HEADER HYDROLASE 10-MAY-19 6K1B TITLE CRYSTAL STRUCTURE OF EXD2 EXONUCLEASE DOMAIN SOAKED IN MN AND DGMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXONUCLEASE 3'-5' DOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: EXONUCLEASE 3'-5' DOMAIN-LIKE-CONTAINING PROTEIN 2; COMPND 5 EC: 3.1.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EXD2, C14ORF114, EXDL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS 3'-5' EXONUCLEASE, DNAQ FAMILY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.PARK,C.LEE REVDAT 3 22-NOV-23 6K1B 1 LINK REVDAT 2 04-DEC-19 6K1B 1 JRNL REVDAT 1 22-MAY-19 6K1B 0 JRNL AUTH J.PARK,S.Y.LEE,H.JEONG,M.G.KANG,L.VAN HAUTE,M.MINCZUK, JRNL AUTH 2 J.K.SEO,Y.JUN,K.MYUNG,H.W.RHEE,C.LEE JRNL TITL THE STRUCTURE OF HUMAN EXD2 REVEALS A CHIMERIC 3' TO 5' JRNL TITL 2 EXONUCLEASE DOMAIN THAT DISCRIMINATES SUBSTRATES VIA METAL JRNL TITL 3 COORDINATION. JRNL REF NUCLEIC ACIDS RES. V. 47 7078 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31127291 JRNL DOI 10.1093/NAR/GKZ454 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 14194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8128 - 4.4499 1.00 2874 149 0.1995 0.2574 REMARK 3 2 4.4499 - 3.5340 1.00 2724 144 0.1984 0.2641 REMARK 3 3 3.5340 - 3.0879 1.00 2686 142 0.2194 0.2760 REMARK 3 4 3.0879 - 2.8058 0.99 2667 140 0.2589 0.3034 REMARK 3 5 2.8058 - 2.6049 0.95 2535 133 0.2751 0.3221 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3032 REMARK 3 ANGLE : 0.804 4110 REMARK 3 CHIRALITY : 0.030 497 REMARK 3 PLANARITY : 0.003 515 REMARK 3 DIHEDRAL : 13.613 1124 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 78 THROUGH 294) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2010 -3.8295 -28.5781 REMARK 3 T TENSOR REMARK 3 T11: 0.2683 T22: 0.1864 REMARK 3 T33: 0.3309 T12: 0.0610 REMARK 3 T13: -0.0300 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.5968 L22: -0.0947 REMARK 3 L33: 5.5369 L12: 0.5827 REMARK 3 L13: 2.4723 L23: 0.8966 REMARK 3 S TENSOR REMARK 3 S11: -0.2122 S12: -0.1912 S13: 0.1268 REMARK 3 S21: 0.1029 S22: -0.1034 S23: 0.0279 REMARK 3 S31: -0.0961 S32: -0.4130 S33: 0.2508 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 78 THROUGH 293) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4303 -3.2003 -15.5355 REMARK 3 T TENSOR REMARK 3 T11: 0.2665 T22: 0.2092 REMARK 3 T33: 0.3140 T12: 0.0230 REMARK 3 T13: -0.0045 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.9810 L22: 0.0517 REMARK 3 L33: 5.3719 L12: 0.4865 REMARK 3 L13: 1.8459 L23: 1.0005 REMARK 3 S TENSOR REMARK 3 S11: -0.1357 S12: 0.0088 S13: 0.0011 REMARK 3 S21: -0.0507 S22: -0.1248 S23: 0.0448 REMARK 3 S31: 0.1423 S32: 0.1468 S33: 0.0966 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14231 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6K17 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, 2-(N REMARK 280 -MORPHOLINO)ETHANESULFONIC ACID, CALCIUM ACETATE, DITHIOTHREITOL, REMARK 280 MANGANESE CHLORIDE, DEOXYGUANOSINE MONOPHOSPHATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.16950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.97550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.78550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.97550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.16950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.78550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 76 REMARK 465 ALA A 77 REMARK 465 LEU A 114 REMARK 465 GLU A 115 REMARK 465 GLY A 116 REMARK 465 LYS A 117 REMARK 465 LEU A 219 REMARK 465 ASP A 220 REMARK 465 LYS A 221 REMARK 465 SER A 222 REMARK 465 LEU A 223 REMARK 465 PRO A 261 REMARK 465 PHE A 262 REMARK 465 SER A 263 REMARK 465 ARG A 264 REMARK 465 ASN A 265 REMARK 465 SER A 266 REMARK 465 PRO A 267 REMARK 465 GLY A 268 REMARK 465 GLU A 269 REMARK 465 LYS A 270 REMARK 465 ASN A 271 REMARK 465 ASP A 272 REMARK 465 ASP A 273 REMARK 465 HIS A 274 REMARK 465 LYS A 295 REMARK 465 LYS B 76 REMARK 465 ALA B 77 REMARK 465 LEU B 114 REMARK 465 GLU B 115 REMARK 465 GLY B 116 REMARK 465 LYS B 117 REMARK 465 LEU B 219 REMARK 465 ASP B 220 REMARK 465 LYS B 221 REMARK 465 SER B 222 REMARK 465 LEU B 223 REMARK 465 PRO B 261 REMARK 465 PHE B 262 REMARK 465 SER B 263 REMARK 465 ARG B 264 REMARK 465 ASN B 265 REMARK 465 SER B 266 REMARK 465 PRO B 267 REMARK 465 GLY B 268 REMARK 465 GLU B 269 REMARK 465 LYS B 270 REMARK 465 ASN B 271 REMARK 465 ASP B 272 REMARK 465 ASP B 273 REMARK 465 HIS B 274 REMARK 465 SER B 275 REMARK 465 SER B 276 REMARK 465 SER B 294 REMARK 465 LYS B 295 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 284 56.40 -110.68 REMARK 500 PHE B 102 102.65 -160.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 108 OD2 REMARK 620 2 GLU A 110 OE2 116.4 REMARK 620 3 HOH A 409 O 97.2 82.6 REMARK 620 4 HOH A 433 O 73.9 167.3 88.8 REMARK 620 5 ASP B 246 OD2 90.8 88.4 169.9 99.3 REMARK 620 6 HOH B 422 O 157.1 84.4 74.9 84.3 99.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 108 OD1 REMARK 620 2 HOH A 402 O 69.8 REMARK 620 3 HOH A 409 O 74.8 137.0 REMARK 620 4 HOH A 412 O 66.0 65.1 78.8 REMARK 620 5 HOH A 457 O 125.0 132.1 56.6 80.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 246 OD2 REMARK 620 2 HOH A 414 O 95.9 REMARK 620 3 ASP B 108 OD2 85.3 165.5 REMARK 620 4 GLU B 110 OE2 92.8 73.2 92.3 REMARK 620 5 HOH B 434 O 96.9 106.5 87.7 170.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 108 OD1 REMARK 620 2 HOH B 408 O 82.8 REMARK 620 3 HOH B 410 O 89.0 74.2 REMARK 620 4 HOH B 434 O 89.2 162.8 90.6 REMARK 620 5 HOH B 444 O 155.9 88.9 66.9 92.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 301 DBREF 6K1B A 76 295 UNP Q9NVH0 EXD2_HUMAN 76 295 DBREF 6K1B B 76 295 UNP Q9NVH0 EXD2_HUMAN 76 295 SEQRES 1 A 220 LYS ALA LYS VAL VAL THR VAL SER GLN GLU ALA GLU TRP SEQRES 2 A 220 ASP GLN ILE GLU PRO LEU LEU ARG SER GLU LEU GLU ASP SEQRES 3 A 220 PHE PRO VAL LEU GLY ILE ASP CYS GLU TRP VAL ASN LEU SEQRES 4 A 220 GLU GLY LYS ALA SER PRO LEU SER LEU LEU GLN MET ALA SEQRES 5 A 220 SER PRO SER GLY LEU CYS VAL LEU VAL ARG LEU PRO LYS SEQRES 6 A 220 LEU ILE CYS GLY GLY LYS THR LEU PRO ARG THR LEU LEU SEQRES 7 A 220 ASP ILE LEU ALA ASP GLY THR ILE LEU LYS VAL GLY VAL SEQRES 8 A 220 GLY CYS SER GLU ASP ALA SER LYS LEU LEU GLN ASP TYR SEQRES 9 A 220 GLY LEU VAL VAL ARG GLY CYS LEU ASP LEU ARG TYR LEU SEQRES 10 A 220 ALA MET ARG GLN ARG ASN ASN LEU LEU CYS ASN GLY LEU SEQRES 11 A 220 SER LEU LYS SER LEU ALA GLU THR VAL LEU ASN PHE PRO SEQRES 12 A 220 LEU ASP LYS SER LEU LEU LEU ARG CYS SER ASN TRP ASP SEQRES 13 A 220 ALA GLU THR LEU THR GLU ASP GLN VAL ILE TYR ALA ALA SEQRES 14 A 220 ARG ASP ALA GLN ILE SER VAL ALA LEU PHE LEU HIS LEU SEQRES 15 A 220 LEU GLY TYR PRO PHE SER ARG ASN SER PRO GLY GLU LYS SEQRES 16 A 220 ASN ASP ASP HIS SER SER TRP ARG LYS VAL LEU GLU LYS SEQRES 17 A 220 CYS GLN GLY VAL VAL ASP ILE PRO PHE ARG SER LYS SEQRES 1 B 220 LYS ALA LYS VAL VAL THR VAL SER GLN GLU ALA GLU TRP SEQRES 2 B 220 ASP GLN ILE GLU PRO LEU LEU ARG SER GLU LEU GLU ASP SEQRES 3 B 220 PHE PRO VAL LEU GLY ILE ASP CYS GLU TRP VAL ASN LEU SEQRES 4 B 220 GLU GLY LYS ALA SER PRO LEU SER LEU LEU GLN MET ALA SEQRES 5 B 220 SER PRO SER GLY LEU CYS VAL LEU VAL ARG LEU PRO LYS SEQRES 6 B 220 LEU ILE CYS GLY GLY LYS THR LEU PRO ARG THR LEU LEU SEQRES 7 B 220 ASP ILE LEU ALA ASP GLY THR ILE LEU LYS VAL GLY VAL SEQRES 8 B 220 GLY CYS SER GLU ASP ALA SER LYS LEU LEU GLN ASP TYR SEQRES 9 B 220 GLY LEU VAL VAL ARG GLY CYS LEU ASP LEU ARG TYR LEU SEQRES 10 B 220 ALA MET ARG GLN ARG ASN ASN LEU LEU CYS ASN GLY LEU SEQRES 11 B 220 SER LEU LYS SER LEU ALA GLU THR VAL LEU ASN PHE PRO SEQRES 12 B 220 LEU ASP LYS SER LEU LEU LEU ARG CYS SER ASN TRP ASP SEQRES 13 B 220 ALA GLU THR LEU THR GLU ASP GLN VAL ILE TYR ALA ALA SEQRES 14 B 220 ARG ASP ALA GLN ILE SER VAL ALA LEU PHE LEU HIS LEU SEQRES 15 B 220 LEU GLY TYR PRO PHE SER ARG ASN SER PRO GLY GLU LYS SEQRES 16 B 220 ASN ASP ASP HIS SER SER TRP ARG LYS VAL LEU GLU LYS SEQRES 17 B 220 CYS GLN GLY VAL VAL ASP ILE PRO PHE ARG SER LYS HET MN A 301 1 HET MN A 302 1 HET MN A 303 1 HET MN B 301 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 4(MN 2+) FORMUL 7 HOH *105(H2 O) HELIX 1 AA1 GLN A 84 GLU A 100 1 17 HELIX 2 AA2 ARG A 137 CYS A 143 1 7 HELIX 3 AA3 GLY A 144 LYS A 146 5 3 HELIX 4 AA4 PRO A 149 ASP A 158 1 10 HELIX 5 AA5 GLY A 167 GLY A 180 1 14 HELIX 6 AA6 LEU A 189 ASN A 203 1 15 HELIX 7 AA7 SER A 206 LEU A 215 1 10 HELIX 8 AA8 LEU A 224 SER A 228 5 5 HELIX 9 AA9 THR A 236 LEU A 258 1 23 HELIX 10 AB1 SER A 276 CYS A 284 1 9 HELIX 11 AB2 GLN B 84 PHE B 102 1 19 HELIX 12 AB3 ARG B 137 CYS B 143 1 7 HELIX 13 AB4 PRO B 149 ASP B 158 1 10 HELIX 14 AB5 GLY B 167 GLY B 180 1 14 HELIX 15 AB6 LEU B 189 GLY B 204 1 16 HELIX 16 AB7 SER B 206 LEU B 215 1 10 HELIX 17 AB8 LEU B 224 SER B 228 5 5 HELIX 18 AB9 THR B 236 LEU B 258 1 23 HELIX 19 AC1 ARG B 278 CYS B 284 1 7 SHEET 1 AA1 6 VAL A 79 VAL A 82 0 SHEET 2 AA1 6 CYS A 133 VAL A 136 1 O LEU A 135 N VAL A 82 SHEET 3 AA1 6 LEU A 123 ALA A 127 -1 N LEU A 124 O VAL A 136 SHEET 4 AA1 6 VAL A 104 GLU A 110 -1 N GLY A 106 O ALA A 127 SHEET 5 AA1 6 LEU A 162 GLY A 165 1 O LEU A 162 N LEU A 105 SHEET 6 AA1 6 CYS A 186 ASP A 188 1 O LEU A 187 N LYS A 163 SHEET 1 AA2 6 VAL B 79 VAL B 82 0 SHEET 2 AA2 6 CYS B 133 VAL B 136 1 O LEU B 135 N VAL B 82 SHEET 3 AA2 6 LEU B 123 ALA B 127 -1 N LEU B 124 O VAL B 136 SHEET 4 AA2 6 VAL B 104 GLU B 110 -1 N ASP B 108 O GLN B 125 SHEET 5 AA2 6 LEU B 162 GLY B 165 1 O LEU B 162 N LEU B 105 SHEET 6 AA2 6 CYS B 186 ASP B 188 1 O LEU B 187 N LYS B 163 LINK OD2 ASP A 108 MN MN A 301 1555 1555 2.50 LINK OD1 ASP A 108 MN MN A 302 1555 1555 2.67 LINK OE2 GLU A 110 MN MN A 301 1555 1555 2.41 LINK OD2 ASP A 246 MN MN A 303 1555 1555 2.50 LINK MN MN A 301 O HOH A 409 1555 1555 2.46 LINK MN MN A 301 O HOH A 433 1555 1555 2.73 LINK MN MN A 301 OD2 ASP B 246 1555 1555 2.51 LINK MN MN A 301 O HOH B 422 1555 1555 2.72 LINK MN MN A 302 O HOH A 402 1555 1555 2.49 LINK MN MN A 302 O HOH A 409 1555 1555 2.50 LINK MN MN A 302 O HOH A 412 1555 1555 2.46 LINK MN MN A 302 O HOH A 457 1555 1555 2.50 LINK MN MN A 303 O HOH A 414 1555 1555 2.61 LINK MN MN A 303 OD2 ASP B 108 1555 1555 2.37 LINK MN MN A 303 OE2 GLU B 110 1555 1555 2.39 LINK MN MN A 303 O HOH B 434 1555 1555 2.59 LINK OD1 ASP B 108 MN MN B 301 1555 1555 2.43 LINK MN MN B 301 O HOH B 408 1555 1555 2.52 LINK MN MN B 301 O HOH B 410 1555 1555 2.50 LINK MN MN B 301 O HOH B 434 1555 1555 2.76 LINK MN MN B 301 O HOH B 444 1555 1555 2.50 SITE 1 AC1 7 ASP A 108 GLU A 110 MN A 302 HOH A 409 SITE 2 AC1 7 HOH A 433 ASP B 246 HOH B 422 SITE 1 AC2 7 ASP A 108 MN A 301 HOH A 402 HOH A 409 SITE 2 AC2 7 HOH A 412 HOH A 433 HOH A 457 SITE 1 AC3 7 ASP A 246 HOH A 414 ASP B 108 GLU B 110 SITE 2 AC3 7 MN B 301 HOH B 410 HOH B 434 SITE 1 AC4 7 MN A 303 ASP B 108 HOH B 408 HOH B 410 SITE 2 AC4 7 HOH B 433 HOH B 434 HOH B 444 CRYST1 46.339 73.571 131.951 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021580 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007579 0.00000