HEADER MEMBRANE PROTEIN 04-MAR-20 6M3Z TITLE X-RAY STRUCTURE OF A DROSOPHILA DOPAMINE TRANSPORTER WITH NET-LIKE TITLE 2 MUTATIONS (D121G/S426M/F471L) IN MILNACIPRAN BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM-DEPENDENT DOPAMINE TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN FUMIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY FRAGMENT 9D5 LIGHT CHAIN; COMPND 9 CHAIN: L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ANTIBODY FRAGMENT 9D5 HEAVY CHAIN; COMPND 13 CHAIN: H; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DAT, FMN, CG8380; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 GNTI-; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 18 ORGANISM_TAXID: 10090; SOURCE 19 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 21 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 22 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS NEUROTRANSMITTER TRANSPORTER, ANTIBODY FRAGMENT, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.SHABAREESH,A.K.MALLELA,D.JOSEPH,A.PENMATSA REVDAT 4 09-OCT-24 6M3Z 1 REMARK REVDAT 3 29-NOV-23 6M3Z 1 REMARK REVDAT 2 28-APR-21 6M3Z 1 JRNL REVDAT 1 17-FEB-21 6M3Z 0 JRNL AUTH S.PIDATHALA,A.K.MALLELA,D.JOSEPH,A.PENMATSA JRNL TITL STRUCTURAL BASIS OF NOREPINEPHRINE RECOGNITION AND TRANSPORT JRNL TITL 2 INHIBITION IN NEUROTRANSMITTER TRANSPORTERS. JRNL REF NAT COMMUN V. 12 2199 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33850134 JRNL DOI 10.1038/S41467-021-22385-9 REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 42340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5500 - 7.6502 0.99 2856 147 0.2299 0.2324 REMARK 3 2 7.6502 - 6.0759 0.99 2714 159 0.2124 0.2380 REMARK 3 3 6.0759 - 5.3089 0.99 2715 143 0.2011 0.2374 REMARK 3 4 5.3089 - 4.8240 0.99 2703 132 0.1878 0.2430 REMARK 3 5 4.8240 - 4.4785 1.00 2703 133 0.1839 0.2345 REMARK 3 6 4.4785 - 4.2146 1.00 2653 129 0.1861 0.2325 REMARK 3 7 4.2146 - 4.0037 1.00 2708 118 0.2018 0.2859 REMARK 3 8 4.0037 - 3.8295 1.00 2678 132 0.2283 0.2759 REMARK 3 9 3.8295 - 3.6821 1.00 2679 130 0.2427 0.3173 REMARK 3 10 3.6821 - 3.5551 1.00 2667 136 0.2664 0.3472 REMARK 3 11 3.5551 - 3.4439 1.00 2597 169 0.2696 0.3166 REMARK 3 12 3.4439 - 3.3455 1.00 2661 136 0.2736 0.3323 REMARK 3 13 3.3455 - 3.2575 1.00 2663 136 0.2902 0.3287 REMARK 3 14 3.2575 - 3.1780 1.00 2655 128 0.3052 0.3459 REMARK 3 15 3.1780 - 3.1100 0.98 2622 138 0.3349 0.3891 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 97.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6M3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42441 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.106 REMARK 200 RESOLUTION RANGE LOW (A) : 48.552 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 1.59500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XNX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MOPS PH 7.0, 32 PEG 600, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.49850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.12450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.79950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.12450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.49850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.79950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 135 REMARK 465 ASP H 136 REMARK 465 THR H 137 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 446 CG CD1 CD2 REMARK 470 LEU A 586 CG CD1 CD2 REMARK 470 ARG A 587 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 600 CG CD OE1 NE2 REMARK 470 SER L 169 OG REMARK 470 THR H 138 OG1 CG2 REMARK 470 VAL H 189 CG1 CG2 REMARK 470 THR H 200 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 GLC C 1 O2 GLC C 2 1.78 REMARK 500 O SER H 140 CB SER H 191 2.01 REMARK 500 OG SER A 261 O HOH A 801 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR H 123 C ALA H 124 N 0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 52 -43.25 -138.13 REMARK 500 ASN A 60 47.71 -105.01 REMARK 500 VAL A 67 -74.00 -61.48 REMARK 500 ASN A 156 53.84 -109.85 REMARK 500 PHE A 252 3.28 -69.12 REMARK 500 THR A 285 34.92 -97.04 REMARK 500 ALA A 382 78.05 -69.06 REMARK 500 VAL A 391 -55.12 -132.24 REMARK 500 PHE A 525 -63.40 -130.48 REMARK 500 ALA A 548 -130.40 55.10 REMARK 500 CYS A 562 25.46 -75.68 REMARK 500 SER A 566 6.26 -61.81 REMARK 500 SER A 567 -46.52 -131.00 REMARK 500 THR L 52 -51.31 69.26 REMARK 500 ASN L 139 73.87 55.11 REMARK 500 PRO L 142 -167.35 -78.80 REMARK 500 LYS L 170 -61.31 -124.66 REMARK 500 ARG L 212 11.27 -69.38 REMARK 500 ASN L 213 -65.25 -94.29 REMARK 500 ASP H 73 73.59 -154.28 REMARK 500 PRO H 132 -173.12 -66.18 REMARK 500 VAL H 133 73.69 -106.80 REMARK 500 SER H 140 -129.21 60.23 REMARK 500 PHE H 152 143.71 -170.37 REMARK 500 PRO H 153 -151.04 -90.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 706 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 42 O REMARK 620 2 VAL A 45 O 85.4 REMARK 620 3 LEU A 417 O 169.8 84.5 REMARK 620 4 SER A 421 OG 92.6 104.9 91.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 705 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 44 O REMARK 620 2 ASP A 46 OD1 96.0 REMARK 620 3 ASN A 49 OD1 88.5 70.7 REMARK 620 4 SER A 320 O 77.6 152.0 135.3 REMARK 620 5 SER A 320 OG 110.9 140.3 81.1 65.4 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6M0F RELATED DB: PDB REMARK 900 RELATED ID: 6M0Z RELATED DB: PDB REMARK 900 RELATED ID: 6M2R RELATED DB: PDB REMARK 900 RELATED ID: 6M38 RELATED DB: PDB DBREF 6M3Z A 25 601 UNP Q7K4Y6 DAT_DROME 25 601 DBREF 6M3Z L 1 214 PDB 6M3Z 6M3Z 1 214 DBREF 6M3Z H 1 219 PDB 6M3Z 6M3Z 1 219 SEQADV 6M3Z ALA A 74 UNP Q7K4Y6 VAL 74 ENGINEERED MUTATION SEQADV 6M3Z GLY A 121 UNP Q7K4Y6 ASP 121 ENGINEERED MUTATION SEQADV 6M3Z A UNP Q7K4Y6 SER 162 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLN 163 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASN 164 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ALA 165 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 166 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ARG 167 DELETION SEQADV 6M3Z A UNP Q7K4Y6 VAL 168 DELETION SEQADV 6M3Z A UNP Q7K4Y6 PRO 169 DELETION SEQADV 6M3Z A UNP Q7K4Y6 VAL 170 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ILE 171 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLY 172 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASN 173 DELETION SEQADV 6M3Z A UNP Q7K4Y6 TYR 174 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 175 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASP 176 DELETION SEQADV 6M3Z A UNP Q7K4Y6 LEU 177 DELETION SEQADV 6M3Z A UNP Q7K4Y6 TYR 178 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ALA 179 DELETION SEQADV 6M3Z A UNP Q7K4Y6 MET 180 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLY 181 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASN 182 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLN 183 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 184 DELETION SEQADV 6M3Z A UNP Q7K4Y6 LEU 185 DELETION SEQADV 6M3Z A UNP Q7K4Y6 LEU 186 DELETION SEQADV 6M3Z A UNP Q7K4Y6 TYR 187 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASN 188 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLU 189 DELETION SEQADV 6M3Z A UNP Q7K4Y6 THR 190 DELETION SEQADV 6M3Z A UNP Q7K4Y6 TYR 191 DELETION SEQADV 6M3Z A UNP Q7K4Y6 MET 192 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASN 193 DELETION SEQADV 6M3Z A UNP Q7K4Y6 GLY 194 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 195 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 196 DELETION SEQADV 6M3Z A UNP Q7K4Y6 LEU 197 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ASP 198 DELETION SEQADV 6M3Z A UNP Q7K4Y6 THR 199 DELETION SEQADV 6M3Z A UNP Q7K4Y6 SER 200 DELETION SEQADV 6M3Z A UNP Q7K4Y6 ALA 201 DELETION SEQADV 6M3Z A UNP Q7K4Y6 VAL 202 DELETION SEQADV 6M3Z ALA A 415 UNP Q7K4Y6 LEU 415 ENGINEERED MUTATION SEQADV 6M3Z MET A 426 UNP Q7K4Y6 SER 426 ENGINEERED MUTATION SEQADV 6M3Z LEU A 471 UNP Q7K4Y6 PHE 471 ENGINEERED MUTATION SEQRES 1 A 536 ASP GLU ARG GLU THR TRP SER GLY LYS VAL ASP PHE LEU SEQRES 2 A 536 LEU SER VAL ILE GLY PHE ALA VAL ASP LEU ALA ASN VAL SEQRES 3 A 536 TRP ARG PHE PRO TYR LEU CYS TYR LYS ASN GLY GLY GLY SEQRES 4 A 536 ALA PHE LEU VAL PRO TYR GLY ILE MET LEU ALA VAL GLY SEQRES 5 A 536 GLY ILE PRO LEU PHE TYR MET GLU LEU ALA LEU GLY GLN SEQRES 6 A 536 HIS ASN ARG LYS GLY ALA ILE THR CYS TRP GLY ARG LEU SEQRES 7 A 536 VAL PRO LEU PHE LYS GLY ILE GLY TYR ALA VAL VAL LEU SEQRES 8 A 536 ILE ALA PHE TYR VAL GLY PHE TYR TYR ASN VAL ILE ILE SEQRES 9 A 536 ALA TRP SER LEU ARG PHE PHE PHE ALA SER PHE THR ASN SEQRES 10 A 536 SER LEU PRO TRP THR SER CYS ASN ASN ILE TRP ASN THR SEQRES 11 A 536 PRO ASN CYS ARG PRO PHE GLU GLY HIS VAL GLU GLY PHE SEQRES 12 A 536 GLN SER ALA ALA SER GLU TYR PHE ASN ARG TYR ILE LEU SEQRES 13 A 536 GLU LEU ASN ARG SER GLU GLY ILE HIS ASP LEU GLY ALA SEQRES 14 A 536 ILE LYS TRP ASP MET ALA LEU CYS LEU LEU ILE VAL TYR SEQRES 15 A 536 LEU ILE CYS TYR PHE SER LEU TRP LYS GLY ILE SER THR SEQRES 16 A 536 SER GLY LYS VAL VAL TRP PHE THR ALA LEU PHE PRO TYR SEQRES 17 A 536 ALA VAL LEU LEU ILE LEU LEU ILE ARG GLY LEU THR LEU SEQRES 18 A 536 PRO GLY SER PHE LEU GLY ILE GLN TYR TYR LEU THR PRO SEQRES 19 A 536 ASN PHE SER ALA ILE TYR LYS ALA GLU VAL TRP VAL ASP SEQRES 20 A 536 ALA ALA THR GLN VAL PHE PHE SER LEU GLY PRO GLY PHE SEQRES 21 A 536 GLY VAL LEU LEU ALA TYR ALA SER TYR ASN LYS TYR HIS SEQRES 22 A 536 ASN ASN VAL TYR LYS ASP ALA LEU LEU THR SER PHE ILE SEQRES 23 A 536 ASN SER ALA THR SER PHE ILE ALA GLY PHE VAL ILE PHE SEQRES 24 A 536 SER VAL LEU GLY TYR MET ALA HIS THR LEU GLY VAL ARG SEQRES 25 A 536 ILE GLU ASP VAL ALA THR GLU GLY PRO GLY LEU VAL PHE SEQRES 26 A 536 VAL VAL TYR PRO ALA ALA ILE ALA THR MET PRO ALA SER SEQRES 27 A 536 THR PHE TRP ALA LEU ILE PHE PHE MET MET LEU ALA THR SEQRES 28 A 536 LEU GLY LEU ASP SER SER PHE GLY GLY MET GLU ALA ILE SEQRES 29 A 536 ILE THR ALA LEU SER ASP GLU PHE PRO LYS ILE LYS ARG SEQRES 30 A 536 ASN ARG GLU LEU PHE VAL ALA GLY LEU PHE SER LEU TYR SEQRES 31 A 536 PHE VAL VAL GLY LEU ALA SER CYS THR GLN GLY GLY PHE SEQRES 32 A 536 TYR PHE LEU HIS LEU LEU ASP ARG TYR ALA ALA GLY TYR SEQRES 33 A 536 SER ILE LEU VAL ALA VAL PHE PHE GLU ALA ILE ALA VAL SEQRES 34 A 536 SER TRP ILE TYR GLY THR ASN ARG PHE SER GLU ASP ILE SEQRES 35 A 536 ARG ASP MET ILE GLY PHE PRO PRO GLY ARG TYR TRP GLN SEQRES 36 A 536 VAL CYS TRP ARG PHE VAL ALA PRO ILE PHE LEU LEU PHE SEQRES 37 A 536 ILE THR VAL TYR GLY LEU ILE GLY TYR GLU PRO LEU THR SEQRES 38 A 536 TYR ALA ASP TYR VAL TYR PRO SER TRP ALA ASN ALA LEU SEQRES 39 A 536 GLY TRP CYS ILE ALA GLY SER SER VAL VAL MET ILE PRO SEQRES 40 A 536 ALA VAL ALA ILE PHE LYS LEU LEU SER THR PRO GLY SER SEQRES 41 A 536 LEU ARG GLN ARG PHE THR ILE LEU THR THR PRO TRP ARG SEQRES 42 A 536 ASP GLN GLN SEQRES 1 L 214 GLU ASN VAL LEU THR GLN SER PRO ALA ILE MET SER THR SEQRES 2 L 214 SER PRO GLY GLU LYS VAL THR MET THR CYS ARG ALA SER SEQRES 3 L 214 SER SER VAL GLY SER SER TYR LEU HIS TRP TYR GLN GLN SEQRES 4 L 214 LYS SER GLY ALA SER PRO LYS LEU TRP ILE TYR SER THR SEQRES 5 L 214 SER ASN LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SEQRES 6 L 214 SER GLY SER GLY THR SER TYR SER LEU THR ILE SER SER SEQRES 7 L 214 VAL GLU ALA GLU ASP ALA ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 214 PHE SER GLY TYR PRO LEU THR PHE GLY SER GLY THR LYS SEQRES 9 L 214 LEU GLU MET LYS ARG ALA ASP ALA ALA PRO THR VAL SER SEQRES 10 L 214 ILE PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY SEQRES 11 L 214 ALA SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS SEQRES 12 L 214 ASP ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG SEQRES 13 L 214 GLN ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER SEQRES 14 L 214 LYS ASP SER THR TYR SER MET SER SER THR LEU THR LEU SEQRES 15 L 214 THR LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS SEQRES 16 L 214 GLU ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SEQRES 17 L 214 SER PHE ASN ARG ASN GLU SEQRES 1 H 219 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 219 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 219 PHE THR PHE SER SER TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 H 219 SER PRO GLU LYS ARG LEU GLU TRP VAL ALA GLU ILE SER SEQRES 5 H 219 SER GLY GLY ARG TYR ILE TYR TYR SER ASP THR VAL THR SEQRES 6 H 219 GLY ARG PHE THR ILE SER ARG ASP ASN ALA ARG ASN ILE SEQRES 7 H 219 LEU HIS LEU GLU MET SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 219 ALA MET TYR TYR CYS ALA ARG GLY GLU VAL ARG GLN ARG SEQRES 9 H 219 GLY PHE ASP TYR TRP GLY GLN GLY THR THR LEU THR VAL SEQRES 10 H 219 SER SER ALA LYS THR THR ALA PRO SER VAL TYR PRO LEU SEQRES 11 H 219 ALA PRO VAL CYS GLY ASP THR THR GLY SER SER VAL THR SEQRES 12 H 219 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 219 THR LEU THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 219 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 219 LEU SER SER SER VAL THR VAL THR SER SER THR TRP PRO SEQRES 16 H 219 SER GLN SER ILE THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 219 SER THR LYS VAL ASP LYS LYS ILE GLU PRO ARG HET GLC B 1 12 HET GLC B 2 11 HET GLC C 1 12 HET GLC C 2 11 HET F0F A 701 18 HET GOL A 702 6 HET D10 A 703 10 HET CL A 704 1 HET NA A 705 1 HET NA A 706 1 HET Y01 A 707 35 HET CLR A 710 28 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM F0F (1R,2S)-2-(AMINOMETHYL)-N,N-DIETHYL-1-PHENYL- HETNAM 2 F0F CYCLOPROPANE-1-CARBOXAMIDE HETNAM GOL GLYCEROL HETNAM D10 DECANE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM Y01 CHOLESTEROL HEMISUCCINATE HETNAM CLR CHOLESTEROL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GLC 4(C6 H12 O6) FORMUL 6 F0F C15 H22 N2 O FORMUL 7 GOL C3 H8 O3 FORMUL 8 D10 C10 H22 FORMUL 9 CL CL 1- FORMUL 10 NA 2(NA 1+) FORMUL 12 Y01 C31 H50 O4 FORMUL 13 CLR C27 H46 O FORMUL 14 HOH *20(H2 O) HELIX 1 AA1 GLY A 32 VAL A 45 1 14 HELIX 2 AA2 LEU A 47 ARG A 52 1 6 HELIX 3 AA3 ARG A 52 ASN A 60 1 9 HELIX 4 AA4 GLY A 61 ALA A 64 5 4 HELIX 5 AA5 PHE A 65 GLY A 76 1 12 HELIX 6 AA6 GLY A 76 ARG A 92 1 17 HELIX 7 AA7 GLY A 94 VAL A 103 1 10 HELIX 8 AA8 PRO A 104 PHE A 106 5 3 HELIX 9 AA9 LYS A 107 ASN A 125 1 19 HELIX 10 AB1 ASN A 125 PHE A 136 1 12 HELIX 11 AB2 LEU A 143 SER A 147 5 5 HELIX 12 AB3 ALA A 211 TYR A 219 1 9 HELIX 13 AB4 GLU A 222 SER A 226 5 5 HELIX 14 AB5 LYS A 236 TRP A 255 1 20 HELIX 15 AB6 GLY A 257 ALA A 269 1 13 HELIX 16 AB7 LEU A 270 THR A 285 1 16 HELIX 17 AB8 GLY A 288 THR A 298 1 11 HELIX 18 AB9 ASN A 300 TYR A 305 5 6 HELIX 19 AC1 LYS A 306 GLY A 322 1 17 HELIX 20 AC2 GLY A 326 TYR A 334 1 9 HELIX 21 AC3 ASN A 340 LEU A 374 1 35 HELIX 22 AC4 ARG A 377 VAL A 381 5 5 HELIX 23 AC5 GLY A 385 VAL A 391 1 7 HELIX 24 AC6 VAL A 391 ALA A 398 1 8 HELIX 25 AC7 ALA A 402 ASP A 435 1 34 HELIX 26 AC8 PHE A 437 ASN A 443 1 7 HELIX 27 AC9 ASN A 443 GLY A 459 1 17 HELIX 28 AD1 LEU A 460 THR A 464 5 5 HELIX 29 AD2 GLY A 466 ALA A 478 1 13 HELIX 30 AD3 GLY A 480 TRP A 496 1 17 HELIX 31 AD4 GLY A 499 GLY A 512 1 14 HELIX 32 AD5 GLY A 516 PHE A 525 1 10 HELIX 33 AD6 PHE A 525 GLY A 541 1 17 HELIX 34 AD7 PRO A 553 VAL A 569 1 17 HELIX 35 AD8 VAL A 569 LEU A 580 1 12 HELIX 36 AD9 SER A 585 LEU A 593 1 9 HELIX 37 AE1 GLY L 30 SER L 32 5 3 HELIX 38 AE2 GLU L 80 ALA L 84 5 5 HELIX 39 AE3 SER L 122 SER L 128 1 7 HELIX 40 AE4 THR L 183 GLU L 188 1 6 HELIX 41 AE5 THR H 28 TYR H 32 5 5 HELIX 42 AE6 ARG H 87 THR H 91 5 5 HELIX 43 AE7 VAL H 101 GLY H 105 5 5 HELIX 44 AE8 SER H 162 SER H 164 5 3 HELIX 45 AE9 PRO H 206 SER H 209 5 4 SHEET 1 AA1 2 CYS A 157 ARG A 158 0 SHEET 2 AA1 2 GLN A 209 SER A 210 1 O GLN A 209 N ARG A 158 SHEET 1 AA2 2 THR A 546 TYR A 547 0 SHEET 2 AA2 2 TYR A 550 VAL A 551 -1 O TYR A 550 N TYR A 547 SHEET 1 AA3 3 LEU L 4 SER L 7 0 SHEET 2 AA3 3 VAL L 19 VAL L 29 -1 O THR L 22 N SER L 7 SHEET 3 AA3 3 PHE L 63 ILE L 76 -1 O GLY L 69 N VAL L 29 SHEET 1 AA4 6 ILE L 10 THR L 13 0 SHEET 2 AA4 6 THR L 103 MET L 107 1 O LYS L 104 N MET L 11 SHEET 3 AA4 6 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 103 SHEET 4 AA4 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AA4 6 LYS L 46 TYR L 50 -1 O ILE L 49 N TRP L 36 SHEET 6 AA4 6 ASN L 54 LEU L 55 -1 O ASN L 54 N TYR L 50 SHEET 1 AA5 4 ILE L 10 THR L 13 0 SHEET 2 AA5 4 THR L 103 MET L 107 1 O LYS L 104 N MET L 11 SHEET 3 AA5 4 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 103 SHEET 4 AA5 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 91 SHEET 1 AA6 4 THR L 115 PHE L 119 0 SHEET 2 AA6 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AA6 4 TYR L 174 LEU L 182 -1 O SER L 178 N CYS L 135 SHEET 4 AA6 4 VAL L 160 TRP L 164 -1 N SER L 163 O SER L 177 SHEET 1 AA7 4 SER L 154 ARG L 156 0 SHEET 2 AA7 4 ASN L 146 ILE L 151 -1 N TRP L 149 O ARG L 156 SHEET 3 AA7 4 SER L 192 THR L 198 -1 O GLU L 196 N LYS L 148 SHEET 4 AA7 4 ILE L 206 ASN L 211 -1 O ILE L 206 N ALA L 197 SHEET 1 AA8 4 GLN H 3 SER H 7 0 SHEET 2 AA8 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA8 4 ILE H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA8 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA9 6 LEU H 11 VAL H 12 0 SHEET 2 AA9 6 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AA9 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AA9 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA9 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA9 6 ILE H 58 TYR H 60 -1 O TYR H 59 N GLU H 50 SHEET 1 AB1 4 LEU H 11 VAL H 12 0 SHEET 2 AB1 4 THR H 113 VAL H 117 1 O THR H 116 N VAL H 12 SHEET 3 AB1 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 113 SHEET 4 AB1 4 TYR H 108 TRP H 109 -1 O TYR H 108 N ARG H 98 SHEET 1 AB2 4 SER H 126 LEU H 130 0 SHEET 2 AB2 4 SER H 141 TYR H 151 -1 O LEU H 147 N TYR H 128 SHEET 3 AB2 4 LEU H 180 THR H 190 -1 O LEU H 183 N VAL H 148 SHEET 4 AB2 4 VAL H 169 THR H 171 -1 N HIS H 170 O SER H 186 SHEET 1 AB3 4 SER H 126 LEU H 130 0 SHEET 2 AB3 4 SER H 141 TYR H 151 -1 O LEU H 147 N TYR H 128 SHEET 3 AB3 4 LEU H 180 THR H 190 -1 O LEU H 183 N VAL H 148 SHEET 4 AB3 4 VAL H 175 GLN H 177 -1 N VAL H 175 O THR H 182 SHEET 1 AB4 3 THR H 157 TRP H 160 0 SHEET 2 AB4 3 THR H 200 HIS H 205 -1 O ALA H 204 N THR H 157 SHEET 3 AB4 3 THR H 210 LYS H 215 -1 O THR H 210 N HIS H 205 SSBOND 1 CYS A 148 CYS A 157 1555 1555 2.06 SSBOND 2 CYS L 23 CYS L 89 1555 1555 2.08 SSBOND 3 CYS L 135 CYS L 195 1555 1555 2.05 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 5 CYS H 146 CYS H 201 1555 1555 2.05 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.43 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.43 LINK O GLY A 42 NA NA A 706 1555 1555 2.37 LINK O ALA A 44 NA NA A 705 1555 1555 2.50 LINK O VAL A 45 NA NA A 706 1555 1555 2.42 LINK OD1 ASP A 46 NA NA A 705 1555 1555 3.00 LINK OD1 ASN A 49 NA NA A 705 1555 1555 2.74 LINK O SER A 320 NA NA A 705 1555 1555 2.56 LINK OG SER A 320 NA NA A 705 1555 1555 2.96 LINK O LEU A 417 NA NA A 706 1555 1555 2.36 LINK OG SER A 421 NA NA A 706 1555 1555 2.62 CISPEP 1 SER L 7 PRO L 8 0 1.32 CISPEP 2 TYR L 95 PRO L 96 0 0.11 CISPEP 3 TYR L 141 PRO L 142 0 0.84 CISPEP 4 PHE H 152 PRO H 153 0 -9.07 CISPEP 5 GLU H 154 PRO H 155 0 -2.08 CISPEP 6 TRP H 194 PRO H 195 0 -4.82 CRYST1 96.997 141.599 168.249 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010310 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007062 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005944 0.00000