HEADER GENE REGULATION 26-JUL-19 6KKO TITLE THE CRYSTAL STRUCTURE OF SIAB-SIAC COMPLEX FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SERINE PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SIAB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DUF1987 DOMAIN-CONTAINING PROTEIN; COMPND 8 CHAIN: C, D; COMPND 9 SYNONYM: SIAC; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: THE POLYPEPTIDE IS PHOSPHORYLATED ON THR (68) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 8 ORGANISM_TAXID: 287; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIAB-SIAC COMPLEX, PSEUDOMONAS AERUGINOSA, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR J.H.GAN,C.YANG REVDAT 2 23-OCT-24 6KKO 1 LINK REVDAT 1 10-JUN-20 6KKO 0 JRNL AUTH G.K.CHEN,J.H.GAN,C.YANG,Y.L.ZUO,J.PENG,M.LI,W.P.HUO,Y.P.XIE, JRNL AUTH 2 Y.N.ZHANG,T.T.WANG,X.DENG,H.H.LIANG JRNL TITL THE SIAA/B/C/D SIGNALING NETWORK REGULATES BIOFILM FORMATION JRNL TITL 2 IN PSEUDOMONAS AERUGINOSA. JRNL REF EMBO J. V. 39 03412 2020 JRNL REFN ESSN 1460-2075 JRNL PMID 32090355 JRNL DOI 10.15252/EMBJ.2019103412 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 35672 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 1646 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.1608 - 2.0990 0.97 0 0 0.2954 0.3339 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 53.5396 12.5397 25.1139 REMARK 3 T TENSOR REMARK 3 T11: 0.1918 T22: 0.1350 REMARK 3 T33: 0.1750 T12: -0.0007 REMARK 3 T13: 0.0018 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 1.0205 L22: 0.5460 REMARK 3 L33: 0.4224 L12: -0.0062 REMARK 3 L13: -0.0001 L23: 0.0131 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.1130 S13: -0.0101 REMARK 3 S21: -0.0310 S22: 0.0564 S23: -0.0329 REMARK 3 S31: 0.0042 S32: -0.0025 S33: -0.0203 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESSEQ 6:14 OR RESSEQ 16:20 REMARK 3 OR RESSEQ 22:27 OR RESSEQ 29:53 OR (RESID REMARK 3 54 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG OR NAME OD2)) REMARK 3 OR RESSEQ 55:90 OR (RESID 91 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG OR NAME OD2)) OR RESSEQ 92:104 REMARK 3 OR (RESID 105 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB OR NAME CG OR REMARK 3 NAME OD2)) OR RESSEQ 106:111 OR RESSEQ REMARK 3 113:121 OR (RESID 122 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESSEQ 123:129 OR (RESID 130 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESSEQ 131:134 OR RESSEQ 144:165 OR REMARK 3 RESSEQ 172:176 OR RESSEQ 178:180)) REMARK 3 SELECTION : (CHAIN B AND (RESSEQ 6:14 OR RESSEQ 16:20 REMARK 3 OR RESSEQ 22:27 OR RESSEQ 29:47 OR (RESID REMARK 3 48 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESSEQ 49:53 OR REMARK 3 (RESID 54 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 OD2)) OR RESSEQ 55:89 OR (RESID 90 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR (RESID 91 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME OD2)) OR RESSEQ 92:102 OR REMARK 3 (RESID 103 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESSEQ 104 OR (RESID 105 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME OD2)) OR RESSEQ 106:111 REMARK 3 OR RESSEQ 113:118 OR (RESID 119 AND (NAME REMARK 3 N OR NAME CA OR NAME C OR NAME O OR NAME REMARK 3 CB )) OR RESSEQ 120:134 OR RESSEQ 144:165 REMARK 3 OR RESSEQ 172:176 OR RESSEQ 178:180)) REMARK 3 ATOM PAIRS NUMBER : 1284 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND (RESSEQ 0:25 OR RESSEQ 27:33 REMARK 3 OR (RESID 34 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESSEQ REMARK 3 35:51 OR RESSEQ 53:62 OR (RESID 63 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD2)) OR REMARK 3 RESSEQ 64:99 OR (RESID 100 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESSEQ 101:108 OR RESSEQ REMARK 3 110:125)) REMARK 3 SELECTION : (CHAIN D AND (RESSEQ 0:25 OR RESSEQ 27:51 REMARK 3 OR RESSEQ 53 OR (RESID 54 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESSEQ 55:62 OR (RESID 63 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG OR NAME CD2)) OR RESSEQ 64:108 REMARK 3 OR RESSEQ 110:125)) REMARK 3 ATOM PAIRS NUMBER : 1114 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KKO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1300013176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9725 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35956 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.099 REMARK 200 RESOLUTION RANGE LOW (A) : 37.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: SCHISTOSE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5, 25% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.00750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 ARG A 135 REMARK 465 PRO A 136 REMARK 465 ARG A 137 REMARK 465 ASP A 138 REMARK 465 SER A 139 REMARK 465 GLY A 140 REMARK 465 CYS A 141 REMARK 465 ALA A 142 REMARK 465 SER A 143 REMARK 465 ARG B 135 REMARK 465 PRO B 136 REMARK 465 ARG B 137 REMARK 465 ASP B 138 REMARK 465 SER B 139 REMARK 465 GLY B 140 REMARK 465 CYS B 141 REMARK 465 ALA B 142 REMARK 465 SER B 143 REMARK 465 GLN B 167 REMARK 465 PRO B 168 REMARK 465 ASP B 169 REMARK 465 GLY B 170 REMARK 465 GLU D 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 GLU A 103 CD OE1 OE2 REMARK 470 ASN A 119 CG OD1 ND2 REMARK 470 GLN A 167 CG CD OE1 NE2 REMARK 470 SER B 0 OG REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 LYS B 130 CG CD CE NZ REMARK 470 GLN C 54 CG CD OE1 NE2 REMARK 470 ASN D 34 CG OD1 ND2 REMARK 470 ARG D 100 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE D 26 CA - C - N ANGL. DEV. = 16.3 DEGREES REMARK 500 MSE D 26 O - C - N ANGL. DEV. = -18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 168 9.45 -66.63 REMARK 500 LEU C 64 -104.73 -114.34 REMARK 500 LEU D 64 -89.75 -116.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MSE D 26 -10.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C1101 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 65 OD1 REMARK 620 2 ADP A1001 O1B 152.8 REMARK 620 3 ADP A1001 O2B 147.1 50.3 REMARK 620 4 ADP A1001 O2A 87.1 84.8 69.3 REMARK 620 5 TPO C 68 O1P 99.1 108.0 69.8 110.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B2002 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 65 OD1 REMARK 620 2 ADP B2001 O1B 153.1 REMARK 620 3 ADP B2001 O2B 149.4 50.3 REMARK 620 4 ADP B2001 O2A 92.7 80.7 68.2 REMARK 620 5 TPO D 68 O1P 100.4 105.8 70.8 118.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 1101 DBREF1 6KKO A 1 180 UNP A0A485GYA3_PSEAI DBREF2 6KKO A A0A485GYA3 668 847 DBREF1 6KKO B 1 180 UNP A0A485GYA3_PSEAI DBREF2 6KKO B A0A485GYA3 668 847 DBREF1 6KKO C 1 126 UNP A0A072ZHB4_PSEAI DBREF2 6KKO C A0A072ZHB4 1 126 DBREF1 6KKO D 1 126 UNP A0A072ZHB4_PSEAI DBREF2 6KKO D A0A072ZHB4 1 126 SEQADV 6KKO SER A 0 UNP A0A485GYA EXPRESSION TAG SEQADV 6KKO SER B 0 UNP A0A485GYA EXPRESSION TAG SEQADV 6KKO SER C 0 UNP A0A072ZHB EXPRESSION TAG SEQADV 6KKO SER D 0 UNP A0A072ZHB EXPRESSION TAG SEQRES 1 A 181 SER MSE GLU THR LEU ASP LEU LEU ALA MSE ARG GLU SER SEQRES 2 A 181 TYR THR ARG GLN ARG ILE LEU LEU CYS PHE ASN GLY PRO SEQRES 3 A 181 ILE SER ARG SER LEU ILE GLU GLU ILE GLY HIS ALA LEU SEQRES 4 A 181 ARG ASN TYR LEU HIS ALA GLU GLN ALA LYS PRO SER GLU SEQRES 5 A 181 ALA MSE ASP VAL PHE ALA VAL TYR ILE GLU MSE THR GLN SEQRES 6 A 181 ASN ILE ARG HIS TYR ALA ASN LEU LYS GLY TYR GLY GLU SEQRES 7 A 181 HIS GLU ALA ALA ALA THR VAL ALA ILE ALA ARG ASN GLU SEQRES 8 A 181 ASP GLY HIS TYR VAL VAL SER ALA GLY ASN LEU VAL GLU SEQRES 9 A 181 ARG ASP ASP GLY GLN SER LEU VAL ARG SER ILE GLN ALA SEQRES 10 A 181 ILE ALA ASN LEU ASP LYS ALA ALA LEU LYS ALA ALA TYR SEQRES 11 A 181 LYS GLU GLN LEU ARG ARG PRO ARG ASP SER GLY CYS ALA SEQRES 12 A 181 SER GLY ALA GLY LEU GLY LEU LEU ASP ILE ALA ARG LYS SEQRES 13 A 181 SER SER GLU PRO LEU ALA ALA SER LEU LYS GLU GLN PRO SEQRES 14 A 181 ASP GLY ARG ALA PHE PHE SER LEU ARG ALA VAL ILE SEQRES 1 B 181 SER MSE GLU THR LEU ASP LEU LEU ALA MSE ARG GLU SER SEQRES 2 B 181 TYR THR ARG GLN ARG ILE LEU LEU CYS PHE ASN GLY PRO SEQRES 3 B 181 ILE SER ARG SER LEU ILE GLU GLU ILE GLY HIS ALA LEU SEQRES 4 B 181 ARG ASN TYR LEU HIS ALA GLU GLN ALA LYS PRO SER GLU SEQRES 5 B 181 ALA MSE ASP VAL PHE ALA VAL TYR ILE GLU MSE THR GLN SEQRES 6 B 181 ASN ILE ARG HIS TYR ALA ASN LEU LYS GLY TYR GLY GLU SEQRES 7 B 181 HIS GLU ALA ALA ALA THR VAL ALA ILE ALA ARG ASN GLU SEQRES 8 B 181 ASP GLY HIS TYR VAL VAL SER ALA GLY ASN LEU VAL GLU SEQRES 9 B 181 ARG ASP ASP GLY GLN SER LEU VAL ARG SER ILE GLN ALA SEQRES 10 B 181 ILE ALA ASN LEU ASP LYS ALA ALA LEU LYS ALA ALA TYR SEQRES 11 B 181 LYS GLU GLN LEU ARG ARG PRO ARG ASP SER GLY CYS ALA SEQRES 12 B 181 SER GLY ALA GLY LEU GLY LEU LEU ASP ILE ALA ARG LYS SEQRES 13 B 181 SER SER GLU PRO LEU ALA ALA SER LEU LYS GLU GLN PRO SEQRES 14 B 181 ASP GLY ARG ALA PHE PHE SER LEU ARG ALA VAL ILE SEQRES 1 C 127 SER MSE SER ASP LEU HIS ILE PRO GLY THR GLN SER THR SEQRES 2 C 127 PRO ALA ILE GLN GLY ASP TRP GLN ALA GLY ARG LEU SER SEQRES 3 C 127 MSE GLN GLY ASP SER TYR PRO GLU ASN SER TYR GLU LEU SEQRES 4 C 127 PHE GLY GLN VAL ILE ASP TRP VAL GLU ARG PHE LEU ALA SEQRES 5 C 127 ASP GLY GLN ARG PRO LEU GLU LEU ASP LEU ARG LEU LEU SEQRES 6 C 127 TYR LEU ASN TPO SER SER ILE LYS ALA MSE MSE ASP ILE SEQRES 7 C 127 LEU ASP LEU LEU GLU GLU ALA HIS GLN GLY GLY ARG PRO SEQRES 8 C 127 VAL SER LEU ARG TRP HIS TYR ASP ARG ARG ASN GLU ARG SEQRES 9 C 127 VAL ALA GLU LEU ALA GLU GLU PHE ARG GLU ASP CYS SER SEQRES 10 C 127 PHE PRO PHE ALA ILE GLN ALA HIS ASP GLU SEQRES 1 D 127 SER MSE SER ASP LEU HIS ILE PRO GLY THR GLN SER THR SEQRES 2 D 127 PRO ALA ILE GLN GLY ASP TRP GLN ALA GLY ARG LEU SER SEQRES 3 D 127 MSE GLN GLY ASP SER TYR PRO GLU ASN SER TYR GLU LEU SEQRES 4 D 127 PHE GLY GLN VAL ILE ASP TRP VAL GLU ARG PHE LEU ALA SEQRES 5 D 127 ASP GLY GLN ARG PRO LEU GLU LEU ASP LEU ARG LEU LEU SEQRES 6 D 127 TYR LEU ASN TPO SER SER ILE LYS ALA MSE MSE ASP ILE SEQRES 7 D 127 LEU ASP LEU LEU GLU GLU ALA HIS GLN GLY GLY ARG PRO SEQRES 8 D 127 VAL SER LEU ARG TRP HIS TYR ASP ARG ARG ASN GLU ARG SEQRES 9 D 127 VAL ALA GLU LEU ALA GLU GLU PHE ARG GLU ASP CYS SER SEQRES 10 D 127 PHE PRO PHE ALA ILE GLN ALA HIS ASP GLU MODRES 6KKO MSE A 9 MET MODIFIED RESIDUE MODRES 6KKO MSE A 53 MET MODIFIED RESIDUE MODRES 6KKO MSE A 62 MET MODIFIED RESIDUE MODRES 6KKO MSE B 1 MET MODIFIED RESIDUE MODRES 6KKO MSE B 9 MET MODIFIED RESIDUE MODRES 6KKO MSE B 53 MET MODIFIED RESIDUE MODRES 6KKO MSE B 62 MET MODIFIED RESIDUE MODRES 6KKO MSE C 1 MET MODIFIED RESIDUE MODRES 6KKO MSE C 26 MET MODIFIED RESIDUE MODRES 6KKO TPO C 68 THR MODIFIED RESIDUE MODRES 6KKO MSE C 74 MET MODIFIED RESIDUE MODRES 6KKO MSE C 75 MET MODIFIED RESIDUE MODRES 6KKO MSE D 1 MET MODIFIED RESIDUE MODRES 6KKO MSE D 26 MET MODIFIED RESIDUE MODRES 6KKO TPO D 68 THR MODIFIED RESIDUE MODRES 6KKO MSE D 74 MET MODIFIED RESIDUE MODRES 6KKO MSE D 75 MET MODIFIED RESIDUE HET MSE A 9 8 HET MSE A 53 8 HET MSE A 62 8 HET MSE B 1 8 HET MSE B 9 8 HET MSE B 53 8 HET MSE B 62 8 HET MSE C 1 8 HET MSE C 26 8 HET TPO C 68 11 HET MSE C 74 8 HET MSE C 75 8 HET MSE D 1 8 HET MSE D 26 8 HET TPO D 68 11 HET MSE D 74 8 HET MSE D 75 8 HET ADP A1001 27 HET ADP B2001 27 HET NA B2002 1 HET NA C1101 1 HETNAM MSE SELENOMETHIONINE HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM NA SODIUM ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 MSE 15(C5 H11 N O2 SE) FORMUL 3 TPO 2(C4 H10 N O6 P) FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 NA 2(NA 1+) FORMUL 9 HOH *135(H2 O) HELIX 1 AA1 ASP A 5 GLN A 16 1 12 HELIX 2 AA2 SER A 27 GLU A 45 1 19 HELIX 3 AA3 LYS A 48 LYS A 73 1 26 HELIX 4 AA4 ARG A 104 ASN A 119 1 16 HELIX 5 AA5 ASP A 121 LEU A 133 1 13 HELIX 6 AA6 GLY A 146 SER A 156 1 11 HELIX 7 AA7 MSE B 1 GLN B 16 1 16 HELIX 8 AA8 SER B 27 GLU B 45 1 19 HELIX 9 AA9 LYS B 48 LYS B 73 1 26 HELIX 10 AB1 GLU B 103 ASN B 119 1 17 HELIX 11 AB2 ASP B 121 LEU B 133 1 13 HELIX 12 AB3 GLY B 146 SER B 156 1 11 HELIX 13 AB4 ASN C 34 ASP C 52 1 19 HELIX 14 AB5 ASN C 67 GLY C 87 1 21 HELIX 15 AB6 ASN C 101 GLU C 113 1 13 HELIX 16 AB7 SER D 35 ASP D 52 1 18 HELIX 17 AB8 ASN D 67 GLY D 87 1 21 HELIX 18 AB9 ASN D 101 GLU D 113 1 13 SHEET 1 AA110 ALA A 161 LYS A 165 0 SHEET 2 AA110 ARG A 171 VAL A 179 -1 O ARG A 177 N ALA A 161 SHEET 3 AA110 TYR A 94 GLU A 103 -1 N VAL A 102 O ALA A 172 SHEET 4 AA110 ALA A 81 ARG A 88 -1 N ALA A 85 O SER A 97 SHEET 5 AA110 ILE A 18 PRO A 25 -1 N LEU A 20 O ILE A 86 SHEET 6 AA110 ILE B 18 PRO B 25 -1 O CYS B 21 N ASN A 23 SHEET 7 AA110 ALA B 81 ARG B 88 -1 O ILE B 86 N LEU B 19 SHEET 8 AA110 TYR B 94 VAL B 102 -1 O SER B 97 N ALA B 85 SHEET 9 AA110 ALA B 172 VAL B 179 -1 O PHE B 174 N ASN B 100 SHEET 10 AA110 ALA B 161 LYS B 165 -1 N ALA B 161 O ARG B 177 SHEET 1 AA2 6 LEU C 4 ILE C 6 0 SHEET 2 AA2 6 ALA C 14 ASP C 18 -1 O GLY C 17 N LEU C 4 SHEET 3 AA2 6 ARG C 23 SER C 30 -1 O ARG C 23 N ASP C 18 SHEET 4 AA2 6 LEU C 57 LEU C 66 1 O ARG C 62 N MSE C 26 SHEET 5 AA2 6 VAL C 91 ASP C 98 1 O ARG C 94 N LEU C 61 SHEET 6 AA2 6 PHE C 119 HIS C 124 1 O ALA C 120 N LEU C 93 SHEET 1 AA3 6 LEU D 4 ILE D 6 0 SHEET 2 AA3 6 ALA D 14 ASP D 18 -1 O GLY D 17 N LEU D 4 SHEET 3 AA3 6 ARG D 23 SER D 30 -1 O ARG D 23 N ASP D 18 SHEET 4 AA3 6 LEU D 57 LEU D 66 1 O TYR D 65 N SER D 30 SHEET 5 AA3 6 VAL D 91 ASP D 98 1 O ARG D 94 N LEU D 61 SHEET 6 AA3 6 PHE D 119 HIS D 124 1 O ALA D 120 N TRP D 95 LINK C ALA A 8 N MSE A 9 1555 1555 1.33 LINK C MSE A 9 N ARG A 10 1555 1555 1.34 LINK C ALA A 52 N MSE A 53 1555 1555 1.33 LINK C MSE A 53 N ASP A 54 1555 1555 1.34 LINK C GLU A 61 N MSE A 62 1555 1555 1.33 LINK C MSE A 62 N THR A 63 1555 1555 1.33 LINK C SER B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N GLU B 2 1555 1555 1.33 LINK C ALA B 8 N MSE B 9 1555 1555 1.33 LINK C MSE B 9 N ARG B 10 1555 1555 1.34 LINK C ALA B 52 N MSE B 53 1555 1555 1.33 LINK C MSE B 53 N ASP B 54 1555 1555 1.34 LINK C GLU B 61 N MSE B 62 1555 1555 1.33 LINK C MSE B 62 N THR B 63 1555 1555 1.33 LINK C SER C 0 N MSE C 1 1555 1555 1.33 LINK C MSE C 1 N SER C 2 1555 1555 1.33 LINK C SER C 25 N MSE C 26 1555 1555 1.33 LINK C MSE C 26 N GLN C 27 1555 1555 1.34 LINK C ASN C 67 N TPO C 68 1555 1555 1.33 LINK C TPO C 68 N SER C 69 1555 1555 1.33 LINK C ALA C 73 N MSE C 74 1555 1555 1.33 LINK C MSE C 74 N MSE C 75 1555 1555 1.33 LINK C MSE C 75 N ASP C 76 1555 1555 1.34 LINK C SER D 0 N MSE D 1 1555 1555 1.33 LINK C MSE D 1 N SER D 2 1555 1555 1.33 LINK C SER D 25 N MSE D 26 1555 1555 1.32 LINK C MSE D 26 N GLN D 27 1555 1555 1.24 LINK C ASN D 67 N TPO D 68 1555 1555 1.33 LINK C TPO D 68 N SER D 69 1555 1555 1.33 LINK C ALA D 73 N MSE D 74 1555 1555 1.33 LINK C MSE D 74 N MSE D 75 1555 1555 1.33 LINK C MSE D 75 N ASP D 76 1555 1555 1.34 LINK OD1 ASN A 65 NA NA C1101 1555 1555 2.48 LINK O1B ADP A1001 NA NA C1101 1555 1555 2.86 LINK O2B ADP A1001 NA NA C1101 1555 1555 2.99 LINK O2A ADP A1001 NA NA C1101 1555 1555 2.07 LINK OD1 ASN B 65 NA NA B2002 1555 1555 2.42 LINK O1B ADP B2001 NA NA B2002 1555 1555 2.92 LINK O2B ADP B2001 NA NA B2002 1555 1555 2.77 LINK O2A ADP B2001 NA NA B2002 1555 1555 2.02 LINK NA NA B2002 O1P TPO D 68 1555 1555 2.02 LINK O1P TPO C 68 NA NA C1101 1555 1555 2.04 SITE 1 AC1 13 GLN A 46 ASN A 65 TYR A 69 ASN A 100 SITE 2 AC1 13 VAL A 102 LEU A 110 GLY A 146 LEU A 147 SITE 3 AC1 13 GLY A 148 LEU A 149 HOH A1124 TPO C 68 SITE 4 AC1 13 NA C1101 SITE 1 AC2 15 GLN B 46 ASN B 65 TYR B 69 ASN B 100 SITE 2 AC2 15 LEU B 110 GLY B 144 GLY B 146 LEU B 147 SITE 3 AC2 15 GLY B 148 LEU B 149 NA B2002 HOH B2112 SITE 4 AC2 15 HOH B2113 HOH B2120 TPO D 68 SITE 1 AC3 3 ASN B 65 ADP B2001 TPO D 68 SITE 1 AC4 3 ASN A 65 ADP A1001 TPO C 68 CRYST1 75.618 42.015 96.584 90.00 93.45 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013224 0.000000 0.000797 0.00000 SCALE2 0.000000 0.023801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010372 0.00000