HEADER TRANSFERASE 01-NOV-19 6L7H TITLE CRYSTAL STRUCTURE OF GGCGT IN COMPLEX WITH UDP AND NOTHOFAGIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GGCGT1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLYCYRRHIZA GLABRA; SOURCE 3 ORGANISM_TAXID: 49827; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DI-C-GLYCOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZHANG,F.D.LI,M.YE REVDAT 3 22-NOV-23 6L7H 1 REMARK REVDAT 2 04-MAR-20 6L7H 1 JRNL REVDAT 1 19-FEB-20 6L7H 0 JRNL AUTH M.ZHANG,F.D.LI,K.LI,Z.L.WANG,Y.X.WANG,J.B.HE,H.F.SU, JRNL AUTH 2 Z.Y.ZHANG,C.B.CHI,X.M.SHI,C.H.YUN,Z.Y.ZHANG,Z.M.LIU, JRNL AUTH 3 L.R.ZHANG,D.H.YANG,M.MA,X.QIAO,M.YE JRNL TITL FUNCTIONAL CHARACTERIZATION AND STRUCTURAL BASIS OF AN JRNL TITL 2 EFFICIENT DI-C-GLYCOSYLTRANSFERASE FROMGLYCYRRHIZA GLABRA. JRNL REF J.AM.CHEM.SOC. V. 142 3506 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 31986016 JRNL DOI 10.1021/JACS.9B12211 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 9.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 9.0020 - 4.1976 1.00 2863 132 0.1468 0.1966 REMARK 3 2 4.1976 - 3.3900 1.00 2754 152 0.1364 0.1786 REMARK 3 3 3.3900 - 2.9792 1.00 2744 138 0.1620 0.1865 REMARK 3 4 2.9792 - 2.7150 1.00 2717 148 0.1710 0.2482 REMARK 3 5 2.7150 - 2.5250 1.00 2712 152 0.1705 0.2165 REMARK 3 6 2.5250 - 2.3790 1.00 2675 152 0.1685 0.2068 REMARK 3 7 2.3790 - 2.2619 1.00 2681 148 0.1740 0.2346 REMARK 3 8 2.2619 - 2.1648 1.00 2668 151 0.1706 0.2349 REMARK 3 9 2.1648 - 2.0826 1.00 2664 143 0.1772 0.2326 REMARK 3 10 2.0826 - 2.0115 1.00 2697 148 0.1896 0.2521 REMARK 3 11 2.0115 - 1.9493 0.99 2657 121 0.2125 0.2748 REMARK 3 12 1.9493 - 1.8941 1.00 2678 139 0.2267 0.2894 REMARK 3 13 1.8941 - 1.8447 1.00 2698 121 0.2095 0.2519 REMARK 3 14 1.8447 - 1.8000 0.99 2614 128 0.2176 0.2799 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L7H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54056 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39867 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 59.838 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.62100 REMARK 200 R SYM FOR SHELL (I) : 0.62100 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6L5P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M BIS REMARK 280 -TRIS, PH 6.5, 25% W/V POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.09650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.01100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.65300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.01100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.09650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.65300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 ASN A 4 REMARK 465 ASN A 5 REMARK 465 MET A 6 REMARK 465 SER A 82 REMARK 465 ASP A 83 REMARK 465 SER A 84 REMARK 465 THR A 85 REMARK 465 ILE A 86 REMARK 465 SER A 87 REMARK 465 VAL A 259 REMARK 465 LYS A 260 REMARK 465 ARG A 261 REMARK 465 GLY A 262 REMARK 465 LYS A 470 REMARK 465 ASN A 471 REMARK 465 VAL A 472 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 LYS A 338 CG CD CE NZ REMARK 470 GLN A 462 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 146 -167.74 -110.31 REMARK 500 SER A 146 -168.16 -109.82 REMARK 500 GLU A 225 47.22 -141.41 REMARK 500 ARG A 285 22.35 -146.29 REMARK 500 GLU A 321 -6.51 -142.24 REMARK 500 LYS A 346 71.29 -119.21 REMARK 500 ASP A 411 175.14 77.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1156 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A1157 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A1158 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A1159 DISTANCE = 6.26 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 UDP A 503 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E7F A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP A 503 DBREF 6L7H A -1 472 PDB 6L7H 6L7H -1 472 SEQRES 1 A 474 GLY SER MET GLY GLU ASN ASN MET SER SER ILE ALA PRO SEQRES 2 A 474 HIS PRO VAL VAL HIS VAL ALA LEU LEU PRO SER ALA GLY SEQRES 3 A 474 MET GLY HIS LEU THR PRO PHE LEU ARG LEU ALA SER LEU SEQRES 4 A 474 LEU LEU HIS GLN HIS CYS HIS VAL THR LEU ILE THR PRO SEQRES 5 A 474 GLN PRO THR VAL SER LYS ALA GLU GLU ASP LEU LEU SER SEQRES 6 A 474 ARG PHE LEU SER ALA PHE PRO GLN VAL ASN GLN LEU HIS SEQRES 7 A 474 PHE HIS LEU PRO PRO SER ASP SER THR ILE SER THR ASP SEQRES 8 A 474 PRO PHE PHE LEU GLN PHE ALA SER ILE ARG SER SER SER SEQRES 9 A 474 HIS LEU LEU THR PRO LEU LEU SER SER LEU THR PRO PRO SEQRES 10 A 474 LEU SER SER PHE ILE TYR ASP MET THR LEU ILE SER PRO SEQRES 11 A 474 LEU LEU PRO ILE ALA GLU SER LEU GLY VAL PRO HIS TYR SEQRES 12 A 474 ILE LEU PHE THR SER SER ALA THR MET PHE SER PHE PHE SEQRES 13 A 474 SER TYR PHE PRO THR LEU ALA LYS SER GLU SER PHE PRO SEQRES 14 A 474 GLY LYS LEU ASP PHE VAL GLU ILE PRO GLY VAL SER VAL SEQRES 15 A 474 SER SER ILE PRO ARG SER SER ILE PRO PRO PRO LEU LEU SEQRES 16 A 474 VAL PRO ASN SER LEU PHE GLY LYS LEU PHE MET GLU ASP SEQRES 17 A 474 SER PRO LYS LEU LYS LYS LEU HIS GLY VAL LEU VAL ASN SEQRES 18 A 474 THR PHE GLU GLY ILE GLU LYS LEU SER LEU GLU ALA LEU SEQRES 19 A 474 ASN GLY GLY LYS VAL VAL LYS GLY LEU PRO PRO VAL TYR SEQRES 20 A 474 GLY VAL GLY PRO PHE VAL PRO CYS GLU PHE GLU LYS VAL SEQRES 21 A 474 VAL LYS ARG GLY GLU THR ILE SER GLU TRP LEU ASP GLU SEQRES 22 A 474 GLN PRO SER GLY SER VAL VAL TYR VAL SER PHE GLY SER SEQRES 23 A 474 ARG THR ALA MET GLY ARG GLU GLN LEU ARG GLU VAL GLY SEQRES 24 A 474 ASP GLY LEU VAL LYS SER GLY TRP ARG PHE LEU TRP VAL SEQRES 25 A 474 VAL LYS ASP LYS ILE VAL ASP ARG ALA GLU GLU GLU GLY SEQRES 26 A 474 LEU ASP GLY VAL LEU GLY PHE GLU LEU VAL GLU ARG MET SEQRES 27 A 474 VAL LYS GLU LYS LYS GLY LEU VAL VAL LYS GLU TRP VAL SEQRES 28 A 474 ASP GLN SER GLU ILE LEU GLY HIS LYS ALA VAL GLY GLY SEQRES 29 A 474 PHE VAL SER HIS CYS GLY TRP ASN SER VAL VAL GLU ALA SEQRES 30 A 474 ALA TRP PHE GLY VAL LYS ILE LEU GLY TRP PRO LEU HIS SEQRES 31 A 474 GLY ASP GLN LYS ILE ASN ALA GLU VAL VAL ALA LYS GLY SEQRES 32 A 474 GLY TRP GLY VAL TRP LYS GLU GLY TRP ASP TRP GLU GLY SEQRES 33 A 474 GLU ARG LEU VAL LYS GLY GLU GLU ILE GLY GLU ALA ILE SEQRES 34 A 474 ARG GLU VAL MET ASN ASP GLU SER LEU VAL MET LYS ALA SEQRES 35 A 474 THR GLN VAL LYS LYS ASP ALA ARG LYS ALA ILE SER VAL SEQRES 36 A 474 GLY GLY GLY CYS GLU VAL ALA LEU GLN LYS LEU MET GLU SEQRES 37 A 474 VAL TRP LYS LYS ASN VAL HET UDP A 501 25 HET E7F A 502 31 HET UDP A 503 21 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM E7F 1-[3-[(2S,3R,4R,5S,6R)-6-(HYDROXYMETHYL)-3,4,5- HETNAM 2 E7F TRIS(OXIDANYL)OXAN-2-YL]-2,4,6-TRIS(OXIDANYL)PHENYL]- HETNAM 3 E7F 3-(4-HYDROXYPHENYL)PROPAN-1-ONE FORMUL 2 UDP 2(C9 H14 N2 O12 P2) FORMUL 3 E7F C21 H24 O10 FORMUL 5 HOH *559(H2 O) HELIX 1 AA1 GLY A 24 GLN A 41 1 18 HELIX 2 AA2 SER A 55 PHE A 69 1 15 HELIX 3 AA3 ASP A 89 SER A 102 1 14 HELIX 4 AA4 LEU A 105 SER A 111 1 7 HELIX 5 AA5 LEU A 125 GLY A 137 1 13 HELIX 6 AA6 SER A 147 LYS A 162 1 16 HELIX 7 AA7 SER A 186 ILE A 188 5 3 HELIX 8 AA8 PRO A 189 VAL A 194 5 6 HELIX 9 AA9 SER A 197 SER A 207 1 11 HELIX 10 AB1 PRO A 208 LEU A 213 5 6 HELIX 11 AB2 PHE A 221 GLY A 234 1 14 HELIX 12 AB3 CYS A 253 LYS A 257 5 5 HELIX 13 AB4 THR A 264 GLU A 271 1 8 HELIX 14 AB5 GLY A 289 GLY A 304 1 16 HELIX 15 AB6 VAL A 316 GLU A 320 5 5 HELIX 16 AB7 GLY A 323 GLY A 329 1 7 HELIX 17 AB8 GLY A 329 LYS A 340 1 12 HELIX 18 AB9 ASP A 350 GLY A 356 1 7 HELIX 19 AC1 GLY A 368 GLY A 379 1 12 HELIX 20 AC2 ASP A 390 GLY A 401 1 12 HELIX 21 AC3 LYS A 419 ASN A 432 1 14 HELIX 22 AC4 ASP A 433 SER A 452 1 20 HELIX 23 AC5 GLY A 455 LYS A 469 1 15 SHEET 1 AA1 7 ASN A 73 HIS A 78 0 SHEET 2 AA1 7 HIS A 44 GLN A 51 1 N GLN A 51 O PHE A 77 SHEET 3 AA1 7 HIS A 16 LEU A 20 1 N LEU A 19 O ILE A 48 SHEET 4 AA1 7 SER A 118 ASP A 122 1 O ILE A 120 N ALA A 18 SHEET 5 AA1 7 HIS A 140 PHE A 144 1 O TYR A 141 N TYR A 121 SHEET 6 AA1 7 GLY A 215 VAL A 218 1 O LEU A 217 N PHE A 144 SHEET 7 AA1 7 VAL A 244 GLY A 246 1 O TYR A 245 N VAL A 216 SHEET 1 AA2 2 PHE A 172 VAL A 173 0 SHEET 2 AA2 2 ILE A 183 PRO A 184 -1 O ILE A 183 N VAL A 173 SHEET 1 AA3 6 GLY A 342 VAL A 345 0 SHEET 2 AA3 6 ARG A 306 VAL A 310 1 N TRP A 309 O LEU A 343 SHEET 3 AA3 6 VAL A 277 SER A 281 1 N VAL A 280 O VAL A 310 SHEET 4 AA3 6 VAL A 360 SER A 365 1 O VAL A 364 N TYR A 279 SHEET 5 AA3 6 ILE A 382 GLY A 384 1 O LEU A 383 N PHE A 363 SHEET 6 AA3 6 GLY A 404 TRP A 406 1 O VAL A 405 N GLY A 384 CISPEP 1 GLN A 51 PRO A 52 0 -3.41 CISPEP 2 THR A 113 PRO A 114 0 -4.47 CISPEP 3 PHE A 166 PRO A 167 0 -1.20 CISPEP 4 GLY A 248 PRO A 249 0 -2.51 SITE 1 AC1 20 GLY A 26 SER A 284 ARG A 285 TRP A 348 SITE 2 AC1 20 VAL A 349 GLN A 351 HIS A 366 GLY A 368 SITE 3 AC1 20 TRP A 369 ASN A 370 SER A 371 GLU A 374 SITE 4 AC1 20 E7F A 502 HOH A 641 HOH A 714 HOH A 723 SITE 5 AC1 20 HOH A 731 HOH A 790 HOH A 808 HOH A 878 SITE 1 AC2 21 PHE A 95 MET A 123 THR A 124 PHE A 144 SITE 2 AC2 21 SER A 146 MET A 150 PRO A 189 PHE A 199 SITE 3 AC2 21 LEU A 202 PHE A 203 ARG A 285 GLY A 389 SITE 4 AC2 21 ASP A 390 GLN A 391 UDP A 501 UDP A 503 SITE 5 AC2 21 HOH A 632 HOH A 663 HOH A 668 HOH A 714 SITE 6 AC2 21 HOH A 864 SITE 1 AC3 14 ASP A 89 PRO A 190 ARG A 285 THR A 286 SITE 2 AC3 14 HIS A 388 GLY A 389 GLN A 391 E7F A 502 SITE 3 AC3 14 HOH A 632 HOH A 656 HOH A 665 HOH A 770 SITE 4 AC3 14 HOH A 772 HOH A 937 CRYST1 54.193 71.306 110.022 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014024 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009089 0.00000