HEADER TRANSFERASE 13-MAY-19 6K28 TITLE CRYSTAL STRUCTURE OF THE 5-(HYDROXYETHYL)-METHYLTHIAZOLE KINASE THIM TITLE 2 FROM KLEBSIELLA PNEUMONIA IN COMPLEX WITH TZE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYETHYLTHIAZOLE KINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: 4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE KINASE,THZ KINASE; COMPND 5 EC: 2.7.1.50; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: THIM, BN49_3768; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS KLEBSIELLA PNEUMONIA, 5-(HYDROXYETHYL)-METHYLTHIAZOLE KINASE, THIM, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,L.WANG,F.SHANG,J.LAN,W.LIU,Y.XU REVDAT 3 27-MAR-24 6K28 1 LINK REVDAT 2 06-MAY-20 6K28 1 JRNL REVDAT 1 10-JUL-19 6K28 0 JRNL AUTH Y.CHEN,L.WANG,F.SHANG,W.LIU,J.LAN,J.CHEN,N.C.HA,C.QUAN, JRNL AUTH 2 K.H.NAM,Y.XU JRNL TITL STRUCTURAL INSIGHT OF THE 5-(HYDROXYETHYL)-METHYLTHIAZOLE JRNL TITL 2 KINASE THIM INVOLVING VITAMIN B1 BIOSYNTHETIC PATHWAY FROM JRNL TITL 3 THE KLEBSIELLA PNEUMONIAE. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 518 513 2019 JRNL REFN ESSN 1090-2104 JRNL PMID 31439375 JRNL DOI 10.1016/J.BBRC.2019.08.086 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.520 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 63769 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.250 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1872 - 4.8196 0.92 3213 143 0.1876 0.2393 REMARK 3 2 4.8196 - 3.8275 0.97 3250 144 0.1437 0.1869 REMARK 3 3 3.8275 - 3.3442 0.99 3267 146 0.1556 0.1862 REMARK 3 4 3.3442 - 3.0387 1.00 3262 144 0.1625 0.2183 REMARK 3 5 3.0387 - 2.8211 1.00 3247 144 0.1663 0.2375 REMARK 3 6 2.8211 - 2.6548 1.00 3272 145 0.1704 0.2536 REMARK 3 7 2.6548 - 2.5219 1.00 3225 144 0.1646 0.2259 REMARK 3 8 2.5219 - 2.4122 1.00 3221 143 0.1657 0.2298 REMARK 3 9 2.4122 - 2.3193 1.00 3201 142 0.1569 0.2488 REMARK 3 10 2.3193 - 2.2393 0.99 3241 144 0.1642 0.2107 REMARK 3 11 2.2393 - 2.1693 1.00 3202 142 0.1694 0.2173 REMARK 3 12 2.1693 - 2.1073 0.99 3170 140 0.1744 0.2599 REMARK 3 13 2.1073 - 2.0519 0.99 3188 143 0.1877 0.2786 REMARK 3 14 2.0519 - 2.0018 0.95 3078 136 0.1877 0.2390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5146 REMARK 3 ANGLE : 1.313 7026 REMARK 3 CHIRALITY : 0.054 871 REMARK 3 PLANARITY : 0.006 918 REMARK 3 DIHEDRAL : 14.371 1796 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012139. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9826 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64448 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09700 REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.11400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.1 M TRIS HYDROCHLORIDE(PH 8.5), 30% W/V POLYETHYLENE GLYCOL 4, REMARK 280 000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.44700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.31550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.66500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.31550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.44700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.66500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 ASN A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 SER A 137 REMARK 465 ALA A 138 REMARK 465 GLY A 139 REMARK 465 GLY A 140 REMARK 465 ARG A 141 REMARK 465 GLY A 142 REMARK 465 VAL A 143 REMARK 465 ASP A 144 REMARK 465 THR A 145 REMARK 465 THR A 146 REMARK 465 ASP A 147 REMARK 465 VAL A 255 REMARK 465 GLN A 256 REMARK 465 GLY A 257 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 LEU B 5 REMARK 465 ASN B 6 REMARK 465 PRO B 7 REMARK 465 ALA B 8 REMARK 465 MET B 136 REMARK 465 SER B 137 REMARK 465 ALA B 138 REMARK 465 GLY B 139 REMARK 465 GLY B 140 REMARK 465 ARG B 141 REMARK 465 GLY B 142 REMARK 465 VAL B 143 REMARK 465 ASP B 144 REMARK 465 THR B 145 REMARK 465 THR B 146 REMARK 465 ASP B 147 REMARK 465 GLN B 253 REMARK 465 GLU B 254 REMARK 465 VAL B 255 REMARK 465 GLN B 256 REMARK 465 GLY B 257 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 GLU C 3 REMARK 465 LEU C 4 REMARK 465 LEU C 5 REMARK 465 ASN C 6 REMARK 465 GLY C 139 REMARK 465 GLY C 140 REMARK 465 ARG C 141 REMARK 465 GLY C 142 REMARK 465 VAL C 143 REMARK 465 ASP C 144 REMARK 465 THR C 145 REMARK 465 THR C 146 REMARK 465 ASP C 147 REMARK 465 VAL C 255 REMARK 465 GLN C 256 REMARK 465 GLY C 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ALA A 155 O HOH A 403 1.54 REMARK 500 O HOH C 439 O HOH C 466 1.85 REMARK 500 O HOH A 456 O HOH A 547 1.94 REMARK 500 O HOH A 418 O HOH A 529 2.02 REMARK 500 O HOH B 518 O HOH C 491 2.04 REMARK 500 OD2 ASP A 30 O HOH A 401 2.07 REMARK 500 O HOH A 482 O HOH A 547 2.07 REMARK 500 O HOH B 539 O HOH B 579 2.09 REMARK 500 O HOH C 429 O HOH C 535 2.10 REMARK 500 O HOH B 466 O HOH B 503 2.11 REMARK 500 O HOH C 499 O HOH C 548 2.12 REMARK 500 O HOH A 594 O HOH A 605 2.15 REMARK 500 O HOH C 507 O HOH C 513 2.15 REMARK 500 O HOH C 537 O HOH C 545 2.16 REMARK 500 O GLN A 119 O HOH A 402 2.17 REMARK 500 O HOH A 556 O HOH A 577 2.19 REMARK 500 OD1 ASP B 30 O HOH B 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 479 O HOH C 526 4456 2.15 REMARK 500 O HOH A 411 O HOH A 478 4566 2.18 REMARK 500 O HOH C 518 O HOH C 534 4456 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 59.96 37.80 REMARK 500 GLN A 119 70.31 64.17 REMARK 500 GLN B 119 65.14 63.46 REMARK 500 ASN B 189 138.79 -172.81 REMARK 500 GLN C 119 74.83 62.98 REMARK 500 GLU C 180 -55.01 -121.67 REMARK 500 ASN C 189 136.83 176.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 610 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 611 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 612 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B 600 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B 601 DISTANCE = 7.45 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 GLU A 129 OE1 114.4 REMARK 620 3 HOH A 539 O 133.5 93.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 98 OD1 REMARK 620 2 GLU B 129 OE1 118.2 REMARK 620 3 HOH B 410 O 150.6 75.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 98 OD1 REMARK 620 2 GLU C 129 OE1 115.9 REMARK 620 3 HOH C 462 O 147.5 85.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TZE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TZE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TZE C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 302 DBREF 6K28 A 1 257 UNP W9BB97 W9BB97_KLEPN 1 257 DBREF 6K28 B 1 257 UNP W9BB97 W9BB97_KLEPN 1 257 DBREF 6K28 C 1 257 UNP W9BB97 W9BB97_KLEPN 1 257 SEQRES 1 A 257 MET PRO GLU LEU LEU ASN PRO ALA PRO VAL ALA HIS LEU SEQRES 2 A 257 ARG HIS LEU LEU ARG ALA HIS SER PRO LEU VAL HIS CYS SEQRES 3 A 257 MET THR ASN ASP VAL VAL GLN THR PHE THR ALA ASN VAL SEQRES 4 A 257 LEU LEU ALA VAL GLY ALA SER PRO ALA MET VAL ILE ASP SEQRES 5 A 257 PRO ARG GLU ALA ALA GLN PHE ALA ALA ILE ALA ASP ALA SEQRES 6 A 257 LEU LEU ILE ASN VAL GLY THR LEU THR GLU ASP ARG ALA SEQRES 7 A 257 VAL ALA MET ARG ALA ALA VAL GLU HIS ALA ARG GLN ALA SEQRES 8 A 257 GLY LYS PRO TRP THR LEU ASP PRO VAL ALA VAL GLY ALA SEQRES 9 A 257 LEU THR VAL ARG THR ALA PHE CYS HIS GLU LEU LEU ALA SEQRES 10 A 257 LEU GLN PRO ALA ALA ILE ARG GLY ASN ALA SER GLU ILE SEQRES 11 A 257 LEU ALA LEU ALA GLY MET SER ALA GLY GLY ARG GLY VAL SEQRES 12 A 257 ASP THR THR ASP THR ALA ALA ALA ALA LEU PRO ALA ALA SEQRES 13 A 257 GLN ALA LEU ALA ARG ARG LEU ALA THR VAL VAL ALA VAL SEQRES 14 A 257 THR GLY GLU VAL ASP TYR VAL THR ASP GLY GLU ARG VAL SEQRES 15 A 257 LEU SER VAL ALA GLY GLY ASN PRO LEU MET THR ARG VAL SEQRES 16 A 257 VAL GLY THR GLY CYS ALA LEU SER ALA VAL VAL ALA ALA SEQRES 17 A 257 SER ALA ALA LEU PRO GLY ASP ARG LEU GLU ASN VAL ALA SEQRES 18 A 257 ALA ALA CYS GLY LEU MET LYS GLN ALA GLY GLU ILE ALA SEQRES 19 A 257 ALA ARG GLN GLY GLY PRO GLY SER PHE ILE PRO ALA PHE SEQRES 20 A 257 LEU ASP ALA LEU TYR GLN GLU VAL GLN GLY SEQRES 1 B 257 MET PRO GLU LEU LEU ASN PRO ALA PRO VAL ALA HIS LEU SEQRES 2 B 257 ARG HIS LEU LEU ARG ALA HIS SER PRO LEU VAL HIS CYS SEQRES 3 B 257 MET THR ASN ASP VAL VAL GLN THR PHE THR ALA ASN VAL SEQRES 4 B 257 LEU LEU ALA VAL GLY ALA SER PRO ALA MET VAL ILE ASP SEQRES 5 B 257 PRO ARG GLU ALA ALA GLN PHE ALA ALA ILE ALA ASP ALA SEQRES 6 B 257 LEU LEU ILE ASN VAL GLY THR LEU THR GLU ASP ARG ALA SEQRES 7 B 257 VAL ALA MET ARG ALA ALA VAL GLU HIS ALA ARG GLN ALA SEQRES 8 B 257 GLY LYS PRO TRP THR LEU ASP PRO VAL ALA VAL GLY ALA SEQRES 9 B 257 LEU THR VAL ARG THR ALA PHE CYS HIS GLU LEU LEU ALA SEQRES 10 B 257 LEU GLN PRO ALA ALA ILE ARG GLY ASN ALA SER GLU ILE SEQRES 11 B 257 LEU ALA LEU ALA GLY MET SER ALA GLY GLY ARG GLY VAL SEQRES 12 B 257 ASP THR THR ASP THR ALA ALA ALA ALA LEU PRO ALA ALA SEQRES 13 B 257 GLN ALA LEU ALA ARG ARG LEU ALA THR VAL VAL ALA VAL SEQRES 14 B 257 THR GLY GLU VAL ASP TYR VAL THR ASP GLY GLU ARG VAL SEQRES 15 B 257 LEU SER VAL ALA GLY GLY ASN PRO LEU MET THR ARG VAL SEQRES 16 B 257 VAL GLY THR GLY CYS ALA LEU SER ALA VAL VAL ALA ALA SEQRES 17 B 257 SER ALA ALA LEU PRO GLY ASP ARG LEU GLU ASN VAL ALA SEQRES 18 B 257 ALA ALA CYS GLY LEU MET LYS GLN ALA GLY GLU ILE ALA SEQRES 19 B 257 ALA ARG GLN GLY GLY PRO GLY SER PHE ILE PRO ALA PHE SEQRES 20 B 257 LEU ASP ALA LEU TYR GLN GLU VAL GLN GLY SEQRES 1 C 257 MET PRO GLU LEU LEU ASN PRO ALA PRO VAL ALA HIS LEU SEQRES 2 C 257 ARG HIS LEU LEU ARG ALA HIS SER PRO LEU VAL HIS CYS SEQRES 3 C 257 MET THR ASN ASP VAL VAL GLN THR PHE THR ALA ASN VAL SEQRES 4 C 257 LEU LEU ALA VAL GLY ALA SER PRO ALA MET VAL ILE ASP SEQRES 5 C 257 PRO ARG GLU ALA ALA GLN PHE ALA ALA ILE ALA ASP ALA SEQRES 6 C 257 LEU LEU ILE ASN VAL GLY THR LEU THR GLU ASP ARG ALA SEQRES 7 C 257 VAL ALA MET ARG ALA ALA VAL GLU HIS ALA ARG GLN ALA SEQRES 8 C 257 GLY LYS PRO TRP THR LEU ASP PRO VAL ALA VAL GLY ALA SEQRES 9 C 257 LEU THR VAL ARG THR ALA PHE CYS HIS GLU LEU LEU ALA SEQRES 10 C 257 LEU GLN PRO ALA ALA ILE ARG GLY ASN ALA SER GLU ILE SEQRES 11 C 257 LEU ALA LEU ALA GLY MET SER ALA GLY GLY ARG GLY VAL SEQRES 12 C 257 ASP THR THR ASP THR ALA ALA ALA ALA LEU PRO ALA ALA SEQRES 13 C 257 GLN ALA LEU ALA ARG ARG LEU ALA THR VAL VAL ALA VAL SEQRES 14 C 257 THR GLY GLU VAL ASP TYR VAL THR ASP GLY GLU ARG VAL SEQRES 15 C 257 LEU SER VAL ALA GLY GLY ASN PRO LEU MET THR ARG VAL SEQRES 16 C 257 VAL GLY THR GLY CYS ALA LEU SER ALA VAL VAL ALA ALA SEQRES 17 C 257 SER ALA ALA LEU PRO GLY ASP ARG LEU GLU ASN VAL ALA SEQRES 18 C 257 ALA ALA CYS GLY LEU MET LYS GLN ALA GLY GLU ILE ALA SEQRES 19 C 257 ALA ARG GLN GLY GLY PRO GLY SER PHE ILE PRO ALA PHE SEQRES 20 C 257 LEU ASP ALA LEU TYR GLN GLU VAL GLN GLY HET TZE A 301 18 HET TZE A 302 18 HET MG A 303 1 HET MG B 301 1 HET TZE C 301 18 HET MG C 302 1 HETNAM TZE 2-(4-METHYL-THIAZOL-5-YL)-ETHANOL HETNAM MG MAGNESIUM ION HETSYN TZE 4-METHYL-5-HYDROXYETHYLTHIAZOLE FORMUL 4 TZE 3(C6 H9 N O S) FORMUL 6 MG 3(MG 2+) FORMUL 10 HOH *564(H2 O) HELIX 1 AA1 PRO A 9 SER A 21 1 13 HELIX 2 AA2 VAL A 32 VAL A 43 1 12 HELIX 3 AA3 ASP A 52 ALA A 61 1 10 HELIX 4 AA4 THR A 74 GLY A 92 1 19 HELIX 5 AA5 LEU A 105 ALA A 117 1 13 HELIX 6 AA6 ASN A 126 GLY A 135 1 10 HELIX 7 AA7 THR A 148 ALA A 151 5 4 HELIX 8 AA8 ALA A 152 ALA A 164 1 13 HELIX 9 AA9 ASN A 189 VAL A 195 5 7 HELIX 10 AB1 GLY A 197 ALA A 210 1 14 HELIX 11 AB2 ASP A 215 ARG A 236 1 22 HELIX 12 AB3 GLY A 239 TYR A 252 1 14 HELIX 13 AB4 VAL B 10 SER B 21 1 12 HELIX 14 AB5 VAL B 32 VAL B 43 1 12 HELIX 15 AB6 ASP B 52 ALA B 63 1 12 HELIX 16 AB7 THR B 74 ALA B 91 1 18 HELIX 17 AB8 LEU B 105 LEU B 116 1 12 HELIX 18 AB9 ALA B 117 GLN B 119 5 3 HELIX 19 AC1 ASN B 126 GLY B 135 1 10 HELIX 20 AC2 ALA B 149 ALA B 164 1 16 HELIX 21 AC3 ASN B 189 VAL B 195 5 7 HELIX 22 AC4 GLY B 197 ALA B 210 1 14 HELIX 23 AC5 ASP B 215 ALA B 235 1 21 HELIX 24 AC6 ARG B 236 GLY B 238 5 3 HELIX 25 AC7 GLY B 239 TYR B 252 1 14 HELIX 26 AC8 ALA C 8 SER C 21 1 14 HELIX 27 AC9 VAL C 32 VAL C 43 1 12 HELIX 28 AD1 ASP C 52 ALA C 63 1 12 HELIX 29 AD2 THR C 74 ALA C 91 1 18 HELIX 30 AD3 LEU C 105 ALA C 117 1 13 HELIX 31 AD4 ALA C 127 GLY C 135 1 9 HELIX 32 AD5 ALA C 149 ALA C 151 5 3 HELIX 33 AD6 ALA C 152 ALA C 164 1 13 HELIX 34 AD7 ASN C 189 VAL C 195 5 7 HELIX 35 AD8 GLY C 197 ALA C 210 1 14 HELIX 36 AD9 ASP C 215 ALA C 235 1 21 HELIX 37 AE1 GLY C 239 GLN C 253 1 15 SHEET 1 AA1 8 SER A 46 ALA A 48 0 SHEET 2 AA1 8 LEU A 23 MET A 27 1 N VAL A 24 O SER A 46 SHEET 3 AA1 8 ALA A 65 ASN A 69 1 O LEU A 67 N HIS A 25 SHEET 4 AA1 8 TRP A 95 ASP A 98 1 O ASP A 98 N ILE A 68 SHEET 5 AA1 8 ALA A 122 GLY A 125 1 O ARG A 124 N LEU A 97 SHEET 6 AA1 8 VAL A 166 VAL A 169 1 O ALA A 168 N ILE A 123 SHEET 7 AA1 8 ASP A 174 THR A 177 -1 O TYR A 175 N VAL A 169 SHEET 8 AA1 8 VAL A 182 VAL A 185 -1 O LEU A 183 N VAL A 176 SHEET 1 AA2 8 SER B 46 ALA B 48 0 SHEET 2 AA2 8 LEU B 23 MET B 27 1 N VAL B 24 O SER B 46 SHEET 3 AA2 8 ALA B 65 ASN B 69 1 O LEU B 67 N HIS B 25 SHEET 4 AA2 8 TRP B 95 ASP B 98 1 O ASP B 98 N ILE B 68 SHEET 5 AA2 8 ALA B 122 GLY B 125 1 O ALA B 122 N LEU B 97 SHEET 6 AA2 8 VAL B 166 VAL B 169 1 O ALA B 168 N ILE B 123 SHEET 7 AA2 8 ASP B 174 THR B 177 -1 O TYR B 175 N VAL B 169 SHEET 8 AA2 8 VAL B 182 VAL B 185 -1 O LEU B 183 N VAL B 176 SHEET 1 AA3 8 SER C 46 ALA C 48 0 SHEET 2 AA3 8 LEU C 23 MET C 27 1 N CYS C 26 O ALA C 48 SHEET 3 AA3 8 ALA C 65 ASN C 69 1 O LEU C 67 N HIS C 25 SHEET 4 AA3 8 TRP C 95 ASP C 98 1 O THR C 96 N ILE C 68 SHEET 5 AA3 8 ALA C 122 ASN C 126 1 O ARG C 124 N LEU C 97 SHEET 6 AA3 8 VAL C 166 THR C 170 1 O ALA C 168 N ILE C 123 SHEET 7 AA3 8 VAL C 173 THR C 177 -1 O TYR C 175 N VAL C 169 SHEET 8 AA3 8 VAL C 182 ALA C 186 -1 O VAL C 185 N ASP C 174 LINK OD1 ASP A 98 MG MG A 303 1555 1555 2.68 LINK OE1 GLU A 129 MG MG A 303 1555 1555 2.60 LINK MG MG A 303 O HOH A 539 1555 1555 2.97 LINK OD1 ASP B 98 MG MG B 301 1555 1555 2.62 LINK OE1 GLU B 129 MG MG B 301 1555 1555 2.63 LINK MG MG B 301 O HOH B 410 1555 1555 2.99 LINK OD1 ASP C 98 MG MG C 302 1555 1555 2.58 LINK OE1 GLU C 129 MG MG C 302 1555 1555 2.71 LINK MG MG C 302 O HOH C 462 1555 1555 2.89 SITE 1 AC1 6 PRO A 47 MET A 49 ASN B 29 GLY B 71 SITE 2 AC1 6 VAL B 196 CYS B 200 SITE 1 AC2 5 ASN A 29 GLY A 71 CYS A 200 PRO C 47 SITE 2 AC2 5 MET C 49 SITE 1 AC3 4 ASP A 98 ARG A 124 GLU A 129 HOH A 539 SITE 1 AC4 4 ASP B 98 ARG B 124 GLU B 129 HOH B 410 SITE 1 AC5 6 PRO B 47 MET B 49 GLY C 71 VAL C 196 SITE 2 AC5 6 GLY C 197 CYS C 200 SITE 1 AC6 5 ASP C 98 VAL C 100 ARG C 124 GLU C 129 SITE 2 AC6 5 HOH C 462 CRYST1 50.894 109.330 124.631 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019649 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009147 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008024 0.00000