data_6KMC # _entry.id 6KMC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6KMC pdb_00006kmc 10.2210/pdb6kmc/pdb WWPDB D_1300013285 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6KMC _pdbx_database_status.recvd_initial_deposition_date 2019-07-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Watanabe, H.' 1 0000-0002-9561-4077 'Honda, S.' 2 0000-0002-7878-3944 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1554-8937 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 2729 _citation.page_last 2736 _citation.title 'Histidine-Mediated Intramolecular Electrostatic Repulsion for Controlling pH-Dependent Protein-Protein Interaction.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acschembio.9b00652 _citation.pdbx_database_id_PubMed 31596562 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Watanabe, H.' 1 ? primary 'Yoshida, C.' 2 ? primary 'Ooishi, A.' 3 ? primary 'Nakai, Y.' 4 ? primary 'Ueda, M.' 5 ? primary 'Isobe, Y.' 6 ? primary 'Honda, S.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6KMC _cell.details ? _cell.formula_units_Z ? _cell.length_a 85.827 _cell.length_a_esd ? _cell.length_b 29.439 _cell.length_b_esd ? _cell.length_c 36.017 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KMC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Immunoglobulin G-binding protein G B1' 6474.158 2 ? ? ? ? 2 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 3 water nat water 18.015 110 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MDTYKLILNGKTLKGETTTEAVDAAHAEKVFKHYANEHGVHGHWTYDPETKTFTVTE _entity_poly.pdbx_seq_one_letter_code_can MDTYKLILNGKTLKGETTTEAVDAAHAEKVFKHYANEHGVHGHWTYDPETKTFTVTE _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 THR n 1 4 TYR n 1 5 LYS n 1 6 LEU n 1 7 ILE n 1 8 LEU n 1 9 ASN n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 LEU n 1 14 LYS n 1 15 GLY n 1 16 GLU n 1 17 THR n 1 18 THR n 1 19 THR n 1 20 GLU n 1 21 ALA n 1 22 VAL n 1 23 ASP n 1 24 ALA n 1 25 ALA n 1 26 HIS n 1 27 ALA n 1 28 GLU n 1 29 LYS n 1 30 VAL n 1 31 PHE n 1 32 LYS n 1 33 HIS n 1 34 TYR n 1 35 ALA n 1 36 ASN n 1 37 GLU n 1 38 HIS n 1 39 GLY n 1 40 VAL n 1 41 HIS n 1 42 GLY n 1 43 HIS n 1 44 TRP n 1 45 THR n 1 46 TYR n 1 47 ASP n 1 48 PRO n 1 49 GLU n 1 50 THR n 1 51 LYS n 1 52 THR n 1 53 PHE n 1 54 THR n 1 55 VAL n 1 56 THR n 1 57 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 57 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name ;Streptococcus sp. 'group G' ; _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1320 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6KMC _struct_ref.pdbx_db_accession 6KMC _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6KMC A 1 ? 57 ? 6KMC 0 ? 56 ? 0 56 2 1 6KMC B 1 ? 57 ? 6KMC 0 ? 56 ? 0 56 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6KMC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.76 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 30.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% polyethylene glycol 8000, 100 mM imidazole hydrochloride (pH 8.0), 200 mM NaCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-11-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6KMC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.620 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12052 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.300 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.859 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.050 _reflns.pdbx_Rpim_I_all 0.020 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 75501 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.620 1.650 ? ? ? ? ? ? 560 93.200 ? ? ? ? 0.130 ? ? ? ? ? ? ? ? 5.500 ? 0.576 ? ? 0.144 0.060 ? 1 1 0.990 ? 1.650 1.680 ? ? ? ? ? ? 542 94.900 ? ? ? ? 0.121 ? ? ? ? ? ? ? ? 6.300 ? 0.581 ? ? 0.133 0.052 ? 2 1 0.991 ? 1.680 1.710 ? ? ? ? ? ? 580 96.300 ? ? ? ? 0.113 ? ? ? ? ? ? ? ? 6.400 ? 0.651 ? ? 0.124 0.048 ? 3 1 0.994 ? 1.710 1.750 ? ? ? ? ? ? 575 97.100 ? ? ? ? 0.100 ? ? ? ? ? ? ? ? 6.400 ? 0.688 ? ? 0.109 0.043 ? 4 1 0.994 ? 1.750 1.780 ? ? ? ? ? ? 592 99.000 ? ? ? ? 0.091 ? ? ? ? ? ? ? ? 6.500 ? 0.711 ? ? 0.099 0.039 ? 5 1 0.995 ? 1.780 1.820 ? ? ? ? ? ? 578 99.100 ? ? ? ? 0.083 ? ? ? ? ? ? ? ? 6.400 ? 0.675 ? ? 0.090 0.035 ? 6 1 0.996 ? 1.820 1.870 ? ? ? ? ? ? 614 99.400 ? ? ? ? 0.077 ? ? ? ? ? ? ? ? 6.500 ? 0.820 ? ? 0.084 0.033 ? 7 1 0.996 ? 1.870 1.920 ? ? ? ? ? ? 577 99.500 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 6.500 ? 0.898 ? ? 0.082 0.032 ? 8 1 0.996 ? 1.920 1.980 ? ? ? ? ? ? 609 99.500 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 6.100 ? 0.969 ? ? 0.073 0.030 ? 9 1 0.997 ? 1.980 2.040 ? ? ? ? ? ? 588 99.700 ? ? ? ? 0.064 ? ? ? ? ? ? ? ? 5.900 ? 0.997 ? ? 0.070 0.028 ? 10 1 0.996 ? 2.040 2.110 ? ? ? ? ? ? 637 99.700 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 6.300 ? 0.957 ? ? 0.063 0.025 ? 11 1 0.998 ? 2.110 2.200 ? ? ? ? ? ? 571 99.700 ? ? ? ? 0.056 ? ? ? ? ? ? ? ? 6.700 ? 0.920 ? ? 0.061 0.023 ? 12 1 0.998 ? 2.200 2.300 ? ? ? ? ? ? 607 99.700 ? ? ? ? 0.053 ? ? ? ? ? ? ? ? 6.600 ? 0.906 ? ? 0.058 0.022 ? 13 1 0.998 ? 2.300 2.420 ? ? ? ? ? ? 607 99.700 ? ? ? ? 0.052 ? ? ? ? ? ? ? ? 6.600 ? 0.957 ? ? 0.057 0.022 ? 14 1 0.996 ? 2.420 2.570 ? ? ? ? ? ? 616 99.800 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 6.500 ? 0.932 ? ? 0.051 0.020 ? 15 1 0.998 ? 2.570 2.770 ? ? ? ? ? ? 610 100.000 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 6.000 ? 0.931 ? ? 0.050 0.020 ? 16 1 0.998 ? 2.770 3.050 ? ? ? ? ? ? 619 100.000 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 5.800 ? 0.915 ? ? 0.047 0.019 ? 17 1 0.998 ? 3.050 3.490 ? ? ? ? ? ? 627 100.000 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 6.600 ? 0.979 ? ? 0.043 0.016 ? 18 1 0.999 ? 3.490 4.400 ? ? ? ? ? ? 639 99.700 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 6.300 ? 1.084 ? ? 0.043 0.017 ? 19 1 0.999 ? 4.400 50.000 ? ? ? ? ? ? 704 100.000 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 5.600 ? 0.913 ? ? 0.044 0.018 ? 20 1 0.997 ? # _refine.aniso_B[1][1] -1.0900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.1000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 1.1900 _refine.B_iso_max 52.210 _refine.B_iso_mean 18.2520 _refine.B_iso_min 4.180 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9120 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6KMC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8400 _refine.ls_d_res_low 42.9100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7988 _refine.ls_number_reflns_R_free 404 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7900 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2007 _refine.ls_R_factor_R_free 0.2669 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1973 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2ZW1 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1900 _refine.pdbx_overall_ESU_R_Free 0.1790 _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.1230 _refine.overall_SU_ML 0.1240 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.8400 _refine_hist.d_res_low 42.9100 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 1028 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 114 _refine_hist.pdbx_B_iso_mean_ligand 15.79 _refine_hist.pdbx_B_iso_mean_solvent 26.61 _refine_hist.pdbx_number_atoms_protein 914 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.030 0.021 941 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 2.315 1.914 1277 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 6.945 5.000 112 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.763 25.000 44 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.816 15.000 154 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.159 0.200 142 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.015 0.020 712 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8400 _refine_ls_shell.d_res_low 1.8880 _refine_ls_shell.number_reflns_all 588 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 25 _refine_ls_shell.number_reflns_R_work 563 _refine_ls_shell.percent_reflns_obs 99.4900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3180 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2260 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6KMC _struct.title 'Crystal structure of a Streptococcal protein G B1 mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6KMC _struct_keywords.text 'Streptococcal protein G B1 Domain, Immunoglobulin binding protein, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 23 ? HIS A 38 ? ASP A 22 HIS A 37 1 ? 16 HELX_P HELX_P2 AA2 ASP B 23 ? HIS B 38 ? ASP B 22 HIS B 37 1 ? 16 HELX_P HELX_P3 AA3 PRO B 48 ? THR B 50 ? PRO B 47 THR B 49 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 14 ? ALA A 21 ? LYS A 13 ALA A 20 AA1 2 ASP A 2 ? ASN A 9 ? ASP A 1 ASN A 8 AA1 3 THR A 52 ? THR A 56 ? THR A 51 THR A 55 AA1 4 HIS A 43 ? ASP A 47 ? HIS A 42 ASP A 46 AA2 1 LYS B 14 ? ALA B 21 ? LYS B 13 ALA B 20 AA2 2 ASP B 2 ? ASN B 9 ? ASP B 1 ASN B 8 AA2 3 THR B 52 ? THR B 56 ? THR B 51 THR B 55 AA2 4 HIS B 43 ? ASP B 47 ? HIS B 42 ASP B 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 17 ? O THR A 16 N LEU A 6 ? N LEU A 5 AA1 2 3 N ASN A 9 ? N ASN A 8 O VAL A 55 ? O VAL A 54 AA1 3 4 O THR A 54 ? O THR A 53 N THR A 45 ? N THR A 44 AA2 1 2 O ALA B 21 ? O ALA B 20 N ASP B 2 ? N ASP B 1 AA2 2 3 N ASN B 9 ? N ASN B 8 O VAL B 55 ? O VAL B 54 AA2 3 4 O THR B 52 ? O THR B 51 N ASP B 47 ? N ASP B 46 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ACY _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'binding site for residue ACY A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TYR A 4 ? TYR A 3 . ? 1_555 ? 2 AC1 7 ALA A 24 ? ALA A 23 . ? 1_555 ? 3 AC1 7 ALA A 24 ? ALA A 23 . ? 2_555 ? 4 AC1 7 TYR A 46 ? TYR A 45 . ? 1_555 ? 5 AC1 7 LYS A 51 ? LYS A 50 . ? 1_555 ? 6 AC1 7 HOH D . ? HOH A 215 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH A 233 . ? 1_555 ? # _atom_sites.entry_id 6KMC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011651 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027765 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 ASP 2 1 1 ASP ASP A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 TYR 4 3 3 TYR TYR A . n A 1 5 LYS 5 4 4 LYS LYS A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 ASN 9 8 8 ASN ASN A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 THR 12 11 11 THR THR A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 LYS 32 31 31 LYS LYS A . n A 1 33 HIS 33 32 32 HIS HIS A . n A 1 34 TYR 34 33 33 TYR TYR A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 ASN 36 35 35 ASN ASN A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 HIS 38 37 37 HIS HIS A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 HIS 41 40 40 HIS HIS A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 HIS 43 42 42 HIS HIS A . n A 1 44 TRP 44 43 43 TRP TRP A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 TYR 46 45 45 TYR TYR A . n A 1 47 ASP 47 46 46 ASP ASP A . n A 1 48 PRO 48 47 47 PRO PRO A . n A 1 49 GLU 49 48 48 GLU GLU A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 THR 54 53 53 THR THR A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 THR 56 55 55 THR THR A . n A 1 57 GLU 57 56 56 GLU GLU A . n B 1 1 MET 1 0 0 MET MET B . n B 1 2 ASP 2 1 1 ASP ASP B . n B 1 3 THR 3 2 2 THR THR B . n B 1 4 TYR 4 3 3 TYR TYR B . n B 1 5 LYS 5 4 4 LYS LYS B . n B 1 6 LEU 6 5 5 LEU LEU B . n B 1 7 ILE 7 6 6 ILE ILE B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 ASN 9 8 8 ASN ASN B . n B 1 10 GLY 10 9 9 GLY GLY B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 THR 12 11 11 THR THR B . n B 1 13 LEU 13 12 12 LEU LEU B . n B 1 14 LYS 14 13 13 LYS LYS B . n B 1 15 GLY 15 14 14 GLY GLY B . n B 1 16 GLU 16 15 15 GLU GLU B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 THR 18 17 17 THR THR B . n B 1 19 THR 19 18 18 THR THR B . n B 1 20 GLU 20 19 19 GLU GLU B . n B 1 21 ALA 21 20 20 ALA ALA B . n B 1 22 VAL 22 21 21 VAL VAL B . n B 1 23 ASP 23 22 22 ASP ASP B . n B 1 24 ALA 24 23 23 ALA ALA B . n B 1 25 ALA 25 24 24 ALA ALA B . n B 1 26 HIS 26 25 25 HIS HIS B . n B 1 27 ALA 27 26 26 ALA ALA B . n B 1 28 GLU 28 27 27 GLU GLU B . n B 1 29 LYS 29 28 28 LYS LYS B . n B 1 30 VAL 30 29 29 VAL VAL B . n B 1 31 PHE 31 30 30 PHE PHE B . n B 1 32 LYS 32 31 31 LYS LYS B . n B 1 33 HIS 33 32 32 HIS HIS B . n B 1 34 TYR 34 33 33 TYR TYR B . n B 1 35 ALA 35 34 34 ALA ALA B . n B 1 36 ASN 36 35 35 ASN ASN B . n B 1 37 GLU 37 36 36 GLU GLU B . n B 1 38 HIS 38 37 37 HIS HIS B . n B 1 39 GLY 39 38 38 GLY GLY B . n B 1 40 VAL 40 39 39 VAL VAL B . n B 1 41 HIS 41 40 40 HIS HIS B . n B 1 42 GLY 42 41 41 GLY GLY B . n B 1 43 HIS 43 42 42 HIS HIS B . n B 1 44 TRP 44 43 43 TRP TRP B . n B 1 45 THR 45 44 44 THR THR B . n B 1 46 TYR 46 45 45 TYR TYR B . n B 1 47 ASP 47 46 46 ASP ASP B . n B 1 48 PRO 48 47 47 PRO PRO B . n B 1 49 GLU 49 48 48 GLU GLU B . n B 1 50 THR 50 49 49 THR THR B . n B 1 51 LYS 51 50 50 LYS LYS B . n B 1 52 THR 52 51 51 THR THR B . n B 1 53 PHE 53 52 52 PHE PHE B . n B 1 54 THR 54 53 53 THR THR B . n B 1 55 VAL 55 54 54 VAL VAL B . n B 1 56 THR 56 55 55 THR THR B . n B 1 57 GLU 57 56 56 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACY 1 101 1 ACY ACY A . D 3 HOH 1 201 96 HOH HOH A . D 3 HOH 2 202 76 HOH HOH A . D 3 HOH 3 203 79 HOH HOH A . D 3 HOH 4 204 15 HOH HOH A . D 3 HOH 5 205 78 HOH HOH A . D 3 HOH 6 206 107 HOH HOH A . D 3 HOH 7 207 80 HOH HOH A . D 3 HOH 8 208 20 HOH HOH A . D 3 HOH 9 209 14 HOH HOH A . D 3 HOH 10 210 71 HOH HOH A . D 3 HOH 11 211 73 HOH HOH A . D 3 HOH 12 212 63 HOH HOH A . D 3 HOH 13 213 18 HOH HOH A . D 3 HOH 14 214 10 HOH HOH A . D 3 HOH 15 215 64 HOH HOH A . D 3 HOH 16 216 11 HOH HOH A . D 3 HOH 17 217 84 HOH HOH A . D 3 HOH 18 218 5 HOH HOH A . D 3 HOH 19 219 99 HOH HOH A . D 3 HOH 20 220 88 HOH HOH A . D 3 HOH 21 221 72 HOH HOH A . D 3 HOH 22 222 69 HOH HOH A . D 3 HOH 23 223 19 HOH HOH A . D 3 HOH 24 224 43 HOH HOH A . D 3 HOH 25 225 53 HOH HOH A . D 3 HOH 26 226 6 HOH HOH A . D 3 HOH 27 227 32 HOH HOH A . D 3 HOH 28 228 103 HOH HOH A . D 3 HOH 29 229 97 HOH HOH A . D 3 HOH 30 230 59 HOH HOH A . D 3 HOH 31 231 44 HOH HOH A . D 3 HOH 32 232 27 HOH HOH A . D 3 HOH 33 233 1 HOH HOH A . D 3 HOH 34 234 108 HOH HOH A . D 3 HOH 35 235 60 HOH HOH A . D 3 HOH 36 236 55 HOH HOH A . D 3 HOH 37 237 100 HOH HOH A . D 3 HOH 38 238 58 HOH HOH A . D 3 HOH 39 239 86 HOH HOH A . D 3 HOH 40 240 62 HOH HOH A . D 3 HOH 41 241 30 HOH HOH A . D 3 HOH 42 242 75 HOH HOH A . D 3 HOH 43 243 106 HOH HOH A . D 3 HOH 44 244 25 HOH HOH A . D 3 HOH 45 245 74 HOH HOH A . D 3 HOH 46 246 41 HOH HOH A . D 3 HOH 47 247 48 HOH HOH A . D 3 HOH 48 248 89 HOH HOH A . D 3 HOH 49 249 33 HOH HOH A . D 3 HOH 50 250 85 HOH HOH A . D 3 HOH 51 251 98 HOH HOH A . D 3 HOH 52 252 67 HOH HOH A . D 3 HOH 53 253 68 HOH HOH A . E 3 HOH 1 101 45 HOH HOH B . E 3 HOH 2 102 54 HOH HOH B . E 3 HOH 3 103 104 HOH HOH B . E 3 HOH 4 104 95 HOH HOH B . E 3 HOH 5 105 49 HOH HOH B . E 3 HOH 6 106 37 HOH HOH B . E 3 HOH 7 107 46 HOH HOH B . E 3 HOH 8 108 17 HOH HOH B . E 3 HOH 9 109 105 HOH HOH B . E 3 HOH 10 110 9 HOH HOH B . E 3 HOH 11 111 102 HOH HOH B . E 3 HOH 12 112 87 HOH HOH B . E 3 HOH 13 113 35 HOH HOH B . E 3 HOH 14 114 101 HOH HOH B . E 3 HOH 15 115 31 HOH HOH B . E 3 HOH 16 116 8 HOH HOH B . E 3 HOH 17 117 29 HOH HOH B . E 3 HOH 18 118 83 HOH HOH B . E 3 HOH 19 119 65 HOH HOH B . E 3 HOH 20 120 21 HOH HOH B . E 3 HOH 21 121 51 HOH HOH B . E 3 HOH 22 122 50 HOH HOH B . E 3 HOH 23 123 4 HOH HOH B . E 3 HOH 24 124 42 HOH HOH B . E 3 HOH 25 125 92 HOH HOH B . E 3 HOH 26 126 90 HOH HOH B . E 3 HOH 27 127 34 HOH HOH B . E 3 HOH 28 128 47 HOH HOH B . E 3 HOH 29 129 26 HOH HOH B . E 3 HOH 30 130 38 HOH HOH B . E 3 HOH 31 131 13 HOH HOH B . E 3 HOH 32 132 24 HOH HOH B . E 3 HOH 33 133 22 HOH HOH B . E 3 HOH 34 134 7 HOH HOH B . E 3 HOH 35 135 2 HOH HOH B . E 3 HOH 36 136 36 HOH HOH B . E 3 HOH 37 137 3 HOH HOH B . E 3 HOH 38 138 110 HOH HOH B . E 3 HOH 39 139 40 HOH HOH B . E 3 HOH 40 140 82 HOH HOH B . E 3 HOH 41 141 39 HOH HOH B . E 3 HOH 42 142 77 HOH HOH B . E 3 HOH 43 143 91 HOH HOH B . E 3 HOH 44 144 70 HOH HOH B . E 3 HOH 45 145 16 HOH HOH B . E 3 HOH 46 146 12 HOH HOH B . E 3 HOH 47 147 57 HOH HOH B . E 3 HOH 48 148 61 HOH HOH B . E 3 HOH 49 149 93 HOH HOH B . E 3 HOH 50 150 81 HOH HOH B . E 3 HOH 51 151 109 HOH HOH B . E 3 HOH 52 152 23 HOH HOH B . E 3 HOH 53 153 56 HOH HOH B . E 3 HOH 54 154 28 HOH HOH B . E 3 HOH 55 155 94 HOH HOH B . E 3 HOH 56 156 52 HOH HOH B . E 3 HOH 57 157 66 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D 2 1 B,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 250 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-10-23 2 'Structure model' 1 1 2020-01-08 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0072 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_entry_details.entry_id 6KMC _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 C A ACY 101 ? ? 1_555 CH3 A ACY 101 ? ? 2_555 1.74 2 1 CH3 A ACY 101 ? ? 1_555 CH3 A ACY 101 ? ? 2_555 1.80 3 1 O A ACY 101 ? ? 1_555 CH3 A ACY 101 ? ? 2_555 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A TRP 43 ? ? CG A TRP 43 ? ? 1.379 1.498 -0.119 0.018 N 2 1 CD B GLU 19 ? ? OE2 B GLU 19 ? ? 1.330 1.252 0.078 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 7 ? ? CG A LEU 7 ? ? CD1 A LEU 7 ? ? 99.96 111.00 -11.04 1.70 N 2 1 CB A ASP 22 ? ? CG A ASP 22 ? ? OD1 A ASP 22 ? ? 123.77 118.30 5.47 0.90 N 3 1 CB B LEU 7 ? ? CG B LEU 7 ? ? CD1 B LEU 7 ? ? 94.19 111.00 -16.81 1.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ASN N N N N 22 ASN CA C N S 23 ASN C C N N 24 ASN O O N N 25 ASN CB C N N 26 ASN CG C N N 27 ASN OD1 O N N 28 ASN ND2 N N N 29 ASN OXT O N N 30 ASN H H N N 31 ASN H2 H N N 32 ASN HA H N N 33 ASN HB2 H N N 34 ASN HB3 H N N 35 ASN HD21 H N N 36 ASN HD22 H N N 37 ASN HXT H N N 38 ASP N N N N 39 ASP CA C N S 40 ASP C C N N 41 ASP O O N N 42 ASP CB C N N 43 ASP CG C N N 44 ASP OD1 O N N 45 ASP OD2 O N N 46 ASP OXT O N N 47 ASP H H N N 48 ASP H2 H N N 49 ASP HA H N N 50 ASP HB2 H N N 51 ASP HB3 H N N 52 ASP HD2 H N N 53 ASP HXT H N N 54 GLU N N N N 55 GLU CA C N S 56 GLU C C N N 57 GLU O O N N 58 GLU CB C N N 59 GLU CG C N N 60 GLU CD C N N 61 GLU OE1 O N N 62 GLU OE2 O N N 63 GLU OXT O N N 64 GLU H H N N 65 GLU H2 H N N 66 GLU HA H N N 67 GLU HB2 H N N 68 GLU HB3 H N N 69 GLU HG2 H N N 70 GLU HG3 H N N 71 GLU HE2 H N N 72 GLU HXT H N N 73 GLY N N N N 74 GLY CA C N N 75 GLY C C N N 76 GLY O O N N 77 GLY OXT O N N 78 GLY H H N N 79 GLY H2 H N N 80 GLY HA2 H N N 81 GLY HA3 H N N 82 GLY HXT H N N 83 HIS N N N N 84 HIS CA C N S 85 HIS C C N N 86 HIS O O N N 87 HIS CB C N N 88 HIS CG C Y N 89 HIS ND1 N Y N 90 HIS CD2 C Y N 91 HIS CE1 C Y N 92 HIS NE2 N Y N 93 HIS OXT O N N 94 HIS H H N N 95 HIS H2 H N N 96 HIS HA H N N 97 HIS HB2 H N N 98 HIS HB3 H N N 99 HIS HD1 H N N 100 HIS HD2 H N N 101 HIS HE1 H N N 102 HIS HE2 H N N 103 HIS HXT H N N 104 HOH O O N N 105 HOH H1 H N N 106 HOH H2 H N N 107 ILE N N N N 108 ILE CA C N S 109 ILE C C N N 110 ILE O O N N 111 ILE CB C N S 112 ILE CG1 C N N 113 ILE CG2 C N N 114 ILE CD1 C N N 115 ILE OXT O N N 116 ILE H H N N 117 ILE H2 H N N 118 ILE HA H N N 119 ILE HB H N N 120 ILE HG12 H N N 121 ILE HG13 H N N 122 ILE HG21 H N N 123 ILE HG22 H N N 124 ILE HG23 H N N 125 ILE HD11 H N N 126 ILE HD12 H N N 127 ILE HD13 H N N 128 ILE HXT H N N 129 LEU N N N N 130 LEU CA C N S 131 LEU C C N N 132 LEU O O N N 133 LEU CB C N N 134 LEU CG C N N 135 LEU CD1 C N N 136 LEU CD2 C N N 137 LEU OXT O N N 138 LEU H H N N 139 LEU H2 H N N 140 LEU HA H N N 141 LEU HB2 H N N 142 LEU HB3 H N N 143 LEU HG H N N 144 LEU HD11 H N N 145 LEU HD12 H N N 146 LEU HD13 H N N 147 LEU HD21 H N N 148 LEU HD22 H N N 149 LEU HD23 H N N 150 LEU HXT H N N 151 LYS N N N N 152 LYS CA C N S 153 LYS C C N N 154 LYS O O N N 155 LYS CB C N N 156 LYS CG C N N 157 LYS CD C N N 158 LYS CE C N N 159 LYS NZ N N N 160 LYS OXT O N N 161 LYS H H N N 162 LYS H2 H N N 163 LYS HA H N N 164 LYS HB2 H N N 165 LYS HB3 H N N 166 LYS HG2 H N N 167 LYS HG3 H N N 168 LYS HD2 H N N 169 LYS HD3 H N N 170 LYS HE2 H N N 171 LYS HE3 H N N 172 LYS HZ1 H N N 173 LYS HZ2 H N N 174 LYS HZ3 H N N 175 LYS HXT H N N 176 MET N N N N 177 MET CA C N S 178 MET C C N N 179 MET O O N N 180 MET CB C N N 181 MET CG C N N 182 MET SD S N N 183 MET CE C N N 184 MET OXT O N N 185 MET H H N N 186 MET H2 H N N 187 MET HA H N N 188 MET HB2 H N N 189 MET HB3 H N N 190 MET HG2 H N N 191 MET HG3 H N N 192 MET HE1 H N N 193 MET HE2 H N N 194 MET HE3 H N N 195 MET HXT H N N 196 PHE N N N N 197 PHE CA C N S 198 PHE C C N N 199 PHE O O N N 200 PHE CB C N N 201 PHE CG C Y N 202 PHE CD1 C Y N 203 PHE CD2 C Y N 204 PHE CE1 C Y N 205 PHE CE2 C Y N 206 PHE CZ C Y N 207 PHE OXT O N N 208 PHE H H N N 209 PHE H2 H N N 210 PHE HA H N N 211 PHE HB2 H N N 212 PHE HB3 H N N 213 PHE HD1 H N N 214 PHE HD2 H N N 215 PHE HE1 H N N 216 PHE HE2 H N N 217 PHE HZ H N N 218 PHE HXT H N N 219 PRO N N N N 220 PRO CA C N S 221 PRO C C N N 222 PRO O O N N 223 PRO CB C N N 224 PRO CG C N N 225 PRO CD C N N 226 PRO OXT O N N 227 PRO H H N N 228 PRO HA H N N 229 PRO HB2 H N N 230 PRO HB3 H N N 231 PRO HG2 H N N 232 PRO HG3 H N N 233 PRO HD2 H N N 234 PRO HD3 H N N 235 PRO HXT H N N 236 THR N N N N 237 THR CA C N S 238 THR C C N N 239 THR O O N N 240 THR CB C N R 241 THR OG1 O N N 242 THR CG2 C N N 243 THR OXT O N N 244 THR H H N N 245 THR H2 H N N 246 THR HA H N N 247 THR HB H N N 248 THR HG1 H N N 249 THR HG21 H N N 250 THR HG22 H N N 251 THR HG23 H N N 252 THR HXT H N N 253 TRP N N N N 254 TRP CA C N S 255 TRP C C N N 256 TRP O O N N 257 TRP CB C N N 258 TRP CG C Y N 259 TRP CD1 C Y N 260 TRP CD2 C Y N 261 TRP NE1 N Y N 262 TRP CE2 C Y N 263 TRP CE3 C Y N 264 TRP CZ2 C Y N 265 TRP CZ3 C Y N 266 TRP CH2 C Y N 267 TRP OXT O N N 268 TRP H H N N 269 TRP H2 H N N 270 TRP HA H N N 271 TRP HB2 H N N 272 TRP HB3 H N N 273 TRP HD1 H N N 274 TRP HE1 H N N 275 TRP HE3 H N N 276 TRP HZ2 H N N 277 TRP HZ3 H N N 278 TRP HH2 H N N 279 TRP HXT H N N 280 TYR N N N N 281 TYR CA C N S 282 TYR C C N N 283 TYR O O N N 284 TYR CB C N N 285 TYR CG C Y N 286 TYR CD1 C Y N 287 TYR CD2 C Y N 288 TYR CE1 C Y N 289 TYR CE2 C Y N 290 TYR CZ C Y N 291 TYR OH O N N 292 TYR OXT O N N 293 TYR H H N N 294 TYR H2 H N N 295 TYR HA H N N 296 TYR HB2 H N N 297 TYR HB3 H N N 298 TYR HD1 H N N 299 TYR HD2 H N N 300 TYR HE1 H N N 301 TYR HE2 H N N 302 TYR HH H N N 303 TYR HXT H N N 304 VAL N N N N 305 VAL CA C N S 306 VAL C C N N 307 VAL O O N N 308 VAL CB C N N 309 VAL CG1 C N N 310 VAL CG2 C N N 311 VAL OXT O N N 312 VAL H H N N 313 VAL H2 H N N 314 VAL HA H N N 315 VAL HB H N N 316 VAL HG11 H N N 317 VAL HG12 H N N 318 VAL HG13 H N N 319 VAL HG21 H N N 320 VAL HG22 H N N 321 VAL HG23 H N N 322 VAL HXT H N N 323 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ASN N CA sing N N 20 ASN N H sing N N 21 ASN N H2 sing N N 22 ASN CA C sing N N 23 ASN CA CB sing N N 24 ASN CA HA sing N N 25 ASN C O doub N N 26 ASN C OXT sing N N 27 ASN CB CG sing N N 28 ASN CB HB2 sing N N 29 ASN CB HB3 sing N N 30 ASN CG OD1 doub N N 31 ASN CG ND2 sing N N 32 ASN ND2 HD21 sing N N 33 ASN ND2 HD22 sing N N 34 ASN OXT HXT sing N N 35 ASP N CA sing N N 36 ASP N H sing N N 37 ASP N H2 sing N N 38 ASP CA C sing N N 39 ASP CA CB sing N N 40 ASP CA HA sing N N 41 ASP C O doub N N 42 ASP C OXT sing N N 43 ASP CB CG sing N N 44 ASP CB HB2 sing N N 45 ASP CB HB3 sing N N 46 ASP CG OD1 doub N N 47 ASP CG OD2 sing N N 48 ASP OD2 HD2 sing N N 49 ASP OXT HXT sing N N 50 GLU N CA sing N N 51 GLU N H sing N N 52 GLU N H2 sing N N 53 GLU CA C sing N N 54 GLU CA CB sing N N 55 GLU CA HA sing N N 56 GLU C O doub N N 57 GLU C OXT sing N N 58 GLU CB CG sing N N 59 GLU CB HB2 sing N N 60 GLU CB HB3 sing N N 61 GLU CG CD sing N N 62 GLU CG HG2 sing N N 63 GLU CG HG3 sing N N 64 GLU CD OE1 doub N N 65 GLU CD OE2 sing N N 66 GLU OE2 HE2 sing N N 67 GLU OXT HXT sing N N 68 GLY N CA sing N N 69 GLY N H sing N N 70 GLY N H2 sing N N 71 GLY CA C sing N N 72 GLY CA HA2 sing N N 73 GLY CA HA3 sing N N 74 GLY C O doub N N 75 GLY C OXT sing N N 76 GLY OXT HXT sing N N 77 HIS N CA sing N N 78 HIS N H sing N N 79 HIS N H2 sing N N 80 HIS CA C sing N N 81 HIS CA CB sing N N 82 HIS CA HA sing N N 83 HIS C O doub N N 84 HIS C OXT sing N N 85 HIS CB CG sing N N 86 HIS CB HB2 sing N N 87 HIS CB HB3 sing N N 88 HIS CG ND1 sing Y N 89 HIS CG CD2 doub Y N 90 HIS ND1 CE1 doub Y N 91 HIS ND1 HD1 sing N N 92 HIS CD2 NE2 sing Y N 93 HIS CD2 HD2 sing N N 94 HIS CE1 NE2 sing Y N 95 HIS CE1 HE1 sing N N 96 HIS NE2 HE2 sing N N 97 HIS OXT HXT sing N N 98 HOH O H1 sing N N 99 HOH O H2 sing N N 100 ILE N CA sing N N 101 ILE N H sing N N 102 ILE N H2 sing N N 103 ILE CA C sing N N 104 ILE CA CB sing N N 105 ILE CA HA sing N N 106 ILE C O doub N N 107 ILE C OXT sing N N 108 ILE CB CG1 sing N N 109 ILE CB CG2 sing N N 110 ILE CB HB sing N N 111 ILE CG1 CD1 sing N N 112 ILE CG1 HG12 sing N N 113 ILE CG1 HG13 sing N N 114 ILE CG2 HG21 sing N N 115 ILE CG2 HG22 sing N N 116 ILE CG2 HG23 sing N N 117 ILE CD1 HD11 sing N N 118 ILE CD1 HD12 sing N N 119 ILE CD1 HD13 sing N N 120 ILE OXT HXT sing N N 121 LEU N CA sing N N 122 LEU N H sing N N 123 LEU N H2 sing N N 124 LEU CA C sing N N 125 LEU CA CB sing N N 126 LEU CA HA sing N N 127 LEU C O doub N N 128 LEU C OXT sing N N 129 LEU CB CG sing N N 130 LEU CB HB2 sing N N 131 LEU CB HB3 sing N N 132 LEU CG CD1 sing N N 133 LEU CG CD2 sing N N 134 LEU CG HG sing N N 135 LEU CD1 HD11 sing N N 136 LEU CD1 HD12 sing N N 137 LEU CD1 HD13 sing N N 138 LEU CD2 HD21 sing N N 139 LEU CD2 HD22 sing N N 140 LEU CD2 HD23 sing N N 141 LEU OXT HXT sing N N 142 LYS N CA sing N N 143 LYS N H sing N N 144 LYS N H2 sing N N 145 LYS CA C sing N N 146 LYS CA CB sing N N 147 LYS CA HA sing N N 148 LYS C O doub N N 149 LYS C OXT sing N N 150 LYS CB CG sing N N 151 LYS CB HB2 sing N N 152 LYS CB HB3 sing N N 153 LYS CG CD sing N N 154 LYS CG HG2 sing N N 155 LYS CG HG3 sing N N 156 LYS CD CE sing N N 157 LYS CD HD2 sing N N 158 LYS CD HD3 sing N N 159 LYS CE NZ sing N N 160 LYS CE HE2 sing N N 161 LYS CE HE3 sing N N 162 LYS NZ HZ1 sing N N 163 LYS NZ HZ2 sing N N 164 LYS NZ HZ3 sing N N 165 LYS OXT HXT sing N N 166 MET N CA sing N N 167 MET N H sing N N 168 MET N H2 sing N N 169 MET CA C sing N N 170 MET CA CB sing N N 171 MET CA HA sing N N 172 MET C O doub N N 173 MET C OXT sing N N 174 MET CB CG sing N N 175 MET CB HB2 sing N N 176 MET CB HB3 sing N N 177 MET CG SD sing N N 178 MET CG HG2 sing N N 179 MET CG HG3 sing N N 180 MET SD CE sing N N 181 MET CE HE1 sing N N 182 MET CE HE2 sing N N 183 MET CE HE3 sing N N 184 MET OXT HXT sing N N 185 PHE N CA sing N N 186 PHE N H sing N N 187 PHE N H2 sing N N 188 PHE CA C sing N N 189 PHE CA CB sing N N 190 PHE CA HA sing N N 191 PHE C O doub N N 192 PHE C OXT sing N N 193 PHE CB CG sing N N 194 PHE CB HB2 sing N N 195 PHE CB HB3 sing N N 196 PHE CG CD1 doub Y N 197 PHE CG CD2 sing Y N 198 PHE CD1 CE1 sing Y N 199 PHE CD1 HD1 sing N N 200 PHE CD2 CE2 doub Y N 201 PHE CD2 HD2 sing N N 202 PHE CE1 CZ doub Y N 203 PHE CE1 HE1 sing N N 204 PHE CE2 CZ sing Y N 205 PHE CE2 HE2 sing N N 206 PHE CZ HZ sing N N 207 PHE OXT HXT sing N N 208 PRO N CA sing N N 209 PRO N CD sing N N 210 PRO N H sing N N 211 PRO CA C sing N N 212 PRO CA CB sing N N 213 PRO CA HA sing N N 214 PRO C O doub N N 215 PRO C OXT sing N N 216 PRO CB CG sing N N 217 PRO CB HB2 sing N N 218 PRO CB HB3 sing N N 219 PRO CG CD sing N N 220 PRO CG HG2 sing N N 221 PRO CG HG3 sing N N 222 PRO CD HD2 sing N N 223 PRO CD HD3 sing N N 224 PRO OXT HXT sing N N 225 THR N CA sing N N 226 THR N H sing N N 227 THR N H2 sing N N 228 THR CA C sing N N 229 THR CA CB sing N N 230 THR CA HA sing N N 231 THR C O doub N N 232 THR C OXT sing N N 233 THR CB OG1 sing N N 234 THR CB CG2 sing N N 235 THR CB HB sing N N 236 THR OG1 HG1 sing N N 237 THR CG2 HG21 sing N N 238 THR CG2 HG22 sing N N 239 THR CG2 HG23 sing N N 240 THR OXT HXT sing N N 241 TRP N CA sing N N 242 TRP N H sing N N 243 TRP N H2 sing N N 244 TRP CA C sing N N 245 TRP CA CB sing N N 246 TRP CA HA sing N N 247 TRP C O doub N N 248 TRP C OXT sing N N 249 TRP CB CG sing N N 250 TRP CB HB2 sing N N 251 TRP CB HB3 sing N N 252 TRP CG CD1 doub Y N 253 TRP CG CD2 sing Y N 254 TRP CD1 NE1 sing Y N 255 TRP CD1 HD1 sing N N 256 TRP CD2 CE2 doub Y N 257 TRP CD2 CE3 sing Y N 258 TRP NE1 CE2 sing Y N 259 TRP NE1 HE1 sing N N 260 TRP CE2 CZ2 sing Y N 261 TRP CE3 CZ3 doub Y N 262 TRP CE3 HE3 sing N N 263 TRP CZ2 CH2 doub Y N 264 TRP CZ2 HZ2 sing N N 265 TRP CZ3 CH2 sing Y N 266 TRP CZ3 HZ3 sing N N 267 TRP CH2 HH2 sing N N 268 TRP OXT HXT sing N N 269 TYR N CA sing N N 270 TYR N H sing N N 271 TYR N H2 sing N N 272 TYR CA C sing N N 273 TYR CA CB sing N N 274 TYR CA HA sing N N 275 TYR C O doub N N 276 TYR C OXT sing N N 277 TYR CB CG sing N N 278 TYR CB HB2 sing N N 279 TYR CB HB3 sing N N 280 TYR CG CD1 doub Y N 281 TYR CG CD2 sing Y N 282 TYR CD1 CE1 sing Y N 283 TYR CD1 HD1 sing N N 284 TYR CD2 CE2 doub Y N 285 TYR CD2 HD2 sing N N 286 TYR CE1 CZ doub Y N 287 TYR CE1 HE1 sing N N 288 TYR CE2 CZ sing Y N 289 TYR CE2 HE2 sing N N 290 TYR CZ OH sing N N 291 TYR OH HH sing N N 292 TYR OXT HXT sing N N 293 VAL N CA sing N N 294 VAL N H sing N N 295 VAL N H2 sing N N 296 VAL CA C sing N N 297 VAL CA CB sing N N 298 VAL CA HA sing N N 299 VAL C O doub N N 300 VAL C OXT sing N N 301 VAL CB CG1 sing N N 302 VAL CB CG2 sing N N 303 VAL CB HB sing N N 304 VAL CG1 HG11 sing N N 305 VAL CG1 HG12 sing N N 306 VAL CG1 HG13 sing N N 307 VAL CG2 HG21 sing N N 308 VAL CG2 HG22 sing N N 309 VAL CG2 HG23 sing N N 310 VAL OXT HXT sing N N 311 # _pdbx_audit_support.funding_organization 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 18K04860 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETIC ACID' ACY 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ZW1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #