ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG SEQRES 22 A 342 ARG LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG SEQRES 23 A 342 GLN GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR SEQRES 24 A 342 THR GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP SEQRES 25 A 342 LEU ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG SEQRES 26 A 342 GLY GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR SEQRES 27 A 342 LEU LEU ASP PRO SEQRES 1 B 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 C 18 DG DA DC DC DC HET 0KX F 401 28 HET MG F 402 1 HET MG F 403 1 HET 0KX A 401 28 HET MG A 402 1 HET MG A 403 1 HETNAM 0KX 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 0KX PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE HETNAM MG MAGNESIUM ION FORMUL 7 0KX 2(C9 H17 N4 O12 P3) FORMUL 8 MG 4(MG 2+) FORMUL 13 HOH *40(H2 O) HELIX 1 AA1 CYS F 11 ASN F 21 1 11 HELIX 2 AA2 PRO F 22 ARG F 25 5 4 HELIX 3 AA3 ASN F 45 LYS F 50 1 6 HELIX 4 AA4 PRO F 58 CYS F 66 1 9 HELIX 5 AA5 ARG F 75 SER F 91 1 17 HELIX 6 AA6 SER F 118 GLN F 135 1 18 HELIX 7 AA7 VAL F 145 ASN F 156 1 12 HELIX 8 AA8 THR F 165 ALA F 167 5 3 HELIX 9 AA9 GLU F 168 LEU F 176 1 9 HELIX 10 AB1 PRO F 177 ILE F 181 5 5 HELIX 11 AB2 GLY F 185 MET F 195 1 11 HELIX 12 AB3 THR F 199 LYS F 205 1 7 HELIX 13 AB4 ASP F 207 GLY F 216 1 10 HELIX 14 AB5 GLY F 216 GLN F 227 1 12 HELIX 15 AB6 HIS F 255 LYS F 278 1 24 HELIX 16 AB7 ASN F 308 ARG F 323 1 16 HELIX 17 AB8 CYS A 11 ASN A 21 1 11 HELIX 18 AB9 PRO A 22 ARG A 25 5 4 HELIX 19 AC1 ASN A 45 PHE A 51 1 7 HELIX 20 AC2 THR A 59 CYS A 66 1 8 HELIX 21 AC3 ARG A 75 ARG A 92 1 18 HELIX 22 AC4 SER A 118 GLN A 135 1 18 HELIX 23 AC5 VAL A 145 ASN A 156 1 12 HELIX 24 AC6 GLU A 168 THR A 175 1 8 HELIX 25 AC7 PRO A 177 ILE A 181 5 5 HELIX 26 AC8 GLY A 185 MET A 195 1 11 HELIX 27 AC9 THR A 199 LYS A 205 1 7 HELIX 28 AD1 ASP A 207 GLY A 216 1 10 HELIX 29 AD2 GLY A 216 GLN A 227 1 12 HELIX 30 AD3 HIS A 255 LYS A 276 1 22 HELIX 31 AD4 ASN A 308 ARG A 323 1 16 SHEET 1 AA1 5 ILE F 97 PRO F 99 0 SHEET 2 AA1 5 GLU F 104 ASP F 108 -1 O TYR F 106 N GLU F 98 SHEET 3 AA1 5 ILE F 4 MET F 9 -1 N ILE F 5 O LEU F 107 SHEET 4 AA1 5 ALA F 138 ALA F 143 -1 O ALA F 143 N ILE F 4 SHEET 5 AA1 5 GLN F 161 VAL F 163 1 O PHE F 162 N VAL F 142 SHEET 1 AA2 3 CYS F 43 ALA F 44 0 SHEET 2 AA2 3 ILE F 29 ILE F 31 -1 N ILE F 31 O CYS F 43 SHEET 3 AA2 3 THR F 70 LEU F 72 1 O LEU F 72 N ALA F 30 SHEET 1 AA3 4 SER F 242 ILE F 253 0 SHEET 2 AA3 4 VAL F 329 THR F 337 -1 O LEU F 334 N VAL F 245 SHEET 3 AA3 4 ARG F 285 PHE F 292 -1 N ARG F 285 O THR F 337 SHEET 4 AA3 4 GLN F 297 VAL F 303 -1 O GLN F 300 N VAL F 288 SHEET 1 AA4 5 ILE A 97 PRO A 99 0 SHEET 2 AA4 5 GLU A 104 ASP A 108 -1 O TYR A 106 N GLU A 98 SHEET 3 AA4 5 ILE A 4 MET A 9 -1 N ILE A 5 O LEU A 107 SHEET 4 AA4 5 ALA A 138 ALA A 143 -1 O SER A 139 N ASP A 8 SHEET 5 AA4 5 GLN A 161 VAL A 163 1 O PHE A 162 N VAL A 142 SHEET 1 AA5 4 MET A 57 PRO A 58 0 SHEET 2 AA5 4 VAL A 40 ALA A 44 -1 N ILE A 41 O MET A 57 SHEET 3 AA5 4 ILE A 29 GLY A 32 -1 N ILE A 31 O SER A 42 SHEET 4 AA5 4 THR A 70 LEU A 72 1 O LEU A 72 N GLY A 32 SHEET 1 AA6 4 SER A 242 ILE A 253 0 SHEET 2 AA6 4 VAL A 329 THR A 337 -1 O VAL A 336 N VAL A 243 SHEET 3 AA6 4 ARG A 285 PHE A 292 -1 N GLY A 287 O HIS A 335 SHEET 4 AA6 4 GLN A 297 VAL A 303 -1 O THR A 298 N LEU A 290 LINK OD1 ASP F 8 MG MG F 402 1555 1555 1.97 LINK OD1 ASP F 8 MG MG F 403 1555 1555 2.73 LINK OD2 ASP F 8 MG MG F 403 1555 1555 2.59 LINK O MET F 9 MG MG F 402 1555 1555 2.00 LINK OD2 ASP F 103 MG MG F 402 1555 1555 2.33 LINK OD1 ASP F 103 MG MG F 403 1555 1555 2.55 LINK OD2 ASP F 103 MG MG F 403 1555 1555 2.43 LINK OE1 GLU F 104 MG MG F 403 1555 1555 1.89 LINK O1G 0KX F 401 MG MG F 402 1555 1555 2.28 LINK O2B 0KX F 401 MG MG F 402 1555 1555 1.70 LINK O2A 0KX F 401 MG MG F 402 1555 1555 2.31 LINK O2A 0KX F 401 MG MG F 403 1555 1555 2.54 LINK OD1 ASP A 8 MG MG A 402 1555 1555 1.90 LINK OD1 ASP A 8 MG MG A 403 1555 1555 2.48 LINK OD2 ASP A 8 MG MG A 403 1555 1555 2.32 LINK O MET A 9 MG MG A 402 1555 1555 2.07 LINK OD2 ASP A 103 MG MG A 402 1555 1555 2.03 LINK OD1 ASP A 103 MG MG A 403 1555 1555 2.34 LINK OD2 ASP A 103 MG MG A 403 1555 1555 2.59 LINK OE1 GLU A 104 MG MG A 403 1555 1555 2.11 LINK O1G 0KX A 401 MG MG A 402 1555 1555 2.24 LINK O2B 0KX A 401 MG MG A 402 1555 1555 1.82 LINK O1A 0KX A 401 MG MG A 402 1555 1555 2.09 LINK O1A 0KX A 401 MG MG A 403 1555 1555 2.34 CISPEP 1 LYS F 157 PRO F 158 0 27.51 SITE 1 AC1 16 ASP F 8 MET F 9 ASP F 10 CYS F 11 SITE 2 AC1 16 PHE F 12 ALA F 13 SER F 42 CYS F 43 SITE 3 AC1 16 ARG F 49 ALA F 56 ASP F 103 LYS F 157 SITE 4 AC1 16 MG F 402 MG F 403 DG G 840 DC H 873 SITE 1 AC2 5 ASP F 8 MET F 9 ASP F 103 0KX F 401 SITE 2 AC2 5 MG F 403 SITE 1 AC3 6 ASP F 8 ASP F 103 GLU F 104 0KX F 401 SITE 2 AC3 6 MG F 402 DC H 873 SITE 1 AC4 18 ASP A 8 MET A 9 ASP A 10 CYS A 11 SITE 2 AC4 18 PHE A 12 ALA A 13 SER A 42 CYS A 43 SITE 3 AC4 18 ARG A 49 ALA A 56 ASP A 103 GLU A 104 SITE 4 AC4 18 LYS A 157 MG A 402 MG A 403 HOH A 504 SITE 5 AC4 18 DG B 840 DC C 873 SITE 1 AC5 5 ASP A 8 MET A 9 ASP A 103 0KX A 401 SITE 2 AC5 5 MG A 403 SITE 1 AC6 6 ASP A 8 ASP A 103 GLU A 104 0KX A 401 SITE 2 AC6 6 MG A 402 DC C 873 CRYST1 86.184 56.974 111.136 90.00 92.90 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011603 0.000000 0.000588 0.00000 SCALE2 0.000000 0.017552 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009010 0.00000