HEADER VIRUS 13-JAN-20 6LQD TITLE STRUCTURE OF ENTEROVIRUS 71 IN COMPLEX WITH NLD-22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CAPSID PROTEIN VP2; COMPND 7 CHAIN: B; COMPND 8 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CAPSID PROTEIN VP3; COMPND 11 CHAIN: C; COMPND 12 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: CAPSID PROTEIN VP4; COMPND 15 CHAIN: D; COMPND 16 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 3 ORGANISM_COMMON: EV71; SOURCE 4 ORGANISM_TAXID: 39054; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 7 ORGANISM_COMMON: EV71; SOURCE 8 ORGANISM_TAXID: 39054; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 11 ORGANISM_COMMON: EV71; SOURCE 12 ORGANISM_TAXID: 39054; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 15 ORGANISM_COMMON: EV71; SOURCE 16 ORGANISM_TAXID: 39054 KEYWDS INHIBITOR, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR M.ZHANG,Y.SUN,X.WANG,Y.GUO,Z.RAO REVDAT 2 27-MAR-24 6LQD 1 REMARK REVDAT 1 11-MAR-20 6LQD 0 JRNL AUTH M.ZHANG,Y.WANG,W.HE,Y.SUN,Y.GUO,W.ZHONG,Q.GAO,M.LIAO,X.WANG, JRNL AUTH 2 Y.CAI,Y.GUO,Z.RAO JRNL TITL DESIGN, SYNTHESIS, AND EVALUATION OF NOVEL ENTEROVIRUS 71 JRNL TITL 2 INHIBITORS AS THERAPEUTIC DRUG LEADS FOR THE TREATMENT OF JRNL TITL 3 HUMAN HAND, FOOT, AND MOUTH DISEASE. JRNL REF J.MED.CHEM. V. 63 1233 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 31939669 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01414 REMARK 2 REMARK 2 RESOLUTION. 3.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.264 REMARK 3 NUMBER OF PARTICLES : 13185 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6LQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1300015264. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN ENTEROVIRUS 71 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.361789 -0.262873 -0.894431 439.52423 REMARK 350 BIOMT2 2 0.587755 0.809039 -0.000035 -97.12236 REMARK 350 BIOMT3 2 0.723639 -0.525694 0.447206 86.86442 REMARK 350 BIOMT1 3 -0.670858 0.162418 -0.723581 546.37584 REMARK 350 BIOMT2 3 0.688135 0.500057 -0.525750 82.63146 REMARK 350 BIOMT3 3 0.276441 -0.850625 -0.447233 494.82400 REMARK 350 BIOMT1 4 -0.670858 0.688135 0.276441 172.88954 REMARK 350 BIOMT2 4 0.162418 0.500057 -0.850625 290.84780 REMARK 350 BIOMT3 4 -0.723581 -0.525750 -0.447233 660.09248 REMARK 350 BIOMT1 5 0.361789 0.587755 0.723639 -164.78930 REMARK 350 BIOMT2 5 -0.262873 0.809039 -0.525694 239.77875 REMARK 350 BIOMT3 5 -0.894431 -0.000035 0.447206 354.27443 REMARK 350 BIOMT1 6 -0.861761 -0.425396 0.276417 492.20418 REMARK 350 BIOMT2 6 -0.425396 0.309050 -0.850603 481.48874 REMARK 350 BIOMT3 6 0.276417 -0.850603 -0.447289 494.83828 REMARK 350 BIOMT1 7 -0.361779 -0.262940 0.894415 178.76576 REMARK 350 BIOMT2 7 -0.587787 0.809016 0.000082 190.61385 REMARK 350 BIOMT3 7 -0.723618 -0.525696 -0.447237 660.08925 REMARK 350 BIOMT1 8 0.361802 -0.587815 0.723583 122.98552 REMARK 350 BIOMT2 8 0.262908 0.808995 0.525744 -146.29922 REMARK 350 BIOMT3 8 -0.894415 0.000020 0.447237 354.24963 REMARK 350 BIOMT1 9 0.309017 -0.951057 0.000004 401.94985 REMARK 350 BIOMT2 9 0.951057 0.309017 -0.000065 -63.64806 REMARK 350 BIOMT3 9 0.000060 0.000024 1.000000 -0.02064 REMARK 350 BIOMT1 10 -0.447186 -0.850676 -0.276360 630.13953 REMARK 350 BIOMT2 10 0.525661 0.000034 -0.850694 324.34624 REMARK 350 BIOMT3 10 0.723674 -0.525690 0.447152 86.86793 REMARK 350 BIOMT1 11 0.808994 0.587817 -0.000067 -97.11750 REMARK 350 BIOMT2 11 0.587817 -0.808994 -0.000022 298.93265 REMARK 350 BIOMT3 11 -0.000067 -0.000022 -1.000000 489.60633 REMARK 350 BIOMT1 12 0.638129 0.262940 -0.723639 201.35879 REMARK 350 BIOMT2 12 -0.262840 -0.809017 -0.525744 635.86210 REMARK 350 BIOMT3 12 -0.723676 0.525694 -0.447146 402.71453 REMARK 350 BIOMT1 13 -0.138241 0.425395 -0.894387 393.43610 REMARK 350 BIOMT2 13 -0.951045 -0.309052 0.000004 553.24273 REMARK 350 BIOMT3 13 -0.276411 0.850603 0.447293 -5.25615 REMARK 350 BIOMT1 14 -0.447199 0.850675 -0.276343 213.67012 REMARK 350 BIOMT2 14 -0.525722 -0.000034 0.850657 165.25169 REMARK 350 BIOMT3 14 0.723623 0.525693 0.447233 -170.50409 REMARK 350 BIOMT1 15 0.138224 0.951057 0.276377 -89.50867 REMARK 350 BIOMT2 15 0.425348 -0.309015 0.850641 8.07943 REMARK 350 BIOMT3 15 0.894412 -0.000023 -0.447243 135.33774 REMARK 350 BIOMT1 16 -0.947233 -0.162421 -0.276350 584.06679 REMARK 350 BIOMT2 16 -0.162421 -0.500057 0.850625 198.72667 REMARK 350 BIOMT3 16 -0.276350 0.850625 0.447289 -5.27548 REMARK 350 BIOMT1 17 -0.638139 0.262872 0.723655 159.50469 REMARK 350 BIOMT2 17 0.262872 -0.809038 0.525696 249.79447 REMARK 350 BIOMT3 17 0.723655 0.525696 0.447177 -170.49907 REMARK 350 BIOMT1 18 0.447297 0.000002 0.894385 -83.64399 REMARK 350 BIOMT2 18 0.000002 -1.000000 0.000001 489.57309 REMARK 350 BIOMT3 18 0.894385 0.000001 -0.447297 135.35164 REMARK 350 BIOMT1 19 0.809040 -0.587753 -0.000102 190.64396 REMARK 350 BIOMT2 19 -0.587753 -0.809040 0.000033 586.69662 REMARK 350 BIOMT3 19 -0.000102 0.000033 -1.000000 489.60138 REMARK 350 BIOMT1 20 -0.052827 -0.688136 -0.723656 603.31191 REMARK 350 BIOMT2 20 -0.688136 -0.500058 0.525747 406.94365 REMARK 350 BIOMT3 20 -0.723656 0.525747 -0.447115 402.68903 REMARK 350 BIOMT1 21 -0.138262 -0.425335 -0.894412 601.69505 REMARK 350 BIOMT2 21 0.951068 -0.308982 -0.000084 87.63194 REMARK 350 BIOMT3 21 -0.276321 -0.850659 0.447243 411.18097 REMARK 350 BIOMT1 22 -0.947246 0.162419 -0.276306 504.54266 REMARK 350 BIOMT2 22 0.162419 -0.499943 -0.850692 535.65108 REMARK 350 BIOMT3 22 -0.276306 -0.850692 0.447189 411.19870 REMARK 350 BIOMT1 23 -0.447186 0.525661 0.723674 48.42940 REMARK 350 BIOMT2 23 -0.850676 0.000034 -0.525690 581.69919 REMARK 350 BIOMT3 23 -0.276360 -0.850694 0.447152 411.22135 REMARK 350 BIOMT1 24 0.670852 0.162402 0.723591 -136.31170 REMARK 350 BIOMT2 24 -0.688155 0.499999 0.525779 162.13936 REMARK 350 BIOMT3 24 -0.276407 -0.850662 0.447183 411.21761 REMARK 350 BIOMT1 25 0.861778 -0.425346 -0.276442 205.62527 REMARK 350 BIOMT2 25 0.425384 0.309017 0.850621 -143.21099 REMARK 350 BIOMT3 25 -0.276383 -0.850641 0.447239 411.19266 REMARK 350 BIOMT1 26 0.052854 0.688156 0.723635 -113.74161 REMARK 350 BIOMT2 26 -0.688177 -0.500000 0.525750 406.93872 REMARK 350 BIOMT3 26 0.723615 -0.525777 0.447146 86.90508 REMARK 350 BIOMT1 27 0.947239 0.162441 0.276316 -94.48823 REMARK 350 BIOMT2 27 -0.162400 -0.500000 0.850662 198.69848 REMARK 350 BIOMT3 27 0.276340 -0.850654 -0.447239 494.85733 REMARK 350 BIOMT1 28 0.638129 -0.262840 -0.723676 330.07184 REMARK 350 BIOMT2 28 0.262940 -0.809017 0.525694 249.77340 REMARK 350 BIOMT3 28 -0.723639 -0.525744 -0.447146 660.08393 REMARK 350 BIOMT1 29 -0.447297 0.000037 -0.894385 573.21101 REMARK 350 BIOMT2 29 0.000037 -1.000000 -0.000060 489.57967 REMARK 350 BIOMT3 29 -0.894385 -0.000060 0.447297 354.24734 REMARK 350 BIOMT1 30 -0.809017 0.587785 0.000102 298.91921 REMARK 350 BIOMT2 30 -0.587785 -0.809017 -0.000026 586.71319 REMARK 350 BIOMT3 30 0.000067 -0.000081 1.000000 0.00332 REMARK 350 BIOMT1 31 -0.361812 0.262841 0.894431 50.06607 REMARK 350 BIOMT2 31 0.587783 0.809018 0.000027 -97.13939 REMARK 350 BIOMT3 31 -0.723604 0.525741 -0.447206 402.70001 REMARK 350 BIOMT1 32 0.670831 -0.162438 0.723602 -56.79267 REMARK 350 BIOMT2 32 0.688178 0.500001 -0.525747 82.63423 REMARK 350 BIOMT3 32 -0.276400 0.850654 0.447202 -5.24899 REMARK 350 BIOMT1 33 0.670852 -0.688155 -0.276407 316.68537 REMARK 350 BIOMT2 33 0.162402 0.499999 -0.850662 290.87511 REMARK 350 BIOMT3 33 0.723591 0.525779 0.447183 -170.50520 REMARK 350 BIOMT1 34 -0.361779 -0.587787 -0.723618 654.36623 REMARK 350 BIOMT2 34 -0.262940 0.809016 -0.525696 239.80144 REMARK 350 BIOMT3 34 0.894415 0.000082 -0.447237 135.30984 REMARK 350 BIOMT1 35 -1.000000 -0.000040 0.000000 489.58645 REMARK 350 BIOMT2 35 -0.000040 1.000000 0.000059 -0.00471 REMARK 350 BIOMT3 35 0.000000 0.000059 -1.000000 489.57015 REMARK 350 BIOMT1 36 0.447220 -0.525661 -0.723654 441.13397 REMARK 350 BIOMT2 36 -0.850675 -0.000037 -0.525693 581.71678 REMARK 350 BIOMT3 36 0.276310 0.850694 -0.447183 78.38306 REMARK 350 BIOMT1 37 -0.670824 -0.162422 -0.723612 625.89172 REMARK 350 BIOMT2 37 -0.688198 0.499943 0.525777 162.16428 REMARK 350 BIOMT3 37 0.276367 0.850692 -0.447152 78.36208 REMARK 350 BIOMT1 38 -0.861794 0.425334 0.276408 283.96686 REMARK 350 BIOMT2 38 0.425334 0.308984 0.850659 -143.19964 REMARK 350 BIOMT3 38 0.276408 0.850659 -0.447189 78.36905 REMARK 350 BIOMT1 39 0.138224 0.425348 0.894412 -112.11207 REMARK 350 BIOMT2 39 0.951057 -0.309015 -0.000023 87.62759 REMARK 350 BIOMT3 39 0.276377 0.850641 -0.447243 78.39433 REMARK 350 BIOMT1 40 0.947239 -0.162400 0.276340 -14.97746 REMARK 350 BIOMT2 40 0.162441 -0.500000 -0.850654 535.65057 REMARK 350 BIOMT3 40 0.276316 0.850662 -0.447239 78.40299 REMARK 350 BIOMT1 41 -0.138262 0.951068 -0.276321 113.46536 REMARK 350 BIOMT2 41 -0.425335 -0.308982 -0.850659 632.77352 REMARK 350 BIOMT3 41 -0.894412 -0.000084 0.447243 354.27301 REMARK 350 BIOMT1 42 0.309017 0.951057 0.000060 -63.67643 REMARK 350 BIOMT2 42 -0.951057 0.309017 0.000024 401.94536 REMARK 350 BIOMT3 42 0.000004 -0.000065 1.000000 0.01481 REMARK 350 BIOMT1 43 0.670831 0.688178 -0.276400 -20.21960 REMARK 350 BIOMT2 43 -0.162438 0.500001 0.850654 -46.07740 REMARK 350 BIOMT3 43 0.723602 -0.525747 0.447202 86.88738 REMARK 350 BIOMT1 44 0.447165 0.525722 -0.723643 183.78000 REMARK 350 BIOMT2 44 0.850676 0.000037 0.525690 -92.14253 REMARK 350 BIOMT3 44 0.276393 -0.850657 -0.447202 494.83578 REMARK 350 BIOMT1 45 -0.052881 0.688197 -0.723595 266.40184 REMARK 350 BIOMT2 45 0.688197 -0.499942 -0.525779 327.41041 REMARK 350 BIOMT3 45 -0.723595 -0.525779 -0.447177 660.08919 REMARK 350 BIOMT1 46 -0.361812 0.587783 -0.723604 366.60673 REMARK 350 BIOMT2 46 0.262841 0.809018 0.525741 -146.28794 REMARK 350 BIOMT3 46 0.894431 0.000027 -0.447206 135.31191 REMARK 350 BIOMT1 47 -0.309055 0.951044 -0.000004 87.63912 REMARK 350 BIOMT2 47 0.951044 0.309055 -0.000006 -63.66871 REMARK 350 BIOMT3 47 -0.000004 -0.000006 -1.000000 489.58703 REMARK 350 BIOMT1 48 0.447165 0.850676 0.276393 -140.56595 REMARK 350 BIOMT2 48 0.525722 0.000037 -0.850657 324.32166 REMARK 350 BIOMT3 48 -0.723643 0.525690 -0.447202 402.72132 REMARK 350 BIOMT1 49 0.861778 0.425384 -0.276383 -2.63683 REMARK 350 BIOMT2 49 -0.425346 0.309017 -0.850641 481.49365 REMARK 350 BIOMT3 49 -0.276442 0.850621 0.447239 -5.23977 REMARK 350 BIOMT1 50 0.361802 0.262908 -0.894415 310.81312 REMARK 350 BIOMT2 50 -0.587815 0.808995 0.000020 190.64093 REMARK 350 BIOMT3 50 0.723583 0.525744 0.447237 -170.50788 REMARK 350 BIOMT1 51 0.447220 -0.850675 0.276310 275.90977 REMARK 350 BIOMT2 51 -0.525661 -0.000037 0.850694 165.22847 REMARK 350 BIOMT3 51 -0.723654 -0.525693 -0.447183 660.08397 REMARK 350 BIOMT1 52 -0.138241 -0.951045 -0.276411 579.09480 REMARK 350 BIOMT2 52 0.425395 -0.309052 0.850603 8.08624 REMARK 350 BIOMT3 52 -0.894387 0.000004 0.447293 354.23288 REMARK 350 BIOMT1 53 -0.809017 -0.587785 0.000067 586.69208 REMARK 350 BIOMT2 53 0.587785 -0.809017 -0.000081 298.96063 REMARK 350 BIOMT3 53 0.000102 -0.000026 1.000000 -0.01858 REMARK 350 BIOMT1 54 -0.638119 -0.262908 0.723660 288.20244 REMARK 350 BIOMT2 54 -0.262908 -0.808996 -0.525741 635.87312 REMARK 350 BIOMT3 54 0.723660 -0.525741 0.447115 86.89306 REMARK 350 BIOMT1 55 0.138279 -0.425383 0.894387 96.12840 REMARK 350 BIOMT2 55 -0.951056 -0.309019 0.000066 553.22210 REMARK 350 BIOMT3 55 0.276355 -0.850621 -0.447293 494.85887 REMARK 350 BIOMT1 56 0.052854 -0.688177 0.723615 223.17161 REMARK 350 BIOMT2 56 0.688156 -0.500000 -0.525777 327.43401 REMARK 350 BIOMT3 56 0.723635 0.525750 0.447146 -170.49976 REMARK 350 BIOMT1 57 0.138279 -0.951056 0.276355 376.09599 REMARK 350 BIOMT2 57 -0.425383 -0.309019 -0.850621 632.78517 REMARK 350 BIOMT3 57 0.894387 0.000066 -0.447293 135.33440 REMARK 350 BIOMT1 58 -0.308979 -0.951069 -0.000060 553.24693 REMARK 350 BIOMT2 58 -0.951069 0.308979 0.000083 401.94318 REMARK 350 BIOMT3 58 -0.000060 0.000083 -1.000000 489.57901 REMARK 350 BIOMT1 59 -0.670824 -0.688198 0.276367 509.80787 REMARK 350 BIOMT2 59 -0.162422 0.499943 0.850692 -46.07619 REMARK 350 BIOMT3 59 -0.723612 0.525777 -0.447152 402.68006 REMARK 350 BIOMT1 60 -0.447199 -0.525722 0.723623 305.81010 REMARK 350 BIOMT2 60 0.850675 -0.000034 0.525693 -92.12538 REMARK 350 BIOMT3 60 -0.276343 0.850657 0.447233 -5.27106 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 SER D 3 REMARK 465 GLN D 4 REMARK 465 VAL D 5 REMARK 465 SER D 6 REMARK 465 THR D 7 REMARK 465 GLN D 8 REMARK 465 ARG D 9 REMARK 465 SER D 10 REMARK 465 GLY D 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE2 PHE B 82 HD22 LEU B 238 1.28 REMARK 500 O LYS C 7 OG1 THR C 10 2.09 REMARK 500 O LEU C 25 OH TYR D 37 2.09 REMARK 500 OH TYR B 130 O LEU B 166 2.11 REMARK 500 O PRO C 59 NH2 ARG C 68 2.17 REMARK 500 OE1 GLU A 124 OH TYR A 271 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 26 66.28 -163.84 REMARK 500 VAL A 44 76.93 -161.80 REMARK 500 THR A 79 -178.12 -68.89 REMARK 500 ASP A 112 115.10 -161.38 REMARK 500 GLU A 124 2.71 -67.73 REMARK 500 PRO A 186 -179.48 -67.80 REMARK 500 ALA A 198 -168.73 -75.39 REMARK 500 ALA A 200 146.46 -173.62 REMARK 500 MET A 229 92.25 -68.86 REMARK 500 ILE A 262 76.48 60.52 REMARK 500 LEU A 272 -50.82 -121.91 REMARK 500 ALA B 28 -167.95 -123.27 REMARK 500 PRO B 53 -176.37 -69.12 REMARK 500 ASP B 57 -11.38 81.13 REMARK 500 VAL B 58 -48.84 -131.72 REMARK 500 LEU B 66 -66.45 -90.13 REMARK 500 SER B 74 30.82 -98.19 REMARK 500 GLU B 88 30.55 -140.39 REMARK 500 SER B 115 -166.81 -78.44 REMARK 500 ALA B 168 18.33 -148.18 REMARK 500 THR B 187 -63.14 -94.44 REMARK 500 ASN B 189 15.07 -140.73 REMARK 500 ILE B 219 -62.36 -96.61 REMARK 500 ARG B 249 -166.90 -173.89 REMARK 500 GLU C 5 99.79 -163.19 REMARK 500 THR C 16 30.51 -92.14 REMARK 500 GLN C 48 30.48 -94.15 REMARK 500 ASN C 57 48.86 -87.66 REMARK 500 THR C 60 -31.72 -133.21 REMARK 500 SER C 112 -169.30 -162.75 REMARK 500 THR C 122 36.24 -99.00 REMARK 500 THR C 200 -71.37 -116.76 REMARK 500 ASN C 201 176.52 177.89 REMARK 500 ALA C 219 -169.53 -166.98 REMARK 500 LEU C 228 72.19 59.12 REMARK 500 THR C 238 -62.46 -94.71 REMARK 500 HIS D 13 58.61 -93.50 REMARK 500 SER D 16 59.79 -93.00 REMARK 500 THR D 24 35.06 -95.91 REMARK 500 ASP D 49 71.70 -161.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EQ9 A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0943 RELATED DB: EMDB REMARK 900 STRUCTURE OF ENTEROVIRUS 71 IN COMPLEX WITH NLD22 DBREF 6LQD A 1 297 UNP B2ZUN0 B2ZUN0_HE71 566 862 DBREF 6LQD B 1 254 UNP B2ZUN0 B2ZUN0_HE71 70 323 DBREF 6LQD C 1 242 UNP B2ZUN0 B2ZUN0_HE71 324 565 DBREF 6LQD D 1 69 UNP B2ZUN0 B2ZUN0_HE71 1 69 SEQADV 6LQD MET A 225 UNP B2ZUN0 CYS 790 CONFLICT SEQRES 1 A 297 GLY ASP ARG VAL ALA ASP VAL ILE GLU SER SER ILE GLY SEQRES 2 A 297 ASP SER VAL SER ARG ALA LEU THR HIS ALA LEU PRO ALA SEQRES 3 A 297 PRO THR GLY GLN ASN THR GLN VAL SER SER HIS ARG LEU SEQRES 4 A 297 ASP THR GLY LYS VAL PRO ALA LEU GLN ALA ALA GLU ILE SEQRES 5 A 297 GLY ALA SER SER ASN ALA SER ASP GLU SER MET ILE GLU SEQRES 6 A 297 THR ARG CYS VAL LEU ASN SER HIS SER THR ALA GLU THR SEQRES 7 A 297 THR LEU ASP SER PHE PHE SER ARG ALA GLY LEU VAL GLY SEQRES 8 A 297 GLU ILE ASP LEU PRO LEU LYS GLY THR THR ASN PRO ASN SEQRES 9 A 297 GLY TYR ALA ASN TRP ASP ILE ASP ILE THR GLY TYR ALA SEQRES 10 A 297 GLN MET ARG ARG LYS VAL GLU LEU PHE THR TYR MET ARG SEQRES 11 A 297 PHE ASP ALA GLU PHE THR PHE VAL ALA CYS THR PRO THR SEQRES 12 A 297 GLY GLU VAL VAL PRO GLN LEU LEU GLN TYR MET PHE VAL SEQRES 13 A 297 PRO PRO GLY ALA PRO LYS PRO ASP SER ARG GLU SER LEU SEQRES 14 A 297 ALA TRP GLN THR ALA THR ASN PRO SER VAL PHE VAL LYS SEQRES 15 A 297 LEU SER ASP PRO PRO ALA GLN VAL SER VAL PRO PHE MET SEQRES 16 A 297 SER PRO ALA SER ALA TYR GLN TRP PHE TYR ASP GLY TYR SEQRES 17 A 297 PRO THR PHE GLY GLU HIS LYS GLN GLU LYS ASP LEU GLU SEQRES 18 A 297 TYR GLY ALA MET PRO ASN ASN MET MET GLY THR PHE SER SEQRES 19 A 297 VAL ARG THR VAL GLY THR SER LYS SER LYS TYR PRO LEU SEQRES 20 A 297 VAL VAL ARG ILE TYR MET ARG MET LYS HIS VAL ARG ALA SEQRES 21 A 297 TRP ILE PRO ARG PRO MET ARG ASN GLN ASN TYR LEU PHE SEQRES 22 A 297 LYS ALA ASN PRO ASN TYR ALA GLY ASN SER ILE LYS PRO SEQRES 23 A 297 THR GLY ALA SER ARG THR ALA ILE THR THR LEU SEQRES 1 B 254 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 254 ALA GLN LEU THR ILE GLY ASN SER THR ILE THR THR GLN SEQRES 3 B 254 GLU ALA ALA ASN ILE ILE VAL GLY TYR GLY GLU TRP PRO SEQRES 4 B 254 SER TYR CYS SER ASP SER ASP ALA THR ALA VAL ASP LYS SEQRES 5 B 254 PRO THR ARG PRO ASP VAL SER VAL ASN ARG PHE TYR THR SEQRES 6 B 254 LEU ASP THR LYS LEU TRP GLU LYS SER SER LYS GLY TRP SEQRES 7 B 254 TYR TRP LYS PHE PRO ASP VAL LEU THR GLU THR GLY VAL SEQRES 8 B 254 PHE GLY GLN ASN ALA GLN PHE HIS TYR LEU TYR ARG SER SEQRES 9 B 254 GLY PHE CYS ILE HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 B 254 HIS GLN GLY ALA LEU LEU VAL ALA VAL LEU PRO GLU TYR SEQRES 11 B 254 VAL ILE GLY THR VAL ALA GLY GLY THR GLY THR GLU ASP SEQRES 12 B 254 THR HIS PRO PRO TYR LYS GLN THR GLN PRO GLY ALA ASP SEQRES 13 B 254 GLY PHE GLU LEU GLN HIS PRO TYR VAL LEU ASP ALA GLY SEQRES 14 B 254 ILE PRO ILE SER GLN LEU THR VAL CYS PRO HIS GLN TRP SEQRES 15 B 254 ILE ASN LEU ARG THR ASN ASN CYS ALA THR ILE ILE VAL SEQRES 16 B 254 PRO TYR ILE ASN ALA LEU PRO PHE ASP SER ALA LEU ASN SEQRES 17 B 254 HIS CYS ASN PHE GLY LEU LEU VAL VAL PRO ILE SER PRO SEQRES 18 B 254 LEU ASP TYR ASP GLN GLY ALA THR PRO VAL ILE PRO ILE SEQRES 19 B 254 THR ILE THR LEU ALA PRO MET CYS SER GLU PHE ALA GLY SEQRES 20 B 254 LEU ARG GLN ALA VAL THR GLN SEQRES 1 C 242 GLY PHE PRO THR GLU LEU LYS PRO GLY THR ASN GLN PHE SEQRES 2 C 242 LEU THR THR ASP ASP GLY VAL SER ALA PRO ILE LEU PRO SEQRES 3 C 242 ASN PHE HIS PRO THR PRO CYS ILE HIS ILE PRO GLY GLU SEQRES 4 C 242 VAL ARG ASN LEU LEU GLU LEU CYS GLN VAL GLU THR ILE SEQRES 5 C 242 LEU GLU VAL ASN ASN VAL PRO THR ASN ALA THR SER LEU SEQRES 6 C 242 MET GLU ARG LEU ARG PHE PRO VAL SER ALA GLN ALA GLY SEQRES 7 C 242 LYS GLY GLU LEU CYS ALA VAL PHE ARG ALA ASP PRO GLY SEQRES 8 C 242 ARG ASN GLY PRO TRP GLN SER THR LEU LEU GLY GLN LEU SEQRES 9 C 242 CYS GLY TYR TYR THR GLN TRP SER GLY SER LEU GLU VAL SEQRES 10 C 242 THR PHE MET PHE THR GLY SER PHE MET ALA THR GLY LYS SEQRES 11 C 242 MET LEU ILE ALA TYR THR PRO PRO GLY GLY PRO LEU PRO SEQRES 12 C 242 LYS ASP ARG ALA THR ALA MET LEU GLY THR HIS VAL ILE SEQRES 13 C 242 TRP ASP PHE GLY LEU GLN SER SER VAL THR LEU VAL ILE SEQRES 14 C 242 PRO TRP ILE SER ASN THR HIS TYR ARG ALA HIS ALA ARG SEQRES 15 C 242 ASP GLY VAL PHE ASP TYR TYR THR THR GLY LEU VAL SER SEQRES 16 C 242 ILE TRP TYR GLN THR ASN TYR VAL VAL PRO ILE GLY ALA SEQRES 17 C 242 PRO ASN THR ALA TYR ILE ILE ALA LEU ALA ALA ALA GLN SEQRES 18 C 242 LYS ASN PHE THR MET LYS LEU CYS LYS ASP ALA SER ASP SEQRES 19 C 242 ILE LEU GLN THR GLY THR ILE GLN SEQRES 1 D 69 MET GLY SER GLN VAL SER THR GLN ARG SER GLY SER HIS SEQRES 2 D 69 GLU ASN SER ASN SER ALA THR GLU GLY SER THR ILE ASN SEQRES 3 D 69 TYR THR THR ILE ASN TYR TYR LYS ASP SER TYR ALA ALA SEQRES 4 D 69 THR ALA GLY LYS GLN SER LEU LYS GLN ASP PRO ASP LYS SEQRES 5 D 69 PHE ALA ASN PRO VAL LYS ASP ILE PHE THR GLU MET ALA SEQRES 6 D 69 ALA PRO LEU LYS HET EQ9 A 301 57 HETNAM EQ9 1-(2-AZANYLPYRIDIN-4-YL)-3-[5-[4-(5-METHYL-1,2,4- HETNAM 2 EQ9 OXADIAZOL-3-YL)PHENOXY]PENTYL]IMIDAZOLIDIN-2-ONE FORMUL 5 EQ9 C22 H26 N6 O3 HELIX 1 AA1 LEU A 80 SER A 85 1 6 HELIX 2 AA2 TYR A 116 GLU A 124 1 9 HELIX 3 AA3 LEU A 169 THR A 173 5 5 HELIX 4 AA4 LYS A 215 ASP A 219 5 5 HELIX 5 AA5 TYR B 35 GLU B 37 5 3 HELIX 6 AA6 PRO B 83 THR B 87 5 5 HELIX 7 AA7 THR B 89 GLN B 97 1 9 HELIX 8 AA8 PRO B 147 GLN B 152 1 6 HELIX 9 AA9 GLN B 174 CYS B 178 5 5 HELIX 10 AB1 LEU C 43 GLN C 48 1 6 HELIX 11 AB2 SER C 64 ARG C 68 5 5 HELIX 12 AB3 GLY C 94 THR C 99 5 6 HELIX 13 AB4 LEU C 100 CYS C 105 1 6 HELIX 14 AB5 ASP C 145 MET C 150 1 6 HELIX 15 AB6 GLY C 184 THR C 190 5 7 HELIX 16 AB7 ASP D 35 ALA D 39 5 5 HELIX 17 AB8 ASP D 49 PHE D 53 5 5 SHEET 1 AA1 2 LEU A 24 PRO A 25 0 SHEET 2 AA1 2 LYS D 47 GLN D 48 -1 O GLN D 48 N LEU A 24 SHEET 1 AA2 4 GLY A 88 ASP A 94 0 SHEET 2 AA2 4 VAL A 248 MET A 253 -1 O ILE A 251 N VAL A 90 SHEET 3 AA2 4 TYR A 128 CYS A 140 -1 N THR A 136 O TYR A 252 SHEET 4 AA2 4 TYR A 201 GLN A 202 -1 O TYR A 201 N MET A 129 SHEET 1 AA3 3 ALA A 188 VAL A 192 0 SHEET 2 AA3 3 TYR A 128 CYS A 140 -1 N ALA A 133 O VAL A 192 SHEET 3 AA3 3 MET A 255 TRP A 261 -1 O ARG A 259 N ARG A 130 SHEET 1 AA4 4 TYR A 106 ASP A 110 0 SHEET 2 AA4 4 THR A 232 THR A 237 -1 O PHE A 233 N TRP A 109 SHEET 3 AA4 4 LEU A 150 VAL A 156 -1 N VAL A 156 O THR A 232 SHEET 4 AA4 4 VAL A 179 LYS A 182 -1 O VAL A 181 N LEU A 151 SHEET 1 AA5 2 ALA B 14 ILE B 18 0 SHEET 2 AA5 2 SER B 21 THR B 25 -1 O ILE B 23 N LEU B 16 SHEET 1 AA6 5 ILE B 32 VAL B 33 0 SHEET 2 AA6 5 CYS B 190 VAL B 195 1 O ILE B 194 N ILE B 32 SHEET 3 AA6 5 LEU B 101 GLN B 111 -1 N ILE B 108 O ILE B 193 SHEET 4 AA6 5 PRO B 233 ALA B 246 -1 O THR B 237 N HIS B 109 SHEET 5 AA6 5 TYR B 64 LEU B 70 -1 N TYR B 64 O LEU B 238 SHEET 1 AA7 5 PHE B 158 GLU B 159 0 SHEET 2 AA7 5 TRP B 78 PHE B 82 -1 N TYR B 79 O PHE B 158 SHEET 3 AA7 5 PHE B 212 ASP B 223 -1 O PHE B 212 N PHE B 82 SHEET 4 AA7 5 GLN B 119 PRO B 128 -1 N LEU B 127 O GLY B 213 SHEET 5 AA7 5 HIS B 180 TRP B 182 -1 O GLN B 181 N VAL B 124 SHEET 1 AA8 3 THR C 51 ILE C 52 0 SHEET 2 AA8 3 ALA C 212 ALA C 220 -1 O ALA C 218 N THR C 51 SHEET 3 AA8 3 ARG C 70 VAL C 73 -1 N PHE C 71 O ILE C 214 SHEET 1 AA9 4 THR C 51 ILE C 52 0 SHEET 2 AA9 4 ALA C 212 ALA C 220 -1 O ALA C 218 N THR C 51 SHEET 3 AA9 4 LEU C 115 PHE C 121 -1 N MET C 120 O ILE C 215 SHEET 4 AA9 4 SER C 164 ILE C 169 -1 O LEU C 167 N VAL C 117 SHEET 1 AB1 4 LEU C 82 PHE C 86 0 SHEET 2 AB1 4 LEU C 193 VAL C 203 -1 O VAL C 194 N PHE C 86 SHEET 3 AB1 4 THR C 128 THR C 136 -1 N THR C 128 O VAL C 203 SHEET 4 AB1 4 THR C 153 ASP C 158 -1 O THR C 153 N TYR C 135 SHEET 1 AB2 3 ARG C 178 ALA C 179 0 SHEET 2 AB2 3 TYR C 108 TRP C 111 -1 N TRP C 111 O ARG C 178 SHEET 3 AB2 3 MET C 226 CYS C 229 -1 O LEU C 228 N THR C 109 CISPEP 1 PHE B 82 PRO B 83 0 3.79 SITE 1 AC1 13 ILE A 111 ASP A 112 ILE A 113 THR A 114 SITE 2 AC1 13 PHE A 135 PHE A 137 VAL A 179 VAL A 192 SITE 3 AC1 13 MET A 195 TYR A 201 TRP A 203 PHE A 233 SITE 4 AC1 13 ILE C 24 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000