HEADER TRANSCRIPTION 24-OCT-19 6L5K TITLE ARF5 AUX/IAA17 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUXIN RESPONSE FACTOR 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AUXIN-RESPONSIVE PROTEIN IAA24,TRANSCRIPTION FACTOR COMPND 5 MONOPTEROS; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: AUXIN-RESPONSIVE PROTEIN IAA17; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: AUXIN RESPONSE 3,INDOLEACETIC ACID-INDUCED PROTEIN 17; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ARF5, IAA24, MP, AT1G19850, F6F9.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 10 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 11 ORGANISM_TAXID: 3702; SOURCE 12 GENE: IAA17, AXR3, AT1G04250, F19P19.31; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AUXIN, AUXIN RESPONSE FACTOR, AUX/IAA, COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.S.RYU,J.Y.SUH,S.Y.CHA,Y.I.KIM,C.K.PARK REVDAT 2 22-NOV-23 6L5K 1 REMARK REVDAT 1 02-SEP-20 6L5K 0 JRNL AUTH Y.KIM,C.PARK,S.CHA,M.HAN,K.S.RYU,J.Y.SUH JRNL TITL DETERMINANTS OF PB1 DOMAIN INTERACTIONS IN AUXIN RESPONSE JRNL TITL 2 FACTOR ARF5 AND REPRESSOR IAA17. JRNL REF J.MOL.BIOL. V. 432 4010 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 32305460 JRNL DOI 10.1016/J.JMB.2020.04.007 REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.530 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 8596 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.7300 - 5.2800 0.99 1409 157 0.2061 0.2401 REMARK 3 2 5.2800 - 4.1900 0.99 1305 145 0.1717 0.2136 REMARK 3 3 4.1900 - 3.6600 0.98 1276 142 0.1974 0.2654 REMARK 3 4 3.6600 - 3.3300 0.99 1265 140 0.2565 0.3231 REMARK 3 5 3.3300 - 3.0900 0.97 1256 140 0.3198 0.3372 REMARK 3 6 3.0900 - 2.9100 0.96 1225 136 0.3752 0.4134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.564 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1412 REMARK 3 ANGLE : 1.158 1908 REMARK 3 CHIRALITY : 0.060 206 REMARK 3 PLANARITY : 0.006 240 REMARK 3 DIHEDRAL : 7.443 839 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 792 THROUGH 800 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7358 -12.7345 -19.4245 REMARK 3 T TENSOR REMARK 3 T11: 1.6018 T22: 0.8667 REMARK 3 T33: 0.6700 T12: -0.0221 REMARK 3 T13: -0.2278 T23: -0.1607 REMARK 3 L TENSOR REMARK 3 L11: 8.7809 L22: 4.6300 REMARK 3 L33: 4.2668 L12: -0.5342 REMARK 3 L13: 2.0639 L23: -1.4925 REMARK 3 S TENSOR REMARK 3 S11: 0.1159 S12: -1.1782 S13: 0.1666 REMARK 3 S21: 0.6122 S22: 1.5403 S23: 1.7782 REMARK 3 S31: 0.0625 S32: -2.6078 S33: 0.5921 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 801 THROUGH 827 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4269 -9.4614 -21.2149 REMARK 3 T TENSOR REMARK 3 T11: 1.1624 T22: 0.6572 REMARK 3 T33: 0.4773 T12: 0.3028 REMARK 3 T13: -0.3265 T23: -0.1446 REMARK 3 L TENSOR REMARK 3 L11: 8.1496 L22: 1.5506 REMARK 3 L33: 7.9525 L12: 1.6382 REMARK 3 L13: 2.9508 L23: 1.5633 REMARK 3 S TENSOR REMARK 3 S11: 0.9975 S12: -1.0196 S13: -1.6903 REMARK 3 S21: -0.4316 S22: 0.1700 S23: -0.3606 REMARK 3 S31: 1.5407 S32: -0.1891 S33: -0.1540 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 828 THROUGH 841 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3415 1.6023 -25.7928 REMARK 3 T TENSOR REMARK 3 T11: 1.2251 T22: 0.7869 REMARK 3 T33: 0.4566 T12: -0.0851 REMARK 3 T13: -0.2874 T23: 0.1411 REMARK 3 L TENSOR REMARK 3 L11: 2.2732 L22: 3.1467 REMARK 3 L33: 4.6849 L12: 1.5247 REMARK 3 L13: 1.0662 L23: 3.4839 REMARK 3 S TENSOR REMARK 3 S11: -0.7784 S12: -1.5883 S13: -1.5389 REMARK 3 S21: 2.1398 S22: 1.3865 S23: -0.5772 REMARK 3 S31: -0.3106 S32: 0.2155 S33: -0.2680 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 842 THROUGH 883 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7436 0.4801 -17.3839 REMARK 3 T TENSOR REMARK 3 T11: 0.7082 T22: 0.6775 REMARK 3 T33: 0.3615 T12: 0.0123 REMARK 3 T13: -0.1296 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 4.4762 L22: 9.5105 REMARK 3 L33: 3.6752 L12: 0.0205 REMARK 3 L13: 0.2101 L23: -1.2062 REMARK 3 S TENSOR REMARK 3 S11: 0.2077 S12: -0.8338 S13: 0.0159 REMARK 3 S21: 0.6299 S22: 0.0993 S23: 0.4396 REMARK 3 S31: 0.5520 S32: -0.1867 S33: -0.4951 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1780 12.5201 -8.2352 REMARK 3 T TENSOR REMARK 3 T11: 0.9725 T22: 0.9813 REMARK 3 T33: 0.3364 T12: -0.1090 REMARK 3 T13: -0.0008 T23: -0.1348 REMARK 3 L TENSOR REMARK 3 L11: 4.1525 L22: 6.0730 REMARK 3 L33: 8.1901 L12: -1.4229 REMARK 3 L13: 0.1958 L23: 1.9478 REMARK 3 S TENSOR REMARK 3 S11: 0.4564 S12: -0.0528 S13: 0.2840 REMARK 3 S21: -0.5267 S22: -0.4568 S23: -0.6296 REMARK 3 S31: -0.2006 S32: 1.6877 S33: -0.2411 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8071 23.5346 -15.6728 REMARK 3 T TENSOR REMARK 3 T11: 0.6515 T22: 0.6409 REMARK 3 T33: 1.2493 T12: 0.0165 REMARK 3 T13: 0.9048 T23: 0.7864 REMARK 3 L TENSOR REMARK 3 L11: 5.4199 L22: 1.6783 REMARK 3 L33: 5.3152 L12: 1.5971 REMARK 3 L13: -5.2336 L23: -1.3354 REMARK 3 S TENSOR REMARK 3 S11: -1.1864 S12: 3.2270 S13: -0.3869 REMARK 3 S21: -0.3781 S22: -1.4419 S23: -1.4261 REMARK 3 S31: 0.0588 S32: 1.2964 S33: -1.6008 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4701 15.2565 -0.7438 REMARK 3 T TENSOR REMARK 3 T11: 0.8465 T22: 1.1467 REMARK 3 T33: 0.5237 T12: 0.1025 REMARK 3 T13: 0.0681 T23: -0.3009 REMARK 3 L TENSOR REMARK 3 L11: 6.5645 L22: 8.0518 REMARK 3 L33: 2.2045 L12: -1.8048 REMARK 3 L13: -1.3231 L23: 0.7918 REMARK 3 S TENSOR REMARK 3 S11: -0.1936 S12: -1.0437 S13: 0.1091 REMARK 3 S21: 1.1931 S22: 0.3602 S23: 0.6544 REMARK 3 S31: -0.0023 S32: -0.6933 S33: 0.2914 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L5K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8612 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 43.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.01 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4CHK,2MUK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PH 8.5, LIQUID REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.01250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.94700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.94700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.00625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.94700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.94700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.01875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.94700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.94700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.00625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.94700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.94700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.01875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.01250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 788 REMARK 465 THR A 789 REMARK 465 PRO A 790 REMARK 465 ARG A 791 REMARK 465 GLU A 884 REMARK 465 GLY A 885 REMARK 465 GLY B 105 REMARK 465 GLY B 106 REMARK 465 PRO B 107 REMARK 465 GLU B 108 REMARK 465 LYS B 152 REMARK 465 HIS B 153 REMARK 465 GLY B 154 REMARK 465 GLY B 155 REMARK 465 GLU B 156 REMARK 465 GLU B 157 REMARK 465 GLY B 158 REMARK 465 MET B 159 REMARK 465 ILE B 160 REMARK 465 ASP B 161 REMARK 465 PHE B 162 REMARK 465 MET B 163 REMARK 465 ASN B 164 REMARK 465 GLU B 165 REMARK 465 ARG B 166 REMARK 465 LYS B 167 REMARK 465 LEU B 168 REMARK 465 MET B 169 REMARK 465 ASP B 170 REMARK 465 LEU B 171 REMARK 465 VAL B 172 REMARK 465 ASN B 173 REMARK 465 SER B 212 REMARK 465 ASP B 213 REMARK 465 ALA B 214 REMARK 465 ILE B 215 REMARK 465 GLY B 216 REMARK 465 LEU B 217 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN A 879 OE1 GLN A 879 8554 1.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 879 CA - CB - CG ANGL. DEV. = -13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 834 76.28 -119.60 REMARK 500 SER A 838 71.48 62.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 6L5K A 788 885 UNP P93024 ARFE_ARATH 788 885 DBREF 6L5K B 105 217 UNP P93830 IAA17_ARATH 105 217 SEQADV 6L5K GLY A 788 UNP P93024 ALA 788 ENGINEERED MUTATION SEQADV 6L5K ASP A 797 UNP P93024 LYS 797 ENGINEERED MUTATION SEQADV 6L5K SER A 825 UNP P93024 CYS 825 ENGINEERED MUTATION SEQADV 6L5K SER A 866 UNP P93024 CYS 866 ENGINEERED MUTATION SEQADV 6L5K SER A 869 UNP P93024 CYS 869 ENGINEERED MUTATION SEQADV 6L5K ASN B 183 UNP P93830 ASP 183 ENGINEERED MUTATION SEQADV 6L5K ASN B 187 UNP P93830 ASP 187 ENGINEERED MUTATION SEQADV 6L5K ALA B 203 UNP P93830 CYS 203 ENGINEERED MUTATION SEQRES 1 A 98 GLY THR PRO ARG VAL ARG THR TYR THR ASP VAL GLN LYS SEQRES 2 A 98 THR GLY SER VAL GLY ARG SER ILE ASP VAL THR SER PHE SEQRES 3 A 98 LYS ASP TYR GLU GLU LEU LYS SER ALA ILE GLU SER MET SEQRES 4 A 98 PHE GLY LEU GLU GLY LEU LEU THR HIS PRO GLN SER SER SEQRES 5 A 98 GLY TRP LYS LEU VAL TYR VAL ASP TYR GLU SER ASP VAL SEQRES 6 A 98 LEU LEU VAL GLY ASP ASP PRO TRP GLU GLU PHE VAL GLY SEQRES 7 A 98 SER VAL ARG SER ILE ARG ILE LEU SER PRO THR GLU VAL SEQRES 8 A 98 GLN GLN MET SER GLU GLU GLY SEQRES 1 B 113 GLY GLY PRO GLU ALA ALA ALA PHE VAL LYS VAL SER MET SEQRES 2 B 113 ASP GLY ALA PRO TYR LEU ARG LYS ILE ASP LEU ARG MET SEQRES 3 B 113 TYR LYS SER TYR ASP GLU LEU SER ASN ALA LEU SER ASN SEQRES 4 B 113 MET PHE SER SER PHE THR MET GLY LYS HIS GLY GLY GLU SEQRES 5 B 113 GLU GLY MET ILE ASP PHE MET ASN GLU ARG LYS LEU MET SEQRES 6 B 113 ASP LEU VAL ASN SER TRP ASP TYR VAL PRO SER TYR GLU SEQRES 7 B 113 ASN LYS ASP GLY ASN TRP MET LEU VAL GLY ASP VAL PRO SEQRES 8 B 113 TRP PRO MET PHE VAL ASP THR ALA LYS ARG LEU ARG LEU SEQRES 9 B 113 MET LYS GLY SER ASP ALA ILE GLY LEU FORMUL 3 HOH *15(H2 O) HELIX 1 AA1 ASP A 809 PHE A 813 5 5 HELIX 2 AA2 ASP A 815 PHE A 827 1 13 HELIX 3 AA3 PRO A 859 SER A 866 1 8 HELIX 4 AA4 THR A 876 SER A 882 1 7 HELIX 5 AA5 ARG B 129 TYR B 131 5 3 HELIX 6 AA6 SER B 133 PHE B 145 1 13 HELIX 7 AA7 PHE B 145 MET B 150 1 6 HELIX 8 AA8 PRO B 195 ALA B 203 1 9 SHEET 1 AA1 5 ARG A 806 ILE A 808 0 SHEET 2 AA1 5 THR A 796 LYS A 800 -1 N VAL A 798 O ARG A 806 SHEET 3 AA1 5 VAL A 867 LEU A 873 1 O ILE A 870 N ASP A 797 SHEET 4 AA1 5 LYS A 842 ASP A 847 -1 N VAL A 846 O SER A 869 SHEET 5 AA1 5 VAL A 852 LEU A 854 -1 O LEU A 853 N TYR A 845 SHEET 1 AA2 5 ARG B 124 ASP B 127 0 SHEET 2 AA2 5 PHE B 112 MET B 117 -1 N VAL B 115 O ARG B 124 SHEET 3 AA2 5 LEU B 206 LYS B 210 1 O LEU B 206 N LYS B 114 SHEET 4 AA2 5 TYR B 177 GLU B 182 -1 N SER B 180 O ARG B 207 SHEET 5 AA2 5 TRP B 188 LEU B 190 -1 O MET B 189 N TYR B 181 CRYST1 79.894 79.894 116.025 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008619 0.00000