HEADER MEMBRANE PROTEIN 02-MAR-20 6M38 TITLE X-RAY STRUCTURE OF A DROSOPHILA DOPAMINE TRANSPORTER WITH SUBSITEB TITLE 2 MUTATIONS (D121G/S426M) IN S-DULOXETINE BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM-DEPENDENT DOPAMINE TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN FUMIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY FRAGMENT 9D5 LIGHT CHAIN; COMPND 9 CHAIN: L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ANTIBODY FRAGMENT 9D5 HEAVY CHAIN; COMPND 13 CHAIN: H; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DAT, FMN, CG8380; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 GNTI-; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 19 ORGANISM_COMMON: MOUSE; SOURCE 20 ORGANISM_TAXID: 10090; SOURCE 21 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 23 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NEUROTRANSMITTER TRANSPORTER, ANTIBODY FRAGMENT, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.SHABAREESH,A.K.MALLELA,D.JOSEPH,A.PENMATSA REVDAT 4 06-NOV-24 6M38 1 REMARK REVDAT 3 29-NOV-23 6M38 1 REMARK REVDAT 2 28-APR-21 6M38 1 JRNL REVDAT 1 17-FEB-21 6M38 0 JRNL AUTH S.PIDATHALA,A.K.MALLELA,D.JOSEPH,A.PENMATSA JRNL TITL STRUCTURAL BASIS OF NOREPINEPHRINE RECOGNITION AND TRANSPORT JRNL TITL 2 INHIBITION IN NEUROTRANSMITTER TRANSPORTERS. JRNL REF NAT COMMUN V. 12 2199 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33850134 JRNL DOI 10.1038/S41467-021-22385-9 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 46693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6400 - 7.7066 0.99 2806 127 0.2315 0.2283 REMARK 3 2 7.7066 - 6.1208 1.00 2661 151 0.2024 0.2354 REMARK 3 3 6.1208 - 5.3482 1.00 2647 150 0.2071 0.2112 REMARK 3 4 5.3482 - 4.8597 1.00 2634 128 0.1826 0.2273 REMARK 3 5 4.8597 - 4.5116 1.00 2625 136 0.1708 0.2005 REMARK 3 6 4.5116 - 4.2458 1.00 2598 159 0.1777 0.2502 REMARK 3 7 4.2458 - 4.0333 1.00 2621 130 0.1940 0.2300 REMARK 3 8 4.0333 - 3.8578 1.00 2596 136 0.2053 0.2054 REMARK 3 9 3.8578 - 3.7093 1.00 2599 125 0.2110 0.2700 REMARK 3 10 3.7093 - 3.5813 1.00 2569 141 0.2278 0.2729 REMARK 3 11 3.5813 - 3.4694 1.00 2607 133 0.2455 0.2847 REMARK 3 12 3.4694 - 3.3702 1.00 2572 140 0.2513 0.2969 REMARK 3 13 3.3702 - 3.2815 1.00 2570 143 0.2588 0.3003 REMARK 3 14 3.2815 - 3.2015 1.00 2609 115 0.2674 0.2983 REMARK 3 15 3.2015 - 3.1287 1.00 2557 153 0.2752 0.3096 REMARK 3 16 3.1287 - 3.0622 1.00 2590 123 0.3028 0.3209 REMARK 3 17 3.0622 - 3.0010 0.98 2516 126 0.3414 0.3655 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6M38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300015978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46777 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.644 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.39400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XNX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MOPS PH 7.0, 30% PEG 600, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.64400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.90900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.32050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.90900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.64400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.32050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 305 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 439 CG CD CE NZ REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 587 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 189 CG CD NE CZ NH1 NH2 REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 470 THR H 137 OG1 CG2 REMARK 470 THR H 138 OG1 CG2 REMARK 470 ARG H 219 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 46 -156.37 -139.88 REMARK 500 ARG A 52 -46.98 -138.51 REMARK 500 ASN A 60 60.56 -117.87 REMARK 500 TRP A 145 20.29 -78.65 REMARK 500 HIS A 204 33.16 -140.79 REMARK 500 PHE A 252 1.72 -66.24 REMARK 500 VAL A 391 -57.68 -132.28 REMARK 500 ALA A 479 28.14 -140.86 REMARK 500 ALA A 548 -130.03 53.59 REMARK 500 GLU L 17 -177.07 -67.25 REMARK 500 THR L 52 -51.70 74.25 REMARK 500 GLU L 82 1.65 -67.86 REMARK 500 ASP L 152 -120.81 52.10 REMARK 500 LYS L 170 -60.77 -94.25 REMARK 500 ASN L 191 17.31 -140.71 REMARK 500 THR L 201 -71.67 -55.83 REMARK 500 ASN L 213 -60.22 -97.04 REMARK 500 GLN H 103 13.14 -69.95 REMARK 500 LEU H 130 78.81 -100.46 REMARK 500 PRO H 132 -177.22 -69.13 REMARK 500 CYS H 134 43.01 -98.66 REMARK 500 PHE H 152 138.25 -172.80 REMARK 500 PRO H 218 40.05 -92.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 605 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 42 O REMARK 620 2 VAL A 45 O 90.5 REMARK 620 3 LEU A 417 O 162.5 89.7 REMARK 620 4 ASP A 420 OD1 76.0 114.8 88.0 REMARK 620 5 SER A 421 OG 86.1 115.4 109.6 126.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 603 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 44 O REMARK 620 2 ASN A 49 OD1 96.1 REMARK 620 3 SER A 320 O 75.8 161.0 REMARK 620 4 SER A 320 OG 125.9 90.6 80.9 REMARK 620 5 ASN A 352 OD1 63.0 81.3 79.7 65.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 29E A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y01 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMU A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 607 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6M0Z RELATED DB: PDB REMARK 900 RELATED ID: 6M0F RELATED DB: PDB REMARK 900 RELATED ID: 6M2R RELATED DB: PDB DBREF 6M38 A 25 599 UNP Q7K4Y6 DAT_DROME 25 599 DBREF 6M38 L 1 214 PDB 6M38 6M38 1 214 DBREF 6M38 H 1 219 PDB 6M38 6M38 1 219 SEQADV 6M38 ALA A 74 UNP Q7K4Y6 VAL 74 ENGINEERED MUTATION SEQADV 6M38 GLY A 121 UNP Q7K4Y6 ASP 121 ENGINEERED MUTATION SEQADV 6M38 A UNP Q7K4Y6 SER 162 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLN 163 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASN 164 DELETION SEQADV 6M38 A UNP Q7K4Y6 ALA 165 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 166 DELETION SEQADV 6M38 A UNP Q7K4Y6 ARG 167 DELETION SEQADV 6M38 A UNP Q7K4Y6 VAL 168 DELETION SEQADV 6M38 A UNP Q7K4Y6 PRO 169 DELETION SEQADV 6M38 A UNP Q7K4Y6 VAL 170 DELETION SEQADV 6M38 A UNP Q7K4Y6 ILE 171 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLY 172 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASN 173 DELETION SEQADV 6M38 A UNP Q7K4Y6 TYR 174 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 175 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASP 176 DELETION SEQADV 6M38 A UNP Q7K4Y6 LEU 177 DELETION SEQADV 6M38 A UNP Q7K4Y6 TYR 178 DELETION SEQADV 6M38 A UNP Q7K4Y6 ALA 179 DELETION SEQADV 6M38 A UNP Q7K4Y6 MET 180 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLY 181 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASN 182 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLN 183 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 184 DELETION SEQADV 6M38 A UNP Q7K4Y6 LEU 185 DELETION SEQADV 6M38 A UNP Q7K4Y6 LEU 186 DELETION SEQADV 6M38 A UNP Q7K4Y6 TYR 187 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASN 188 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLU 189 DELETION SEQADV 6M38 A UNP Q7K4Y6 THR 190 DELETION SEQADV 6M38 A UNP Q7K4Y6 TYR 191 DELETION SEQADV 6M38 A UNP Q7K4Y6 MET 192 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASN 193 DELETION SEQADV 6M38 A UNP Q7K4Y6 GLY 194 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 195 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 196 DELETION SEQADV 6M38 A UNP Q7K4Y6 LEU 197 DELETION SEQADV 6M38 A UNP Q7K4Y6 ASP 198 DELETION SEQADV 6M38 A UNP Q7K4Y6 THR 199 DELETION SEQADV 6M38 A UNP Q7K4Y6 SER 200 DELETION SEQADV 6M38 A UNP Q7K4Y6 ALA 201 DELETION SEQADV 6M38 A UNP Q7K4Y6 VAL 202 DELETION SEQADV 6M38 ALA A 415 UNP Q7K4Y6 LEU 415 ENGINEERED MUTATION SEQADV 6M38 MET A 426 UNP Q7K4Y6 SER 426 ENGINEERED MUTATION SEQRES 1 A 534 ASP GLU ARG GLU THR TRP SER GLY LYS VAL ASP PHE LEU SEQRES 2 A 534 LEU SER VAL ILE GLY PHE ALA VAL ASP LEU ALA ASN VAL SEQRES 3 A 534 TRP ARG PHE PRO TYR LEU CYS TYR LYS ASN GLY GLY GLY SEQRES 4 A 534 ALA PHE LEU VAL PRO TYR GLY ILE MET LEU ALA VAL GLY SEQRES 5 A 534 GLY ILE PRO LEU PHE TYR MET GLU LEU ALA LEU GLY GLN SEQRES 6 A 534 HIS ASN ARG LYS GLY ALA ILE THR CYS TRP GLY ARG LEU SEQRES 7 A 534 VAL PRO LEU PHE LYS GLY ILE GLY TYR ALA VAL VAL LEU SEQRES 8 A 534 ILE ALA PHE TYR VAL GLY PHE TYR TYR ASN VAL ILE ILE SEQRES 9 A 534 ALA TRP SER LEU ARG PHE PHE PHE ALA SER PHE THR ASN SEQRES 10 A 534 SER LEU PRO TRP THR SER CYS ASN ASN ILE TRP ASN THR SEQRES 11 A 534 PRO ASN CYS ARG PRO PHE GLU GLY HIS VAL GLU GLY PHE SEQRES 12 A 534 GLN SER ALA ALA SER GLU TYR PHE ASN ARG TYR ILE LEU SEQRES 13 A 534 GLU LEU ASN ARG SER GLU GLY ILE HIS ASP LEU GLY ALA SEQRES 14 A 534 ILE LYS TRP ASP MET ALA LEU CYS LEU LEU ILE VAL TYR SEQRES 15 A 534 LEU ILE CYS TYR PHE SER LEU TRP LYS GLY ILE SER THR SEQRES 16 A 534 SER GLY LYS VAL VAL TRP PHE THR ALA LEU PHE PRO TYR SEQRES 17 A 534 ALA VAL LEU LEU ILE LEU LEU ILE ARG GLY LEU THR LEU SEQRES 18 A 534 PRO GLY SER PHE LEU GLY ILE GLN TYR TYR LEU THR PRO SEQRES 19 A 534 ASN PHE SER ALA ILE TYR LYS ALA GLU VAL TRP VAL ASP SEQRES 20 A 534 ALA ALA THR GLN VAL PHE PHE SER LEU GLY PRO GLY PHE SEQRES 21 A 534 GLY VAL LEU LEU ALA TYR ALA SER TYR ASN LYS TYR HIS SEQRES 22 A 534 ASN ASN VAL TYR LYS ASP ALA LEU LEU THR SER PHE ILE SEQRES 23 A 534 ASN SER ALA THR SER PHE ILE ALA GLY PHE VAL ILE PHE SEQRES 24 A 534 SER VAL LEU GLY TYR MET ALA HIS THR LEU GLY VAL ARG SEQRES 25 A 534 ILE GLU ASP VAL ALA THR GLU GLY PRO GLY LEU VAL PHE SEQRES 26 A 534 VAL VAL TYR PRO ALA ALA ILE ALA THR MET PRO ALA SER SEQRES 27 A 534 THR PHE TRP ALA LEU ILE PHE PHE MET MET LEU ALA THR SEQRES 28 A 534 LEU GLY LEU ASP SER SER PHE GLY GLY MET GLU ALA ILE SEQRES 29 A 534 ILE THR ALA LEU SER ASP GLU PHE PRO LYS ILE LYS ARG SEQRES 30 A 534 ASN ARG GLU LEU PHE VAL ALA GLY LEU PHE SER LEU TYR SEQRES 31 A 534 PHE VAL VAL GLY LEU ALA SER CYS THR GLN GLY GLY PHE SEQRES 32 A 534 TYR PHE PHE HIS LEU LEU ASP ARG TYR ALA ALA GLY TYR SEQRES 33 A 534 SER ILE LEU VAL ALA VAL PHE PHE GLU ALA ILE ALA VAL SEQRES 34 A 534 SER TRP ILE TYR GLY THR ASN ARG PHE SER GLU ASP ILE SEQRES 35 A 534 ARG ASP MET ILE GLY PHE PRO PRO GLY ARG TYR TRP GLN SEQRES 36 A 534 VAL CYS TRP ARG PHE VAL ALA PRO ILE PHE LEU LEU PHE SEQRES 37 A 534 ILE THR VAL TYR GLY LEU ILE GLY TYR GLU PRO LEU THR SEQRES 38 A 534 TYR ALA ASP TYR VAL TYR PRO SER TRP ALA ASN ALA LEU SEQRES 39 A 534 GLY TRP CYS ILE ALA GLY SER SER VAL VAL MET ILE PRO SEQRES 40 A 534 ALA VAL ALA ILE PHE LYS LEU LEU SER THR PRO GLY SER SEQRES 41 A 534 LEU ARG GLN ARG PHE THR ILE LEU THR THR PRO TRP ARG SEQRES 42 A 534 ASP SEQRES 1 L 214 GLU ASN VAL LEU THR GLN SER PRO ALA ILE MET SER THR SEQRES 2 L 214 SER PRO GLY GLU LYS VAL THR MET THR CYS ARG ALA SER SEQRES 3 L 214 SER SER VAL GLY SER SER TYR LEU HIS TRP TYR GLN GLN SEQRES 4 L 214 LYS SER GLY ALA SER PRO LYS LEU TRP ILE TYR SER THR SEQRES 5 L 214 SER ASN LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SEQRES 6 L 214 SER GLY SER GLY THR SER TYR SER LEU THR ILE SER SER SEQRES 7 L 214 VAL GLU ALA GLU ASP ALA ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 214 PHE SER GLY TYR PRO LEU THR PHE GLY SER GLY THR LYS SEQRES 9 L 214 LEU GLU MET LYS ARG ALA ASP ALA ALA PRO THR VAL SER SEQRES 10 L 214 ILE PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY SEQRES 11 L 214 ALA SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS SEQRES 12 L 214 ASP ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG SEQRES 13 L 214 GLN ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER SEQRES 14 L 214 LYS ASP SER THR TYR SER MET SER SER THR LEU THR LEU SEQRES 15 L 214 THR LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS SEQRES 16 L 214 GLU ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SEQRES 17 L 214 SER PHE ASN ARG ASN GLU SEQRES 1 H 219 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 219 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 219 PHE THR PHE SER SER TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 H 219 SER PRO GLU LYS ARG LEU GLU TRP VAL ALA GLU ILE SER SEQRES 5 H 219 SER GLY GLY ARG TYR ILE TYR TYR SER ASP THR VAL THR SEQRES 6 H 219 GLY ARG PHE THR ILE SER ARG ASP ASN ALA ARG ASN ILE SEQRES 7 H 219 LEU HIS LEU GLU MET SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 219 ALA MET TYR TYR CYS ALA ARG GLY GLU VAL ARG GLN ARG SEQRES 9 H 219 GLY PHE ASP TYR TRP GLY GLN GLY THR THR LEU THR VAL SEQRES 10 H 219 SER SER ALA LYS THR THR ALA PRO SER VAL TYR PRO LEU SEQRES 11 H 219 ALA PRO VAL CYS GLY ASP THR THR GLY SER SER VAL THR SEQRES 12 H 219 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 219 THR LEU THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 219 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 219 LEU SER SER SER VAL THR VAL THR SER SER THR TRP PRO SEQRES 16 H 219 SER GLN SER ILE THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 219 SER THR LYS VAL ASP LYS LYS ILE GLU PRO ARG HET 29E A 601 21 HET Y01 A 602 35 HET NA A 603 1 HET CL A 604 1 HET NA A 605 1 HET DMU A 606 33 HET CLR A 607 28 HETNAM 29E (3S)-N-METHYL-3-(NAPHTHALEN-1-YLOXY)-3-(THIOPHEN-2-YL) HETNAM 2 29E PROPAN-1-AMINE HETNAM Y01 CHOLESTEROL HEMISUCCINATE HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM DMU DECYL-BETA-D-MALTOPYRANOSIDE HETNAM CLR CHOLESTEROL HETSYN 29E DULOXETINE HETSYN DMU DECYLMALTOSIDE FORMUL 4 29E C18 H19 N O S FORMUL 5 Y01 C31 H50 O4 FORMUL 6 NA 2(NA 1+) FORMUL 7 CL CL 1- FORMUL 9 DMU C22 H42 O11 FORMUL 10 CLR C27 H46 O FORMUL 11 HOH *24(H2 O) HELIX 1 AA1 GLY A 32 VAL A 45 1 14 HELIX 2 AA2 LEU A 47 ARG A 52 1 6 HELIX 3 AA3 ARG A 52 ASN A 60 1 9 HELIX 4 AA4 GLY A 61 ALA A 64 5 4 HELIX 5 AA5 PHE A 65 GLY A 76 1 12 HELIX 6 AA6 GLY A 76 ARG A 92 1 17 HELIX 7 AA7 GLY A 94 ARG A 101 1 8 HELIX 8 AA8 VAL A 103 LEU A 105 5 3 HELIX 9 AA9 PHE A 106 GLY A 121 1 16 HELIX 10 AB1 TYR A 123 SER A 138 1 16 HELIX 11 AB2 LEU A 143 SER A 147 5 5 HELIX 12 AB3 SER A 210 TYR A 219 1 10 HELIX 13 AB4 GLU A 222 SER A 226 5 5 HELIX 14 AB5 LYS A 236 TRP A 255 1 20 HELIX 15 AB6 GLY A 257 LEU A 286 1 30 HELIX 16 AB7 GLY A 288 THR A 298 1 11 HELIX 17 AB8 LYS A 306 LEU A 321 1 16 HELIX 18 AB9 GLY A 326 SER A 333 1 8 HELIX 19 AC1 ASN A 340 LEU A 374 1 35 HELIX 20 AC2 ARG A 377 ALA A 382 1 6 HELIX 21 AC3 GLY A 385 VAL A 391 1 7 HELIX 22 AC4 VAL A 391 MET A 400 1 10 HELIX 23 AC5 ALA A 402 ASP A 435 1 34 HELIX 24 AC6 PHE A 437 ARG A 442 1 6 HELIX 25 AC7 ASN A 443 LEU A 460 1 18 HELIX 26 AC8 ALA A 461 THR A 464 5 4 HELIX 27 AC9 GLY A 466 ALA A 478 1 13 HELIX 28 AD1 GLY A 480 TRP A 496 1 17 HELIX 29 AD2 GLY A 499 GLY A 512 1 14 HELIX 30 AD3 GLY A 516 PHE A 525 1 10 HELIX 31 AD4 PHE A 525 GLY A 541 1 17 HELIX 32 AD5 PRO A 553 VAL A 569 1 17 HELIX 33 AD6 VAL A 569 LEU A 580 1 12 HELIX 34 AD7 SER A 585 THR A 594 1 10 HELIX 35 AD8 GLY L 30 SER L 32 5 3 HELIX 36 AD9 GLU L 80 ALA L 84 5 5 HELIX 37 AE1 SER L 122 GLY L 129 1 8 HELIX 38 AE2 LYS L 184 ARG L 189 1 6 HELIX 39 AE3 THR H 28 TYR H 32 5 5 HELIX 40 AE4 ARG H 87 THR H 91 5 5 HELIX 41 AE5 VAL H 101 GLY H 105 5 5 HELIX 42 AE6 SER H 162 SER H 164 5 3 HELIX 43 AE7 PRO H 206 SER H 209 5 4 SHEET 1 AA1 2 THR A 546 TYR A 547 0 SHEET 2 AA1 2 TYR A 550 VAL A 551 -1 O TYR A 550 N TYR A 547 SHEET 1 AA2 4 LEU L 4 SER L 7 0 SHEET 2 AA2 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA2 4 SER L 71 ILE L 76 -1 O LEU L 74 N MET L 21 SHEET 4 AA2 4 PHE L 63 SER L 68 -1 N SER L 66 O SER L 73 SHEET 1 AA3 6 ILE L 10 THR L 13 0 SHEET 2 AA3 6 THR L 103 MET L 107 1 O GLU L 106 N MET L 11 SHEET 3 AA3 6 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AA3 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AA3 6 PRO L 45 TYR L 50 -1 O ILE L 49 N TRP L 36 SHEET 6 AA3 6 ASN L 54 LEU L 55 -1 O ASN L 54 N TYR L 50 SHEET 1 AA4 4 ILE L 10 THR L 13 0 SHEET 2 AA4 4 THR L 103 MET L 107 1 O GLU L 106 N MET L 11 SHEET 3 AA4 4 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AA4 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 91 SHEET 1 AA5 4 THR L 115 PHE L 119 0 SHEET 2 AA5 4 GLY L 130 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AA5 4 TYR L 174 THR L 183 -1 O LEU L 182 N ALA L 131 SHEET 4 AA5 4 VAL L 160 TRP L 164 -1 N LEU L 161 O THR L 179 SHEET 1 AA6 4 SER L 154 ARG L 156 0 SHEET 2 AA6 4 ASN L 146 ILE L 151 -1 N ILE L 151 O SER L 154 SHEET 3 AA6 4 SER L 192 THR L 198 -1 O THR L 198 N ASN L 146 SHEET 4 AA6 4 ILE L 206 ASN L 211 -1 O ILE L 206 N ALA L 197 SHEET 1 AA7 4 GLN H 3 SER H 7 0 SHEET 2 AA7 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA7 4 ILE H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA7 4 THR H 69 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA8 6 LEU H 11 VAL H 12 0 SHEET 2 AA8 6 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA8 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AA8 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA8 6 LEU H 45 ILE H 51 -1 O ILE H 51 N MET H 34 SHEET 6 AA8 6 ILE H 58 TYR H 60 -1 O TYR H 59 N GLU H 50 SHEET 1 AA9 4 LEU H 11 VAL H 12 0 SHEET 2 AA9 4 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA9 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AA9 4 TYR H 108 TRP H 109 -1 O TYR H 108 N ARG H 98 SHEET 1 AB1 4 SER H 126 LEU H 130 0 SHEET 2 AB1 4 SER H 141 TYR H 151 -1 O LEU H 147 N TYR H 128 SHEET 3 AB1 4 LEU H 180 THR H 190 -1 O LEU H 183 N VAL H 148 SHEET 4 AB1 4 VAL H 169 GLN H 177 -1 N HIS H 170 O SER H 186 SHEET 1 AB2 3 THR H 157 TRP H 160 0 SHEET 2 AB2 3 THR H 200 HIS H 205 -1 O ASN H 202 N THR H 159 SHEET 3 AB2 3 THR H 210 LYS H 215 -1 O LYS H 214 N CYS H 201 SSBOND 1 CYS A 148 CYS A 157 1555 1555 2.06 SSBOND 2 CYS L 23 CYS L 89 1555 1555 2.08 SSBOND 3 CYS L 135 CYS L 195 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.12 SSBOND 5 CYS H 146 CYS H 201 1555 1555 2.04 LINK O GLY A 42 NA NA A 605 1555 1555 2.24 LINK O ALA A 44 NA NA A 603 1555 1555 2.42 LINK O VAL A 45 NA NA A 605 1555 1555 2.45 LINK OD1 ASN A 49 NA NA A 603 1555 1555 2.41 LINK O SER A 320 NA NA A 603 1555 1555 2.52 LINK OG SER A 320 NA NA A 603 1555 1555 2.54 LINK OD1 ASN A 352 NA NA A 603 1555 1555 3.18 LINK O LEU A 417 NA NA A 605 1555 1555 2.27 LINK OD1 ASP A 420 NA NA A 605 1555 1555 2.34 LINK OG SER A 421 NA NA A 605 1555 1555 2.30 CISPEP 1 SER L 7 PRO L 8 0 -6.06 CISPEP 2 TYR L 95 PRO L 96 0 3.95 CISPEP 3 TYR L 141 PRO L 142 0 1.18 CISPEP 4 PHE H 152 PRO H 153 0 -3.47 CISPEP 5 GLU H 154 PRO H 155 0 -0.80 CISPEP 6 TRP H 194 PRO H 195 0 -1.85 SITE 1 AC1 12 PHE A 43 ALA A 44 ASP A 46 ALA A 117 SITE 2 AC1 12 VAL A 120 TYR A 123 TYR A 124 PHE A 319 SITE 3 AC1 12 SER A 320 PHE A 325 GLY A 425 NA A 603 SITE 1 AC2 3 PHE A 350 GLY A 516 TRP A 519 SITE 1 AC3 6 ALA A 44 ASP A 46 ASN A 49 SER A 320 SITE 2 AC3 6 ASN A 352 29E A 601 SITE 1 AC4 4 TYR A 69 GLN A 316 SER A 320 SER A 356 SITE 1 AC5 6 GLY A 42 VAL A 45 ASP A 46 LEU A 417 SITE 2 AC5 6 ASP A 420 SER A 421 SITE 1 AC6 6 ARG A 133 PHE A 136 ALA A 137 TYR A 219 SITE 2 AC6 6 ASP A 238 LEU A 241 SITE 1 AC7 4 LEU A 270 TYR A 273 LEU A 277 ILE A 351 CRYST1 97.288 140.641 167.818 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005959 0.00000