HEADER DNA 28-FEB-20 6M2P TITLE CRYSTAL STRUCTURE OF A NIR-EMITTING DNA-STABILIZED AG16 NANOCLUSTER TITLE 2 (A10-DELETION MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*AP*CP*CP*TP*AP*GP*CP*G)-3'); COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SF FILE CONTAINS FRIEDEL PAIRS. SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS NANOCLUSTER, SILVER, DNA EXPDTA X-RAY DIFFRACTION AUTHOR J.KONDO,C.CERRETANI,T.VOSCH REVDAT 3 29-NOV-23 6M2P 1 REMARK REVDAT 2 22-MAR-23 6M2P 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 FORMUL LINK SITE ATOM REVDAT 1 01-JUL-20 6M2P 0 JRNL AUTH C.CERRETANI,J.KONDO,T.VOSCH JRNL TITL REMOVAL OF THE A10 ADENOSINE IN A DNA-STABILIZED AG16 JRNL TITL 2 NANOCLUSTER. JRNL REF RSC ADV V. 10 23854 2020 JRNL REFN ESSN 2046-2069 JRNL DOI 10.1039/D0RA02672G REMARK 2 REMARK 2 RESOLUTION. 1.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 67302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.086 REMARK 3 R VALUE (WORKING SET) : 0.085 REMARK 3 FREE R VALUE : 0.096 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1400 - 3.4200 1.00 2309 143 0.1174 0.1346 REMARK 3 2 3.4100 - 2.7100 0.99 2343 137 0.1142 0.1345 REMARK 3 3 2.7100 - 2.3700 0.99 2327 140 0.0654 0.0706 REMARK 3 4 2.3700 - 2.1500 0.99 2323 143 0.0609 0.0688 REMARK 3 5 2.1500 - 2.0000 0.99 2320 140 0.0689 0.0712 REMARK 3 6 2.0000 - 1.8800 0.98 2273 146 0.0726 0.0899 REMARK 3 7 1.8800 - 1.7900 0.98 2329 148 0.0697 0.0836 REMARK 3 8 1.7900 - 1.7100 0.99 2320 134 0.0721 0.0785 REMARK 3 9 1.7100 - 1.6400 0.98 2292 153 0.0693 0.0958 REMARK 3 10 1.6400 - 1.5900 0.98 2315 126 0.0687 0.0710 REMARK 3 11 1.5900 - 1.5400 0.98 2270 143 0.0645 0.0846 REMARK 3 12 1.5400 - 1.4900 0.98 2281 150 0.0651 0.0883 REMARK 3 13 1.4900 - 1.4500 0.97 2297 164 0.0624 0.0699 REMARK 3 14 1.4500 - 1.4200 0.97 2228 127 0.0648 0.0851 REMARK 3 15 1.4200 - 1.3900 0.97 2300 137 0.0651 0.0649 REMARK 3 16 1.3900 - 1.3600 0.97 2238 136 0.0691 0.0734 REMARK 3 17 1.3600 - 1.3300 0.97 2268 132 0.0749 0.0957 REMARK 3 18 1.3300 - 1.3000 0.96 2232 160 0.0889 0.0887 REMARK 3 19 1.3000 - 1.2800 0.97 2256 131 0.0876 0.0901 REMARK 3 20 1.2800 - 1.2600 0.96 2207 149 0.0866 0.0907 REMARK 3 21 1.2600 - 1.2400 0.95 2280 136 0.0884 0.0925 REMARK 3 22 1.2400 - 1.2200 0.95 2181 119 0.0936 0.1250 REMARK 3 23 1.2200 - 1.2000 0.95 2180 172 0.1026 0.1141 REMARK 3 24 1.2000 - 1.1800 0.95 2247 131 0.1200 0.1269 REMARK 3 25 1.1800 - 1.1700 0.94 2203 136 0.1325 0.1391 REMARK 3 26 1.1700 - 1.1500 0.94 2138 143 0.1693 0.1900 REMARK 3 27 1.1500 - 1.1400 0.94 2301 142 0.2051 0.2018 REMARK 3 28 1.1400 - 1.1300 0.90 2117 109 0.2379 0.2358 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 6.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 4.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 934 REMARK 3 ANGLE : 1.447 1460 REMARK 3 CHIRALITY : 0.075 180 REMARK 3 PLANARITY : 0.022 46 REMARK 3 DIHEDRAL : 28.815 456 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6M2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300015956. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67312 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.125 REMARK 200 RESOLUTION RANGE LOW (A) : 29.142 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.406 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.24 REMARK 200 R MERGE FOR SHELL (I) : 0.35900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JR4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOPS, MPD, SPERMINE, CALCIUM NITRATE, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 16.85650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT A 5 O3' DT A 5 C3' -0.041 REMARK 500 DC B 3 O3' DC B 3 C3' -0.039 REMARK 500 DC D 3 O3' DC D 3 C3' -0.038 REMARK 500 DT D 5 O3' DT D 5 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 4 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG A 7 O4' - C1' - N9 ANGL. DEV. = 5.8 DEGREES REMARK 500 DC B 4 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC B 4 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG B 7 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DC C 4 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG C 7 O4' - C1' - N9 ANGL. DEV. = 5.8 DEGREES REMARK 500 DC D 4 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG D 7 O4' - C1' - N9 ANGL. DEV. = 5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG A 7 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 101 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 1 O2 REMARK 620 2 DC A 3 N3 94.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 105 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 1 N3 REMARK 620 2 DC B 4 O2 100.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 101 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA A 2 N1 REMARK 620 2 DC B 1 O2 87.5 REMARK 620 3 DC B 3 N3 108.3 89.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 109 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 3 OP1 REMARK 620 2 DC A 8 OP1 64.1 REMARK 620 3 HOH A 223 O 85.9 132.0 REMARK 620 4 DC B 3 OP1 19.8 76.4 66.9 REMARK 620 5 DC B 3 OP1 19.9 76.4 66.8 0.2 REMARK 620 6 HOH B 220 O 88.5 38.1 170.0 106.5 106.6 REMARK 620 7 HOH B 229 O 89.9 59.4 85.6 83.1 83.0 86.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 105 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 3 O2 REMARK 620 2 DC A 4 O2 81.5 REMARK 620 3 DC B 1 N3 82.0 96.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 102 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 4 N3 REMARK 620 2 DG A 9 O6 90.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 106 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 4 O2 REMARK 620 2 DG B 9 N1 86.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 104 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA A 6 OP1 REMARK 620 2 DG A 7 N7 91.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 108 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA A 6 N7 REMARK 620 2 DG A 7 O6 96.4 REMARK 620 3 DA B 6 OP2 89.8 100.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 108 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA A 6 OP2 REMARK 620 2 DA B 6 N7 90.9 REMARK 620 3 DG B 7 O6 91.9 101.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 106 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 9 N1 REMARK 620 2 DC B 4 O2 88.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 102 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC B 4 N3 REMARK 620 2 DG B 9 O6 90.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 104 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA B 6 OP1 REMARK 620 2 DG B 7 N7 99.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG B 107 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 7 O6 REMARK 620 2 DC B 8 O2 77.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 101 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 1 O2 REMARK 620 2 DC C 3 N3 95.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 105 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 1 N3 REMARK 620 2 DC D 4 O2 98.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 101 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA C 2 N1 REMARK 620 2 DC D 1 O2 88.0 REMARK 620 3 DC D 3 N3 108.5 89.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 105 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 3 O2 REMARK 620 2 DC C 4 O2 82.5 REMARK 620 3 DC D 1 N3 83.3 97.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 102 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 4 N3 REMARK 620 2 DG C 9 O6 90.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 106 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 4 O2 REMARK 620 2 DG D 9 N1 86.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 104 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA C 6 OP1 REMARK 620 2 DG C 7 N7 92.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 108 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA C 6 N7 REMARK 620 2 DG C 7 O6 94.2 REMARK 620 3 DA D 6 OP2 90.4 100.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 108 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA C 6 OP2 REMARK 620 2 DA D 6 N7 90.5 REMARK 620 3 DG D 7 O6 91.9 99.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 107 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG C 7 O6 REMARK 620 2 DC C 8 O2 74.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 109 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 8 OP1 REMARK 620 2 DC D 3 OP1 52.7 REMARK 620 3 DG D 7 OP1 62.2 39.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 109 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 8 OP1 REMARK 620 2 DC D 3 OP1 32.3 REMARK 620 3 DG D 7 OP1 63.7 38.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG C 106 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG C 9 N1 REMARK 620 2 DC D 4 O2 88.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 102 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC D 4 N3 REMARK 620 2 DG D 9 O6 91.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 104 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA D 6 OP1 REMARK 620 2 DG D 7 N7 99.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG D 107 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG D 7 O6 REMARK 620 2 DC D 8 O2 76.9 REMARK 620 N 1 DBREF 6M2P A 1 9 PDB 6M2P 6M2P 1 9 DBREF 6M2P B 1 9 PDB 6M2P 6M2P 1 9 DBREF 6M2P C 1 9 PDB 6M2P 6M2P 1 9 DBREF 6M2P D 1 9 PDB 6M2P 6M2P 1 9 SEQRES 1 A 9 DC DA DC DC DT DA DG DC DG SEQRES 1 B 9 DC DA DC DC DT DA DG DC DG SEQRES 1 C 9 DC DA DC DC DT DA DG DC DG SEQRES 1 D 9 DC DA DC DC DT DA DG DC DG HET AG A 101 1 HET AG A 102 1 HET AG A 103 1 HET AG A 104 1 HET AG A 105 1 HET AG A 106 1 HET AG A 107 1 HET AG A 108 1 HET CA A 109 1 HET CL A 110 1 HET AG B 101 1 HET AG B 102 1 HET AG B 103 1 HET AG B 104 1 HET AG B 105 1 HET AG B 106 1 HET AG B 107 1 HET AG B 108 1 HET CL B 109 1 HET AG C 101 1 HET AG C 102 1 HET AG C 103 1 HET AG C 104 1 HET AG C 105 1 HET AG C 106 1 HET AG C 107 1 HET AG C 108 1 HET CL C 109 1 HET AG D 101 1 HET AG D 102 1 HET AG D 103 1 HET AG D 104 1 HET AG D 105 1 HET AG D 106 1 HET AG D 107 1 HET AG D 108 1 HET CA D 109 2 HET CL D 110 1 HETNAM AG SILVER ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 5 AG 32(AG 1+) FORMUL 13 CA 2(CA 2+) FORMUL 14 CL 4(CL 1-) FORMUL 43 HOH *103(H2 O) LINK O2 DC A 1 AG AG A 101 1555 1555 2.43 LINK N3 DC A 1 AG AG A 105 1555 1555 2.29 LINK N1 DA A 2 AG AG B 101 1555 1555 2.48 LINK N3 DC A 3 AG AG A 101 1555 1555 2.25 LINK OP1 DC A 3 CA CA A 109 1555 1555 2.32 LINK O2 DC A 3 AG AG B 105 1555 1555 2.59 LINK N3 DC A 4 AG AG A 102 1555 1555 2.37 LINK O2 DC A 4 AG AG B 105 1555 1555 2.54 LINK O2 DC A 4 AG AG B 106 1555 1555 2.54 LINK OP1 DA A 6 AG AG A 104 1555 1555 2.37 LINK N7 DA A 6 AG AG A 108 1555 1555 2.29 LINK OP2 DA A 6 AG AG B 108 1555 1555 2.32 LINK N7 DG A 7 AG AG A 104 1555 1555 2.27 LINK O6 DG A 7 AG AG A 107 1555 1555 2.62 LINK O6 DG A 7 AG AG A 108 1555 1555 2.47 LINK N3 DC A 8 AG AG A 103 1555 1555 2.21 LINK OP1 DC A 8 CA CA A 109 1555 2845 2.33 LINK O6 DG A 9 AG AG A 102 1555 1555 2.38 LINK N1 DG A 9 AG AG A 106 1555 1555 2.29 LINK AG AG A 105 O2 DC B 4 1555 1555 2.48 LINK AG AG A 106 O2 DC B 4 1555 1555 2.65 LINK AG AG A 108 OP2 DA B 6 1555 1555 2.39 LINK CA CA A 109 O HOH A 223 1555 1555 2.39 LINK CA CA A 109 OP1A DC B 3 1455 1555 2.27 LINK CA CA A 109 OP1B DC B 3 1455 1555 2.22 LINK CA CA A 109 O HOH B 220 1555 1655 2.35 LINK CA CA A 109 O HOH B 229 1555 1655 2.37 LINK O2 DC B 1 AG AG B 101 1555 1555 2.52 LINK N3 DC B 1 AG AG B 105 1555 1555 2.30 LINK N3 DC B 3 AG AG B 101 1555 1555 2.29 LINK N3 DC B 4 AG AG B 102 1555 1555 2.38 LINK OP1 DA B 6 AG AG B 104 1555 1555 2.38 LINK N7 DA B 6 AG AG B 108 1555 1555 2.25 LINK N7 DG B 7 AG AG B 104 1555 1555 2.35 LINK O6 DG B 7 AG AG B 107 1555 1555 2.55 LINK O6 DG B 7 AG AG B 108 1555 1555 2.47 LINK N3 DC B 8 AG AG B 103 1555 1555 2.23 LINK O2 DC B 8 AG AG B 107 1555 1555 2.62 LINK O6 DG B 9 AG AG B 102 1555 1555 2.36 LINK N1 DG B 9 AG AG B 106 1555 1555 2.30 LINK O2 DC C 1 AG AG C 101 1555 1555 2.44 LINK N3 DC C 1 AG AG C 105 1555 1555 2.30 LINK N1 DA C 2 AG AG D 101 1555 1555 2.50 LINK N3 DC C 3 AG AG C 101 1555 1555 2.23 LINK O2 DC C 3 AG AG D 105 1555 1555 2.63 LINK N3 DC C 4 AG AG C 102 1555 1555 2.35 LINK O2 DC C 4 AG AG D 105 1555 1555 2.51 LINK O2 DC C 4 AG AG D 106 1555 1555 2.54 LINK OP1 DA C 6 AG AG C 104 1555 1555 2.34 LINK N7 DA C 6 AG AG C 108 1555 1555 2.30 LINK OP2 DA C 6 AG AG D 108 1555 1555 2.30 LINK N7 DG C 7 AG AG C 104 1555 1555 2.29 LINK O6 DG C 7 AG AG C 107 1555 1555 2.67 LINK O6 DG C 7 AG AG C 108 1555 1555 2.45 LINK N3 DC C 8 AG AG C 103 1555 1555 2.21 LINK O2 DC C 8 AG AG C 107 1555 1555 2.69 LINK OP1 DC C 8 CA A CA D 109 1555 2856 2.40 LINK OP1 DC C 8 CA B CA D 109 1555 2856 2.42 LINK O6 DG C 9 AG AG C 102 1555 1555 2.39 LINK N1 DG C 9 AG AG C 106 1555 1555 2.29 LINK AG AG C 105 O2 DC D 4 1555 1555 2.48 LINK AG AG C 106 O2 DC D 4 1555 1555 2.60 LINK AG AG C 108 OP2 DA D 6 1555 1555 2.37 LINK O2 DC D 1 AG AG D 101 1555 1555 2.50 LINK N3 DC D 1 AG AG D 105 1555 1555 2.29 LINK N3 DC D 3 AG AG D 101 1555 1555 2.30 LINK OP1A DC D 3 CA A CA D 109 1555 1555 1.99 LINK OP1B DC D 3 CA B CA D 109 1555 1555 2.61 LINK N3 DC D 4 AG AG D 102 1555 1555 2.36 LINK OP1 DA D 6 AG AG D 104 1555 1555 2.31 LINK N7 DA D 6 AG AG D 108 1555 1555 2.30 LINK N7 DG D 7 AG AG D 104 1555 1555 2.33 LINK O6 DG D 7 AG AG D 107 1555 1555 2.55 LINK O6 DG D 7 AG AG D 108 1555 1555 2.45 LINK OP1 DG D 7 CA A CA D 109 1555 2756 2.06 LINK OP1 DG D 7 CA B CA D 109 1555 2756 2.51 LINK N3 DC D 8 AG AG D 103 1555 1555 2.22 LINK O2 DC D 8 AG AG D 107 1555 1555 2.62 LINK O6 DG D 9 AG AG D 102 1555 1555 2.35 LINK N1 DG D 9 AG AG D 106 1555 1555 2.31 CRYST1 24.211 33.713 58.551 90.00 98.11 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.041304 0.000000 0.005889 0.00000 SCALE2 0.000000 0.029662 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017252 0.00000