HEADER OXIDOREDUCTASE 29-OCT-19 6L6J TITLE STRUCTURE OF 6-HYDROXYPSEUDOOXYNICOTINE (6-HPON) AMINE OXIDASE (HISD) TITLE 2 FROM PSEUDOMONAS GENICULATA N1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDORED_FMN DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: [PSEUDOMONAS] GENICULATA N1; SOURCE 3 ORGANISM_TAXID: 1167641; SOURCE 4 GENE: W7K_00670; SOURCE 5 EXPRESSION_SYSTEM: PSEUDOMONAS PUTIDA KT2440; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 160488 KEYWDS AMINE OXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.Q.LIU,H.Z.TANG REVDAT 2 22-NOV-23 6L6J 1 REMARK REVDAT 1 12-AUG-20 6L6J 0 JRNL AUTH G.Q.LIU,H.Z.TANG JRNL TITL STRUCTURE OF 6-HYDROXYPSEUDOOXYNICOTINE (6-HPON) AMINE JRNL TITL 2 OXIDASE (HISD) FROM PSEUDOMONAS GENICULATA N1 JRNL REF APPL.ENVIRON.MICROBIOL. 2020 JRNL REFN ESSN 1098-5336 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1479 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2035 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5157 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.382 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.234 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.917 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5367 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4898 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7317 ; 1.501 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11304 ; 1.365 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 668 ; 7.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 301 ;31.402 ;20.598 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 838 ;17.754 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;20.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 690 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6090 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1173 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6L6J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29678 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.16400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.60100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3K30 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M AMMONIUM SULFATE 0.1 M SODIUM REMARK 280 CITRATE DIHYDRATE PH 5.6 1.0 M LITHIUM SULFATE MONOHYDRATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 57.55500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 106.45100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 57.55500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 106.45100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 57.55500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 106.45100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 57.55500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 106.45100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 670 REMARK 465 VAL A 671 REMARK 465 GLU A 672 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 839 O HOH A 907 1.91 REMARK 500 O HOH A 888 O HOH A 904 1.99 REMARK 500 O GLY A 420 O LEU A 460 2.05 REMARK 500 OG SER A 358 O HOH A 801 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 SO4 A 704 O2 SO4 A 704 3656 1.20 REMARK 500 S SO4 A 704 O2 SO4 A 704 3656 1.25 REMARK 500 S SO4 A 704 O1 SO4 A 704 3656 1.26 REMARK 500 O2 SO4 A 704 O4 SO4 A 704 3656 1.63 REMARK 500 O1 SO4 A 704 O3 SO4 A 704 3656 1.74 REMARK 500 S SO4 A 704 O3 SO4 A 704 3656 1.76 REMARK 500 O1 SO4 A 704 O4 SO4 A 704 3656 1.80 REMARK 500 S SO4 A 704 O4 SO4 A 704 3656 1.80 REMARK 500 O2 SO4 A 704 O3 SO4 A 704 3656 1.89 REMARK 500 O3 SO4 A 704 O3 SO4 A 704 3656 2.00 REMARK 500 OE2 GLU A 240 OE2 GLU A 240 3656 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 59 -172.59 -69.72 REMARK 500 ALA A 109 40.60 -101.46 REMARK 500 ARG A 117 60.71 38.69 REMARK 500 HIS A 173 6.85 55.53 REMARK 500 GLU A 240 -107.27 -104.99 REMARK 500 ASP A 262 125.45 80.65 REMARK 500 THR A 300 -37.11 -133.75 REMARK 500 ALA A 320 -73.35 -118.01 REMARK 500 PRO A 327 -19.58 -46.86 REMARK 500 ARG A 359 132.71 -30.42 REMARK 500 ASN A 386 84.75 49.60 REMARK 500 ASP A 461 47.06 -140.96 REMARK 500 ARG A 492 -80.82 -128.46 REMARK 500 TYR A 530 8.04 83.54 REMARK 500 TYR A 531 -136.04 -116.03 REMARK 500 SER A 593 15.52 -149.18 REMARK 500 ALA A 610 105.73 -165.28 REMARK 500 ARG A 633 106.30 -59.31 REMARK 500 LEU A 638 65.80 34.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 702 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 344 SG REMARK 620 2 SF4 A 702 S1 142.0 REMARK 620 3 SF4 A 702 S3 106.1 88.7 REMARK 620 4 SF4 A 702 S4 124.1 89.8 90.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 702 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 347 SG REMARK 620 2 SF4 A 702 S2 105.3 REMARK 620 3 SF4 A 702 S3 124.8 86.7 REMARK 620 4 SF4 A 702 S4 142.2 89.8 89.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 702 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 350 SG REMARK 620 2 SF4 A 702 S1 127.6 REMARK 620 3 SF4 A 702 S2 123.2 90.0 REMARK 620 4 SF4 A 702 S3 126.0 90.8 87.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 702 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 362 SG REMARK 620 2 SF4 A 702 S1 120.0 REMARK 620 3 SF4 A 702 S2 131.4 88.4 REMARK 620 4 SF4 A 702 S4 124.2 90.8 90.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 707 DBREF1 6L6J A 1 672 UNP A0A0L8AFM7_9GAMM DBREF2 6L6J A A0A0L8AFM7 3 674 SEQRES 1 A 672 MET ARG ASP PRO ARG TYR ASP ILE LEU PHE GLU PRO VAL SEQRES 2 A 672 GLN ILE GLY PRO VAL THR THR LYS ASN ARG PHE TYR VAL SEQRES 3 A 672 VAL PRO HIS ALA THR ALA MET GLY MET THR ALA LEU GLU SEQRES 4 A 672 GLU MET ILE ALA PHE ARG LYS ALA ARG ALA GLU GLY GLY SEQRES 5 A 672 TRP GLY VAL VAL CYS LEU GLU GLU THR MET ILE HIS GLU SEQRES 6 A 672 THR SER ASP HIS ALA PRO LEU PRO ASP PRO ARG MET TYR SEQRES 7 A 672 SER ASP LYS TYR ILE GLU PRO LEU ALA ARG VAL VAL ALA SEQRES 8 A 672 ALA VAL LYS GLU HIS GLY ALA LEU ALA GLY VAL GLU LEU SEQRES 9 A 672 ALA HIS ALA GLY ALA SER GLY PRO ALA ILE TYR HIS ARG SEQRES 10 A 672 GLU HIS PRO LEU SER PRO THR THR LYS TYR PRO HIS TYR SEQRES 11 A 672 PHE ILE ASN PRO ILE ALA ALA ARG THR ILE ASP ARG GLN SEQRES 12 A 672 ASP ILE ALA ASP PHE ARG ARG TRP TYR ARG ASP ALA ALA SEQRES 13 A 672 LEU ARG ALA LYS ARG ALA GLY PHE ASP ILE VAL TYR VAL SEQRES 14 A 672 TYR CYS ALA HIS ASN LEU SER LEU LEU GLN ASP PHE LEU SEQRES 15 A 672 ASP THR ARG VAL ASN LYS ARG THR ASP ASP TYR GLY GLY SEQRES 16 A 672 ILE PHE GLU ASN ARG VAL ARG LEU LEU ARG GLU THR LEU SEQRES 17 A 672 SER ASP VAL LYS ASP ALA VAL GLY ASP THR CYS ALA VAL SEQRES 18 A 672 ALA VAL ARG PHE ALA VAL GLU ASP ARG ARG ARG GLN THR SEQRES 19 A 672 ASN LEU THR ALA LEU GLU ASP GLY ARG ARG VAL VAL GLU SEQRES 20 A 672 ALA LEU ALA ASP VAL PRO ASP LEU TRP ASP VAL ASN VAL SEQRES 21 A 672 SER ASP TRP ALA TRP ASP SER GLY SER SER ARG PHE PHE SEQRES 22 A 672 GLU GLU GLY GLN GLN GLU PRO PHE ILE ASP PHE VAL LYS SEQRES 23 A 672 LYS VAL THR SER LYS PRO VAL VAL GLY VAL GLY ARG PHE SEQRES 24 A 672 THR SER PRO ASP ALA MET VAL SER GLN ILE ARG ARG GLY SEQRES 25 A 672 VAL LEU ASP LEU ILE GLY ALA ALA ARG PRO SER ILE ALA SEQRES 26 A 672 ASP PRO PHE LEU PRO ASN LYS ILE ASP ALA GLY LEU GLN SEQRES 27 A 672 ASP ASP ILE ARG GLU CYS ILE GLY CYS ASN ALA CYS THR SEQRES 28 A 672 ALA GLU VAL MET THR SER SER ARG ILE ARG CYS THR GLN SEQRES 29 A 672 ASN PRO SER ALA GLY GLU GLU HIS VAL SER GLY TRP HIS SEQRES 30 A 672 PRO GLU LYS VAL PRO PRO ALA HIS ASN SER ASP ALA SER SEQRES 31 A 672 ILE LEU VAL ILE GLY GLY GLY PRO ALA GLY LEU GLU ALA SEQRES 32 A 672 ALA HIS THR LEU ALA LYS ARG GLY TYR GLN VAL SER ILE SEQRES 33 A 672 ALA ASP ALA GLY SER GLU TRP GLY GLY ARG LEU VAL ARG SEQRES 34 A 672 GLU ARG ARG LEU PRO ARG LEU SER ALA TRP GLY ARG VAL SEQRES 35 A 672 VAL ASP TYR ARG VAL GLY GLN LEU GLN THR MET PRO ASN SEQRES 36 A 672 VAL SER MET TYR LEU ASP SER PRO LEU GLY ALA ASP ASP SEQRES 37 A 672 VAL ALA GLY PHE GLU ALA ASP HIS VAL ILE VAL ALA THR SEQRES 38 A 672 GLY ALA LYS TRP ARG GLY GLU GLY VAL GLY ARG ASN HIS SEQRES 39 A 672 ASP GLU PRO ILE PRO GLY CYS ASP LEU PRO HIS VAL LEU SEQRES 40 A 672 THR PRO GLU ASP ILE LEU ASP GLY ARG LEU PRO GLU GLY SEQRES 41 A 672 GLY SER VAL ILE VAL TYR ASP GLU ASP TYR TYR TYR MET SEQRES 42 A 672 ALA ALA VAL VAL ALA ASP ARG LEU ALA ARG ALA GLY CYS SEQRES 43 A 672 LYS VAL THR TYR VAL THR THR ALA SER ASP PRO SER PRO SEQRES 44 A 672 TRP THR HIS ASN THR LEU GLU MET VAL HIS VAL VAL ASN SEQRES 45 A 672 SER MET ASN GLU ALA GLY ILE GLU ILE VAL VAL GLY THR SEQRES 46 A 672 ALA ILE ALA SER ILE GLY PRO SER SER VAL LYS VAL SER SEQRES 47 A 672 ARG LEU LEU ASP GLY ARG GLU ASN GLU MET ALA ALA ASP SEQRES 48 A 672 ALA VAL VAL LEU VAL THR GLY GLN LEU SER GLU ASP GLU SEQRES 49 A 672 LEU TYR HIS GLN LEU ILE ALA LYS ARG ASP GLY GLY LEU SEQRES 50 A 672 LEU ARG SER VAL GLU ARG ILE GLY ASP CYS LEU GLY ALA SEQRES 51 A 672 GLY GLN ILE ALA GLN ALA THR TYR ASP GLY ARG LYS ALA SEQRES 52 A 672 GLY MET ARG TYR GLY THR SER VAL GLU HET FMN A 701 31 HET SF4 A 702 8 HET ADP A 703 27 HET SO4 A 704 5 HET SO4 A 705 5 HET SO4 A 706 5 HET FLC A 707 13 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION HETNAM FLC CITRATE ANION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 SF4 FE4 S4 FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 FLC C6 H5 O7 3- FORMUL 9 HOH *109(H2 O) HELIX 1 AA1 ASP A 3 GLU A 11 5 9 HELIX 2 AA2 GLY A 34 THR A 36 5 3 HELIX 3 AA3 ALA A 37 GLY A 52 1 16 HELIX 4 AA4 SER A 79 LYS A 81 5 3 HELIX 5 AA5 TYR A 82 GLU A 95 1 14 HELIX 6 AA6 ALA A 107 GLY A 111 5 5 HELIX 7 AA7 ASP A 141 GLY A 163 1 23 HELIX 8 AA8 SER A 176 ASP A 183 1 8 HELIX 9 AA9 ILE A 196 GLY A 216 1 21 HELIX 10 AB1 GLU A 240 ALA A 250 1 11 HELIX 11 AB2 ASP A 262 SER A 267 1 6 HELIX 12 AB3 GLN A 278 ASP A 283 1 6 HELIX 13 AB4 PHE A 284 THR A 289 1 6 HELIX 14 AB5 SER A 301 ARG A 311 1 11 HELIX 15 AB6 ALA A 320 ASP A 326 1 7 HELIX 16 AB7 PHE A 328 ALA A 335 1 8 HELIX 17 AB8 GLY A 336 ILE A 341 5 6 HELIX 18 AB9 ASN A 348 THR A 356 1 9 HELIX 19 AC1 GLY A 397 GLY A 411 1 15 HELIX 20 AC2 ARG A 426 ARG A 431 1 6 HELIX 21 AC3 LEU A 436 TRP A 439 5 4 HELIX 22 AC4 GLY A 440 GLN A 451 1 12 HELIX 23 AC5 GLY A 465 GLU A 473 1 9 HELIX 24 AC6 THR A 508 ASP A 514 1 7 HELIX 25 AC7 TYR A 532 ARG A 543 1 12 HELIX 26 AC8 SER A 558 ASN A 563 5 6 HELIX 27 AC9 GLU A 566 GLY A 578 1 13 HELIX 28 AD1 ASP A 623 ARG A 633 1 11 HELIX 29 AD2 GLY A 645 LEU A 648 5 4 HELIX 30 AD3 GLN A 652 TYR A 667 1 16 SHEET 1 AA1 2 VAL A 13 ILE A 15 0 SHEET 2 AA1 2 VAL A 18 THR A 20 -1 O VAL A 18 N ILE A 15 SHEET 1 AA2 9 PHE A 24 VAL A 26 0 SHEET 2 AA2 9 VAL A 55 MET A 62 1 O VAL A 55 N VAL A 26 SHEET 3 AA2 9 LEU A 99 ALA A 105 1 O GLU A 103 N THR A 61 SHEET 4 AA2 9 ILE A 166 CYS A 171 1 O TYR A 168 N VAL A 102 SHEET 5 AA2 9 ALA A 220 ASP A 229 1 O ALA A 220 N VAL A 167 SHEET 6 AA2 9 LEU A 255 SER A 261 1 O SER A 261 N GLU A 228 SHEET 7 AA2 9 VAL A 293 VAL A 296 1 O VAL A 294 N TRP A 256 SHEET 8 AA2 9 LEU A 316 ALA A 319 1 O GLY A 318 N GLY A 295 SHEET 9 AA2 9 PHE A 24 VAL A 26 1 N TYR A 25 O ILE A 317 SHEET 1 AA3 2 LEU A 121 SER A 122 0 SHEET 2 AA3 2 ARG A 138 THR A 139 1 O ARG A 138 N SER A 122 SHEET 1 AA4 5 VAL A 456 TYR A 459 0 SHEET 2 AA4 5 GLN A 413 ALA A 417 1 N ILE A 416 O TYR A 459 SHEET 3 AA4 5 SER A 390 ILE A 394 1 N ILE A 391 O SER A 415 SHEET 4 AA4 5 HIS A 476 VAL A 479 1 O ILE A 478 N ILE A 394 SHEET 5 AA4 5 VAL A 641 ARG A 643 1 O GLU A 642 N VAL A 479 SHEET 1 AA5 2 ALA A 483 TRP A 485 0 SHEET 2 AA5 2 GLN A 619 SER A 621 -1 O LEU A 620 N LYS A 484 SHEET 1 AA6 5 VAL A 506 LEU A 507 0 SHEET 2 AA6 5 ALA A 612 VAL A 616 1 O VAL A 613 N LEU A 507 SHEET 3 AA6 5 SER A 522 ASP A 527 1 N ILE A 524 O VAL A 614 SHEET 4 AA6 5 LYS A 547 THR A 552 1 O VAL A 551 N VAL A 525 SHEET 5 AA6 5 GLU A 580 VAL A 582 1 O GLU A 580 N TYR A 550 SHEET 1 AA7 3 THR A 585 ILE A 590 0 SHEET 2 AA7 3 SER A 594 ARG A 599 -1 O SER A 598 N ALA A 586 SHEET 3 AA7 3 GLU A 605 ALA A 609 -1 O MET A 608 N VAL A 595 LINK SG CYS A 344 FE2 SF4 A 702 1555 1555 2.21 LINK SG CYS A 347 FE1 SF4 A 702 1555 1555 2.19 LINK SG CYS A 350 FE4 SF4 A 702 1555 1555 2.09 LINK SG CYS A 362 FE3 SF4 A 702 1555 1555 2.00 CISPEP 1 ALA A 70 PRO A 71 0 10.42 SITE 1 AC1 21 VAL A 27 PRO A 28 HIS A 29 ALA A 30 SITE 2 AC1 21 GLU A 59 GLU A 60 GLU A 103 TYR A 170 SITE 3 AC1 21 HIS A 173 ARG A 224 TRP A 263 ASP A 266 SITE 4 AC1 21 SER A 267 VAL A 296 ARG A 298 ALA A 319 SITE 5 AC1 21 ALA A 320 ARG A 321 PRO A 322 THR A 351 SITE 6 AC1 21 HOH A 855 SITE 1 AC2 7 ILE A 324 CYS A 344 CYS A 347 ASN A 348 SITE 2 AC2 7 CYS A 350 CYS A 362 THR A 363 SITE 1 AC3 18 GLY A 395 GLY A 397 PRO A 398 ALA A 399 SITE 2 AC3 18 ASP A 418 ALA A 419 GLY A 425 ARG A 426 SITE 3 AC3 18 SER A 462 LEU A 464 ALA A 480 THR A 481 SITE 4 AC3 18 GLY A 482 ASP A 646 ALA A 656 HOH A 807 SITE 5 AC3 18 HOH A 838 HOH A 845 SITE 1 AC4 1 ARG A 432 SITE 1 AC5 3 HIS A 64 ARG A 150 TRP A 151 SITE 1 AC6 4 ARG A 76 LYS A 81 TYR A 82 HIS A 116 SITE 1 AC7 4 ARG A 435 SER A 437 ARG A 543 HOH A 878 CRYST1 115.110 212.902 79.470 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008687 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004697 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012583 0.00000