HEADER SIGNALING PROTEIN 22-AUG-18 6M8O TITLE CRYSTAL STRUCTURE OF THE RECEIVER DOMAIN OF LYTR FROM STAPHYLOCOCCUS TITLE 2 AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING RESPONSE REGULATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESPONSE REGULATORY DOMAIN, RESIDUES 1-134; COMPND 5 SYNONYM: SENSORY TRANSDUCTION PROTEIN LYTR,TWO-COMPONENT RESPONSE COMPND 6 REGULATOR; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: C3B39_09020, EP54_06415, EQ90_12235, HMPREF3211_02791; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TWO-COMPONENT SYSTEM, RESPONSE REGULATOR, RECEIVER DOMAIN, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SHALA-LAWRENCE,G.F.AUDETTE REVDAT 3 11-OCT-23 6M8O 1 REMARK REVDAT 2 08-JAN-20 6M8O 1 REMARK REVDAT 1 19-SEP-18 6M8O 0 JRNL AUTH A.SHALA-LAWRENCE,G.F.AUDETTE JRNL TITL CRYSTAL STRUCTURE OF THE RECEIVER DOMAIN OF LYTR FROM JRNL TITL 2 STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.SHALA,K.H.PATEL,D.GOLEMI-KOTRA,G.F.AUDETTE REMARK 1 TITL EXPRESSION, PURIFICATION, CRYSTALLIZATION AND PRELIMINARY REMARK 1 TITL 2 X-RAY ANALYSIS OF THE RECEIVER DOMAIN OF STAPHYLOCOCCUS REMARK 1 TITL 3 AUREUS LYTR PROTEIN. REMARK 1 REF ACTA CRYSTALLOGR. SECT. F V. 69 1418 2013 REMARK 1 REF 2 STRUCT. BIOL. CRYST. COMMUN. REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 24316844 REMARK 1 DOI 10.1107/S1744309113030972 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 834 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 80.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 91.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.05000 REMARK 3 B22 (A**2) : 2.05000 REMARK 3 B33 (A**2) : -6.66000 REMARK 3 B12 (A**2) : 1.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.513 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 947 ; 0.022 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 878 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1282 ; 2.306 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2052 ; 1.278 ; 1.634 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 117 ; 7.466 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;34.986 ;26.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 171 ;18.895 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;15.048 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 131 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1050 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 158 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 471 ; 5.390 ; 6.565 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 470 ; 5.253 ; 6.562 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 587 ; 7.396 ; 9.832 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 588 ; 7.392 ; 9.840 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 475 ; 6.407 ; 7.142 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 471 ; 5.971 ; 7.126 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 689 ; 8.386 ;10.443 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1048 ; 9.102 ;78.277 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1049 ; 9.107 ;78.345 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 8 REMARK 3 RESIDUE RANGE : A 26 A 33 REMARK 3 RESIDUE RANGE : A 48 A 53 REMARK 3 RESIDUE RANGE : A 76 A 81 REMARK 3 RESIDUE RANGE : A 96 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3515 58.4592 2.0833 REMARK 3 T TENSOR REMARK 3 T11: 0.3045 T22: 0.0898 REMARK 3 T33: 0.0118 T12: 0.1214 REMARK 3 T13: -0.0291 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 4.6803 L22: 11.4640 REMARK 3 L33: 5.8579 L12: 1.4960 REMARK 3 L13: 0.3220 L23: 1.7629 REMARK 3 S TENSOR REMARK 3 S11: 0.0594 S12: -0.2108 S13: -0.0663 REMARK 3 S21: -0.1584 S22: -0.0628 S23: 0.2130 REMARK 3 S31: 0.2762 S32: 0.0567 S33: 0.0033 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 25 REMARK 3 ORIGIN FOR THE GROUP (A): -2.0753 53.7891 10.2062 REMARK 3 T TENSOR REMARK 3 T11: 0.3184 T22: 0.2261 REMARK 3 T33: 0.2255 T12: 0.0540 REMARK 3 T13: -0.0533 T23: 0.0579 REMARK 3 L TENSOR REMARK 3 L11: 5.5205 L22: 6.7736 REMARK 3 L33: 7.1726 L12: -2.3578 REMARK 3 L13: -5.8423 L23: 3.2817 REMARK 3 S TENSOR REMARK 3 S11: 0.3809 S12: -0.5539 S13: -0.1086 REMARK 3 S21: 0.0391 S22: -0.1061 S23: -0.1371 REMARK 3 S31: -0.1543 S32: 0.5098 S33: -0.2748 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 47 REMARK 3 RESIDUE RANGE : A 54 A 75 REMARK 3 RESIDUE RANGE : A 82 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2313 60.1599 -7.1658 REMARK 3 T TENSOR REMARK 3 T11: 0.3256 T22: 0.2251 REMARK 3 T33: 0.0257 T12: 0.0568 REMARK 3 T13: 0.0172 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 1.0027 L22: 11.4384 REMARK 3 L33: 6.2887 L12: 1.1562 REMARK 3 L13: -0.0161 L23: 1.6394 REMARK 3 S TENSOR REMARK 3 S11: -0.0498 S12: 0.4351 S13: 0.0456 REMARK 3 S21: -0.7671 S22: 0.0751 S23: -0.0411 REMARK 3 S31: 0.3206 S32: 0.2219 S33: -0.0253 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): -6.2955 65.5324 9.5960 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.2141 REMARK 3 T33: 0.1660 T12: 0.0786 REMARK 3 T13: -0.0022 T23: -0.0610 REMARK 3 L TENSOR REMARK 3 L11: 6.7083 L22: 4.1988 REMARK 3 L33: 7.8230 L12: 2.0252 REMARK 3 L13: 3.5887 L23: -1.3764 REMARK 3 S TENSOR REMARK 3 S11: -0.0391 S12: -0.4496 S13: 0.1866 REMARK 3 S21: -0.0033 S22: -0.1360 S23: 0.2506 REMARK 3 S31: -0.2062 S32: -0.3951 S33: 0.1751 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2838 56.3952 0.7606 REMARK 3 T TENSOR REMARK 3 T11: 0.4675 T22: 0.4392 REMARK 3 T33: 0.4701 T12: 0.0362 REMARK 3 T13: 0.0499 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 355.3754 L22: 254.2541 REMARK 3 L33: 411.5566 L12: 42.2811 REMARK 3 L13: -73.5290 L23: -18.4443 REMARK 3 S TENSOR REMARK 3 S11: -0.6256 S12: -1.0256 S13: -4.1826 REMARK 3 S21: -0.9886 S22: 2.9153 S23: 1.2083 REMARK 3 S31: -3.3751 S32: 2.3084 S33: -2.2897 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7806 61.8737 -0.1551 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.1146 REMARK 3 T33: 0.1275 T12: 0.1115 REMARK 3 T13: -0.0493 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.0576 L22: 1.1234 REMARK 3 L33: 8.6433 L12: 0.0088 REMARK 3 L13: -0.6087 L23: 1.4491 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: 0.0033 S13: -0.0070 REMARK 3 S21: 0.3913 S22: 0.0697 S23: -0.1664 REMARK 3 S31: 0.2621 S32: 0.1287 S33: -0.0921 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6M8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12211 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.90 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 21.50 REMARK 200 R MERGE FOR SHELL (I) : 2.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 2QVO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES (PH 6.5), 1.6 M MAGNESIUM REMARK 280 SULFATE HEPTAHYDRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.43467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.86933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 78.65200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 131.08667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.21733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.43467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 104.86933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 131.08667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 78.65200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.21733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 146.78611 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 119 REMARK 465 ALA A 120 REMARK 465 LYS A 121 REMARK 465 ASP A 122 REMARK 465 ASP A 123 REMARK 465 ASN A 124 REMARK 465 ASN A 125 REMARK 465 ALA A 126 REMARK 465 SER A 127 REMARK 465 ALA A 128 REMARK 465 ILE A 129 REMARK 465 ALA A 130 REMARK 465 ASN A 131 REMARK 465 ASP A 132 REMARK 465 MET A 133 REMARK 465 SER A 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ARG A 116 CD NE CZ NH1 NH2 REMARK 470 THR A 118 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 57 -101.02 51.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 DBREF 6M8O A 1 134 UNP W8UTS7 W8UTS7_STAAU 1 134 SEQRES 1 A 134 MET LYS ALA LEU ILE ILE ASP ASP GLU PRO LEU ALA ARG SEQRES 2 A 134 ASN GLU LEU THR TYR LEU LEU ASN GLU ILE GLY GLY PHE SEQRES 3 A 134 GLU GLU ILE ASN GLU ALA GLU ASN VAL LYS GLU THR LEU SEQRES 4 A 134 GLU ALA LEU LEU ILE ASN GLN TYR ASP ILE ILE PHE LEU SEQRES 5 A 134 ASP VAL ASN LEU MET ASP GLU ASN GLY ILE GLU LEU GLY SEQRES 6 A 134 ALA LYS ILE GLN LYS MET LYS GLU PRO PRO ALA ILE ILE SEQRES 7 A 134 PHE ALA THR ALA HIS ASP GLN TYR ALA VAL GLN ALA PHE SEQRES 8 A 134 GLU LEU ASN ALA THR ASP TYR ILE LEU LYS PRO PHE GLY SEQRES 9 A 134 GLN LYS ARG ILE GLU GLN ALA VAL ASN LYS VAL ARG ALA SEQRES 10 A 134 THR LYS ALA LYS ASP ASP ASN ASN ALA SER ALA ILE ALA SEQRES 11 A 134 ASN ASP MET SER HET SO4 A 201 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *13(H2 O) HELIX 1 AA1 GLU A 9 GLY A 24 1 16 HELIX 2 AA2 ASN A 34 ASN A 45 1 12 HELIX 3 AA3 GLY A 61 GLN A 69 1 9 HELIX 4 AA4 TYR A 86 LEU A 93 1 8 HELIX 5 AA5 GLY A 104 ARG A 116 1 13 SHEET 1 AA1 5 GLU A 28 ALA A 32 0 SHEET 2 AA1 5 LYS A 2 ILE A 6 1 N ILE A 5 O ASN A 30 SHEET 3 AA1 5 ILE A 49 LEU A 52 1 O PHE A 51 N ILE A 6 SHEET 4 AA1 5 ALA A 76 THR A 81 1 O ILE A 78 N LEU A 52 SHEET 5 AA1 5 ASP A 97 LEU A 100 1 O ILE A 99 N PHE A 79 SHEET 1 AA2 2 ASN A 55 LEU A 56 0 SHEET 2 AA2 2 GLU A 59 ASN A 60 -1 O GLU A 59 N LEU A 56 CISPEP 1 LYS A 101 PRO A 102 0 2.02 SITE 1 AC1 3 ASP A 8 ASN A 55 HIS A 83 CRYST1 84.747 84.747 157.304 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011800 0.006813 0.000000 0.00000 SCALE2 0.000000 0.013625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006357 0.00000