HEADER HYDROLASE 24-SEP-19 6KZN TITLE CRYSTAL STRUCTURE OF VIM-2 METALLO-BETA-LACTAMASE IN COMPLEX WITH TITLE 2 INHIBITOR X2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE CLASS B VIM-2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BLAVIM-2,METALLO BETA-LACTAMASE,METALLO-BETA-LACTAMASE VIM- COMPND 5 2,SUBCLASS B1 METALLO-BETA-LACTAMASE VIM-2,VIM-2,VIM-2 CLASS B BETA- COMPND 6 LACTAMASE,VIM-2 CLASS B METALLO B-LACTAMASE,VIM-2 METALLO-BETA- COMPND 7 LACTAMASE,VIM-2 TYPE METALLO-BETA-LACTAMASE; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLA VIM-2, BLA-VIM-2, BLASVIM-2, BLAVIM-2, BLAVIM2, VIM-2, SOURCE 5 VIM-2, IPC669_36195; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.WACHINO REVDAT 3 22-NOV-23 6KZN 1 REMARK REVDAT 2 01-SEP-21 6KZN 1 JRNL LINK REVDAT 1 19-FEB-20 6KZN 0 JRNL AUTH J.I.WACHINO,W.JIN,K.KIMURA,H.KUROSAKI,A.SATO,Y.ARAKAWA JRNL TITL SULFAMOYL HETEROARYLCARBOXYLIC ACIDS AS PROMISING JRNL TITL 2 METALLO-BETA-LACTAMASE INHIBITORS FOR CONTROLLING BACTERIAL JRNL TITL 3 CARBAPENEM RESISTANCE. JRNL REF MBIO V. 11 2020 JRNL REFN ESSN 2150-7511 JRNL PMID 32184250 JRNL DOI 10.1128/MBIO.03144-19 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 65267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.186 REMARK 3 FREE R VALUE TEST SET COUNT : 3385 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4591 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1540 REMARK 3 BIN FREE R VALUE SET COUNT : 221 REMARK 3 BIN FREE R VALUE : 0.1980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 567 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32500 REMARK 3 B22 (A**2) : -0.62100 REMARK 3 B33 (A**2) : 0.07900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00700 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.081 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3733 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3353 ; 0.000 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5112 ; 1.450 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7753 ; 1.425 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 483 ; 7.602 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 185 ;30.557 ;22.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 536 ;13.331 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;22.378 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 485 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4313 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 775 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 729 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.225 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1784 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 375 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.088 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1908 ; 1.361 ; 1.081 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1909 ; 1.364 ; 1.081 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2399 ; 2.098 ; 1.618 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2400 ; 2.099 ; 1.619 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1823 ; 2.180 ; 1.281 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1824 ; 2.180 ; 1.281 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2713 ; 3.222 ; 1.840 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2714 ; 3.222 ; 1.840 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6KZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300013931. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65271 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 55.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4NQ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM FORMATE DIHYDRATE, 25% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.98000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.57500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.98000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.57500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 27 REMARK 465 ASP A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 SER A 263 REMARK 465 VAL A 264 REMARK 465 VAL A 265 REMARK 465 GLU A 266 REMARK 465 VAL B 27 REMARK 465 ASP B 28 REMARK 465 SER B 29 REMARK 465 SER B 30 REMARK 465 SER B 263 REMARK 465 VAL B 264 REMARK 465 VAL B 265 REMARK 465 GLU B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 117 O HOH B 401 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 546 O HOH A 658 4556 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 84 148.46 75.69 REMARK 500 TRP A 87 77.16 68.88 REMARK 500 ALA A 178 -107.52 -151.52 REMARK 500 ASP B 84 149.17 74.74 REMARK 500 ALA B 86 31.41 -99.14 REMARK 500 TRP B 87 78.71 66.50 REMARK 500 ALA B 178 -104.53 -154.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 305 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 NE2 REMARK 620 2 HIS A 116 ND1 99.6 REMARK 620 3 HIS A 179 NE2 102.3 105.6 REMARK 620 4 E1C A 306 N2 116.1 111.2 119.7 REMARK 620 5 E1C A 306 S1 144.7 88.0 108.7 31.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 CYS A 198 SG 98.6 REMARK 620 3 HIS A 240 NE2 82.1 103.9 REMARK 620 4 E1C A 306 O3 158.2 103.1 91.4 REMARK 620 5 E1C A 306 N2 81.2 110.8 143.3 92.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 153 NE2 REMARK 620 2 HIS A 251 ND1 45.6 REMARK 620 3 FMT A 303 O2 126.8 93.4 REMARK 620 4 FMT A 304 O2 113.0 93.0 98.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 114 NE2 REMARK 620 2 HIS B 116 ND1 99.7 REMARK 620 3 HIS B 179 NE2 102.7 106.8 REMARK 620 4 E1C B 306 S1 143.2 89.6 108.4 REMARK 620 5 E1C B 306 N2 115.3 112.1 118.1 30.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 118 OD2 REMARK 620 2 CYS B 198 SG 99.7 REMARK 620 3 HIS B 240 NE2 82.3 103.6 REMARK 620 4 E1C B 306 O4 157.5 102.7 90.5 REMARK 620 5 E1C B 306 N2 81.7 113.1 141.9 91.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 153 NE2 REMARK 620 2 HIS B 251 ND1 48.4 REMARK 620 3 FMT B 304 O2 131.7 94.1 REMARK 620 4 FMT B 305 O2 103.7 81.6 97.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E1C A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E1C B 306 DBREF 6KZN A 27 266 UNP Q9K2N0 Q9K2N0_PSEAI 27 266 DBREF 6KZN B 27 266 UNP Q9K2N0 Q9K2N0_PSEAI 27 266 SEQRES 1 A 240 VAL ASP SER SER GLY GLU TYR PRO THR VAL SER GLU ILE SEQRES 2 A 240 PRO VAL GLY GLU VAL ARG LEU TYR GLN ILE ALA ASP GLY SEQRES 3 A 240 VAL TRP SER HIS ILE ALA THR GLN SER PHE ASP GLY ALA SEQRES 4 A 240 VAL TYR PRO SER ASN GLY LEU ILE VAL ARG ASP GLY ASP SEQRES 5 A 240 GLU LEU LEU LEU ILE ASP THR ALA TRP GLY ALA LYS ASN SEQRES 6 A 240 THR ALA ALA LEU LEU ALA GLU ILE GLU LYS GLN ILE GLY SEQRES 7 A 240 LEU PRO VAL THR ARG ALA VAL SER THR HIS PHE HIS ASP SEQRES 8 A 240 ASP ARG VAL GLY GLY VAL ASP VAL LEU ARG ALA ALA GLY SEQRES 9 A 240 VAL ALA THR TYR ALA SER PRO SER THR ARG ARG LEU ALA SEQRES 10 A 240 GLU VAL GLU GLY ASN GLU ILE PRO THR HIS SER LEU GLU SEQRES 11 A 240 GLY LEU SER SER SER GLY ASP ALA VAL ARG PHE GLY PRO SEQRES 12 A 240 VAL GLU LEU PHE TYR PRO GLY ALA ALA HIS SER THR ASP SEQRES 13 A 240 ASN LEU VAL VAL TYR VAL PRO SER ALA SER VAL LEU TYR SEQRES 14 A 240 GLY GLY CYS ALA ILE TYR GLU LEU SER ARG THR SER ALA SEQRES 15 A 240 GLY ASN VAL ALA ASP ALA ASP LEU ALA GLU TRP PRO THR SEQRES 16 A 240 SER ILE GLU ARG ILE GLN GLN HIS TYR PRO GLU ALA GLN SEQRES 17 A 240 PHE VAL ILE PRO GLY HIS GLY LEU PRO GLY GLY LEU ASP SEQRES 18 A 240 LEU LEU LYS HIS THR THR ASN VAL VAL LYS ALA HIS THR SEQRES 19 A 240 ASN ARG SER VAL VAL GLU SEQRES 1 B 240 VAL ASP SER SER GLY GLU TYR PRO THR VAL SER GLU ILE SEQRES 2 B 240 PRO VAL GLY GLU VAL ARG LEU TYR GLN ILE ALA ASP GLY SEQRES 3 B 240 VAL TRP SER HIS ILE ALA THR GLN SER PHE ASP GLY ALA SEQRES 4 B 240 VAL TYR PRO SER ASN GLY LEU ILE VAL ARG ASP GLY ASP SEQRES 5 B 240 GLU LEU LEU LEU ILE ASP THR ALA TRP GLY ALA LYS ASN SEQRES 6 B 240 THR ALA ALA LEU LEU ALA GLU ILE GLU LYS GLN ILE GLY SEQRES 7 B 240 LEU PRO VAL THR ARG ALA VAL SER THR HIS PHE HIS ASP SEQRES 8 B 240 ASP ARG VAL GLY GLY VAL ASP VAL LEU ARG ALA ALA GLY SEQRES 9 B 240 VAL ALA THR TYR ALA SER PRO SER THR ARG ARG LEU ALA SEQRES 10 B 240 GLU VAL GLU GLY ASN GLU ILE PRO THR HIS SER LEU GLU SEQRES 11 B 240 GLY LEU SER SER SER GLY ASP ALA VAL ARG PHE GLY PRO SEQRES 12 B 240 VAL GLU LEU PHE TYR PRO GLY ALA ALA HIS SER THR ASP SEQRES 13 B 240 ASN LEU VAL VAL TYR VAL PRO SER ALA SER VAL LEU TYR SEQRES 14 B 240 GLY GLY CYS ALA ILE TYR GLU LEU SER ARG THR SER ALA SEQRES 15 B 240 GLY ASN VAL ALA ASP ALA ASP LEU ALA GLU TRP PRO THR SEQRES 16 B 240 SER ILE GLU ARG ILE GLN GLN HIS TYR PRO GLU ALA GLN SEQRES 17 B 240 PHE VAL ILE PRO GLY HIS GLY LEU PRO GLY GLY LEU ASP SEQRES 18 B 240 LEU LEU LYS HIS THR THR ASN VAL VAL LYS ALA HIS THR SEQRES 19 B 240 ASN ARG SER VAL VAL GLU HET ZN A 301 1 HET ZN A 302 1 HET FMT A 303 3 HET FMT A 304 3 HET ZN A 305 1 HET E1C A 306 17 HET ZN B 301 1 HET ZN B 302 1 HET ZN B 303 1 HET FMT B 304 3 HET FMT B 305 3 HET E1C B 306 17 HETNAM ZN ZINC ION HETNAM FMT FORMIC ACID HETNAM E1C 2,5-DIETHYL-1-METHYL-4-SULFAMOYL-PYRROLE-3-CARBOXYLIC HETNAM 2 E1C ACID FORMUL 3 ZN 6(ZN 2+) FORMUL 5 FMT 4(C H2 O2) FORMUL 8 E1C 2(C10 H16 N2 O4 S) FORMUL 15 HOH *567(H2 O) HELIX 1 AA1 THR A 35 ILE A 39 5 5 HELIX 2 AA2 GLY A 88 ILE A 103 1 16 HELIX 3 AA3 HIS A 116 GLY A 121 1 6 HELIX 4 AA4 GLY A 122 ALA A 129 1 8 HELIX 5 AA5 SER A 136 GLY A 147 1 12 HELIX 6 AA6 CYS A 198 ILE A 200 5 3 HELIX 7 AA7 GLU A 218 TYR A 230 1 13 HELIX 8 AA8 LEU A 246 ASN A 261 1 16 HELIX 9 AA9 THR B 35 ILE B 39 5 5 HELIX 10 AB1 GLY B 88 ILE B 103 1 16 HELIX 11 AB2 HIS B 116 GLY B 121 1 6 HELIX 12 AB3 GLY B 122 ALA B 129 1 8 HELIX 13 AB4 SER B 136 GLY B 147 1 12 HELIX 14 AB5 CYS B 198 ILE B 200 5 3 HELIX 15 AB6 GLU B 218 TYR B 230 1 13 HELIX 16 AB7 LEU B 246 ASN B 261 1 16 SHEET 1 AA1 7 ARG A 45 ALA A 50 0 SHEET 2 AA1 7 VAL A 53 PHE A 62 -1 O ILE A 57 N ARG A 45 SHEET 3 AA1 7 ALA A 65 ASP A 76 -1 O ALA A 65 N PHE A 62 SHEET 4 AA1 7 GLU A 79 ILE A 83 -1 O GLU A 79 N ASP A 76 SHEET 5 AA1 7 VAL A 107 VAL A 111 1 O ARG A 109 N LEU A 82 SHEET 6 AA1 7 ALA A 132 ALA A 135 1 O TYR A 134 N ALA A 110 SHEET 7 AA1 7 HIS A 153 SER A 154 1 O HIS A 153 N THR A 133 SHEET 1 AA2 5 ASP A 163 PHE A 167 0 SHEET 2 AA2 5 VAL A 170 TYR A 174 -1 O LEU A 172 N VAL A 165 SHEET 3 AA2 5 VAL A 185 VAL A 188 -1 O TYR A 187 N GLU A 171 SHEET 4 AA2 5 VAL A 193 GLY A 197 -1 O TYR A 195 N VAL A 186 SHEET 5 AA2 5 PHE A 235 PRO A 238 1 O PHE A 235 N LEU A 194 SHEET 1 AA3 7 ARG B 45 ALA B 50 0 SHEET 2 AA3 7 VAL B 53 PHE B 62 -1 O ILE B 57 N ARG B 45 SHEET 3 AA3 7 ALA B 65 ASP B 76 -1 O ALA B 65 N PHE B 62 SHEET 4 AA3 7 GLU B 79 ILE B 83 -1 O GLU B 79 N ASP B 76 SHEET 5 AA3 7 VAL B 107 VAL B 111 1 O ARG B 109 N LEU B 82 SHEET 6 AA3 7 ALA B 132 ALA B 135 1 O TYR B 134 N ALA B 110 SHEET 7 AA3 7 HIS B 153 SER B 154 1 O HIS B 153 N THR B 133 SHEET 1 AA4 5 ASP B 163 PHE B 167 0 SHEET 2 AA4 5 VAL B 170 TYR B 174 -1 O LEU B 172 N VAL B 165 SHEET 3 AA4 5 VAL B 185 VAL B 188 -1 O TYR B 187 N GLU B 171 SHEET 4 AA4 5 VAL B 193 GLY B 197 -1 O TYR B 195 N VAL B 186 SHEET 5 AA4 5 PHE B 235 PRO B 238 1 O PHE B 235 N LEU B 194 LINK NE2 HIS A 114 ZN ZN A 305 1555 1555 2.04 LINK ND1 HIS A 116 ZN ZN A 305 1555 1555 2.04 LINK OD2 ASP A 118 ZN ZN A 301 1555 1555 2.29 LINK NE2 HIS A 153 ZN ZN A 302 1555 1555 1.99 LINK NE2 HIS A 179 ZN ZN A 305 1555 1555 2.00 LINK SG CYS A 198 ZN ZN A 301 1555 1555 2.29 LINK NE2 HIS A 240 ZN ZN A 301 1555 1555 2.06 LINK ND1 HIS A 251 ZN ZN A 302 1555 4546 2.07 LINK ZN ZN A 301 O3 E1C A 306 1555 1555 2.20 LINK ZN ZN A 301 N2 E1C A 306 1555 1555 2.18 LINK ZN ZN A 302 O2 FMT A 303 1555 1555 1.90 LINK ZN ZN A 302 O2 FMT A 304 1555 1555 1.89 LINK ZN ZN A 305 N2 E1C A 306 1555 1555 1.97 LINK ZN ZN A 305 S1 E1C A 306 1555 1555 2.92 LINK NE2 HIS B 114 ZN ZN B 303 1555 1555 2.06 LINK ND1 HIS B 116 ZN ZN B 303 1555 1555 2.07 LINK OD2 ASP B 118 ZN ZN B 301 1555 1555 2.29 LINK NE2 HIS B 153 ZN ZN B 302 1555 1555 1.98 LINK NE2 HIS B 179 ZN ZN B 303 1555 1555 2.03 LINK SG CYS B 198 ZN ZN B 301 1555 1555 2.30 LINK NE2 HIS B 240 ZN ZN B 301 1555 1555 2.09 LINK ND1 HIS B 251 ZN ZN B 302 1555 4657 2.02 LINK ZN ZN B 301 O4 E1C B 306 1555 1555 2.23 LINK ZN ZN B 301 N2 E1C B 306 1555 1555 2.20 LINK ZN ZN B 302 O2 FMT B 304 1555 1555 1.90 LINK ZN ZN B 302 O2 FMT B 305 1555 1555 1.85 LINK ZN ZN B 303 S1 E1C B 306 1555 1555 2.93 LINK ZN ZN B 303 N2 E1C B 306 1555 1555 1.97 SITE 1 AC1 5 ASP A 118 CYS A 198 HIS A 240 ZN A 305 SITE 2 AC1 5 E1C A 306 SITE 1 AC2 4 HIS A 153 HIS A 251 FMT A 303 FMT A 304 SITE 1 AC3 8 ALA A 132 HIS A 153 HIS A 251 ASN A 254 SITE 2 AC3 8 ZN A 302 FMT A 304 HOH A 427 HOH A 503 SITE 1 AC4 8 ALA A 132 THR A 133 THR A 152 HIS A 153 SITE 2 AC4 8 HIS A 251 ZN A 302 FMT A 303 HOH A 432 SITE 1 AC5 5 HIS A 114 HIS A 116 HIS A 179 ZN A 301 SITE 2 AC5 5 E1C A 306 SITE 1 AC6 15 PHE A 62 TYR A 67 HIS A 114 HIS A 116 SITE 2 AC6 15 ASP A 118 HIS A 179 CYS A 198 GLY A 209 SITE 3 AC6 15 ASN A 210 HIS A 240 ZN A 301 ZN A 305 SITE 4 AC6 15 HOH A 455 HOH A 529 HOH A 554 SITE 1 AC7 5 ASP B 118 CYS B 198 HIS B 240 ZN B 303 SITE 2 AC7 5 E1C B 306 SITE 1 AC8 4 HIS B 153 HIS B 251 FMT B 304 FMT B 305 SITE 1 AC9 5 HIS B 114 HIS B 116 HIS B 179 ZN B 301 SITE 2 AC9 5 E1C B 306 SITE 1 AD1 8 ALA B 132 HIS B 153 HIS B 251 ASN B 254 SITE 2 AD1 8 ZN B 302 FMT B 305 HOH B 418 HOH B 525 SITE 1 AD2 9 THR B 152 HIS B 153 HIS B 251 ASN B 254 SITE 2 AD2 9 ZN B 302 FMT B 304 HOH B 455 HOH B 468 SITE 3 AD2 9 HOH B 486 SITE 1 AD3 15 TYR B 67 TRP B 87 HIS B 114 HIS B 116 SITE 2 AD3 15 ASP B 118 HIS B 179 CYS B 198 GLY B 209 SITE 3 AD3 15 ASN B 210 HIS B 240 ZN B 301 ZN B 303 SITE 4 AD3 15 HOH B 466 HOH B 501 HOH B 503 CRYST1 101.960 79.150 77.740 90.00 138.40 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009808 0.000000 0.011047 0.00000 SCALE2 0.000000 0.012634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019375 0.00000