HEADER FLUORESCENT PROTEIN 05-JAN-20 6LOF TITLE CRYSTAL STRUCTURE OF ZSYELLOW SOAKED BY CU2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: GFP-LIKE FLUORESCENT CHROMOPROTEIN FP538; COMPND 3 CHAIN: C, D; COMPND 4 SYNONYM: ZFP538; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GFP-LIKE FLUORESCENT CHROMOPROTEIN FP538; COMPND 8 CHAIN: A, B; COMPND 9 SYNONYM: ZFP538; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZOANTHUS SP.; SOURCE 3 ORGANISM_COMMON: GREEN POLYP; SOURCE 4 ORGANISM_TAXID: 105402; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ZOANTHUS SP.; SOURCE 9 ORGANISM_COMMON: GREEN POLYP; SOURCE 10 ORGANISM_TAXID: 105402; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ZSYELLOW, FLUORESCENT PROTEIN, YELLOW EXPDTA X-RAY DIFFRACTION AUTHOR K.H.NAM REVDAT 4 29-NOV-23 6LOF 1 JRNL REVDAT 3 14-OCT-20 6LOF 1 JRNL REVDAT 2 29-JUL-20 6LOF 1 JRNL REVDAT 1 22-JAN-20 6LOF 0 JRNL AUTH I.J.KIM,Y.XU,K.H.NAM JRNL TITL SPECTROSCOPIC AND STRUCTURAL ANALYSIS OF CU 2+ -INDUCED JRNL TITL 2 FLUORESCENCE QUENCHING OF ZSYELLOW. JRNL REF BIOSENSORS (BASEL) V. 10 2020 JRNL REFN ESSN 2079-6374 JRNL PMID 32210006 JRNL DOI 10.3390/BIOS10030029 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 12678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 672 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 876 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3604 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.77000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : 0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.372 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.298 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.760 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3704 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3386 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4986 ; 1.645 ; 1.670 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7902 ; 1.184 ; 1.604 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 441 ; 7.523 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;37.383 ;23.488 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 643 ;21.254 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;22.244 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 459 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4073 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 781 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6LOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1300015163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13421 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.37600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5Y8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IMIDAZOLE,PEG 8000, CALCIUM ACETATE., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 24.31900 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.09450 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 24.31900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.09450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 27520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -145.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, D, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ORIGINALLY IT IS A FLUORESCENT PROTEIN COMPOSED OF ONE POLYPEPTIDE REMARK 400 (CHAIN C AND A, CHAIN D AND B IN ONE CHAIN). AMINO ACIDS ARE BROKEN REMARK 400 DURING CHROMOPHORE GENERATION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 HIS C 3 REMARK 465 SER C 4 REMARK 465 ALA A 231 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 HIS D 3 REMARK 465 ALA B 231 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 196 O HOH B 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 72 59.61 -91.80 REMARK 500 ASP A 211 -169.47 -113.91 REMARK 500 ASP B 134 43.20 -103.41 REMARK 500 VAL B 190 107.14 -25.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY D 64 13.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE 65 IS PHE. IT IS TRANSFORMED INTO NFA DURING CHROMOPHORE REMARK 999 GENERATION. DBREF 6LOF C 1 65 UNP Q9U6Y4 GFPL2_ZOASP 1 65 DBREF 6LOF A 66 231 UNP Q9U6Y4 GFPL2_ZOASP 66 231 DBREF 6LOF D 1 65 UNP Q9U6Y4 GFPL2_ZOASP 1 65 DBREF 6LOF B 66 231 UNP Q9U6Y4 GFPL2_ZOASP 66 231 SEQADV 6LOF GLY C -2 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF SER C -1 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF HIS C 0 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF CH7 A 66 UNP Q9U6Y4 LYS 66 CHROMOPHORE SEQADV 6LOF CH7 A 66 UNP Q9U6Y4 TYR 67 CHROMOPHORE SEQADV 6LOF VAL A 129 UNP Q9U6Y4 MET 129 ENGINEERED MUTATION SEQADV 6LOF GLY D -2 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF SER D -1 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF HIS D 0 UNP Q9U6Y4 EXPRESSION TAG SEQADV 6LOF CH7 B 66 UNP Q9U6Y4 LYS 66 CHROMOPHORE SEQADV 6LOF CH7 B 66 UNP Q9U6Y4 TYR 67 CHROMOPHORE SEQADV 6LOF VAL B 129 UNP Q9U6Y4 MET 129 ENGINEERED MUTATION SEQRES 1 C 68 GLY SER HIS MET ALA HIS SER LYS HIS GLY LEU LYS GLU SEQRES 2 C 68 GLU MET THR MET LYS TYR HIS MET GLU GLY CYS VAL ASN SEQRES 3 C 68 GLY HIS LYS PHE VAL ILE THR GLY GLU GLY ILE GLY TYR SEQRES 4 C 68 PRO PHE LYS GLY LYS GLN THR ILE ASN LEU CYS VAL ILE SEQRES 5 C 68 GLU GLY GLY PRO LEU PRO PHE SER GLU ASP ILE LEU SER SEQRES 6 C 68 ALA GLY NFA SEQRES 1 A 164 CH7 ASP ARG ILE PHE THR GLU TYR PRO GLN ASP ILE VAL SEQRES 2 A 164 ASP TYR PHE LYS ASN SER CYS PRO ALA GLY TYR THR TRP SEQRES 3 A 164 GLY ARG SER PHE LEU PHE GLU ASP GLY ALA VAL CYS ILE SEQRES 4 A 164 CYS ASN VAL ASP ILE THR VAL SER VAL LYS GLU ASN CYS SEQRES 5 A 164 ILE TYR HIS LYS SER ILE PHE ASN GLY VAL ASN PHE PRO SEQRES 6 A 164 ALA ASP GLY PRO VAL MET LYS LYS MET THR THR ASN TRP SEQRES 7 A 164 GLU ALA SER CYS GLU LYS ILE MET PRO VAL PRO LYS GLN SEQRES 8 A 164 GLY ILE LEU LYS GLY ASP VAL SER MET TYR LEU LEU LEU SEQRES 9 A 164 LYS ASP GLY GLY ARG TYR ARG CYS GLN PHE ASP THR VAL SEQRES 10 A 164 TYR LYS ALA LYS SER VAL PRO SER LYS MET PRO GLU TRP SEQRES 11 A 164 HIS PHE ILE GLN HIS LYS LEU LEU ARG GLU ASP ARG SER SEQRES 12 A 164 ASP ALA LYS ASN GLN LYS TRP GLN LEU THR GLU HIS ALA SEQRES 13 A 164 ILE ALA PHE PRO SER ALA LEU ALA SEQRES 1 D 68 GLY SER HIS MET ALA HIS SER LYS HIS GLY LEU LYS GLU SEQRES 2 D 68 GLU MET THR MET LYS TYR HIS MET GLU GLY CYS VAL ASN SEQRES 3 D 68 GLY HIS LYS PHE VAL ILE THR GLY GLU GLY ILE GLY TYR SEQRES 4 D 68 PRO PHE LYS GLY LYS GLN THR ILE ASN LEU CYS VAL ILE SEQRES 5 D 68 GLU GLY GLY PRO LEU PRO PHE SER GLU ASP ILE LEU SER SEQRES 6 D 68 ALA GLY NFA SEQRES 1 B 164 CH7 ASP ARG ILE PHE THR GLU TYR PRO GLN ASP ILE VAL SEQRES 2 B 164 ASP TYR PHE LYS ASN SER CYS PRO ALA GLY TYR THR TRP SEQRES 3 B 164 GLY ARG SER PHE LEU PHE GLU ASP GLY ALA VAL CYS ILE SEQRES 4 B 164 CYS ASN VAL ASP ILE THR VAL SER VAL LYS GLU ASN CYS SEQRES 5 B 164 ILE TYR HIS LYS SER ILE PHE ASN GLY VAL ASN PHE PRO SEQRES 6 B 164 ALA ASP GLY PRO VAL MET LYS LYS MET THR THR ASN TRP SEQRES 7 B 164 GLU ALA SER CYS GLU LYS ILE MET PRO VAL PRO LYS GLN SEQRES 8 B 164 GLY ILE LEU LYS GLY ASP VAL SER MET TYR LEU LEU LEU SEQRES 9 B 164 LYS ASP GLY GLY ARG TYR ARG CYS GLN PHE ASP THR VAL SEQRES 10 B 164 TYR LYS ALA LYS SER VAL PRO SER LYS MET PRO GLU TRP SEQRES 11 B 164 HIS PHE ILE GLN HIS LYS LEU LEU ARG GLU ASP ARG SER SEQRES 12 B 164 ASP ALA LYS ASN GLN LYS TRP GLN LEU THR GLU HIS ALA SEQRES 13 B 164 ILE ALA PHE PRO SER ALA LEU ALA MODRES 6LOF NFA C 65 PHE MODIFIED RESIDUE MODRES 6LOF CH7 A 66 LYS CHROMOPHORE MODRES 6LOF CH7 A 66 TYR CHROMOPHORE MODRES 6LOF NFA D 65 PHE MODIFIED RESIDUE MODRES 6LOF CH7 B 66 LYS CHROMOPHORE MODRES 6LOF CH7 B 66 TYR CHROMOPHORE HET NFA C 65 12 HET CH7 A 66 23 HET NFA D 65 12 HET CH7 B 66 23 HETNAM NFA PHENYLALANINE AMIDE HETNAM CH7 [(4Z)-4-(4-HYDROXYBENZYLIDENE)-5-OXO-2-(3,4,5,6- HETNAM 2 CH7 TETRAHYDROPYRIDIN-2-YL)-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CH7 YL]ACETIC ACID HETSYN CH7 CHROMOPHORE (LYS-TYR-GLY) FORMUL 1 NFA 2(C9 H12 N2 O) FORMUL 2 CH7 2(C17 H17 N3 O4) FORMUL 5 HOH *54(H2 O) HELIX 1 AA1 SER C 57 NFA C 65 5 9 HELIX 2 AA2 ASP A 81 CYS A 87 1 7 HELIX 3 AA3 SER D 57 NFA D 65 5 9 HELIX 4 AA4 ASP B 81 SER B 86 1 6 SHEET 1 AA113 THR A 142 TRP A 145 0 SHEET 2 AA113 ILE A 160 LEU A 171 -1 O LEU A 170 N ASN A 144 SHEET 3 AA113 ARG A 176 ALA A 187 -1 O CYS A 179 N MET A 167 SHEET 4 AA113 TYR A 91 PHE A 99 -1 N THR A 92 O LYS A 186 SHEET 5 AA113 VAL A 104 SER A 114 -1 O CYS A 105 N PHE A 97 SHEET 6 AA113 CYS A 119 VAL A 129 -1 O ASN A 127 N ILE A 106 SHEET 7 AA113 MET C 12 VAL C 22 1 N LYS C 15 O ILE A 120 SHEET 8 AA113 HIS C 25 TYR C 36 -1 O ILE C 29 N MET C 18 SHEET 9 AA113 LYS C 41 GLU C 50 -1 O CYS C 47 N THR C 30 SHEET 10 AA113 LYS A 216 PHE A 226 -1 O LEU A 219 N ILE C 44 SHEET 11 AA113 HIS A 198 ASP A 208 -1 N PHE A 199 O PHE A 226 SHEET 12 AA113 SER A 148 VAL A 155 -1 N GLU A 150 O ILE A 200 SHEET 13 AA113 ILE A 160 LEU A 171 -1 O ASP A 164 N LYS A 151 SHEET 1 AA213 THR B 142 TRP B 145 0 SHEET 2 AA213 ILE B 160 LEU B 171 -1 O LEU B 170 N ASN B 144 SHEET 3 AA213 ARG B 176 ALA B 187 -1 O THR B 183 N GLY B 163 SHEET 4 AA213 TYR B 91 PHE B 99 -1 N THR B 92 O LYS B 186 SHEET 5 AA213 VAL B 104 SER B 114 -1 O CYS B 105 N PHE B 97 SHEET 6 AA213 CYS B 119 VAL B 129 -1 O ILE B 125 N ASN B 108 SHEET 7 AA213 MET D 12 VAL D 22 1 N HIS D 17 O SER B 124 SHEET 8 AA213 HIS D 25 GLY D 35 -1 O ILE D 29 N MET D 18 SHEET 9 AA213 LYS D 41 GLU D 50 -1 O ASN D 45 N GLU D 32 SHEET 10 AA213 LYS B 216 PHE B 226 -1 O TRP B 217 N LEU D 46 SHEET 11 AA213 HIS B 198 ASP B 208 -1 N PHE B 199 O PHE B 226 SHEET 12 AA213 SER B 148 VAL B 155 -1 N ILE B 152 O HIS B 198 SHEET 13 AA213 ILE B 160 LEU B 171 -1 O ILE B 160 N VAL B 155 LINK C GLY C 64 N NFA C 65 1555 1555 1.29 LINK C3 CH7 A 66 N ASP A 69 1555 1555 1.32 LINK C GLY D 64 N NFA D 65 1555 1555 1.30 LINK C3 CH7 B 66 N ASP B 69 1555 1555 1.32 CISPEP 1 GLY C 52 PRO C 53 0 -9.91 CISPEP 2 CYS A 87 PRO A 88 0 -2.21 CISPEP 3 GLY D 52 PRO D 53 0 3.91 CISPEP 4 CYS B 87 PRO B 88 0 5.45 CRYST1 48.638 72.929 124.189 90.00 90.00 90.00 P 21 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020560 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013712 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008052 0.00000